CSPI03G07040 (gene) Wild cucumber (PI 183967)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GGGGGGGAGGGGATCTTTCTTTTTCTTTGTTTGTTTGGCATTTGGTTTTTGCTTTTGCTTTGCTTTCTTGGGATCACTTTCCTTGGTATAATCATAGTGAGAAAGACGAATAATGGAAACTGGAACCCAGACCCAAAGATCATCAGGGAGAGGGGAGGATTATGAAGTTCAAGTGTCGTTCCACCTCTCAAATGATCCACACCACATCCACGAAATGGGATTTGTGCAGTTGGAAGAGCACAGCCAGGTTTTGAGCTTCTTGGCACCCAACAACAACAACAACGCCACCAATATGCCACCTCCTCCCTTTACTACTACTTCTCCTCACTCCAACATCCTCCCTCGACCACCTTCTTGGACTAATCACCAGGTACTAACTACACTAACTACTAACTACTATTACTATTAATTTGCTCACCTTTTTTCTACTCGATTAATATACATGTATTAAGTTGTCATCCACTAATTCCTATCAGCTGCCCGGAACACTGGATCCCAAGCCCGGTAACGATGAAAACTGCACGGCTACTGCTACTGATGCCACCAATTCATGGTATACACAAATACAACAAAACCCTAATTATTACATATTGTTTGCACGTACAGTGATTGAGTTAGGTAGGAATGAATTAATATGAATATATACATGATCATGCTCTTAATTTGCACTGCAGGTGGAGAAACACAAACGCCGATAAGAGTAAGGTGAAGGTAAGGAGAAAGCTGAGAGAGCCACGTTTCTGTTTTCAGACAAGAAGCGATGTTGATGTGCTGGACGATGGCTATAAATGGAGAAAATATGGCCAAAAAGTTGTCAAGAACAGCCTTCATCCTAGGTACTACCCATCCTTACCTCCTTTTCCGATCCTCCTCCTCCTCCTCTTCTTCTTCTTTCTTTTAATATATATCACATCCTTCTCTCGCATCGCATGCACCAGTAATGCCACCCAAACCCTTATGTTCTTTGCTAATATAACATCCACCATTCACTTTTCAATTATATCATCACTTCTCTCCCAATATCCCTACCCTAATTTTGAATTTAATTTATCTATACTACTTTAGCTTCTTCATGATGGCATATTAATTTCATGCATCATCAAGTCTCCTTGCTATTTTGATATCGAAATGAGATTAACTATTTTTTTTTATCTAGATTCACGAGTGTAGAATAGAACTAATTATTTTTTTTATCTAGATTCACGAGTGTAGAATAGAACCGATTAAAGTTGTATGAAATGTTGGGAGAGATTGATTAGTTATGATGCAAATTAAGGCATACGGATTATTGTCATAAGTTGCATTGCATTGTATGTGTGTATGTATGTATATATGTATAGCATATATGTATTATCACGAGTTGTTGATGATGCGCGAGAGAGAGAGGTTAAAATGAGAAAATGCACGAATGGAATGATCAAACAATTGATTAGTTAGTATAGAAAATAGATATACATATACATGTACATGTACATGTATGTAAAGAGAGAGGATATAATAATTAGGAGAAAGGGAAGTGAAGAGGGGTTTTGGGGGTTTGGGTAGTTCACAGTTCAGTTTCAGTAGTAGGCAGATTGGGAATGATTATGTTATATTCTCTTCACCAGTGCCATCATTATTGATTTGGGGATTTTGGTTATAGGTGGCCGCCCCCCCAAGGCCAAGGCCCAGAACAACTACCAGTCATCCACACACACACACACACACACACATATATACCTATATTCTTCTATTTCTAATTTTGACTACTTTTTCTTTACTCTCTGCACAACACAACAACATATCCATTCATTTCATTTTTGTTTCTATGGTGATTTAATATGCGAAGGTAGGATGAGAACAAATAATAATAGTCAAGGGTTAAATAATGATAGTGATTAATAATTTGCAGAAGCTACTATCGTTGCACGCATAGCAACTGCCGAGTGAAGAAGAGGGTAGAGCGACTGTCGGAGGATTGCCGGATGGTGATAACCACTTACGAAGGTAGACACAACCACACTCCTTGTGATGACTCCAATTCTTCGGAGCACGAACCCTTTACATCCTTCTGACTTCCGGCTCATTAATTCCCCAACTCCCAATAACTTTTTTTTTTTTTTTATATATATATATATAATATATATAATTTTCTTTTTACATCCCTGCCTTCCCTAATTTCATTTCCCCCTTTCCTTTCTTAATTTCCCTTTTCATTGCAGCTTGTATAATTATTATTATTATTATTATTATTATTTCTTTCACTTTTTAAGCAAAAT ATGGAAACTGGAACCCAGACCCAAAGATCATCAGGGAGAGGGGAGGATTATGAAGTTCAAGTGTCGTTCCACCTCTCAAATGATCCACACCACATCCACGAAATGGGATTTGTGCAGTTGGAAGAGCACAGCCAGGTTTTGAGCTTCTTGGCACCCAACAACAACAACAACGCCACCAATATGCCACCTCCTCCCTTTACTACTACTTCTCCTCACTCCAACATCCTCCCTCGACCACCTTCTTGGACTAATCACCAGCTGCCCGGAACACTGGATCCCAAGCCCGGTAACGATGAAAACTGCACGGCTACTGCTACTGATGCCACCAATTCATGGTGGAGAAACACAAACGCCGATAAGAGTAAGGTGAAGGTAAGGAGAAAGCTGAGAGAGCCACGTTTCTGTTTTCAGACAAGAAGCGATGTTGATGTGCTGGACGATGGCTATAAATGGAGAAAATATGGCCAAAAAGTTGTCAAGAACAGCCTTCATCCTAGAAGCTACTATCGTTGCACGCATAGCAACTGCCGAGTGAAGAAGAGGGTAGAGCGACTGTCGGAGGATTGCCGGATGGTGATAACCACTTACGAAGGTAGACACAACCACACTCCTTGTGATGACTCCAATTCTTCGGAGCACGAACCCTTTACATCCTTCTGA