MELO3C005937.2 (gene) Melon (DHL92) v3.6.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C005937.2
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.6.1)
Description	WRKY family transcription factor
Location	chr06 : 85973 .. 87936 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GCTTTTGCTTTGCTTTCTTGGGATCACTTTCCTTGGTATAATCATAGTGAGAAAGACGAATAATGGAAACTGGAACCCAGACCCAAAGATCATCAGGAAGAGGGGAGGATTATGAAGTTCAAGTGTCGTTCCACCTCTCAAATGATCCACACCACATCCACGAAATGGGATTTGTGCAGTTGGAAGAGCACAGCCAGGTTTTGAGCTTCTTGGCACCCAACAACAACAACAACAACGCCACCAATATGCCACCTCCTCCCTTTACTACTACTTCTCCCCATTCCAACATCCTCCCTCGACCACCTTCTTGGACTAATCACCAGGTACTAACTACTAACTACTATTAATATTAATTTTCTCACCTTTTTTCTATCAATTAATATACATGTATTAAGTTGTCATCCCCTAATTCCCATCAGCTGCCTGGAACACTGGATCCCAAGCCCGGTAATGACGAAAACTGCACGGCTACTGCTACTGATGCCACCAATTCATGGTATACACAAATACAACAAAACCCTAATTATTACATAATGTTTGCACGTACGGTCAGTGAGTTAGGTAGGAATGAATTAATATGAATATATACATGATCATGCTCTTAATTTACACTGCAGGTGGAGAAACACAAACGCGGATAAGAGTAAGGTGAAGGTAAGGAGAAAGCTGAGAGAACCACGTTTCTGTTTTCAGACCAGAAGCGATGTTGATGTGCTGGACGATGGCTATAAATGGAGAAAATATGGCCAAAAAGTTGTCAAGAACAGCCTTCATCCTAGGTACTACCCATCCTTACCTCCTTCTCGATCCTCCTACCCTTGTTTTTCTTCTTTCTTTTAATACATATTATCGCATCCCTCTCTCGCATCCCATGCACCACTACTGCCACCCAAACCCTTATGTTCTTTGCTAATATAACATCCACCATTCACTTTCCATTCTTTTCAATTATATGATCACTACCCTAACTTTGAATTTAATTTATCTACACAACTTAGCTTCTTCATGATCGCATATTAATTTCATGCATCATCGAGTCTCCTTGCTATTTTAATTTTGAGATGAAATTAATTTTTTTAAATCTAGATTCACGAGTGTAGAATAGAACAGATTAAAGTTGTTTGACGTGTTGGGAGAGATTGATTAGTTATGACGCAAATTAAGGCATACGGATTATTGTCATAAGTTGCATTGCATTGTATGTGTATATATATATGTATAGCATGTATGTATTATCATGAGTTGTTAATGATGCGCGATAGAGAGAGGTTAATGACAAAAGCACGAATGGAATGATAAAACAATTGATTAGTTAGTATAGAAAATAGATATAATATATACATATACATGTATGTAGAGAGAGGATAAAATAATTAGGAGAAAGAGAAGTGAAGAGGGGGGTTTTGGGGGTTTGGGGGTTTGGGTAGTTCACAGTTCAGTTTCAGTAGTAGGCAGATTGGGAATGATTATGTTATATTCTCTTCGCCAGTGCCATCATTATTGATTTGGGGATTTTGGTTATAGGTGGCCGCCCCCCCAAGGCCAAGGCCAAGGCCACGGGCCAGAGAACAACTACCAGTCATCCACACACACACATATATATACCTATATTCTTCTATTTCTAATTTTGACTACTTTTTCTTTACTCTCTGCACAACACAACAACATATCCATTCATTTCATTTTGGTTTCTTTGGTGAATTAATATGCAATGGTAGGATGAGAACAAATAATTATAGTCAAGGGTTAAATGATGATGGCGATTAATAATTTGCAGAAGCTACTATCGTTGCACGCATAGCAACTGCCGAGTGAAGAAGAGGGTAGAGCGACTGTCGGAGGATTGCCGGATGGTGATAACCACTTACGAAGGTAGACACAACCACTCTCCTTGCGATGACTCCAATTCTTCGGAGCACGAACCCTTTACATCATTCTGACTTCCGGCTCATTAATTCCCGGCC

mRNA sequence

GCTTTTGCTTTGCTTTCTTGGGATCACTTTCCTTGGTATAATCATAGTGAGAAAGACGAATAATGGAAACTGGAACCCAGACCCAAAGATCATCAGGAAGAGGGGAGGATTATGAAGTTCAAGTGTCGTTCCACCTCTCAAATGATCCACACCACATCCACGAAATGGGATTTGTGCAGTTGGAAGAGCACAGCCAGGTTTTGAGCTTCTTGGCACCCAACAACAACAACAACAACGCCACCAATATGCCACCTCCTCCCTTTACTACTACTTCTCCCCATTCCAACATCCTCCCTCGACCACCTTCTTGGACTAATCACCAGCTGCCTGGAACACTGGATCCCAAGCCCGGTAATGACGAAAACTGCACGGCTACTGCTACTGATGCCACCAATTCATGGTGGAGAAACACAAACGCGGATAAGAGTAAGGTGAAGGTAAGGAGAAAGCTGAGAGAACCACGTTTCTGTTTTCAGACCAGAAGCGATGTTGATGTGCTGGACGATGGCTATAAATGGAGAAAATATGGCCAAAAAGTTGTCAAGAACAGCCTTCATCCTAGAAGCTACTATCGTTGCACGCATAGCAACTGCCGAGTGAAGAAGAGGGTAGAGCGACTGTCGGAGGATTGCCGGATGGTGATAACCACTTACGAAGGTAGACACAACCACTCTCCTTGCGATGACTCCAATTCTTCGGAGCACGAACCCTTTACATCATTCTGACTTCCGGCTCATTAATTCCCGGCC

Coding sequence (CDS)

