Cucsa.260060 (gene) Cucumber (Gy14) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cucsa.260060
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v1)
Description	DNA-binding WRKY
Location	scaffold02229 : 6346998 .. 6349594 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GGGGGGGGGAGGGGGATCTTTCTTTTTCTTTGTTTGTTTGGCATTTGGTTTTTGCTTTTGCTTTGCTTTCTTGGGATCACTTTCCTTGGTATAATCATAGTGAGAAAGACGAATAATGGAAACTGGAACCCAGACCCAAAGATCATCAGGGAGAGGGGAGGATTATGAAGTTCAAGTGTCGTTCCACCTCTCAAATGATCCACACCACATCCACGAAATGGGATTTGTGCAGTTGGAAGAGCACAGCCAGGTTTTGAGCTTCTTGGCACCCAACAACAACAACAACACCACCAATATGCCACCTCCTCCCTTTACTACTACTTCTCCTCACTCCAACATCCTCCCTCGACCACCTTCTTGGACTAATCACCAGGTACTAACTACACTAACTACTAACTACTATTACTATTAATTTGCTCACCTTTTTTCTACTCGATTAATATACATGTATTAAGTTGTCATCCACTAATTCCTATCAGCTGCCCGGAACACTGGATCCCAAGCCCGGTAACGATGAAAACTGCACGGCTACTGCTACTGATGCCACCAATTCATGGTATACACAAATACAACAAAACCCTAATTATTACATATTGTTTGCACGTACAGTGATTGAGTTAGGTAGGAATGAATTAATATGAATATATACATGATCATGCTCTTAATTTGCACTGCAGGTGGAGAAACACAAACGCCGATAAGAGTAAGGTGAAGGTAAGGAGAAAGCTGAGAGAGCCACGTTTCTGTTTTCAGACAAGAAGCGATGTTGATGTGCTGGACGATGGCTATAAATGGAGAAAATATGGCCAAAAAGTTGTCAAGAACAGCCTTCATCCTAGGTACTACCCATCCTTACCTCCTTTTCCGATCCTCCTCCTCCTCCTCTTCTTCTTCTTTCTTTTAGTATATATCACATCCTTCTCTCGCATCGCATGCACCAGTAATGCCACCCAAACCCTTATGTTCTTTGCTAATATAACATCCACCATTCACTTTTCAATTATATCATCACTTCTCTCCCAATATCCCTACCCTAATTTTGAATTTAATTTATCTATACTACTTTAGCTTCTTCATGATGGCATATTAATTTCATGCATCATCAAGTCTCCTTGCTATTTTGATATCGAAATGAGATTAATTATTTTTTTTTATCTAGATTCACGAGTGTAGAATAGAACTAATTATTATTTTTATCTAGATTCAAGAGTGTAGAATAGAACCGATTAAAGTTGTATGAAATGTTGGGAGAGATTGATTAGTTATGATGCAAATTAAGGCATACGGATTATTGTCATAAGTTGCATTGCATTGTATGTGTGTATGTATGTATATATGTATAGCATATATGTATTATCACGAGTTGTTGATGATGCGCGAGAGAGAGAGGTTAAAATGAGAAAATGCACGAATGGAATGATAAAACAATTGATTAGTTAGTATAGAAAATAGATATACATATACATGTACATGTACATGTATGTAAAGAGAGAGGATATAATAATTAGGAGAAAGAGAAGTGAAGAGGGGTTTTGGGGGTTTGGGTAGTTCACAGTTCAGTTTCAGTAGTAGGCAGATTGGGAATGATTATGTTATATTCTCTTCACCAGTGCCATCATTATTGATTTGGGGATTTTGGTTATAGGTGGCCGCCCCCCAAGGCCAAGGCCCAGAACAACTACCAGTCATCCACACACACACACACACACATATATACCTATATTCTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACACACACACACACACACATATATACCTATATTCTTCTATTTCTAATTTTGACTACTTTTTCTTTACTCTCTGCACAACACAACAACATATCCATTCATTTCATTTTTGTTTCTATGGTGATTTAATATGCGAAGGTAGGATGAGAACAAATAATAATATTCAAGGGTTAAATAATGATAGTGATTAATAATTTGCAGAAGCTACTATCGTTGCACGCATAGCAACTGCCGAGTGAAGAAGAGGGTAGAGCGACTGTCGGAGGATTGCCGGATGGTAATAACCACTTACGAAGGTAGACACAACCACACTCCTTGTGATGACTCCAATTCTTCGGAGCACGAACCCTTTACATCCTTCTGACTTCCGGCTCATTAATTCCCCAACTCCCAATAACTTTTTTTTTCTTTTATATATATATAATATATATATAATTTTCTTTTTACATCCCTGCCTTCCCTAATTTCATTTCCCCCTTTCCTTTCTTAATTTCCCTTTTCATTGCAGCTTGTATAATTATTATTATTATTATTATTATTATTTCTTTCACTTTCTAAGCAAAATATCTGCCCCTCTGTATTTATTTGTTTAGAGATAAGAC

mRNA sequence

gggggggggagggggATCTTTCTTTTTCTTTGTTTGTTTGGCATTTGGTTTTTGCTTTTGCTTTGCTTTCTTGGGATCACTTTCCTTGGTATAATCATAGTGAGAAAGACGAATAATGGAAACTGGAACCCAGACCCAAAGATCATCAGGGAGAGGGGAGGATTATGAAGTTCAAGTGTCGTTCCACCTCTCAAATGATCCACACCACATCCACGAAATGGGATTTGTGCAGTTGGAAGAGCACAGCCAGGTTTTGAGCTTCTTGGCACCCAACAACAACAACAACACCACCAATATGCCACCTCCTCCCTTTACTACTACTTCTCCTCACTCCAACATCCTCCCTCGACCACCTTCTTGGACTAATCACCAGCTGCCCGGAACACTGGATCCCAAGCCCGGTAACGATGAAAACTGCACGGCTACTGCTACTGATGCCACCAATTCATGGTGGAGAAACACAAACGCCGATAAGAGTAAGGTGAAGGTAAGGAGAAAGCTGAGAGAGCCACGTTTCTGTTTTCAGACAAGAAGCGATGTTGATGTGCTGGACGATGGCTATAAATGGAGAAAATATGGCCAAAAAGTTGTCAAGAACAGCCTTCATCCTAGAAGCTACTATCGTTGCACGCATAGCAACTGCCGAGTGAAGAAGAGGGTAGAGCGACTGTCGGAGGATTGCCGGATGGTAATAACCACTTACGAAGGTAGACACAACCACACTCCTTGTGATGACTCCAATTCTTCGGAGCACGAACCCTTTACATCCTTCTGACTTCCGGCTCATTAATTCCCCAACTCCCAATAACtttttttttcttttatatatatataatatatatataattttCTTTTTACATCCCTGCCTTCCCTAATTTCATTTCCCCCTTTCCTTTCTTAATTTCCCTTTTCATTGCAGCTTGtataattattattattattattattattattTCTTTCACTTTCTAAGCAAAATATCTGCCCCTCTGTATTTATTTGTTTAGAGATAAGAC