ATGGAAACTGGAACCCAGACCCAAAGATCATCAGGGAGAGGGGAGGATTATGAAGTTCAAGTGTCGTTCCACCTCTCAAATGATCCACACCACATCCACGAAATGGGATTTGTGCAGTTGGAAGAGCACAGCCAGGTTTTGAGCTTCTTGGCACCCAACAACAACAACAACGCCACCAATATGCCACCTCCTCCCTTTACTACTACTTCTCCTCACTCCAACATCCTCCCTCGACCACCTTCTTGGACTAATCACCAGCTGCCCGGAACACTGGATCCCAAGCCCGGTAACGATGAAAACTGCACGGCTACTGCTACTGATGCCACCAATTCATGGTGGAGAAACACAAACGCCGATAAGAGTAAGGTGAAGGTAAGGAGAAAGCTGAGAGAGCCACGTTTCTGTTTTCAGACAAGAAGCGATGTTGATGTGCTGGACGATGGCTATAAATGGAGAAAATATGGCCAAAAAGTTGTCAAGAACAGCCTTCATCCTAGAAGCTACTATCGTTGCACGCATAGCAACTGCCGAGTGAAGAAGAGGGTAGAGCGACTGTCGGAGGATTGCCGGATGGTGATAACCACTTACGAAGGTAGACACAACCACACTCCTTGTGATGACTCCAATTCTTCGGAGCACGAACCCTTTACATCCTTCTGA
BLAST of CSPI03G07040 vs. Swiss-Prot
Match: WRK12_ARATH (Probable WRKY transcription factor 12 OS=Arabidopsis thaliana GN=WRKY12 PE=2 SV=1) HSP 1 Score: 202.2 bits (513), Expect = 5.8e-51 Identity = 112/192 (58.33%), Postives = 137/192 (71.35%), Query Frame = 1
BLAST of CSPI03G07040 vs. Swiss-Prot
Match: WRK13_ARATH (Probable WRKY transcription factor 13 OS=Arabidopsis thaliana GN=WRKY13 PE=2 SV=1) HSP 1 Score: 151.0 bits (380), Expect = 1.5e-35 Identity = 73/104 (70.19%), Postives = 85/104 (81.73%), Query Frame = 1
BLAST of CSPI03G07040 vs. Swiss-Prot
Match: WRK43_ARATH (Probable WRKY transcription factor 43 OS=Arabidopsis thaliana GN=WRKY43 PE=1 SV=1) HSP 1 Score: 121.3 bits (303), Expect = 1.3e-26 Identity = 53/81 (65.43%), Postives = 68/81 (83.95%), Query Frame = 1
BLAST of CSPI03G07040 vs. Swiss-Prot
Match: WRK57_ARATH (Probable WRKY transcription factor 57 OS=Arabidopsis thaliana GN=WRKY57 PE=2 SV=1) HSP 1 Score: 119.0 bits (297), Expect = 6.5e-26 Identity = 71/161 (44.10%), Postives = 93/161 (57.76%), Query Frame = 1
BLAST of CSPI03G07040 vs. Swiss-Prot
Match: WRK48_ARATH (Probable WRKY transcription factor 48 OS=Arabidopsis thaliana GN=WRKY48 PE=2 SV=1) HSP 1 Score: 118.6 bits (296), Expect = 8.4e-26 Identity = 78/196 (39.80%), Postives = 101/196 (51.53%), Query Frame = 1
BLAST of CSPI03G07040 vs. TrEMBL
Match: A0A0A0L3J0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G116700 PE=4 SV=1) HSP 1 Score: 460.7 bits (1184), Expect = 1.0e-126 Identity = 218/219 (99.54%), Postives = 218/219 (99.54%), Query Frame = 1
BLAST of CSPI03G07040 vs. TrEMBL
Match: A0A061DUM5_THECC (WRKY family transcription factor OS=Theobroma cacao GN=TCM_005744 PE=4 SV=1) HSP 1 Score: 282.3 bits (721), Expect = 4.9e-73 Identity = 141/204 (69.12%), Postives = 163/204 (79.90%), Query Frame = 1
BLAST of CSPI03G07040 vs. TrEMBL
Match: A0A0S3SVH6_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.09G016400 PE=4 SV=1) HSP 1 Score: 280.4 bits (716), Expect = 1.9e-72 Identity = 151/228 (66.23%), Postives = 166/228 (72.81%), Query Frame = 1
BLAST of CSPI03G07040 vs. TrEMBL