ATGGAAACTGGAACCCAGACCCAAAGATCATCAGGAAGAGGGGAGGATTATGAAGTTCAAGTGTCGTTCCACCTCTCAAATGATCCACACCACATCCACGAAATGGGATTTGTGCAGTTGGAAGAGCACAGCCAGGTTTTGAGCTTCTTGGCACCCAACAACAACAACAACAACGCCACCAATATGCCACCTCCTCCCTTTACTACTACTTCTCCCCATTCCAACATCCTCCCTCGACCACCTTCTTGGACTAATCACCAGCTGCCTGGAACACTGGATCCCAAGCCCGGTAATGACGAAAACTGCACGGCTACTGCTACTGATGCCACCAATTCATGGTGGAGAAACACAAACGCGGATAAGAGTAAGGTGAAGGTAAGGAGAAAGCTGAGAGAACCACGTTTCTGTTTTCAGACCAGAAGCGATGTTGATGTGCTGGACGATGGCTATAAATGGAGAAAATATGGCCAAAAAGTTGTCAAGAACAGCCTTCATCCTAGAAGCTACTATCGTTGCACGCATAGCAACTGCCGAGTGAAGAAGAGGGTAGAGCGACTGTCGGAGGATTGCCGGATGGTGATAACCACTTACGAAGGTAGACACAACCACTCTCCTTGCGATGACTCCAATTCTTCGGAGCACGAACCCTTTACATCATTCTGA

Protein sequence

METGTQTQRSSGRGEDYEVQVSFHLSNDPHHIHEMGFVQLEEHSQVLSFLAPNNNNNNATNMPPPPFTTTSPHSNILPRPPSWTNHQLPGTLDPKPGNDENCTATATDATNSWWRNTNADKSKVKVRRKLREPRFCFQTRSDVDVLDDGYKWRKYGQKVVKNSLHPRSYYRCTHSNCRVKKRVERLSEDCRMVITTYEGRHNHSPCDDSNSSEHEPFTSF

Homology

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BLAST of MELO3C005937.2 vs. NCBI nr
Match: XP_008437760.1 (PREDICTED: probable WRKY transcription factor 12 [Cucumis melo])

HSP 1 Score: 416.0 bits (1068), Expect = 8.0e-113
Identity = 220/220 (100.00%), Postives = 220/220 (100.00%), Query Frame = 0


Query: 1   METGTQTQRSSGRGEDYEVQVSFHLSNDPHHIHEMGFVQLEEHSQVLSFLAPXXXXXXXX 60
           METGTQTQRSSGRGEDYEVQVSFHLSNDPHHIHEMGFVQLEEHSQVLSFLAPXXXXXXXX
Sbjct: 1   METGTQTQRSSGRGEDYEVQVSFHLSNDPHHIHEMGFVQLEEHSQVLSFLAPXXXXXXXX 60

Query: 61  XXXXXXXXXXXXHSNILPRPPSWTNHQLPGTLDPKPGNDENCTATATDATNSWWRNTNAD 120
           XXXXXXXXXXXXHSNILPRPPSWTNHQLPGTLDPKPGNDENCTATATDATNSWWRNTNAD
Sbjct: 61  XXXXXXXXXXXXHSNILPRPPSWTNHQLPGTLDPKPGNDENCTATATDATNSWWRNTNAD 120

Query: 121 KSKVKVRRKLREPRFCFQTRSDVDVLDDGYKWRKYGQKVVKNSLHPRSYYRCTHSNCRVK 180
           KSKVKVRRKLREPRFCFQTRSDVDVLDDGYKWRKYGQKVVKNSLHPRSYYRCTHSNCRVK
Sbjct: 121 KSKVKVRRKLREPRFCFQTRSDVDVLDDGYKWRKYGQKVVKNSLHPRSYYRCTHSNCRVK 180

Query: 181 KRVERLSEDCRMVITTYEGRHNHSPCDDSNSSEHEPFTSF 221
           KRVERLSEDCRMVITTYEGRHNHSPCDDSNSSEHEPFTSF
Sbjct: 181 KRVERLSEDCRMVITTYEGRHNHSPCDDSNSSEHEPFTSF 220

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BLAST of MELO3C005937.2 vs. NCBI nr
Match: XP_004133758.1 (PREDICTED: probable WRKY transcription factor 12 [Cucumis sativus] >KGN56333.1 hypothetical protein Csa_3G116700 [Cucumis sativus])

HSP 1 Score: 410.6 bits (1054), Expect = 3.3e-111
Identity = 218/220 (99.09%), Postives = 219/220 (99.55%), Query Frame = 0


Query: 1   METGTQTQRSSGRGEDYEVQVSFHLSNDPHHIHEMGFVQLEEHSQVLSFLAPXXXXXXXX 60
           METGTQTQRSSGRGEDYEVQVSFHLSNDPHHIHEMGFVQLEEHSQVLSFLAP XXXXXXX
Sbjct: 1   METGTQTQRSSGRGEDYEVQVSFHLSNDPHHIHEMGFVQLEEHSQVLSFLAP-XXXXXXX 60

Query: 61  XXXXXXXXXXXXHSNILPRPPSWTNHQLPGTLDPKPGNDENCTATATDATNSWWRNTNAD 120
           XXXXXXXXXXXXHSNILPRPPSWTNHQLPGTLDPKPGNDENCTATATDATNSWWRNTNAD
Sbjct: 61  XXXXXXXXXXXXHSNILPRPPSWTNHQLPGTLDPKPGNDENCTATATDATNSWWRNTNAD 120

Query: 121 KSKVKVRRKLREPRFCFQTRSDVDVLDDGYKWRKYGQKVVKNSLHPRSYYRCTHSNCRVK 180
           KSKVKVRRKLREPRFCFQTRSDVDVLDDGYKWRKYGQKVVKNSLHPRSYYRCTHSNCRVK
Sbjct: 121 KSKVKVRRKLREPRFCFQTRSDVDVLDDGYKWRKYGQKVVKNSLHPRSYYRCTHSNCRVK 180