Coding sequence (CDS)

ATGGAAACTGGAACCCAGACCCAAAGATCATCAGGGAGAGGGGAGGATTATGAAGTTCAAGTGTCGTTCCACCTCTCAAATGATCCACACCACATCCACGAAATGGGATTTGTGCAGTTGGAAGAGCACAGCCAGGTTTTGAGCTTCTTGGCACCCAACAACAACAACAACACCACCAATATGCCACCTCCTCCCTTTACTACTACTTCTCCTCACTCCAACATCCTCCCTCGACCACCTTCTTGGACTAATCACCAGCTGCCCGGAACACTGGATCCCAAGCCCGGTAACGATGAAAACTGCACGGCTACTGCTACTGATGCCACCAATTCATGGTGGAGAAACACAAACGCCGATAAGAGTAAGGTGAAGGTAAGGAGAAAGCTGAGAGAGCCACGTTTCTGTTTTCAGACAAGAAGCGATGTTGATGTGCTGGACGATGGCTATAAATGGAGAAAATATGGCCAAAAAGTTGTCAAGAACAGCCTTCATCCTAGAAGCTACTATCGTTGCACGCATAGCAACTGCCGAGTGAAGAAGAGGGTAGAGCGACTGTCGGAGGATTGCCGGATGGTAATAACCACTTACGAAGGTAGACACAACCACACTCCTTGTGATGACTCCAATTCTTCGGAGCACGAACCCTTTACATCCTTCTGA

Protein sequence

METGTQTQRSSGRGEDYEVQVSFHLSNDPHHIHEMGFVQLEEHSQVLSFLAPNNNNNTTNMPPPPFTTTSPHSNILPRPPSWTNHQLPGTLDPKPGNDENCTATATDATNSWWRNTNADKSKVKVRRKLREPRFCFQTRSDVDVLDDGYKWRKYGQKVVKNSLHPRSYYRCTHSNCRVKKRVERLSEDCRMVITTYEGRHNHTPCDDSNSSEHEPFTSF*

Homology

[Close]

BLAST of Cucsa.260060 vs. Swiss-Prot
Match: WRK12_ARATH (Probable WRKY transcription factor 12 OS=Arabidopsis thaliana GN=WRKY12 PE=2 SV=1)

HSP 1 Score: 212.6 bits (540), Expect = 4.3e-54
Identity = 112/192 (58.33%), Postives = 137/192 (71.35%), Query Frame = 1


Query: 35  MGFVQLEEHSQVLSFLAPNNNNNTTNMPPPPFTTTSPHSNILPRPPSWTNHQLPGTLDPK 94
           M F+   E + VL+F + +++++ ++   P   ++S  +   P   S  N Q  G L  K
Sbjct: 28  MNFLVPFEETNVLTFFSSSSSSSLSSPSFPIHNSSSTTTTHAPLGFS-NNLQGGGPLGSK 87

Query: 95  PGNDENCT---ATATDA-TNSWWRNTNAD---KSKVKVRRKLREPRFCFQTRSDVDVLDD 154
             ND+       T  DA +NSWWR+ +     K+KVK+RRKLREPRFCFQT+SDVDVLDD
Sbjct: 88  VVNDDQENFGGGTNNDAHSNSWWRSNSGSGDMKNKVKIRRKLREPRFCFQTKSDVDVLDD 147

Query: 155 GYKWRKYGQKVVKNSLHPRSYYRCTHSNCRVKKRVERLSEDCRMVITTYEGRHNHTPCDD 214
           GYKWRKYGQKVVKNSLHPRSYYRCTH+NCRVKKRVERLSEDCRMVITTYEGRHNH P DD
Sbjct: 148 GYKWRKYGQKVVKNSLHPRSYYRCTHNNCRVKKRVERLSEDCRMVITTYEGRHNHIPSDD 207

Query: 215 SNSSEHEPFTSF 220
           S S +H+  +SF
Sbjct: 208 STSPDHDCLSSF 218

[Close]

BLAST of Cucsa.260060 vs. Swiss-Prot
Match: WRK13_ARATH (Probable WRKY transcription factor 13 OS=Arabidopsis thaliana GN=WRKY13 PE=2 SV=1)

HSP 1 Score: 152.5 bits (384), Expect = 5.3e-36
Identity = 73/104 (70.19%), Postives = 85/104 (81.73%), Query Frame = 1


Query: 122 KVKVRRKLREPRFCFQTRSDVDVLDDGYKWRKYGQKVVKNSLHPRSYYRCTHSNCRVKKR 181
           K+K RRK+REPRFCF+T S+VDVLDDGY+WRKYGQKVVKN+ HPRSYYRCT   CRVKKR
Sbjct: 199 KLKTRRKVREPRFCFKTLSEVDVLDDGYRWRKYGQKVVKNTQHPRSYYRCTQDKCRVKKR 258

Query: 182 VERLSEDCRMVITTYEGRHNHTPC----DDSNSSE--HEPFTSF 220
           VERL++D RMVITTYEGRH H+P     DDS S+   H P ++F
Sbjct: 259 VERLADDPRMVITTYEGRHLHSPSNHLDDDSLSTSHLHPPLSNF 302

[Close]

BLAST of Cucsa.260060 vs. Swiss-Prot
Match: WRK48_ARATH (Probable WRKY transcription factor 48 OS=Arabidopsis thaliana GN=WRKY48 PE=2 SV=1)

HSP 1 Score: 131.0 bits (328), Expect = 1.6e-29
Identity = 79/196 (40.31%), Postives = 102/196 (52.04%), Query Frame = 1


Query: 24  HLSNDPHHI-------HEMGFVQLEEHSQVLSFLAPNNNNNT---TNMPPPPFTTTSPHS 83
           H SN+P+         H+             +F  PNNNNNT   T++P P     +  S
Sbjct: 86  HSSNNPNSFLDLLRQDHQFASSSNSSSFSFDAFPLPNNNNNTSFFTDLPLPQ----AESS 145

