CsaV3_3G007160 (gene) Cucumber (Chinese Long) v3
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.GGGGGGGGGAGGGGATCTTTCTTTTTCTTTGTTTGTTTGGCATTTGGTTTTTGCTTTTGCTTTGCTTTCTTGGGATCACTTTCCTTGGTATAATCATAGTGAGAAAGACGAATAATGGAAACTGGAACCCAGACCCAAAGATCATCAGGGAGAGGGGAGGATTATGAAGTTCAAGTGTCGTTCCACCTCTCAAATGATCCACACCACATCCACGAAATGGGATTTGTGCAGTTGGAAGAGCACAGCCAGGTTTTGAGCTTCTTGGCACCCAACAACAACAACAACACCACCAATATGCCACCTCCTCCCTTTACTACTACTTCTCCTCACTCCAACATCCTCCCTCGACCACCTTCTTGGACTAATCACCAGGTACTAACTACACTAACTACTAACTACTATTACTATTAATTTGCTCACCTTTTTTCTACTCGATTAATATACATGTATTAAGTTGTCATCCACTAATTCCTATCAGCTGCCCGGAACACTGGATCCCAAGCCCGGTAACGATGAAAACTGCACGGCTACTGCTACTGATGCCACCAATTCATGGTATACACAAATACAACAAAACCCTAATTATTACATATTGTTTGCACGTACAGTGATTGAGTTAGGTAGGAATGAATTAATATGAATATATACATGATCATGCTCTTAATTTGCACTGCAGGTGGAGAAACACAAACGCCGATAAGAGTAAGGTGAAGGTAAGGAGAAAGCTGAGAGAGCCACGTTTCTGTTTTCAGACAAGAAGCGATGTTGATGTGCTGGACGATGGCTATAAATGGAGAAAATATGGCCAAAAAGTTGTCAAGAACAGCCTTCATCCTAGGTACTACCCATCCTTACCTCCTTTTCCGATCCTCCTCCTCCTCCTCTTCTTCTTCTTTCTTTTAGTATATATCACATCCTTCTCTCGCATCGCATGCACCAGTAATGCCACCCAAACCCTTATGTTCTTTGCTAATATAACATCCACCATTCACTTTTCAATTATATCATCACTTCTCTCCCAATATCCCTACCCTAATTTTGAATTTAATTTATCTATACTACTTTAGCTTCTTCATGATGGCATATTAATTTCATGCATCATCAAGTCTCCTTGCTATTTTGATATCGAAATGAGATTAATTATTTTTTTTTATCTAGATTCACGAGTGTAGAATAGAACTAATTATTATTTTTATCTAGATTCAAGAGTGTAGAATAGAACCGATTAAAGTTGTATGAAATGTTGGGAGAGATTGATTAGTTATGATGCAAATTAAGGCATACGGATTATTGTCATAAGTTGCATTGCATTGTATGTGTGTATGTATGTATATATGTATAGCATATATGTATTATCACGAGTTGTTGATGATGCGCGAGAGAGAGAGGTTAAAATGAGAAAATGCACGAATGGAATGATAAAACAATTGATTAGTTAGTATAGAAAATAGATATACATATACATGTACATGTACATGTATGTAAAGAGAGAGGATATAATAATTAGGAGAAAGAGAAGTGAAGAGGGGTTTTGGGGGTTTGGGTAGTTCACAGTTCAGTTTCAGTAGTAGGCAGATTGGGAATGATTATGTTATATTCTCTTCACCAGTGCCATCATTATTGATTTGGGGATTTTGGTTATAGGTGGCCGCCCCCCCAAGGCCAAGGCCCAGAACAACTACCAGTCATCCACACACACACACACACACATATATACCTATATTCTTCTATTTCTAATTTTGACTACTTTTTCTTTACTCTCTGCACAACACAACAACATATCCATTCATTTCATTTTTGTTTCTATGGTGATTTAATATGCGAAGGTAGGATGAGAACAAATAATAATATTCAAGGGTTAAATAATGATAGTGATTAATAATTTGCAGAAGCTACTATCGTTGCACGCATAGCAACTGCCGAGTGAAGAAGAGGGTAGAGCGACTGTCGGAGGATTGCCGGATGGTAATAACCACTTACGAAGGTAGACACAACCACACTCCTTGTGATGACTCCAATTCTTCGGAGCACGAACCCTTTACATCCTTCTGACTTCCGGCTCATTAATTCCCCAACTCCCAATAACTTTTTTTTTTCTTTTATATATATATAATATATATATAATTTTCTTTTTACATCCCTGCCTTCCCTAATTTCATTTCCCCCTTTCCTTTCTTAATTTCCCTTTTCATTGCAGCTTGTATAATTATTATTATTATTATTATTATTATTTCTTTCACTTTCTAAGCAAAATATCTGCCCCTCTGTATTTATTTGTTTAGAGATAAGACGCACATGAGAATATGAGATGGATTCCACTCCACTCCACTCCAATTTCTACCTATCCTATTACTGTTTACTATTATTACTCCACCCCTCACCCCCTCTTTCTTCTTCTCACCCTACTTTTTATGATATGATTTACTAATACTTCGTTCTGGATCACACAATCTGATCAATGCTGGGTGGCCTGCCCTCGGCCTGTCACCAGGCCCAGCCCACTTCCAAATTAAACCTCTTGGCCCACCGCCCATTGTCGCTATCCCATTCCATTTAATATTCCCAACCTTCCCTTTTTCTTTCCAATACGACGCTTCTCCAATATACCATTCCTGCCCTCCATGTTTCCTTTTTACTGCTTTCTTATATCTATAACACACCTTCTACAGTCTTTTGGCTGGGAATGCTGCATATACGAATGAGATTCTAAGATTTCGTTGATGTTATTTCAGATCACTACATCCTTAAGTCTTCTTCTTAGTTAATTTTCTCTGGACCAACTGTTAAGAGTTGTCATTCCATGCTCGTTATTTTCAGTTTCTTTTCCTAATCCTAACTGTGTGGTTTGAGAAGATCGTCGTCTATGGGGTGAATTCGACTCTTTTTTTTTATTATTTGTTGCTGTCTTAATTTTCTATCCAATACGTTGTACTACAAAAAACTGTAGGACTTTTCTATTTGAATCTTCCTATCTATTTTGACTCATTTATTCGACTCTAA ATGGAAACTGGAACCCAGACCCAAAGATCATCAGGGAGAGGGGAGGATTATGAAGTTCAAGTGTCGTTCCACCTCTCAAATGATCCACACCACATCCACGAAATGGGATTTGTGCAGTTGGAAGAGCACAGCCAGGTTTTGAGCTTCTTGGCACCCAACAACAACAACAACACCACCAATATGCCACCTCCTCCCTTTACTACTACTTCTCCTCACTCCAACATCCTCCCTCGACCACCTTCTTGGACTAATCACCAGCTGCCCGGAACACTGGATCCCAAGCCCGGTAACGATGAAAACTGCACGGCTACTGCTACTGATGCCACCAATTCATGGTGGAGAAACACAAACGCCGATAAGAGTAAGGTGAAGGTAAGGAGAAAGCTGAGAGAGCCACGTTTCTGTTTTCAGACAAGAAGCGATGTTGATGTGCTGGACGATGGCTATAAATGGAGAAAATATGGCCAAAAAGTTGTCAAGAACAGCCTTCATCCTAGAAGCTACTATCGTTGCACGCATAGCAACTGCCGAGTGAAGAAGAGGGTAGAGCGACTGTCGGAGGATTGCCGGATGGTAATAACCACTTACGAAGGTAGACACAACCACACTCCTTGTGATGACTCCAATTCTTCGGAGCACGAACCCTTTACATCCTTCTGA ATGGAAACTGGAACCCAGACCCAAAGATCATCAGGGAGAGGGGAGGATTATGAAGTTCAAGTGTCGTTCCACCTCTCAAATGATCCACACCACATCCACGAAATGGGATTTGTGCAGTTGGAAGAGCACAGCCAGGTTTTGAGCTTCTTGGCACCCAACAACAACAACAACACCACCAATATGCCACCTCCTCCCTTTACTACTACTTCTCCTCACTCCAACATCCTCCCTCGACCACCTTCTTGGACTAATCACCAGCTGCCCGGAACACTGGATCCCAAGCCCGGTAACGATGAAAACTGCACGGCTACTGCTACTGATGCCACCAATTCATGGTGGAGAAACACAAACGCCGATAAGAGTAAGGTGAAGGTAAGGAGAAAGCTGAGAGAGCCACGTTTCTGTTTTCAGACAAGAAGCGATGTTGATGTGCTGGACGATGGCTATAAATGGAGAAAATATGGCCAAAAAGTTGTCAAGAACAGCCTTCATCCTAGAAGCTACTATCGTTGCACGCATAGCAACTGCCGAGTGAAGAAGAGGGTAGAGCGACTGTCGGAGGATTGCCGGATGGTAATAACCACTTACGAAGGTAGACACAACCACACTCCTTGTGATGACTCCAATTCTTCGGAGCACGAACCCTTTACATCCTTCTGA METGTQTQRSSGRGEDYEVQVSFHLSNDPHHIHEMGFVQLEEHSQVLSFLAPNNNNNTTNMPPPPFTTTSPHSNILPRPPSWTNHQLPGTLDPKPGNDENCTATATDATNSWWRNTNADKSKVKVRRKLREPRFCFQTRSDVDVLDDGYKWRKYGQKVVKNSLHPRSYYRCTHSNCRVKKRVERLSEDCRMVITTYEGRHNHTPCDDSNSSEHEPFTSF
BLAST of CsaV3_3G007160 vs. NCBI nr
Match: XP_004133758.1 (PREDICTED: probable WRKY transcription factor 12 [Cucumis sativus] >KGN56333.1 hypothetical protein Csa_3G116700 [Cucumis sativus]) HSP 1 Score: 417.9 bits (1073), Expect = 2.1e-113 Identity = 219/219 (100.00%), Postives = 219/219 (100.00%), Query Frame = 0