Query: 181 KRVERLSEDCRMVITTYEGRHNHSPCDDSNSSEHEPFTSF 221
           KRVERLSEDCRMVITTYEGRHNH+PCDDSNSSEHEPFTSF
Sbjct: 181 KRVERLSEDCRMVITTYEGRHNHTPCDDSNSSEHEPFTSF 219

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BLAST of MELO3C005937.2 vs. NCBI nr
Match: XP_022924619.1 (probable WRKY transcription factor 12 [Cucurbita moschata])

HSP 1 Score: 315.5 bits (807), Expect = 1.5e-82
Identity = 161/223 (72.20%), Postives = 179/223 (80.27%), Query Frame = 0


Query: 1   METGTQTQRSSGRGEDYEVQVSFHLSND---PHHIHEMGFVQLEEHSQVLSFLAPXXXXX 60
           METG+Q    SG    Y++Q+SFHLSN    P  IH+MGFV  ++H+QVLSFL+P     
Sbjct: 1   METGSQI---SGL-PSYQLQLSFHLSNAPPLPQPIHQMGFVHFQDHTQVLSFLSP----N 60

Query: 61  XXXXXXXXXXXXXXXHSNILPRPPSWTNHQLPGTLDPKPGNDENCTATATDATNSWWRNT 120
                          H++++ R PSW+N Q+ GT DPKPGNDENC  +A+D +NSWWRNT
Sbjct: 61  TAATATMPPAFTTSAHAHLVSR-PSWSNEQV-GTQDPKPGNDENCNGSASDGSNSWWRNT 120

Query: 121 NADKSKVKVRRKLREPRFCFQTRSDVDVLDDGYKWRKYGQKVVKNSLHPRSYYRCTHSNC 180
           NADKSKVKVRRKLREPRFCFQTRSDVDVLDDGYKWRKYGQKVVKNSLHPRSYYRCTHSNC
Sbjct: 121 NADKSKVKVRRKLREPRFCFQTRSDVDVLDDGYKWRKYGQKVVKNSLHPRSYYRCTHSNC 180

Query: 181 RVKKRVERLSEDCRMVITTYEGRHNHSPCDDSNSSEHEPFTSF 221
           RVKKRVERLSEDCRMVITTYEGRHNHSPCDDSNSSEHEPFTSF
Sbjct: 181 RVKKRVERLSEDCRMVITTYEGRHNHSPCDDSNSSEHEPFTSF 213

[Close]

BLAST of MELO3C005937.2 vs. NCBI nr
Match: XP_022979595.1 (probable WRKY transcription factor 12 [Cucurbita maxima])

HSP 1 Score: 313.9 bits (803), Expect = 4.3e-82
Identity = 160/223 (71.75%), Postives = 179/223 (80.27%), Query Frame = 0


Query: 1   METGTQTQRSSGRGEDYEVQVSFHLSND---PHHIHEMGFVQLEEHSQVLSFLAPXXXXX 60
           METG+Q    SG    Y++Q+SFHLSN    P  IH+MGFV  ++H+QVLSFL+P     
Sbjct: 1   METGSQI---SGL-PSYQLQLSFHLSNAPPLPQPIHQMGFVHFQDHTQVLSFLSP----N 60

Query: 61  XXXXXXXXXXXXXXXHSNILPRPPSWTNHQLPGTLDPKPGNDENCTATATDATNSWWRNT 120
                          H++++ R PSW+N Q+ GT DPKPGNDENC  +A+D +NSWWR+T
Sbjct: 61  SAATATMPPAFTTSAHAHLISR-PSWSNEQV-GTQDPKPGNDENCNGSASDGSNSWWRST 120

Query: 121 NADKSKVKVRRKLREPRFCFQTRSDVDVLDDGYKWRKYGQKVVKNSLHPRSYYRCTHSNC 180
           NADKSKVKVRRKLREPRFCFQTRSDVDVLDDGYKWRKYGQKVVKNSLHPRSYYRCTHSNC
Sbjct: 121 NADKSKVKVRRKLREPRFCFQTRSDVDVLDDGYKWRKYGQKVVKNSLHPRSYYRCTHSNC 180

Query: 181 RVKKRVERLSEDCRMVITTYEGRHNHSPCDDSNSSEHEPFTSF 221
           RVKKRVERLSEDCRMVITTYEGRHNHSPCDDSNSSEHEPFTSF
Sbjct: 181 RVKKRVERLSEDCRMVITTYEGRHNHSPCDDSNSSEHEPFTSF 213

[Close]

BLAST of MELO3C005937.2 vs. NCBI nr
Match: XP_023527795.1 (probable WRKY transcription factor 12 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 313.9 bits (803), Expect = 4.3e-82
Identity = 160/223 (71.75%), Postives = 178/223 (79.82%), Query Frame = 0


Query: 1   METGTQTQRSSGRGEDYEVQVSFHLSND---PHHIHEMGFVQLEEHSQVLSFLAPXXXXX 60
           METG+Q    SG    Y++Q+SFHLSN    P  IH+MGFV  ++H+QVLSFL+P     
Sbjct: 1   METGSQI---SGL-PSYQLQLSFHLSNAPPLPQPIHQMGFVHFQDHTQVLSFLSP----N 60

Query: 61  XXXXXXXXXXXXXXXHSNILPRPPSWTNHQLPGTLDPKPGNDENCTATATDATNSWWRNT 120
                          H++++ R PSW+N Q+ GT DPKPGNDENC  +A+D  NSWWRNT
Sbjct: 61  TAATATMPPAFTTSAHAHLVSR-PSWSNEQV-GTQDPKPGNDENCNGSASDGNNSWWRNT 120

Query: 121 NADKSKVKVRRKLREPRFCFQTRSDVDVLDDGYKWRKYGQKVVKNSLHPRSYYRCTHSNC 180
           NADKSKVKVRRKLREPRFCFQTRSDVDVLDDGYKWRKYGQKVVKNSLHPRSYYRCTH+NC
Sbjct: 121 NADKSKVKVRRKLREPRFCFQTRSDVDVLDDGYKWRKYGQKVVKNSLHPRSYYRCTHNNC 180