Query: 84  NILPRPPSWTNHQLPGTLDPKPGNDENCTATAT-------DATNSWWRNTNADKSKVKVR 143
            ++   P+  N     +   +  ND N     T       D            K+K K +
Sbjct: 146 EVVNTTPTSPNSTSVSSSSNEAANDNNSGKEVTVKDQEEGDQQQEQKGTKPQLKAKKKNQ 205

Query: 144 RKLREPRFCFQTRSDVDVLDDGYKWRKYGQKVVKNSLHPRSYYRCTHSNCRVKKRVERLS 203
           +K RE RF F T+SD+D LDDGY+WRKYGQK VKNS +PRSYYRCT   C VKKRVER S
Sbjct: 206 KKAREARFAFLTKSDIDNLDDGYRWRKYGQKAVKNSPYPRSYYRCTTVGCGVKKRVERSS 265

[Close]

BLAST of Cucsa.260060 vs. Swiss-Prot
Match: WRK57_ARATH (Probable WRKY transcription factor 57 OS=Arabidopsis thaliana GN=WRKY57 PE=2 SV=1)

HSP 1 Score: 130.6 bits (327), Expect = 2.1e-29
Identity = 72/161 (44.72%), Postives = 94/161 (58.39%), Query Frame = 1


Query: 42  EHSQVLSFLAPNNNNNTTNMPPPPFTTTSPHSNILPRPPSWTNHQLPGTLDPKPGNDENC 101
           +H   L F   ++   TT + P   T++   S  +    + TN+    T        EN 
Sbjct: 49  DHPHSLRF--DSDLTQTTGVKPTTVTSSCSSSAAVSVAVTSTNNNPSATSSSSEDPAENS 108

Query: 102 TATATDATNSWWRNTNADKSKVKVRRKLREPRFCFQTRSDVDVLDDGYKWRKYGQKVVKN 161
           TA+A              K K K ++++R+PRF F T+SDVD L+DGY+WRKYGQK VKN
Sbjct: 109 TASAEKTPPP----ETPVKEKKKAQKRIRQPRFAFMTKSDVDNLEDGYRWRKYGQKAVKN 168

Query: 162 SLHPRSYYRCTHSNCRVKKRVERLSEDCRMVITTYEGRHNH 203
           S  PRSYYRCT+S C VKKRVER S+D  +VITTYEG+H H
Sbjct: 169 SPFPRSYYRCTNSRCTVKKRVERSSDDPSIVITTYEGQHCH 203

[Close]

BLAST of Cucsa.260060 vs. Swiss-Prot
Match: WRK56_ARATH (Probable WRKY transcription factor 56 OS=Arabidopsis thaliana GN=WRKY56 PE=2 SV=1)

HSP 1 Score: 123.6 bits (309), Expect = 2.6e-27
Identity = 70/173 (40.46%), Postives = 98/173 (56.65%), Query Frame = 1


Query: 40  LEEHSQVLSFLAPNNNNNTTNMPPPPFTTTSPH----SNILPRPPSWT--NHQLPGTLDP 99
           ++  + +L+     NNN  +++        +P      ++ P   S T   + L   L+ 
Sbjct: 4   VDNTNPMLTLEEGENNNPFSSLDDKTLMMMAPSLIFSGDVGPSSSSCTPAGYHLSAQLEN 63

Query: 100 KPGNDENCTATATDATNSWWRNTNADKSKVKVRRKLREPRFCFQTRSDVDVLDDGYKWRK 159
             G         ++ +N+   N N +K K K  R L   R  F TRSD DVLDDGY+WRK
Sbjct: 64  FRGGGGEMGGLVSNNSNNSDHNKNCNKGKGK--RTLAMQRIAFHTRSDDDVLDDGYRWRK 123

Query: 160 YGQKVVKNSLHPRSYYRCTHSNCRVKKRVERLSEDCRMVITTYEGRHNHTPCD 207
           YGQK VKN+ HPRSYYRCT+  C VKK+V+RL++D  +V+TTYEG HNH PC+
Sbjct: 124 YGQKSVKNNAHPRSYYRCTYHTCNVKKQVQRLAKDPNVVVTTYEGVHNH-PCE 173

[Close]

BLAST of Cucsa.260060 vs. TrEMBL
Match: A0A0A0L3J0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G116700 PE=4 SV=1)

HSP 1 Score: 474.9 bits (1221), Expect = 5.2e-131
Identity = 219/219 (100.00%), Postives = 219/219 (100.00%), Query Frame = 1


Query: 1   METGTQTQRSSGRGEDYEVQVSFHLSNDPHHIHEMGFVQLEEHSQVLSFLAPNNNNNTTN 60
           METGTQTQRSSGRGEDYEVQVSFHLSNDPHHIHEMGFVQLEEHSQVLSFLAPNNNNNTTN
Sbjct: 1   METGTQTQRSSGRGEDYEVQVSFHLSNDPHHIHEMGFVQLEEHSQVLSFLAPNNNNNTTN 60

Query: 61  MPPPPFTTTSPHSNILPRPPSWTNHQLPGTLDPKPGNDENCTATATDATNSWWRNTNADK 120
           MPPPPFTTTSPHSNILPRPPSWTNHQLPGTLDPKPGNDENCTATATDATNSWWRNTNADK
Sbjct: 61  MPPPPFTTTSPHSNILPRPPSWTNHQLPGTLDPKPGNDENCTATATDATNSWWRNTNADK 120

Query: 121 SKVKVRRKLREPRFCFQTRSDVDVLDDGYKWRKYGQKVVKNSLHPRSYYRCTHSNCRVKK 180
           SKVKVRRKLREPRFCFQTRSDVDVLDDGYKWRKYGQKVVKNSLHPRSYYRCTHSNCRVKK
Sbjct: 121 SKVKVRRKLREPRFCFQTRSDVDVLDDGYKWRKYGQKVVKNSLHPRSYYRCTHSNCRVKK 180

Query: 181 RVERLSEDCRMVITTYEGRHNHTPCDDSNSSEHEPFTSF 220
           RVERLSEDCRMVITTYEGRHNHTPCDDSNSSEHEPFTSF
Sbjct: 181 RVERLSEDCRMVITTYEGRHNHTPCDDSNSSEHEPFTSF 219