BLAST of CsaV3_3G007160 vs. NCBI nr
Match: XP_008437760.1 (PREDICTED: probable WRKY transcription factor 12 [Cucumis melo]) HSP 1 Score: 411.8 bits (1057), Expect = 1.5e-111 Identity = 218/220 (99.09%), Postives = 219/220 (99.55%), Query Frame = 0
BLAST of CsaV3_3G007160 vs. NCBI nr
Match: XP_022924619.1 (probable WRKY transcription factor 12 [Cucurbita moschata]) HSP 1 Score: 315.8 bits (808), Expect = 1.1e-82 Identity = 160/222 (72.07%), Postives = 179/222 (80.63%), Query Frame = 0
BLAST of CsaV3_3G007160 vs. NCBI nr
Match: XP_022979595.1 (probable WRKY transcription factor 12 [Cucurbita maxima]) HSP 1 Score: 314.3 bits (804), Expect = 3.3e-82 Identity = 159/222 (71.62%), Postives = 179/222 (80.63%), Query Frame = 0
BLAST of CsaV3_3G007160 vs. NCBI nr
Match: XP_023527795.1 (probable WRKY transcription factor 12 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 314.3 bits (804), Expect = 3.3e-82 Identity = 159/222 (71.62%), Postives = 178/222 (80.18%), Query Frame = 0
BLAST of CsaV3_3G007160 vs. TAIR10
Match: AT2G44745.1 (WRKY family transcription factor) HSP 1 Score: 191.4 bits (485), Expect = 5.8e-49 Identity = 87/100 (87.00%), Postives = 94/100 (94.00%), Query Frame = 0
BLAST of CsaV3_3G007160 vs. TAIR10
Match: AT4G39410.1 (WRKY DNA-binding protein 13) HSP 1 Score: 151.0 bits (380), Expect = 8.7e-37 Identity = 73/104 (70.19%), Postives = 85/104 (81.73%), Query Frame = 0
BLAST of CsaV3_3G007160 vs. TAIR10
Match: AT2G46130.1 (WRKY DNA-binding protein 43) HSP 1 Score: 121.3 bits (303), Expect = 7.3e-28 Identity = 53/81 (65.43%), Postives = 68/81 (83.95%), Query Frame = 0
BLAST of CsaV3_3G007160 vs. TAIR10
Match: AT5G41570.1 (WRKY DNA-binding protein 24) HSP 1 Score: 119.4 bits (298), Expect = 2.8e-27 Identity = 53/85 (62.35%), Postives = 68/85 (80.00%), Query Frame = 0
BLAST of CsaV3_3G007160 vs. TAIR10
Match: AT1G69310.1 (WRKY DNA-binding protein 57) HSP 1 Score: 119.0 bits (297), Expect = 3.6e-27 Identity = 53/76 (69.74%), Postives = 64/76 (84.21%), Query Frame = 0
BLAST of CsaV3_3G007160 vs. Swiss-Prot
Match: sp|Q93WY4|WRK12_ARATH (Probable WRKY transcription factor 12 OS=Arabidopsis thaliana OX=3702 GN=WRKY12 PE=2 SV=1) HSP 1 Score: 191.4 bits (485), Expect = 1.0e-47 Identity = 87/100 (87.00%), Postives = 94/100 (94.00%), Query Frame = 0
BLAST of CsaV3_3G007160 vs. Swiss-Prot