Query: 181 RVKKRVERLSEDCRMVITTYEGRHNHSPCDDSNSSEHEPFTSF 221
           RVKKRVERLSEDCRMVITTYEGRHNHSPCDDSNSSEHEPFTSF
Sbjct: 181 RVKKRVERLSEDCRMVITTYEGRHNHSPCDDSNSSEHEPFTSF 213

[Close]

BLAST of MELO3C005937.2 vs. TAIR10
Match: AT2G44745.1 (WRKY family transcription factor)

HSP 1 Score: 189.9 bits (481), Expect = 1.7e-48
Identity = 87/100 (87.00%), Postives = 94/100 (94.00%), Query Frame = 0


Query: 121 KSKVKVRRKLREPRFCFQTRSDVDVLDDGYKWRKYGQKVVKNSLHPRSYYRCTHSNCRVK 180
           K+KVK+RRKLREPRFCFQT+SDVDVLDDGYKWRKYGQKVVKNSLHPRSYYRCTH+NCRVK
Sbjct: 119 KNKVKIRRKLREPRFCFQTKSDVDVLDDGYKWRKYGQKVVKNSLHPRSYYRCTHNNCRVK 178

Query: 181 KRVERLSEDCRMVITTYEGRHNHSPCDDSNSSEHEPFTSF 221
           KRVERLSEDCRMVITTYEGRHNH P DDS S +H+  +SF
Sbjct: 179 KRVERLSEDCRMVITTYEGRHNHIPSDDSTSPDHDCLSSF 218

[Close]

BLAST of MELO3C005937.2 vs. TAIR10
Match: AT4G39410.1 (WRKY DNA-binding protein 13)

HSP 1 Score: 151.0 bits (380), Expect = 8.7e-37
Identity = 74/104 (71.15%), Postives = 85/104 (81.73%), Query Frame = 0


Query: 123 KVKVRRKLREPRFCFQTRSDVDVLDDGYKWRKYGQKVVKNSLHPRSYYRCTHSNCRVKKR 182
           K+K RRK+REPRFCF+T S+VDVLDDGY+WRKYGQKVVKN+ HPRSYYRCT   CRVKKR
Sbjct: 199 KLKTRRKVREPRFCFKTLSEVDVLDDGYRWRKYGQKVVKNTQHPRSYYRCTQDKCRVKKR 258

Query: 183 VERLSEDCRMVITTYEGRHNHSPC----DDSNSSE--HEPFTSF 221
           VERL++D RMVITTYEGRH HSP     DDS S+   H P ++F
Sbjct: 259 VERLADDPRMVITTYEGRHLHSPSNHLDDDSLSTSHLHPPLSNF 302

[Close]

BLAST of MELO3C005937.2 vs. TAIR10
Match: AT2G46130.1 (WRKY DNA-binding protein 43)

HSP 1 Score: 121.3 bits (303), Expect = 7.3e-28
Identity = 53/81 (65.43%), Postives = 68/81 (83.95%), Query Frame = 0


Query: 128 RKLREPRFCFQTRSDVDVLDDGYKWRKYGQKVVKNSLHPRSYYRCTHSNCRVKKRVERLS 187
           +K++ PRF F+T+SD D+LDDGY+WRKYGQK VKNSL+PRSYYRCT   C VKK+V+RLS
Sbjct: 11  KKMKNPRFSFRTKSDADILDDGYRWRKYGQKSVKNSLYPRSYYRCTQHMCNVKKQVQRLS 70

Query: 188 EDCRMVITTYEGRHNHSPCDD 209
           ++  +V TTYEG HNH PC++
Sbjct: 71  KETSIVETTYEGIHNH-PCEE 90

[Close]

BLAST of MELO3C005937.2 vs. TAIR10
Match: AT5G41570.1 (WRKY DNA-binding protein 24)

HSP 1 Score: 119.4 bits (298), Expect = 2.8e-27
Identity = 53/85 (62.35%), Postives = 68/85 (80.00%), Query Frame = 0


Query: 123 KVKVRRKLREPRFCFQTRSDVDVLDDGYKWRKYGQKVVKNSLHPRSYYRCTHSNCRVKKR 182
           ++K +R  + PR  F TRSD DVLDDGY+WRKYGQK VK++ HPRSYYRCT+  C VKK+
Sbjct: 74  ELKEKRSRKVPRIAFHTRSDDDVLDDGYRWRKYGQKSVKHNAHPRSYYRCTYHTCNVKKQ 133

Query: 183 VERLSEDCRMVITTYEGRHNHSPCD 208
           V+RL++D  +V+TTYEG HNH PC+
Sbjct: 134 VQRLAKDPNVVVTTYEGVHNH-PCE 157

[Close]

BLAST of MELO3C005937.2 vs. TAIR10
Match: AT1G69310.1 (WRKY DNA-binding protein 57)

HSP 1 Score: 119.0 bits (297), Expect = 3.6e-27
Identity = 53/76 (69.74%), Postives = 64/76 (84.21%), Query Frame = 0


Query: 128 RKLREPRFCFQTRSDVDVLDDGYKWRKYGQKVVKNSLHPRSYYRCTHSNCRVKKRVERLS 187
           +++R+PRF F T+SDVD L+DGY+WRKYGQK VKNS  PRSYYRCT+S C VKKRVER S
Sbjct: 128 KRIRQPRFAFMTKSDVDNLEDGYRWRKYGQKAVKNSPFPRSYYRCTNSRCTVKKRVERSS 187

Query: 188 EDCRMVITTYEGRHNH 204
           +D  +VITTYEG+H H
Sbjct: 188 DDPSIVITTYEGQHCH 203

[Close]