[Close]

BLAST of Cucsa.260060 vs. TrEMBL
Match: A0A061DUM5_THECC (WRKY family transcription factor OS=Theobroma cacao GN=TCM_005744 PE=4 SV=1)

HSP 1 Score: 292.0 bits (746), Expect = 6.2e-76
Identity = 141/204 (69.12%), Postives = 163/204 (79.90%), Query Frame = 1


Query: 16  DYEVQVSFHLSNDPHHIHEMGFVQLEEHSQVLSFLAPNNNNNTTNMPPPPFTTTSPHSNI 75
           +YE+QVSF   + P  IHEMGFVQ EE+  V+SFLAP  +++  + P     + S  +N 
Sbjct: 9   NYELQVSF---STPQAIHEMGFVQFEENQAVMSFLAPAQSSHQISQPVNTAASISNSTNS 68

Query: 76  LPRPPSWTNHQLPGTLDPKPGNDENCTATATDATNSWWRNTNADKSKVKVRRKLREPRFC 135
                 ++++   GTLDPK  NDENC + A D  NSWWR++ ++KSKVKVRRKLREPRFC
Sbjct: 69  TAM--GFSHNDQVGTLDPKAVNDENCASNANDGNNSWWRSSASEKSKVKVRRKLREPRFC 128

Query: 136 FQTRSDVDVLDDGYKWRKYGQKVVKNSLHPRSYYRCTHSNCRVKKRVERLSEDCRMVITT 195
           FQTRSDVDVLDDGYKWRKYGQKVVKNSLHPRSYYRCTH+NCRVKKRVERLSEDCRMVITT
Sbjct: 129 FQTRSDVDVLDDGYKWRKYGQKVVKNSLHPRSYYRCTHNNCRVKKRVERLSEDCRMVITT 188

Query: 196 YEGRHNHTPCDDSNSSEHEPFTSF 220
           YEGRHNH+PCDDSNSSEHE FTSF
Sbjct: 189 YEGRHNHSPCDDSNSSEHECFTSF 207

[Close]

BLAST of Cucsa.260060 vs. TrEMBL
Match: F8RKQ9_MEDTR (STP OS=Medicago truncatula GN=MTR_8g007270 PE=2 SV=1)

HSP 1 Score: 290.4 bits (742), Expect = 1.8e-75
Identity = 147/223 (65.92%), Postives = 167/223 (74.89%), Query Frame = 1


Query: 16  DYEVQVSFHLSNDPHHIHEMGFVQLEEHSQVLSFLAP-------------NNNNNTTNMP 75
           +Y++QVSF  +N P  IHEMGFVQ EE+ QVLSFL+P             N+   TTN  
Sbjct: 9   NYDLQVSF--TNTPQAIHEMGFVQFEEN-QVLSFLSPSTQSQPSQLSQSLNSGRGTTNAT 68

Query: 76  PPPFTTTSP------HSNILPRPPSWTNHQLPGTLDPKPGNDENCTATATDATNSWWRNT 135
                TT+       H++++     W N Q+  TLDPK  +DENCT   +D  N+WWR+ 
Sbjct: 69  TGAAVTTTTVAAGFSHNDLVTTRTPWNNEQVR-TLDPKAVSDENCTGNTSDGNNTWWRSG 128

Query: 136 NADKSKVKVRRKLREPRFCFQTRSDVDVLDDGYKWRKYGQKVVKNSLHPRSYYRCTHSNC 195
            A+KSKVKVRRKLREPRFCFQTRSDVDVLDDGYKWRKYGQKVVKNSLHPRSYYRCTH+NC
Sbjct: 129 GAEKSKVKVRRKLREPRFCFQTRSDVDVLDDGYKWRKYGQKVVKNSLHPRSYYRCTHNNC 188

Query: 196 RVKKRVERLSEDCRMVITTYEGRHNHTPCDDSNSSEHEPFTSF 220
           RVKKRVERLSEDCRMVITTYEGRHNH+PCDDSNSSEHE FTSF
Sbjct: 189 RVKKRVERLSEDCRMVITTYEGRHNHSPCDDSNSSEHECFTSF 227

[Close]

BLAST of Cucsa.260060 vs. TrEMBL
Match: A0A0S3SVH6_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.09G016400 PE=4 SV=1)

HSP 1 Score: 290.0 bits (741), Expect = 2.4e-75
Identity = 149/228 (65.35%), Postives = 165/228 (72.37%), Query Frame = 1


Query: 12  GRGEDYEVQVSFHLSNDPHHIHEMGFVQLEEHSQVLSFLAPN--------------NNNN 71
           G    Y++QVSF  SN P  IHEMGFVQ EE+ QVLSFL P+               N  
Sbjct: 6   GVNPSYDLQVSF--SNTPQAIHEMGFVQFEEN-QVLSFLTPSAQSQSSQLSQSLTGGNTV 65

Query: 72  TTNMPPPPFTTTSPHSNI------LPRPPSWTNHQLPGTLDPKPGNDENCTATATDATNS 131
           T        TTT+   ++      L    SW N Q+  TLDPK  NDENCT   +D  N+
Sbjct: 66  TAATVTTTITTTTTSGSVGFNHNDLASRSSWNNEQVR-TLDPKAVNDENCTGNTSDGNNT 125

Query: 132 WWRNTNADKSKVKVRRKLREPRFCFQTRSDVDVLDDGYKWRKYGQKVVKNSLHPRSYYRC 191
           WWRN+ ++K+KVKVRRKLREPRFCFQTRSDVDVLDDGYKWRKYGQKVVKNSLHPRSYYRC
Sbjct: 126 WWRNSGSEKNKVKVRRKLREPRFCFQTRSDVDVLDDGYKWRKYGQKVVKNSLHPRSYYRC 185

Query: 192 THSNCRVKKRVERLSEDCRMVITTYEGRHNHTPCDDSNSSEHEPFTSF 220
           TH+NCRVKKRVERLSEDCRMVITTYEGRHNH+PCDDSNSSEHE FTSF
Sbjct: 186 THNNCRVKKRVERLSEDCRMVITTYEGRHNHSPCDDSNSSEHECFTSF 229

[Close]

BLAST of Cucsa.260060 vs. TrEMBL
Match: M5XNS0_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa022287mg PE=4 SV=1)

HSP 1 Score: 287.7 bits (735), Expect = 1.2e-74
Identity = 150/234 (64.10%), Postives = 173/234 (73.93%), Query Frame = 1