Match: sp|Q9SVB7|WRK13_ARATH (Probable WRKY transcription factor 13 OS=Arabidopsis thaliana OX=3702 GN=WRKY13 PE=2 SV=1) HSP 1 Score: 151.0 bits (380), Expect = 1.6e-35 Identity = 73/104 (70.19%), Postives = 85/104 (81.73%), Query Frame = 0
BLAST of CsaV3_3G007160 vs. Swiss-Prot
Match: sp|Q8GY11|WRK43_ARATH (Probable WRKY transcription factor 43 OS=Arabidopsis thaliana OX=3702 GN=WRKY43 PE=1 SV=1) HSP 1 Score: 121.3 bits (303), Expect = 1.3e-26 Identity = 53/81 (65.43%), Postives = 68/81 (83.95%), Query Frame = 0
BLAST of CsaV3_3G007160 vs. Swiss-Prot
Match: sp|Q9FFS3|WRK24_ARATH (Probable WRKY transcription factor 24 OS=Arabidopsis thaliana OX=3702 GN=WRKY24 PE=2 SV=1) HSP 1 Score: 119.4 bits (298), Expect = 5.0e-26 Identity = 53/85 (62.35%), Postives = 68/85 (80.00%), Query Frame = 0
BLAST of CsaV3_3G007160 vs. Swiss-Prot
Match: sp|Q8VWQ4|WRK56_ARATH (Probable WRKY transcription factor 56 OS=Arabidopsis thaliana OX=3702 GN=WRKY56 PE=2 SV=1) HSP 1 Score: 119.0 bits (297), Expect = 6.6e-26 Identity = 55/86 (63.95%), Postives = 67/86 (77.91%), Query Frame = 0
BLAST of CsaV3_3G007160 vs. TrEMBL
Match: tr|A0A0A0L3J0|A0A0A0L3J0_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G116700 PE=4 SV=1) HSP 1 Score: 417.9 bits (1073), Expect = 1.4e-113 Identity = 219/219 (100.00%), Postives = 219/219 (100.00%), Query Frame = 0
BLAST of CsaV3_3G007160 vs. TrEMBL
Match: tr|A0A1S3AVD7|A0A1S3AVD7_CUCME (probable WRKY transcription factor 12 OS=Cucumis melo OX=3656 GN=LOC103483097 PE=4 SV=1) HSP 1 Score: 411.8 bits (1057), Expect = 9.9e-112 Identity = 218/220 (99.09%), Postives = 219/220 (99.55%), Query Frame = 0
BLAST of CsaV3_3G007160 vs. TrEMBL
Match: tr|A0A1U6ZIF2|A0A1U6ZIF2_9ROSI (probable WRKY transcription factor 12 OS=Juglans regia OX=51240 GN=WRKY12 PE=2 SV=1) HSP 1 Score: 282.0 bits (720), Expect = 1.2e-72 Identity = 160/226 (70.80%), Postives = 176/226 (77.88%), Query Frame = 0
BLAST of CsaV3_3G007160 vs. TrEMBL
Match: tr|A0A061DUM5|A0A061DUM5_THECC (WRKY family transcription factor OS=Theobroma cacao OX=3641 GN=TCM_005744 PE=4 SV=1) HSP 1 Score: 278.1 bits (710), Expect = 1.7e-71 Identity = 139/204 (68.14%), Postives = 156/204 (76.47%), Query Frame = 0
BLAST of CsaV3_3G007160 vs. TrEMBL
Match: tr|A0A2P4K7B9|A0A2P4K7B9_QUESU (Putative wrky transcription factor 12 OS=Quercus suber OX=58331 GN=CFP56_57221 PE=4 SV=1) HSP 1 Score: 276.2 bits (705), Expect = 6.5e-71 Identity = 159/224 (70.98%), Postives = 177/224 (79.02%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: None |