CsGy3G007180 (gene) Cucumber (Gy14) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsGy3G007180
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v2)
Description	probable WRKY transcription factor 12
Location	Chr3 : 6277681 .. 6279618 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAACTGGAACCCAGACCCAAAGATCATCAGGGAGAGGGGAGGATTATGAAGTTCAAGTGTCGTTCCACCTCTCAAATGATCCACACCACATCCACGAAATGGGATTTGTGCAGTTGGAAGAGCACAGCCAGGTTTTGAGCTTCTTGGCACCCAACAACAACAACAACACCACCAATATGCCACCTCCTCCCTTTACTACTACTTCTCCTCACTCCAACATCCTCCCTCGACCACCTTCTTGGACTAATCACCAGGTACTAACTACACTAACTACTAACTACTATTACTATTAATTTGCTCACCTTTTTTCTACTCGATTAATATACATGTATTAAGTTGTCATCCACTAATTCCTATCAGCTGCCCGGAACACTGGATCCCAAGCCCGGTAACGATGAAAACTGCACGGCTACTGCTACTGATGCCACCAATTCATGGTATACACAAATACAACAAAACCCTAATTATTACATATTGTTTGCACGTACAGTGATTGAGTTAGGTAGGAATGAATTAATATGAATATATACATGATCATGCTCTTAATTTGCACTGCAGGTGGAGAAACACAAACGCCGATAAGAGTAAGGTGAAGGTAAGGAGAAAGCTGAGAGAGCCACGTTTCTGTTTTCAGACAAGAAGCGATGTTGATGTGCTGGACGATGGCTATAAATGGAGAAAATATGGCCAAAAAGTTGTCAAGAACAGCCTTCATCCTAGGTACTACCCATCCTTACCTCCTTTTCCGATCCTCCTCCTCCTCCTCTTCTTCTTCTTTCTTTTAGTATATATCACATCCTTCTCTCGCATCGCATGCACCAGTAATGCCACCCAAACCCTTATGTTCTTTGCTAATATAACATCCACCATTCACTTTTCAATTATATCATCACTTCTCTCCCAATATCCCTACCCTAATTTTGAATTTAATTTATCTATACTACTTTAGCTTCTTCATGATGGCATATTAATTTCATGCATCATCAAGTCTCCTTGCTATTTTGATATCGAAATGAGATTAATTATTTTTTTTTATCTAGATTCACGAGTGTAGAATAGAACTAATTATTATTTTTATCTAGATTCAAGAGTGTAGAATAGAACCGATTAAAGTTGTATGAAATGTTGGGAGAGATTGATTAGTTATGATGCAAATTAAGGCATACGGATTATTGTCATAAGTTGCATTGCATTGTATGTGTGTATGTATGTATATATGTATAGCATATATGTATTATCACGAGTTGTTGATGATGCGCGAGAGAGAGAGGTTAAAATGAGAAAATGCACGAATGGAATGATAAAACAATTGATTAGTTAGTATAGAAAATAGATATACATATACATGTACATGTACATGTATGTAAAGAGAGAGGATATAATAATTAGGAGAAAGAGAAGTGAAGAGGGGTTTTGGGGGTTTGGGTAGTTCACAGTTCAGTTTCAGTAGTAGGCAGATTGGGAATGATTATGTTATATTCTCTTCACCAGTGCCATCATTATTGATTTGGGGATTTTGGTTATAGGTGGCCGCCCCCCCAAGGCCAAGGCCCAGAACAACTACCAGTCATCCACACACACACACACACACATATATACCTATATTCTTCTATTTCTAATTTTGACTACTTTTTCTTTACTCTCTGCACAACACAACAACATATCCATTCATTTCATTTTTGTTTCTATGGTGATTTAATATGCGAAGGTAGGATGAGAACAAATAATAATATTCAAGGGTTAAATAATGATAGTGATTAATAATTTGCAGAAGCTACTATCGTTGCACGCATAGCAACTGCCGAGTGAAGAAGAGGGTAGAGCGACTGTCGGAGGATTGCCGGATGGTAATAACCACTTACGAAGGTAGACACAACCACACTCCTTGTGATGACTCCAATTCTTCGGAGCACGAACCCTTTACATCCTTCTGA