Query: 17  YEVQVSFHLSNDPHH-IHEMGFVQLEEH----SQVLSF---------LAPNNNNNTTNMP 76
           YEVQ+SF  + +P   IHEMGFVQ E+H    +QVLSF           PNN+++  +  
Sbjct: 11  YEVQISFSSTPNPQQSIHEMGFVQFEDHHPHHNQVLSFMAPSSHIQQQQPNNSHHPHHHQ 70

Query: 77  PPPF--------TTTS--------PHSNILPRPPSWTN-HQLPGTLDPKPGNDENCTATA 136
           P           TTTS         H+++L   PSW N +   GTLDPK  +DEN T  A
Sbjct: 71  PAELSSGASAAATTTSNGVTVGFSTHTDLLVARPSWNNSNDQVGTLDPKAISDENGTGNA 130

Query: 137 TDATNSWWRNTNADKSKVKVRRKLREPRFCFQTRSDVDVLDDGYKWRKYGQKVVKNSLHP 196
           +D +NSWWR+++++KSK+KVRRKLREPRFCFQTRSDVDVLDDGYKWRKYGQKVVKNSLHP
Sbjct: 131 SDCSNSWWRSSSSEKSKMKVRRKLREPRFCFQTRSDVDVLDDGYKWRKYGQKVVKNSLHP 190

Query: 197 RSYYRCTHSNCRVKKRVERLSEDCRMVITTYEGRHNHTPCDDSNSSEHEPFTSF 220
           RSYYRCTHSNCRVKKRVERLSEDCRMVITTYEGRHNHTPCDDSNSSEHE F+SF
Sbjct: 191 RSYYRCTHSNCRVKKRVERLSEDCRMVITTYEGRHNHTPCDDSNSSEHECFSSF 244

[Close]

BLAST of Cucsa.260060 vs. TAIR10
Match: AT2G44745.1 (AT2G44745.1 WRKY family transcription factor)

HSP 1 Score: 212.6 bits (540), Expect = 2.4e-55
Identity = 112/192 (58.33%), Postives = 137/192 (71.35%), Query Frame = 1


Query: 35  MGFVQLEEHSQVLSFLAPNNNNNTTNMPPPPFTTTSPHSNILPRPPSWTNHQLPGTLDPK 94
           M F+   E + VL+F + +++++ ++   P   ++S  +   P   S  N Q  G L  K
Sbjct: 28  MNFLVPFEETNVLTFFSSSSSSSLSSPSFPIHNSSSTTTTHAPLGFS-NNLQGGGPLGSK 87

Query: 95  PGNDENCT---ATATDA-TNSWWRNTNAD---KSKVKVRRKLREPRFCFQTRSDVDVLDD 154
             ND+       T  DA +NSWWR+ +     K+KVK+RRKLREPRFCFQT+SDVDVLDD
Sbjct: 88  VVNDDQENFGGGTNNDAHSNSWWRSNSGSGDMKNKVKIRRKLREPRFCFQTKSDVDVLDD 147

Query: 155 GYKWRKYGQKVVKNSLHPRSYYRCTHSNCRVKKRVERLSEDCRMVITTYEGRHNHTPCDD 214
           GYKWRKYGQKVVKNSLHPRSYYRCTH+NCRVKKRVERLSEDCRMVITTYEGRHNH P DD
Sbjct: 148 GYKWRKYGQKVVKNSLHPRSYYRCTHNNCRVKKRVERLSEDCRMVITTYEGRHNHIPSDD 207

Query: 215 SNSSEHEPFTSF 220
           S S +H+  +SF
Sbjct: 208 STSPDHDCLSSF 218

[Close]

BLAST of Cucsa.260060 vs. TAIR10
Match: AT4G39410.1 (AT4G39410.1 WRKY DNA-binding protein 13)

HSP 1 Score: 152.5 bits (384), Expect = 3.0e-37
Identity = 73/104 (70.19%), Postives = 85/104 (81.73%), Query Frame = 1


Query: 122 KVKVRRKLREPRFCFQTRSDVDVLDDGYKWRKYGQKVVKNSLHPRSYYRCTHSNCRVKKR 181
           K+K RRK+REPRFCF+T S+VDVLDDGY+WRKYGQKVVKN+ HPRSYYRCT   CRVKKR
Sbjct: 199 KLKTRRKVREPRFCFKTLSEVDVLDDGYRWRKYGQKVVKNTQHPRSYYRCTQDKCRVKKR 258

Query: 182 VERLSEDCRMVITTYEGRHNHTPC----DDSNSSE--HEPFTSF 220
           VERL++D RMVITTYEGRH H+P     DDS S+   H P ++F
Sbjct: 259 VERLADDPRMVITTYEGRHLHSPSNHLDDDSLSTSHLHPPLSNF 302

[Close]

BLAST of Cucsa.260060 vs. TAIR10
Match: AT5G49520.1 (AT5G49520.1 WRKY DNA-binding protein 48)

HSP 1 Score: 131.0 bits (328), Expect = 9.3e-31
Identity = 79/196 (40.31%), Postives = 102/196 (52.04%), Query Frame = 1


Query: 24  HLSNDPHHI-------HEMGFVQLEEHSQVLSFLAPNNNNNT---TNMPPPPFTTTSPHS 83
           H SN+P+         H+             +F  PNNNNNT   T++P P     +  S
Sbjct: 86  HSSNNPNSFLDLLRQDHQFASSSNSSSFSFDAFPLPNNNNNTSFFTDLPLPQ----AESS 145

Query: 84  NILPRPPSWTNHQLPGTLDPKPGNDENCTATAT-------DATNSWWRNTNADKSKVKVR 143
            ++   P+  N     +   +  ND N     T       D            K+K K +
Sbjct: 146 EVVNTTPTSPNSTSVSSSSNEAANDNNSGKEVTVKDQEEGDQQQEQKGTKPQLKAKKKNQ 205

Query: 144 RKLREPRFCFQTRSDVDVLDDGYKWRKYGQKVVKNSLHPRSYYRCTHSNCRVKKRVERLS 203
           +K RE RF F T+SD+D LDDGY+WRKYGQK VKNS +PRSYYRCT   C VKKRVER S
Sbjct: 206 KKAREARFAFLTKSDIDNLDDGYRWRKYGQKAVKNSPYPRSYYRCTTVGCGVKKRVERSS 265

[Close]

BLAST of Cucsa.260060 vs. TAIR10
Match: AT1G69310.1 (AT1G69310.1 WRKY DNA-binding protein 57)