BLAST of MELO3C005937.2 vs. Swiss-Prot
Match: sp|Q93WY4|WRK12_ARATH (Probable WRKY transcription factor 12 OS=Arabidopsis thaliana OX=3702 GN=WRKY12 PE=2 SV=1)

HSP 1 Score: 189.9 bits (481), Expect = 3.0e-47
Identity = 87/100 (87.00%), Postives = 94/100 (94.00%), Query Frame = 0


Query: 121 KSKVKVRRKLREPRFCFQTRSDVDVLDDGYKWRKYGQKVVKNSLHPRSYYRCTHSNCRVK 180
           K+KVK+RRKLREPRFCFQT+SDVDVLDDGYKWRKYGQKVVKNSLHPRSYYRCTH+NCRVK
Sbjct: 119 KNKVKIRRKLREPRFCFQTKSDVDVLDDGYKWRKYGQKVVKNSLHPRSYYRCTHNNCRVK 178

Query: 181 KRVERLSEDCRMVITTYEGRHNHSPCDDSNSSEHEPFTSF 221
           KRVERLSEDCRMVITTYEGRHNH P DDS S +H+  +SF
Sbjct: 179 KRVERLSEDCRMVITTYEGRHNHIPSDDSTSPDHDCLSSF 218

[Close]

BLAST of MELO3C005937.2 vs. Swiss-Prot
Match: sp|Q9SVB7|WRK13_ARATH (Probable WRKY transcription factor 13 OS=Arabidopsis thaliana OX=3702 GN=WRKY13 PE=2 SV=1)

HSP 1 Score: 151.0 bits (380), Expect = 1.6e-35
Identity = 74/104 (71.15%), Postives = 85/104 (81.73%), Query Frame = 0


Query: 123 KVKVRRKLREPRFCFQTRSDVDVLDDGYKWRKYGQKVVKNSLHPRSYYRCTHSNCRVKKR 182
           K+K RRK+REPRFCF+T S+VDVLDDGY+WRKYGQKVVKN+ HPRSYYRCT   CRVKKR
Sbjct: 199 KLKTRRKVREPRFCFKTLSEVDVLDDGYRWRKYGQKVVKNTQHPRSYYRCTQDKCRVKKR 258

Query: 183 VERLSEDCRMVITTYEGRHNHSPC----DDSNSSE--HEPFTSF 221
           VERL++D RMVITTYEGRH HSP     DDS S+   H P ++F
Sbjct: 259 VERLADDPRMVITTYEGRHLHSPSNHLDDDSLSTSHLHPPLSNF 302

[Close]

BLAST of MELO3C005937.2 vs. Swiss-Prot
Match: sp|Q8GY11|WRK43_ARATH (Probable WRKY transcription factor 43 OS=Arabidopsis thaliana OX=3702 GN=WRKY43 PE=1 SV=1)

HSP 1 Score: 121.3 bits (303), Expect = 1.3e-26
Identity = 53/81 (65.43%), Postives = 68/81 (83.95%), Query Frame = 0


Query: 128 RKLREPRFCFQTRSDVDVLDDGYKWRKYGQKVVKNSLHPRSYYRCTHSNCRVKKRVERLS 187
           +K++ PRF F+T+SD D+LDDGY+WRKYGQK VKNSL+PRSYYRCT   C VKK+V+RLS
Sbjct: 11  KKMKNPRFSFRTKSDADILDDGYRWRKYGQKSVKNSLYPRSYYRCTQHMCNVKKQVQRLS 70

Query: 188 EDCRMVITTYEGRHNHSPCDD 209
           ++  +V TTYEG HNH PC++
Sbjct: 71  KETSIVETTYEGIHNH-PCEE 90

[Close]

BLAST of MELO3C005937.2 vs. Swiss-Prot
Match: sp|Q9FFS3|WRK24_ARATH (Probable WRKY transcription factor 24 OS=Arabidopsis thaliana OX=3702 GN=WRKY24 PE=2 SV=1)

HSP 1 Score: 119.4 bits (298), Expect = 5.0e-26
Identity = 53/85 (62.35%), Postives = 68/85 (80.00%), Query Frame = 0


Query: 123 KVKVRRKLREPRFCFQTRSDVDVLDDGYKWRKYGQKVVKNSLHPRSYYRCTHSNCRVKKR 182
           ++K +R  + PR  F TRSD DVLDDGY+WRKYGQK VK++ HPRSYYRCT+  C VKK+
Sbjct: 74  ELKEKRSRKVPRIAFHTRSDDDVLDDGYRWRKYGQKSVKHNAHPRSYYRCTYHTCNVKKQ 133

Query: 183 VERLSEDCRMVITTYEGRHNHSPCD 208
           V+RL++D  +V+TTYEG HNH PC+
Sbjct: 134 VQRLAKDPNVVVTTYEGVHNH-PCE 157

[Close]

BLAST of MELO3C005937.2 vs. Swiss-Prot
Match: sp|Q8VWQ4|WRK56_ARATH (Probable WRKY transcription factor 56 OS=Arabidopsis thaliana OX=3702 GN=WRKY56 PE=2 SV=1)

HSP 1 Score: 119.0 bits (297), Expect = 6.6e-26
Identity = 55/86 (63.95%), Postives = 67/86 (77.91%), Query Frame = 0


Query: 122 SKVKVRRKLREPRFCFQTRSDVDVLDDGYKWRKYGQKVVKNSLHPRSYYRCTHSNCRVKK 181
           +K K +R L   R  F TRSD DVLDDGY+WRKYGQK VKN+ HPRSYYRCT+  C VKK
Sbjct: 89  NKGKGKRTLAMQRIAFHTRSDDDVLDDGYRWRKYGQKSVKNNAHPRSYYRCTYHTCNVKK 148

Query: 182 RVERLSEDCRMVITTYEGRHNHSPCD 208
           +V+RL++D  +V+TTYEG HNH PC+
Sbjct: 149 QVQRLAKDPNVVVTTYEGVHNH-PCE 173

[Close]