mRNA sequence

ATGGAAACTGGAACCCAGACCCAAAGATCATCAGGGAGAGGGGAGGATTATGAAGTTCAAGTGTCGTTCCACCTCTCAAATGATCCACACCACATCCACGAAATGGGATTTGTGCAGTTGGAAGAGCACAGCCAGGTTTTGAGCTTCTTGGCACCCAACAACAACAACAACACCACCAATATGCCACCTCCTCCCTTTACTACTACTTCTCCTCACTCCAACATCCTCCCTCGACCACCTTCTTGGACTAATCACCAGTTGTCATCCACTAATTCCTATCAGCTGCCCGGAACACTGGATCCCAAGCCCGGTAACGATGAAAACTGCACGGCTACTGCTACTGATGCCACCAATTCATGGTGGAGAAACACAAACGCCGATAAGAGTAAGGTGAAGACAAGAAGCGATGTTGATGTGCTGGACGATGGCTATAAATGGAGAAAATATGGCCAAAAAGTTGTCAAGAACAGCCTTCATCCTAGTGCCATCATTATTGATTTGGGGATTTTGGTTATAGGTGGCCGCCCCCCCAAGGCCAAGGCCCAGAACAACTACCAAAGCTACTATCGTTGCACGCATAGCAACTGCCGAGTGAAGAAGAGGGTAGAGCGACTGTCGGAGGATTGCCGGATGGTAATAACCACTTACGAAGGTAGACACAACCACACTCCTTGTGATGACTCCAATTCTTCGGAGCACGAACCCTTTACATCCTTCTGA

Coding sequence (CDS)

ATGGAAACTGGAACCCAGACCCAAAGATCATCAGGGAGAGGGGAGGATTATGAAGTTCAAGTGTCGTTCCACCTCTCAAATGATCCACACCACATCCACGAAATGGGATTTGTGCAGTTGGAAGAGCACAGCCAGGTTTTGAGCTTCTTGGCACCCAACAACAACAACAACACCACCAATATGCCACCTCCTCCCTTTACTACTACTTCTCCTCACTCCAACATCCTCCCTCGACCACCTTCTTGGACTAATCACCAGTTGTCATCCACTAATTCCTATCAGCTGCCCGGAACACTGGATCCCAAGCCCGGTAACGATGAAAACTGCACGGCTACTGCTACTGATGCCACCAATTCATGGTGGAGAAACACAAACGCCGATAAGAGTAAGGTGAAGACAAGAAGCGATGTTGATGTGCTGGACGATGGCTATAAATGGAGAAAATATGGCCAAAAAGTTGTCAAGAACAGCCTTCATCCTAGTGCCATCATTATTGATTTGGGGATTTTGGTTATAGGTGGCCGCCCCCCCAAGGCCAAGGCCCAGAACAACTACCAAAGCTACTATCGTTGCACGCATAGCAACTGCCGAGTGAAGAAGAGGGTAGAGCGACTGTCGGAGGATTGCCGGATGGTAATAACCACTTACGAAGGTAGACACAACCACACTCCTTGTGATGACTCCAATTCTTCGGAGCACGAACCCTTTACATCCTTCTGA

Protein sequence

METGTQTQRSSGRGEDYEVQVSFHLSNDPHHIHEMGFVQLEEHSQVLSFLAPNNNNNTTNMPPPPFTTTSPHSNILPRPPSWTNHQLSSTNSYQLPGTLDPKPGNDENCTATATDATNSWWRNTNADKSKVKTRSDVDVLDDGYKWRKYGQKVVKNSLHPSAIIIDLGILVIGGRPPKAKAQNNYQSYYRCTHSNCRVKKRVERLSEDCRMVITTYEGRHNHTPCDDSNSSEHEPFTSF

Homology

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BLAST of CsGy3G007180 vs. NCBI nr
Match: XP_004133758.1 (PREDICTED: probable WRKY transcription factor 12 [Cucumis sativus] >KGN56333.1 hypothetical protein Csa_3G116700 [Cucumis sativus])

HSP 1 Score: 358.2 bits (918), Expect = 2.1e-95
Identity = 205/252 (81.35%), Postives = 206/252 (81.75%), Query Frame = 0