HSP 1 Score: 130.6 bits (327), Expect = 1.2e-30
Identity = 72/161 (44.72%), Postives = 94/161 (58.39%), Query Frame = 1


Query: 42  EHSQVLSFLAPNNNNNTTNMPPPPFTTTSPHSNILPRPPSWTNHQLPGTLDPKPGNDENC 101
           +H   L F   ++   TT + P   T++   S  +    + TN+    T        EN 
Sbjct: 49  DHPHSLRF--DSDLTQTTGVKPTTVTSSCSSSAAVSVAVTSTNNNPSATSSSSEDPAENS 108

Query: 102 TATATDATNSWWRNTNADKSKVKVRRKLREPRFCFQTRSDVDVLDDGYKWRKYGQKVVKN 161
           TA+A              K K K ++++R+PRF F T+SDVD L+DGY+WRKYGQK VKN
Sbjct: 109 TASAEKTPPP----ETPVKEKKKAQKRIRQPRFAFMTKSDVDNLEDGYRWRKYGQKAVKN 168

Query: 162 SLHPRSYYRCTHSNCRVKKRVERLSEDCRMVITTYEGRHNH 203
           S  PRSYYRCT+S C VKKRVER S+D  +VITTYEG+H H
Sbjct: 169 SPFPRSYYRCTNSRCTVKKRVERSSDDPSIVITTYEGQHCH 203

[Close]

BLAST of Cucsa.260060 vs. TAIR10
Match: AT1G64000.1 (AT1G64000.1 WRKY DNA-binding protein 56)

HSP 1 Score: 123.6 bits (309), Expect = 1.5e-28
Identity = 70/173 (40.46%), Postives = 98/173 (56.65%), Query Frame = 1


Query: 40  LEEHSQVLSFLAPNNNNNTTNMPPPPFTTTSPH----SNILPRPPSWT--NHQLPGTLDP 99
           ++  + +L+     NNN  +++        +P      ++ P   S T   + L   L+ 
Sbjct: 4   VDNTNPMLTLEEGENNNPFSSLDDKTLMMMAPSLIFSGDVGPSSSSCTPAGYHLSAQLEN 63

Query: 100 KPGNDENCTATATDATNSWWRNTNADKSKVKVRRKLREPRFCFQTRSDVDVLDDGYKWRK 159
             G         ++ +N+   N N +K K K  R L   R  F TRSD DVLDDGY+WRK
Sbjct: 64  FRGGGGEMGGLVSNNSNNSDHNKNCNKGKGK--RTLAMQRIAFHTRSDDDVLDDGYRWRK 123

Query: 160 YGQKVVKNSLHPRSYYRCTHSNCRVKKRVERLSEDCRMVITTYEGRHNHTPCD 207
           YGQK VKN+ HPRSYYRCT+  C VKK+V+RL++D  +V+TTYEG HNH PC+
Sbjct: 124 YGQKSVKNNAHPRSYYRCTYHTCNVKKQVQRLAKDPNVVVTTYEGVHNH-PCE 173

[Close]

BLAST of Cucsa.260060 vs. NCBI nr
Match: gi|449431940|ref|XP_004133758.1| (PREDICTED: probable WRKY transcription factor 12 [Cucumis sativus])

HSP 1 Score: 474.9 bits (1221), Expect = 7.4e-131
Identity = 219/219 (100.00%), Postives = 219/219 (100.00%), Query Frame = 1


Query: 1   METGTQTQRSSGRGEDYEVQVSFHLSNDPHHIHEMGFVQLEEHSQVLSFLAPNNNNNTTN 60
           METGTQTQRSSGRGEDYEVQVSFHLSNDPHHIHEMGFVQLEEHSQVLSFLAPNNNNNTTN
Sbjct: 1   METGTQTQRSSGRGEDYEVQVSFHLSNDPHHIHEMGFVQLEEHSQVLSFLAPNNNNNTTN 60

Query: 61  MPPPPFTTTSPHSNILPRPPSWTNHQLPGTLDPKPGNDENCTATATDATNSWWRNTNADK 120
           MPPPPFTTTSPHSNILPRPPSWTNHQLPGTLDPKPGNDENCTATATDATNSWWRNTNADK
Sbjct: 61  MPPPPFTTTSPHSNILPRPPSWTNHQLPGTLDPKPGNDENCTATATDATNSWWRNTNADK 120

Query: 121 SKVKVRRKLREPRFCFQTRSDVDVLDDGYKWRKYGQKVVKNSLHPRSYYRCTHSNCRVKK 180
           SKVKVRRKLREPRFCFQTRSDVDVLDDGYKWRKYGQKVVKNSLHPRSYYRCTHSNCRVKK
Sbjct: 121 SKVKVRRKLREPRFCFQTRSDVDVLDDGYKWRKYGQKVVKNSLHPRSYYRCTHSNCRVKK 180

Query: 181 RVERLSEDCRMVITTYEGRHNHTPCDDSNSSEHEPFTSF 220
           RVERLSEDCRMVITTYEGRHNHTPCDDSNSSEHEPFTSF
Sbjct: 181 RVERLSEDCRMVITTYEGRHNHTPCDDSNSSEHEPFTSF 219

[Close]

BLAST of Cucsa.260060 vs. NCBI nr
Match: gi|659074721|ref|XP_008437760.1| (PREDICTED: probable WRKY transcription factor 12 [Cucumis melo])

HSP 1 Score: 466.8 bits (1200), Expect = 2.0e-128
Identity = 217/220 (98.64%), Postives = 218/220 (99.09%), Query Frame = 1


Query: 1   METGTQTQRSSGRGEDYEVQVSFHLSNDPHHIHEMGFVQLEEHSQVLSFLAP-NNNNNTT 60
           METGTQTQRSSGRGEDYEVQVSFHLSNDPHHIHEMGFVQLEEHSQVLSFLAP NNNNN T
Sbjct: 1   METGTQTQRSSGRGEDYEVQVSFHLSNDPHHIHEMGFVQLEEHSQVLSFLAPNNNNNNAT 60

Query: 61  NMPPPPFTTTSPHSNILPRPPSWTNHQLPGTLDPKPGNDENCTATATDATNSWWRNTNAD 120
           NMPPPPFTTTSPHSNILPRPPSWTNHQLPGTLDPKPGNDENCTATATDATNSWWRNTNAD
Sbjct: 61  NMPPPPFTTTSPHSNILPRPPSWTNHQLPGTLDPKPGNDENCTATATDATNSWWRNTNAD 120