BLAST of MELO3C005937.2 vs. TrEMBL
Match: tr|A0A1S3AVD7|A0A1S3AVD7_CUCME (probable WRKY transcription factor 12 OS=Cucumis melo OX=3656 GN=LOC103483097 PE=4 SV=1)

HSP 1 Score: 416.0 bits (1068), Expect = 5.3e-113
Identity = 220/220 (100.00%), Postives = 220/220 (100.00%), Query Frame = 0


Query: 1   METGTQTQRSSGRGEDYEVQVSFHLSNDPHHIHEMGFVQLEEHSQVLSFLAPXXXXXXXX 60
           METGTQTQRSSGRGEDYEVQVSFHLSNDPHHIHEMGFVQLEEHSQVLSFLAPXXXXXXXX
Sbjct: 1   METGTQTQRSSGRGEDYEVQVSFHLSNDPHHIHEMGFVQLEEHSQVLSFLAPXXXXXXXX 60

Query: 61  XXXXXXXXXXXXHSNILPRPPSWTNHQLPGTLDPKPGNDENCTATATDATNSWWRNTNAD 120
           XXXXXXXXXXXXHSNILPRPPSWTNHQLPGTLDPKPGNDENCTATATDATNSWWRNTNAD
Sbjct: 61  XXXXXXXXXXXXHSNILPRPPSWTNHQLPGTLDPKPGNDENCTATATDATNSWWRNTNAD 120

Query: 121 KSKVKVRRKLREPRFCFQTRSDVDVLDDGYKWRKYGQKVVKNSLHPRSYYRCTHSNCRVK 180
           KSKVKVRRKLREPRFCFQTRSDVDVLDDGYKWRKYGQKVVKNSLHPRSYYRCTHSNCRVK
Sbjct: 121 KSKVKVRRKLREPRFCFQTRSDVDVLDDGYKWRKYGQKVVKNSLHPRSYYRCTHSNCRVK 180

Query: 181 KRVERLSEDCRMVITTYEGRHNHSPCDDSNSSEHEPFTSF 221
           KRVERLSEDCRMVITTYEGRHNHSPCDDSNSSEHEPFTSF
Sbjct: 181 KRVERLSEDCRMVITTYEGRHNHSPCDDSNSSEHEPFTSF 220

[Close]

BLAST of MELO3C005937.2 vs. TrEMBL
Match: tr|A0A0A0L3J0|A0A0A0L3J0_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G116700 PE=4 SV=1)

HSP 1 Score: 410.6 bits (1054), Expect = 2.2e-111
Identity = 218/220 (99.09%), Postives = 219/220 (99.55%), Query Frame = 0


Query: 1   METGTQTQRSSGRGEDYEVQVSFHLSNDPHHIHEMGFVQLEEHSQVLSFLAPXXXXXXXX 60
           METGTQTQRSSGRGEDYEVQVSFHLSNDPHHIHEMGFVQLEEHSQVLSFLAP XXXXXXX
Sbjct: 1   METGTQTQRSSGRGEDYEVQVSFHLSNDPHHIHEMGFVQLEEHSQVLSFLAP-XXXXXXX 60

Query: 61  XXXXXXXXXXXXHSNILPRPPSWTNHQLPGTLDPKPGNDENCTATATDATNSWWRNTNAD 120
           XXXXXXXXXXXXHSNILPRPPSWTNHQLPGTLDPKPGNDENCTATATDATNSWWRNTNAD
Sbjct: 61  XXXXXXXXXXXXHSNILPRPPSWTNHQLPGTLDPKPGNDENCTATATDATNSWWRNTNAD 120

Query: 121 KSKVKVRRKLREPRFCFQTRSDVDVLDDGYKWRKYGQKVVKNSLHPRSYYRCTHSNCRVK 180
           KSKVKVRRKLREPRFCFQTRSDVDVLDDGYKWRKYGQKVVKNSLHPRSYYRCTHSNCRVK
Sbjct: 121 KSKVKVRRKLREPRFCFQTRSDVDVLDDGYKWRKYGQKVVKNSLHPRSYYRCTHSNCRVK 180

Query: 181 KRVERLSEDCRMVITTYEGRHNHSPCDDSNSSEHEPFTSF 221
           KRVERLSEDCRMVITTYEGRHNH+PCDDSNSSEHEPFTSF
Sbjct: 181 KRVERLSEDCRMVITTYEGRHNHTPCDDSNSSEHEPFTSF 219

[Close]

BLAST of MELO3C005937.2 vs. TrEMBL
Match: tr|A0A1U6ZIF2|A0A1U6ZIF2_9ROSI (probable WRKY transcription factor 12 OS=Juglans regia OX=51240 GN=WRKY12 PE=2 SV=1)

HSP 1 Score: 282.0 bits (720), Expect = 1.2e-72
Identity = 162/226 (71.68%), Postives = 177/226 (78.32%), Query Frame = 0


Query: 12  GRGEDYEVQVSFHLSNDPHHIHEMGFVQLEEHSQVLSFLAP-----------------XX 71
           G   +YE+QVSF  S  P  I EMGFVQ E+ +QVLSFLAP                 XX
Sbjct: 7   GSAPNYELQVSF--STTPQAIPEMGFVQFED-NQVLSFLAPSQSSQISQPLSGGXXXXXX 66

Query: 72  XXXXXXXXXXXXXXXXXXHSNILPRPPSWTNHQLPGTLDPKPGNDENCTATATDATNSWW 131
           XXXXXXXXXXX       H++++ R  SW N Q+ GT+DPK  NDENCT  A+D  NSWW
Sbjct: 67  XXXXXXXXXXXPTNMGFSHNDLVTR-SSWNNDQV-GTMDPKAVNDENCTGNASDGNNSWW 126