Query: 1   METGTQTQRSSGRGEDYEVQVSFHLSNDPHHIHEMGFVQLEEHSQVLSFLAPXXXXXXXX 60
           METGTQTQRSSGRGEDYEVQVSFHLSNDPHHIHEMGFVQLEEHSQVLSFLAPXXXXXXXX
Sbjct: 1   METGTQTQRSSGRGEDYEVQVSFHLSNDPHHIHEMGFVQLEEHSQVLSFLAPXXXXXXXX 60

Query: 61  XXXXXXXXXXXHSNILPRPPSWTNHQLSSTNSYQLPGTLDPKPGNDENCTATATDATNSW 120
           XXXXXXXXXXXHSNILPRPPSWTNH        QLPGTLDPKPGNDENCTATATDATNSW
Sbjct: 61  XXXXXXXXXXXHSNILPRPPSWTNH--------QLPGTLDPKPGNDENCTATATDATNSW 120

Query: 121 WRNTNADKSKVK-------------TRSDVDVLDDGYKWRKYGQKVVKNSLHPSAIIIDL 180
           WRNTNADKSKVK             TRSDVDVLDDGYKWRKYGQKVVKNSLHP       
Sbjct: 121 WRNTNADKSKVKVRRKLREPRFCFQTRSDVDVLDDGYKWRKYGQKVVKNSLHP------- 180

Query: 181 GILVIGGRPPKAKAQNNYQSYYRCTHSNCRVKKRVERLSEDCRMVITTYEGRHNHTPCDD 240
                             +SYYRCTHSNCRVKKRVERLSEDCRMVITTYEGRHNHTPCDD
Sbjct: 181 ------------------RSYYRCTHSNCRVKKRVERLSEDCRMVITTYEGRHNHTPCDD 219

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BLAST of CsGy3G007180 vs. NCBI nr
Match: XP_008437760.1 (PREDICTED: probable WRKY transcription factor 12 [Cucumis melo])

HSP 1 Score: 352.1 bits (902), Expect = 1.5e-93
Identity = 204/253 (80.63%), Postives = 206/253 (81.42%), Query Frame = 0


Query: 1   METGTQTQRSSGRGEDYEVQVSFHLSNDPHHIHEMGFVQLEEHSQVLSFLAP-XXXXXXX 60
           METGTQTQRSSGRGEDYEVQVSFHLSNDPHHIHEMGFVQLEEHSQVLSFLAP XXXXXXX
Sbjct: 1   METGTQTQRSSGRGEDYEVQVSFHLSNDPHHIHEMGFVQLEEHSQVLSFLAPXXXXXXXX 60

Query: 61  XXXXXXXXXXXXHSNILPRPPSWTNHQLSSTNSYQLPGTLDPKPGNDENCTATATDATNS 120
           XXXXXXXXXXXXHSNILPRPPSWTNH        QLPGTLDPKPGNDENCTATATDATNS
Sbjct: 61  XXXXXXXXXXXXHSNILPRPPSWTNH--------QLPGTLDPKPGNDENCTATATDATNS 120

Query: 121 WWRNTNADKSKVK-------------TRSDVDVLDDGYKWRKYGQKVVKNSLHPSAIIID 180
           WWRNTNADKSKVK             TRSDVDVLDDGYKWRKYGQKVVKNSLHP      
Sbjct: 121 WWRNTNADKSKVKVRRKLREPRFCFQTRSDVDVLDDGYKWRKYGQKVVKNSLHP------ 180

Query: 181 LGILVIGGRPPKAKAQNNYQSYYRCTHSNCRVKKRVERLSEDCRMVITTYEGRHNHTPCD 240
                              +SYYRCTHSNCRVKKRVERLSEDCRMVITTYEGRHNH+PCD
Sbjct: 181 -------------------RSYYRCTHSNCRVKKRVERLSEDCRMVITTYEGRHNHSPCD 220

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BLAST of CsGy3G007180 vs. NCBI nr
Match: XP_022924619.1 (probable WRKY transcription factor 12 [Cucurbita moschata])

HSP 1 Score: 260.0 bits (663), Expect = 7.9e-66
Identity = 146/255 (57.25%), Postives = 166/255 (65.10%), Query Frame = 0


Query: 1   METGTQTQRSSGRGEDYEVQVSFHLSND---PHHIHEMGFVQLEEHSQVLSFLAPXXXXX 60
           METG+Q    SG    Y++Q+SFHLSN    P  IH+MGFV  ++H+QVLSFL+P     
Sbjct: 1   METGSQI---SGL-PSYQLQLSFHLSNAPPLPQPIHQMGFVHFQDHTQVLSFLSP---NT 60