Query: 121 KSKVKVRRKLREPRFCFQTRSDVDVLDDGYKWRKYGQKVVKNSLHPRSYYRCTHSNCRVK 180
           KSKVKVRRKLREPRFCFQTRSDVDVLDDGYKWRKYGQKVVKNSLHPRSYYRCTHSNCRVK
Sbjct: 121 KSKVKVRRKLREPRFCFQTRSDVDVLDDGYKWRKYGQKVVKNSLHPRSYYRCTHSNCRVK 180

Query: 181 KRVERLSEDCRMVITTYEGRHNHTPCDDSNSSEHEPFTSF 220
           KRVERLSEDCRMVITTYEGRHNH+PCDDSNSSEHEPFTSF
Sbjct: 181 KRVERLSEDCRMVITTYEGRHNHSPCDDSNSSEHEPFTSF 220

[Close]

BLAST of Cucsa.260060 vs. NCBI nr
Match: gi|225453346|ref|XP_002270527.1| (PREDICTED: probable WRKY transcription factor 12 [Vitis vinifera])

HSP 1 Score: 301.6 bits (771), Expect = 1.1e-78
Identity = 152/219 (69.41%), Postives = 174/219 (79.45%), Query Frame = 1


Query: 16  DYEVQVSFHLSNDPHHIHEMGFVQLEEHSQVLSFLAP----------NNNNNTTNMPPPP 75
           +YE+QVS+  S  P  IHEMGFVQ EE+ QVLSFLAP          N  + +T  P P 
Sbjct: 15  NYELQVSY--STTPQGIHEMGFVQFEEN-QVLSFLAPSQSAQMSQPLNTASTSTPTPTPT 74

Query: 76  FTTTSP-----HSNILPRPPSWTNHQLPGTLDPKPGNDENCTATATDATNSWWRNTNADK 135
            TTT+      H+++L RP SW N Q+ GTLDPK  N+ENCT  A D +NSWWR+++++K
Sbjct: 75  NTTTNTTMGFTHNDLLTRP-SWNNEQV-GTLDPKAVNEENCTGNANDGSNSWWRSSSSEK 134

Query: 136 SKVKVRRKLREPRFCFQTRSDVDVLDDGYKWRKYGQKVVKNSLHPRSYYRCTHSNCRVKK 195
           +KVK RRKLREPRFCFQTRS+VDVLDDGYKWRKYGQKVVKNSLHPRSYYRCTH+NCRVKK
Sbjct: 135 TKVKARRKLREPRFCFQTRSEVDVLDDGYKWRKYGQKVVKNSLHPRSYYRCTHTNCRVKK 194

Query: 196 RVERLSEDCRMVITTYEGRHNHTPCDDSNSSEHEPFTSF 220
           RVERLSEDCRMVITTYEGRHNH+PCDDSNSSEHE FTSF
Sbjct: 195 RVERLSEDCRMVITTYEGRHNHSPCDDSNSSEHECFTSF 228

[Close]

BLAST of Cucsa.260060 vs. NCBI nr
Match: gi|590724039|ref|XP_007052352.1| (WRKY family transcription factor [Theobroma cacao])

HSP 1 Score: 292.0 bits (746), Expect = 8.9e-76
Identity = 141/204 (69.12%), Postives = 163/204 (79.90%), Query Frame = 1


Query: 16  DYEVQVSFHLSNDPHHIHEMGFVQLEEHSQVLSFLAPNNNNNTTNMPPPPFTTTSPHSNI 75
           +YE+QVSF   + P  IHEMGFVQ EE+  V+SFLAP  +++  + P     + S  +N 
Sbjct: 9   NYELQVSF---STPQAIHEMGFVQFEENQAVMSFLAPAQSSHQISQPVNTAASISNSTNS 68

Query: 76  LPRPPSWTNHQLPGTLDPKPGNDENCTATATDATNSWWRNTNADKSKVKVRRKLREPRFC 135
                 ++++   GTLDPK  NDENC + A D  NSWWR++ ++KSKVKVRRKLREPRFC
Sbjct: 69  TAM--GFSHNDQVGTLDPKAVNDENCASNANDGNNSWWRSSASEKSKVKVRRKLREPRFC 128

Query: 136 FQTRSDVDVLDDGYKWRKYGQKVVKNSLHPRSYYRCTHSNCRVKKRVERLSEDCRMVITT 195
           FQTRSDVDVLDDGYKWRKYGQKVVKNSLHPRSYYRCTH+NCRVKKRVERLSEDCRMVITT
Sbjct: 129 FQTRSDVDVLDDGYKWRKYGQKVVKNSLHPRSYYRCTHNNCRVKKRVERLSEDCRMVITT 188

Query: 196 YEGRHNHTPCDDSNSSEHEPFTSF 220
           YEGRHNH+PCDDSNSSEHE FTSF
Sbjct: 189 YEGRHNHSPCDDSNSSEHECFTSF 207

[Close]

BLAST of Cucsa.260060 vs. NCBI nr
Match: gi|922331762|ref|XP_013443872.1| (WRKY family transcription factor [Medicago truncatula])

HSP 1 Score: 290.4 bits (742), Expect = 2.6e-75
Identity = 147/223 (65.92%), Postives = 167/223 (74.89%), Query Frame = 1


Query: 16  DYEVQVSFHLSNDPHHIHEMGFVQLEEHSQVLSFLAP-------------NNNNNTTNMP 75
           +Y++QVSF  +N P  IHEMGFVQ EE+ QVLSFL+P             N+   TTN  
Sbjct: 9   NYDLQVSF--TNTPQAIHEMGFVQFEEN-QVLSFLSPSTQSQPSQLSQSLNSGRGTTNAT 68

Query: 76  PPPFTTTSP------HSNILPRPPSWTNHQLPGTLDPKPGNDENCTATATDATNSWWRNT 135
                TT+       H++++     W N Q+  TLDPK  +DENCT   +D  N+WWR+ 
Sbjct: 69  TGAAVTTTTVAAGFSHNDLVTTRTPWNNEQVR-TLDPKAVSDENCTGNTSDGNNTWWRSG 128