Query: 132 RNTNADKSKVKVRRKLREPRFCFQTRSDVDVLDDGYKWRKYGQKVVKNSLHPRSYYRCTH 191
           R++N+DKSKVKVRRKLREPRFCFQTRSDVDVLDDGYKWRKYGQKVVKNSLHPRSYYRCTH
Sbjct: 127 RSSNSDKSKVKVRRKLREPRFCFQTRSDVDVLDDGYKWRKYGQKVVKNSLHPRSYYRCTH 186

Query: 192 SNCRVKKRVERLSEDCRMVITTYEGRHNHSPCDDSNSSEHEPFTSF 221
           +NCRVKKRVERLSEDCRMVITTYEGRHNHSPCDDSNSSEHE FTSF
Sbjct: 187 NNCRVKKRVERLSEDCRMVITTYEGRHNHSPCDDSNSSEHECFTSF 227

[Close]

BLAST of MELO3C005937.2 vs. TrEMBL
Match: tr|A0A2P4K7B9|A0A2P4K7B9_QUESU (Putative wrky transcription factor 12 OS=Quercus suber OX=58331 GN=CFP56_57221 PE=4 SV=1)

HSP 1 Score: 276.2 bits (705), Expect = 6.5e-71
Identity = 161/224 (71.88%), Postives = 178/224 (79.46%), Query Frame = 0


Query: 16  DYEVQVSFHLSNDPHHIHEMGFVQLEEHSQVLSFLAP-------------------XXXX 75
           +YE+QVSF  S  P  IH+MGFVQ E+ +QVLSFLAP                   XXXX
Sbjct: 9   NYELQVSF--SATPQAIHDMGFVQFED-NQVLSFLAPSQSSXXXXXXXXXXXXXXXXXXX 68

Query: 76  XXXXXXXXXXXXXXXXHSNILPRPPSWTNHQLPGTLDPKPGNDENCTATATDATNSWWRN 135
           XXXXXXXXXXX     H++++ R PSW N Q+ GT+DPK  NDE+ T  A+D  NSWWR+
Sbjct: 69  XXXXXXXXXXXTMGFSHNDLVTR-PSWNNDQV-GTMDPKAVNDESGTGNASDGNNSWWRS 128

Query: 136 TNADKSKVKVRRKLREPRFCFQTRSDVDVLDDGYKWRKYGQKVVKNSLHPRSYYRCTHSN 195
           + +DKSKVKVRRKLREPRFCFQTRSDVDVLDDGYKWRKYGQKVVKNSLHPRSYYRCTH+N
Sbjct: 129 STSDKSKVKVRRKLREPRFCFQTRSDVDVLDDGYKWRKYGQKVVKNSLHPRSYYRCTHNN 188

Query: 196 CRVKKRVERLSEDCRMVITTYEGRHNHSPCDDSNSSEHEPFTSF 221
           CRVKKRVERLSEDCRMVITTYEGRHNHSPCDDSNSSEHE FTSF
Sbjct: 189 CRVKKRVERLSEDCRMVITTYEGRHNHSPCDDSNSSEHECFTSF 227

[Close]

BLAST of MELO3C005937.2 vs. TrEMBL
Match: tr|A0A1S3VC17|A0A1S3VC17_VIGRR (probable WRKY transcription factor 12 OS=Vigna radiata var. radiata OX=3916 GN=LOC106773678 PE=4 SV=1)

HSP 1 Score: 275.8 bits (704), Expect = 8.5e-71
Identity = 162/224 (72.32%), Postives = 176/224 (78.57%), Query Frame = 0


Query: 12  GRGEDYEVQVSFHLSNDPHHIHEMGFVQLEEHSQVLSFLAP---------------XXXX 71
           G    Y++QVSF  +N P  IHEMGFVQ EE +QVLSFLAP               XXXX
Sbjct: 6   GVNPSYDLQVSF--TNTPQAIHEMGFVQFEE-NQVLSFLAPSAQSXXXXXXXXXXXXXXX 65

Query: 72  XXXXXXXXXXXXXXXXHSNILPRPPSWTNHQLPGTLDPKPGNDENCTATATDATNSWWRN 131
           XXXXXXXXXXXXX   + N L    SW N Q+  TLDPK  NDENCT   +D  N+WWR+
Sbjct: 66  XXXXXXXXXXXXXVGFNHNDLASRSSWNNEQV-RTLDPKAVNDENCTGNTSDGNNTWWRS 125

Query: 132 TNADKSKVKVRRKLREPRFCFQTRSDVDVLDDGYKWRKYGQKVVKNSLHPRSYYRCTHSN 191
           + ++K+KVKVRRKLREPRFCFQTRSDVDVLDDGYKWRKYGQKVVKNSLHPRSYYRCTH+N
Sbjct: 126 SGSEKNKVKVRRKLREPRFCFQTRSDVDVLDDGYKWRKYGQKVVKNSLHPRSYYRCTHNN 185

Query: 192 CRVKKRVERLSEDCRMVITTYEGRHNHSPCDDSNSSEHEPFTSF 221
           CRVKKRVERLSEDCRMVITTYEGRHNHSPCDDSNSSEHE FTSF
Sbjct: 186 CRVKKRVERLSEDCRMVITTYEGRHNHSPCDDSNSSEHECFTSF 225

The following BLAST results are available for this feature:

BLAST of MELO3C005937.2 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008437760.1	8.0e-113	100.00	PREDICTED: probable WRKY transcription factor 12 [Cucumis melo]	[more]
XP_004133758.1	3.3e-111	99.09	PREDICTED: probable WRKY transcription factor 12 [Cucumis sativus] >KGN56333.1 h...	[more]
XP_022924619.1	1.5e-82	72.20	probable WRKY transcription factor 12 [Cucurbita moschata]	[more]
XP_022979595.1	4.3e-82	71.75	probable WRKY transcription factor 12 [Cucurbita maxima]	[more]
XP_023527795.1	4.3e-82	71.75	probable WRKY transcription factor 12 [Cucurbita pepo subsp. pepo]	[more]