Query: 61  XXXXXXXXXXXXXXHSNILPRPPSWTNHQLSSTNSYQLPGTLDPKPGNDENCTATATDAT 120
                         H++++ R PSW+N Q+         GT DPKPGNDENC  +A+D +
Sbjct: 61  AATATMPPAFTTSAHAHLVSR-PSWSNEQV---------GTQDPKPGNDENCNGSASDGS 120

Query: 121 NSWWRNTNADKSKVK-------------TRSDVDVLDDGYKWRKYGQKVVKNSLHPSAII 180
           NSWWRNTNADKSKVK             TRSDVDVLDDGYKWRKYGQKVVKNSLHP    
Sbjct: 121 NSWWRNTNADKSKVKVRRKLREPRFCFQTRSDVDVLDDGYKWRKYGQKVVKNSLHP---- 180

Query: 181 IDLGILVIGGRPPKAKAQNNYQSYYRCTHSNCRVKKRVERLSEDCRMVITTYEGRHNHTP 240
                                +SYYRCTHSNCRVKKRVERLSEDCRMVITTYEGRHNH+P
Sbjct: 181 ---------------------RSYYRCTHSNCRVKKRVERLSEDCRMVITTYEGRHNHSP 213

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BLAST of CsGy3G007180 vs. NCBI nr
Match: XP_022979595.1 (probable WRKY transcription factor 12 [Cucurbita maxima])

HSP 1 Score: 258.5 bits (659), Expect = 2.3e-65
Identity = 145/255 (56.86%), Postives = 166/255 (65.10%), Query Frame = 0


Query: 1   METGTQTQRSSGRGEDYEVQVSFHLSND---PHHIHEMGFVQLEEHSQVLSFLAPXXXXX 60
           METG+Q    SG    Y++Q+SFHLSN    P  IH+MGFV  ++H+QVLSFL+P     
Sbjct: 1   METGSQI---SGL-PSYQLQLSFHLSNAPPLPQPIHQMGFVHFQDHTQVLSFLSP---NS 60

Query: 61  XXXXXXXXXXXXXXHSNILPRPPSWTNHQLSSTNSYQLPGTLDPKPGNDENCTATATDAT 120
                         H++++ R PSW+N Q+         GT DPKPGNDENC  +A+D +
Sbjct: 61  AATATMPPAFTTSAHAHLISR-PSWSNEQV---------GTQDPKPGNDENCNGSASDGS 120

Query: 121 NSWWRNTNADKSKVK-------------TRSDVDVLDDGYKWRKYGQKVVKNSLHPSAII 180
           NSWWR+TNADKSKVK             TRSDVDVLDDGYKWRKYGQKVVKNSLHP    
Sbjct: 121 NSWWRSTNADKSKVKVRRKLREPRFCFQTRSDVDVLDDGYKWRKYGQKVVKNSLHP---- 180

Query: 181 IDLGILVIGGRPPKAKAQNNYQSYYRCTHSNCRVKKRVERLSEDCRMVITTYEGRHNHTP 240
                                +SYYRCTHSNCRVKKRVERLSEDCRMVITTYEGRHNH+P
Sbjct: 181 ---------------------RSYYRCTHSNCRVKKRVERLSEDCRMVITTYEGRHNHSP 213

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BLAST of CsGy3G007180 vs. NCBI nr
Match: XP_023527795.1 (probable WRKY transcription factor 12 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 258.5 bits (659), Expect = 2.3e-65
Identity = 145/255 (56.86%), Postives = 165/255 (64.71%), Query Frame = 0


Query: 1   METGTQTQRSSGRGEDYEVQVSFHLSND---PHHIHEMGFVQLEEHSQVLSFLAPXXXXX 60
           METG+Q    SG    Y++Q+SFHLSN    P  IH+MGFV  ++H+QVLSFL+P     
Sbjct: 1   METGSQI---SGL-PSYQLQLSFHLSNAPPLPQPIHQMGFVHFQDHTQVLSFLSP---NT 60