Match: F8RKQ9_MEDTR (STP OS=Medicago truncatula GN=MTR_8g007270 PE=2 SV=1) HSP 1 Score: 278.1 bits (710), Expect = 9.3e-72 Identity = 146/223 (65.47%), Postives = 166/223 (74.44%), Query Frame = 1
BLAST of CSPI03G07040 vs. TrEMBL
Match: S5CH33_JATCU (Uncharacterized protein OS=Jatropha curcas GN=WRKY16 PE=4 SV=1) HSP 1 Score: 277.3 bits (708), Expect = 1.6e-71 Identity = 145/207 (70.05%), Postives = 171/207 (82.61%), Query Frame = 1
BLAST of CSPI03G07040 vs. TAIR10
Match: AT2G44745.1 (AT2G44745.1 WRKY family transcription factor) HSP 1 Score: 202.2 bits (513), Expect = 3.3e-52 Identity = 112/192 (58.33%), Postives = 137/192 (71.35%), Query Frame = 1
BLAST of CSPI03G07040 vs. TAIR10
Match: AT4G39410.1 (AT4G39410.1 WRKY DNA-binding protein 13) HSP 1 Score: 151.0 bits (380), Expect = 8.7e-37 Identity = 73/104 (70.19%), Postives = 85/104 (81.73%), Query Frame = 1
BLAST of CSPI03G07040 vs. TAIR10
Match: AT2G46130.1 (AT2G46130.1 WRKY DNA-binding protein 43) HSP 1 Score: 121.3 bits (303), Expect = 7.3e-28 Identity = 53/81 (65.43%), Postives = 68/81 (83.95%), Query Frame = 1
BLAST of CSPI03G07040 vs. TAIR10
Match: AT1G69310.1 (AT1G69310.1 WRKY DNA-binding protein 57) HSP 1 Score: 119.0 bits (297), Expect = 3.6e-27 Identity = 71/161 (44.10%), Postives = 93/161 (57.76%), Query Frame = 1
BLAST of CSPI03G07040 vs. TAIR10
Match: AT5G49520.1 (AT5G49520.1 WRKY DNA-binding protein 48) HSP 1 Score: 118.6 bits (296), Expect = 4.8e-27 Identity = 78/196 (39.80%), Postives = 101/196 (51.53%), Query Frame = 1
BLAST of CSPI03G07040 vs. NCBI nr
Match: gi|449431940|ref|XP_004133758.1| (PREDICTED: probable WRKY transcription factor 12 [Cucumis sativus]) HSP 1 Score: 460.7 bits (1184), Expect = 1.4e-126 Identity = 218/219 (99.54%), Postives = 218/219 (99.54%), Query Frame = 1
BLAST of CSPI03G07040 vs. NCBI nr
Match: gi|659074721|ref|XP_008437760.1| (PREDICTED: probable WRKY transcription factor 12 [Cucumis melo]) HSP 1 Score: 456.1 bits (1172), Expect = 3.6e-125 Identity = 218/220 (99.09%), Postives = 219/220 (99.55%), Query Frame = 1
BLAST of CSPI03G07040 vs. NCBI nr
Match: gi|225453346|ref|XP_002270527.1| (PREDICTED: probable WRKY transcription factor 12 [Vitis vinifera]) HSP 1 Score: 291.6 bits (745), Expect = 1.2e-75 Identity = 152/219 (69.41%), Postives = 174/219 (79.45%), Query Frame = 1
BLAST of CSPI03G07040 vs. NCBI nr
Match: gi|590724039|ref|XP_007052352.1| (WRKY family transcription factor [Theobroma cacao]) HSP 1 Score: 282.3 bits (721), Expect = 7.1e-73 Identity = 141/204 (69.12%), Postives = 163/204 (79.90%), Query Frame = 1
BLAST of CSPI03G07040 vs. NCBI nr
Match: gi|965610717|dbj|BAT96856.1| (hypothetical protein VIGAN_09016400 [Vigna angularis var. angularis]) HSP 1 Score: 280.4 bits (716), Expect = 2.7e-72 Identity = 151/228 (66.23%), Postives = 166/228 (72.81%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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