BLAST of MELO3C005937.2 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G44745.1	1.7e-48	87.00	WRKY family transcription factor	[more]
AT4G39410.1	8.7e-37	71.15	WRKY DNA-binding protein 13	[more]
AT2G46130.1	7.3e-28	65.43	WRKY DNA-binding protein 43	[more]
AT5G41570.1	2.8e-27	62.35	WRKY DNA-binding protein 24	[more]
AT1G69310.1	3.6e-27	69.74	WRKY DNA-binding protein 57	[more]

BLAST of MELO3C005937.2 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q93WY4\|WRK12_ARATH	3.0e-47	87.00	Probable WRKY transcription factor 12 OS=Arabidopsis thaliana OX=3702 GN=WRKY12 ...	[more]
sp\|Q9SVB7\|WRK13_ARATH	1.6e-35	71.15	Probable WRKY transcription factor 13 OS=Arabidopsis thaliana OX=3702 GN=WRKY13 ...	[more]
sp\|Q8GY11\|WRK43_ARATH	1.3e-26	65.43	Probable WRKY transcription factor 43 OS=Arabidopsis thaliana OX=3702 GN=WRKY43 ...	[more]
sp\|Q9FFS3\|WRK24_ARATH	5.0e-26	62.35	Probable WRKY transcription factor 24 OS=Arabidopsis thaliana OX=3702 GN=WRKY24 ...	[more]
sp\|Q8VWQ4\|WRK56_ARATH	6.6e-26	63.95	Probable WRKY transcription factor 56 OS=Arabidopsis thaliana OX=3702 GN=WRKY56 ...	[more]

BLAST of MELO3C005937.2 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3AVD7\|A0A1S3AVD7_CUCME	5.3e-113	100.00	probable WRKY transcription factor 12 OS=Cucumis melo OX=3656 GN=LOC103483097 PE...	[more]
tr\|A0A0A0L3J0\|A0A0A0L3J0_CUCSA	2.2e-111	99.09	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G116700 PE=4 SV=1	[more]
tr\|A0A1U6ZIF2\|A0A1U6ZIF2_9ROSI	1.2e-72	71.68	probable WRKY transcription factor 12 OS=Juglans regia OX=51240 GN=WRKY12 PE=2 S...	[more]
tr\|A0A2P4K7B9\|A0A2P4K7B9_QUESU	6.5e-71	71.88	Putative wrky transcription factor 12 OS=Quercus suber OX=58331 GN=CFP56_57221 P...	[more]
tr\|A0A1S3VC17\|A0A1S3VC17_VIGRR	8.5e-71	72.32	probable WRKY transcription factor 12 OS=Vigna radiata var. radiata OX=3916 GN=L...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0043565	sequence-specific DNA binding
GO:0003700	transcription factor activity, sequence-specific DNA binding

Vocabulary: **Biological Process**
Term	Definition
GO:0006355	regulation of transcription, DNA-templated

Vocabulary: **INTERPRO**
Term	Definition
IPR036576	WRKY_dom_sf
IPR003657	WRKY_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
biological_process	GO:0006241	CTP biosynthetic process
biological_process	GO:0006183	GTP biosynthetic process
biological_process	GO:0006165	nucleoside diphosphate phosphorylation
biological_process	GO:0006144	purine nucleobase metabolic process
biological_process	GO:0006206	pyrimidine nucleobase metabolic process
biological_process	GO:0006228	UTP biosynthetic process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0005667	transcription factor complex
cellular_component	GO:0005634	nucleus
molecular_function	GO:0043565	sequence-specific DNA binding
molecular_function	GO:0003700	transcription factor activity, sequence-specific DNA binding
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0004550	nucleoside diphosphate kinase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C005937.2.1	MELO3C005937.2.1	mRNA

InterPro

Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003657	WRKY domain	SMART	SM00774	WRKY_cls	coord: 146..205 e-value: 6.5E-38 score: 142.0
IPR003657	WRKY domain	PFAM	PF03106	WRKY	coord: 147..203 e-value: 2.8E-25 score: 88.3
IPR003657	WRKY domain	PROSITE	PS50811	WRKY	coord: 141..203 score: 29.608
IPR036576	WRKY domain superfamily	GENE3D	G3DSA:2.20.25.80		coord: 132..206 e-value: 5.8E-32 score: 111.2
IPR036576	WRKY domain superfamily	SUPERFAMILY	SSF118290	WRKY DNA-binding domain	coord: 138..204
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 201..220
None	No IPR available	PANTHER	PTHR31221	FAMILY NOT NAMED	coord: 45..211
None	No IPR available	PANTHER	PTHR31221:SF17	WRKY TRANSCRIPTION FACTOR 12-RELATED	coord: 45..211

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
MELO3C005937.2	Csa3G116700	Cucumber (Chinese Long) v2	cumedB223
MELO3C005937.2	CSPI03G07040	Wild cucumber (PI 183967)	cpimedB224
MELO3C005937.2	Cucsa.260060	Cucumber (Gy14) v1	cgymedB432
MELO3C005937.2	CmaCh06G009350	Cucurbita maxima (Rimu)	cmamedB863
MELO3C005937.2	CmoCh06G009630	Cucurbita moschata (Rifu)	cmomedB857
MELO3C005937.2	Lsi05G022330	Bottle gourd (USVL1VR-Ls)	lsimedB396
MELO3C005937.2	Cp4.1LG08g00210	Cucurbita pepo (Zucchini)	cpemedB951
MELO3C005937.2	CsGy3G007180	Cucumber (Gy14) v2	cgybmedB201
MELO3C005937.2	Cla021067	Watermelon (97103) v1	medwmB447
MELO3C005937.2	ClCG05G000090	Watermelon (Charleston Gray)	medwcgB416
MELO3C005937.2	Cla97C05G080000	Watermelon (97103) v2	medwmbB423
MELO3C005937.2	Bhi01G000457	Wax gourd	medwgoB542
MELO3C005937.2	Carg25067	Silver-seed gourd	carmedB0995
MELO3C005937.2	CsaV3_3G007160	Cucumber (Chinese Long) v3	cucmedB230

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:

None