Query: 61  XXXXXXXXXXXXXXHSNILPRPPSWTNHQLSSTNSYQLPGTLDPKPGNDENCTATATDAT 120
                         H++++ R PSW+N Q+         GT DPKPGNDENC  +A+D  
Sbjct: 61  AATATMPPAFTTSAHAHLVSR-PSWSNEQV---------GTQDPKPGNDENCNGSASDGN 120

Query: 121 NSWWRNTNADKSKVK-------------TRSDVDVLDDGYKWRKYGQKVVKNSLHPSAII 180
           NSWWRNTNADKSKVK             TRSDVDVLDDGYKWRKYGQKVVKNSLHP    
Sbjct: 121 NSWWRNTNADKSKVKVRRKLREPRFCFQTRSDVDVLDDGYKWRKYGQKVVKNSLHP---- 180

Query: 181 IDLGILVIGGRPPKAKAQNNYQSYYRCTHSNCRVKKRVERLSEDCRMVITTYEGRHNHTP 240
                                +SYYRCTH+NCRVKKRVERLSEDCRMVITTYEGRHNH+P
Sbjct: 181 ---------------------RSYYRCTHNNCRVKKRVERLSEDCRMVITTYEGRHNHSP 213

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BLAST of CsGy3G007180 vs. TAIR10
Match: AT2G44745.1 (WRKY family transcription factor)

HSP 1 Score: 142.1 bits (357), Expect = 4.4e-34
Identity = 70/108 (64.81%), Postives = 77/108 (71.30%), Query Frame = 0


Query: 132 KTRSDVDVLDDGYKWRKYGQKVVKNSLHPSAIIIDLGILVIGGRPPKAKAQNNYQSYYRC 191
           +T+SDVDVLDDGYKWRKYGQKVVKNSLHP                         +SYYRC
Sbjct: 136 QTKSDVDVLDDGYKWRKYGQKVVKNSLHP-------------------------RSYYRC 195

Query: 192 THSNCRVKKRVERLSEDCRMVITTYEGRHNHTPCDDSNSSEHEPFTSF 240
           TH+NCRVKKRVERLSEDCRMVITTYEGRHNH P DDS S +H+  +SF
Sbjct: 196 THNNCRVKKRVERLSEDCRMVITTYEGRHNHIPSDDSTSPDHDCLSSF 218

[Close]

BLAST of CsGy3G007180 vs. TAIR10
Match: AT4G39410.1 (WRKY DNA-binding protein 13)

HSP 1 Score: 110.2 bits (274), Expect = 1.8e-24
Identity = 61/114 (53.51%), Postives = 71/114 (62.28%), Query Frame = 0


Query: 132 KTRSDVDVLDDGYKWRKYGQKVVKNSLHPSAIIIDLGILVIGGRPPKAKAQNNYQSYYRC 191
           KT S+VDVLDDGY+WRKYGQKVVKN+ HP                         +SYYRC
Sbjct: 214 KTLSEVDVLDDGYRWRKYGQKVVKNTQHP-------------------------RSYYRC 273

Query: 192 THSNCRVKKRVERLSEDCRMVITTYEGRHNHTPC----DDSNSSE--HEPFTSF 240
           T   CRVKKRVERL++D RMVITTYEGRH H+P     DDS S+   H P ++F
Sbjct: 274 TQDKCRVKKRVERLADDPRMVITTYEGRHLHSPSNHLDDDSLSTSHLHPPLSNF 302

[Close]

BLAST of CsGy3G007180 vs. TAIR10
Match: AT1G64000.1 (WRKY DNA-binding protein 56)

HSP 1 Score: 96.3 bits (238), Expect = 2.7e-20
Identity = 48/94 (51.06%), Postives = 59/94 (62.77%), Query Frame = 0


Query: 133 TRSDVDVLDDGYKWRKYGQKVVKNSLHPSAIIIDLGILVIGGRPPKAKAQNNYQSYYRCT 192
           TRSD DVLDDGY+WRKYGQK VKN+ HP                         +SYYRCT
Sbjct: 106 TRSDDDVLDDGYRWRKYGQKSVKNNAHP-------------------------RSYYRCT 165

Query: 193 HSNCRVKKRVERLSEDCRMVITTYEGRHNHTPCD 227
           +  C VKK+V+RL++D  +V+TTYEG HNH PC+
Sbjct: 166 YHTCNVKKQVQRLAKDPNVVVTTYEGVHNH-PCE 173

[Close]