Query: 136 NADKSKVKVRRKLREPRFCFQTRSDVDVLDDGYKWRKYGQKVVKNSLHPRSYYRCTHSNC 195
            A+KSKVKVRRKLREPRFCFQTRSDVDVLDDGYKWRKYGQKVVKNSLHPRSYYRCTH+NC
Sbjct: 129 GAEKSKVKVRRKLREPRFCFQTRSDVDVLDDGYKWRKYGQKVVKNSLHPRSYYRCTHNNC 188

Query: 196 RVKKRVERLSEDCRMVITTYEGRHNHTPCDDSNSSEHEPFTSF 220
           RVKKRVERLSEDCRMVITTYEGRHNH+PCDDSNSSEHE FTSF
Sbjct: 189 RVKKRVERLSEDCRMVITTYEGRHNHSPCDDSNSSEHECFTSF 227

The following BLAST results are available for this feature:

BLAST of Cucsa.260060 vs. Swiss-Prot


Match Name	E-value	Identity	Description
WRK12_ARATH	4.3e-54	58.33	Probable WRKY transcription factor 12 OS=Arabidopsis thaliana GN=WRKY12 PE=2 SV=...	[more]
WRK13_ARATH	5.3e-36	70.19	Probable WRKY transcription factor 13 OS=Arabidopsis thaliana GN=WRKY13 PE=2 SV=...	[more]
WRK48_ARATH	1.6e-29	40.31	Probable WRKY transcription factor 48 OS=Arabidopsis thaliana GN=WRKY48 PE=2 SV=...	[more]
WRK57_ARATH	2.1e-29	44.72	Probable WRKY transcription factor 57 OS=Arabidopsis thaliana GN=WRKY57 PE=2 SV=...	[more]
WRK56_ARATH	2.6e-27	40.46	Probable WRKY transcription factor 56 OS=Arabidopsis thaliana GN=WRKY56 PE=2 SV=...	[more]

BLAST of Cucsa.260060 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L3J0_CUCSA	5.2e-131	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G116700 PE=4 SV=1	[more]
A0A061DUM5_THECC	6.2e-76	69.12	WRKY family transcription factor OS=Theobroma cacao GN=TCM_005744 PE=4 SV=1	[more]
F8RKQ9_MEDTR	1.8e-75	65.92	STP OS=Medicago truncatula GN=MTR_8g007270 PE=2 SV=1	[more]
A0A0S3SVH6_PHAAN	2.4e-75	65.35	Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.09G016400 PE=...	[more]
M5XNS0_PRUPE	1.2e-74	64.10	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa022287mg PE=4 SV=1	[more]

BLAST of Cucsa.260060 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G44745.1	2.4e-55	58.33	WRKY family transcription factor	[more]
AT4G39410.1	3.0e-37	70.19	WRKY DNA-binding protein 13	[more]
AT5G49520.1	9.3e-31	40.31	WRKY DNA-binding protein 48	[more]
AT1G69310.1	1.2e-30	44.72	WRKY DNA-binding protein 57	[more]
AT1G64000.1	1.5e-28	40.46	WRKY DNA-binding protein 56	[more]

BLAST of Cucsa.260060 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449431940\|ref\|XP_004133758.1\|	7.4e-131	100.00	PREDICTED: probable WRKY transcription factor 12 [Cucumis sativus]	[more]
gi\|659074721\|ref\|XP_008437760.1\|	2.0e-128	98.64	PREDICTED: probable WRKY transcription factor 12 [Cucumis melo]	[more]
gi\|225453346\|ref\|XP_002270527.1\|	1.1e-78	69.41	PREDICTED: probable WRKY transcription factor 12 [Vitis vinifera]	[more]
gi\|590724039\|ref\|XP_007052352.1\|	8.9e-76	69.12	WRKY family transcription factor [Theobroma cacao]	[more]
gi\|922331762\|ref\|XP_013443872.1\|	2.6e-75	65.92	WRKY family transcription factor [Medicago truncatula]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR003657	WRKY_dom

Vocabulary: **Molecular Function**
Term	Definition
GO:0003700	transcription factor activity, sequence-specific DNA binding
GO:0043565	sequence-specific DNA binding

Vocabulary: **Biological Process**
Term	Definition
GO:0006355	regulation of transcription, DNA-templated

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005667	transcription factor complex
molecular_function	GO:0043565	sequence-specific DNA binding
molecular_function	GO:0003700	transcription factor activity, sequence-specific DNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsa.260060.1	Cucsa.260060.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003657	WRKY domain	GENE3D	G3DSA:2.20.25.80		coord: 130..203 score: 6.7
IPR003657	WRKY domain	PFAM	PF03106	WRKY	coord: 146..202 score: 3.1
IPR003657	WRKY domain	SMART	SM00774	WRKY_cls	coord: 145..204 score: 1.2
IPR003657	WRKY domain	PROFILE	PS50811	WRKY	coord: 140..202 score: 29
IPR003657	WRKY domain	unknown	SSF118290	WRKY DNA-binding domain	coord: 137..203 score: 1.7
None	No IPR available	PANTHER	PTHR31221	FAMILY NOT NAMED	coord: 20..211 score: 2.0

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cucsa.260060	Cla021067	Watermelon (97103) v1	cgywmB479
Cucsa.260060	Csa3G116700	Cucumber (Chinese Long) v2	cgycuB366
Cucsa.260060	MELO3C005937	Melon (DHL92) v3.5.1	cgymeB439
Cucsa.260060	CSPI03G07040	Wild cucumber (PI 183967)	cgycpiB383
Cucsa.260060	Lsi05G022330	Bottle gourd (USVL1VR-Ls)	cgylsiB415
Cucsa.260060	Cp4.1LG08g00210	Cucurbita pepo (Zucchini)	cgycpeB0687
Cucsa.260060	MELO3C005937.2	Melon (DHL92) v3.6.1	cgymedB432
Cucsa.260060	CsaV3_3G007160	Cucumber (Chinese Long) v3	cgycucB387
Cucsa.260060	Cla97C05G080000	Watermelon (97103) v2	cgywmbB452
Cucsa.260060	Bhi01G000457	Wax gourd	cgywgoB514
Cucsa.260060	Carg25067	Silver-seed gourd	carcgyB1129

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cucsa.260060	Bottle gourd (USVL1VR-Ls)	cgylsiB421
Cucsa.260060	Cucurbita maxima (Rimu)	cgycmaB0707
Cucsa.260060	Cucurbita maxima (Rimu)	cgycmaB0728
Cucsa.260060	Cucurbita moschata (Rifu)	cgycmoB0718
Cucsa.260060	Watermelon (Charleston Gray)	cgywcgB451