BLAST of CsGy3G007180 vs. TAIR10
Match: AT3G01080.1 (WRKY DNA-binding protein 58)

HSP 1 Score: 95.9 bits (237), Expect = 3.6e-20
Identity = 49/108 (45.37%), Postives = 62/108 (57.41%), Query Frame = 0


Query: 115 DATNSWWRNTNADKSKVKTRSDVDVLDDGYKWRKYGQKVVKNSLHPSAIIIDLGILVIGG 174
           D  ++  R     K  V+T+S+VD+LDDGY+WRKYGQKVVK + HP              
Sbjct: 280 DGVSTTHRTVTEPKIIVQTKSEVDLLDDGYRWRKYGQKVVKGNPHP-------------- 339

Query: 175 RPPKAKAQNNYQSYYRCTHSNCRVKKRVERLSEDCRMVITTYEGRHNH 223
                      +SYY+CT  NC V+K VER S D + VITTYEG+HNH
Sbjct: 340 -----------RSYYKCTTPNCTVRKHVERASTDAKAVITTYEGKHNH 362

[Close]

BLAST of CsGy3G007180 vs. TAIR10
Match: AT2G46130.1 (WRKY DNA-binding protein 43)

HSP 1 Score: 94.0 bits (232), Expect = 1.4e-19
Identity = 47/96 (48.96%), Postives = 60/96 (62.50%), Query Frame = 0


Query: 132 KTRSDVDVLDDGYKWRKYGQKVVKNSLHPSAIIIDLGILVIGGRPPKAKAQNNYQSYYRC 191
           +T+SD D+LDDGY+WRKYGQK VKNSL+P                         +SYYRC
Sbjct: 21  RTKSDADILDDGYRWRKYGQKSVKNSLYP-------------------------RSYYRC 80

Query: 192 THSNCRVKKRVERLSEDCRMVITTYEGRHNHTPCDD 228
           T   C VKK+V+RLS++  +V TTYEG HNH PC++
Sbjct: 81  TQHMCNVKKQVQRLSKETSIVETTYEGIHNH-PCEE 90

[Close]

BLAST of CsGy3G007180 vs. Swiss-Prot
Match: sp|Q93WY4|WRK12_ARATH (Probable WRKY transcription factor 12 OS=Arabidopsis thaliana OX=3702 GN=WRKY12 PE=2 SV=1)

HSP 1 Score: 142.1 bits (357), Expect = 7.9e-33
Identity = 70/108 (64.81%), Postives = 77/108 (71.30%), Query Frame = 0


Query: 132 KTRSDVDVLDDGYKWRKYGQKVVKNSLHPSAIIIDLGILVIGGRPPKAKAQNNYQSYYRC 191
           +T+SDVDVLDDGYKWRKYGQKVVKNSLHP                         +SYYRC
Sbjct: 136 QTKSDVDVLDDGYKWRKYGQKVVKNSLHP-------------------------RSYYRC 195

Query: 192 THSNCRVKKRVERLSEDCRMVITTYEGRHNHTPCDDSNSSEHEPFTSF 240
           TH+NCRVKKRVERLSEDCRMVITTYEGRHNH P DDS S +H+  +SF
Sbjct: 196 THNNCRVKKRVERLSEDCRMVITTYEGRHNHIPSDDSTSPDHDCLSSF 218

[Close]

BLAST of CsGy3G007180 vs. Swiss-Prot
Match: sp|Q9SVB7|WRK13_ARATH (Probable WRKY transcription factor 13 OS=Arabidopsis thaliana OX=3702 GN=WRKY13 PE=2 SV=1)

HSP 1 Score: 110.2 bits (274), Expect = 3.3e-23
Identity = 61/114 (53.51%), Postives = 71/114 (62.28%), Query Frame = 0


Query: 132 KTRSDVDVLDDGYKWRKYGQKVVKNSLHPSAIIIDLGILVIGGRPPKAKAQNNYQSYYRC 191
           KT S+VDVLDDGY+WRKYGQKVVKN+ HP                         +SYYRC
Sbjct: 214 KTLSEVDVLDDGYRWRKYGQKVVKNTQHP-------------------------RSYYRC 273

Query: 192 THSNCRVKKRVERLSEDCRMVITTYEGRHNHTPC----DDSNSSE--HEPFTSF 240
           T   CRVKKRVERL++D RMVITTYEGRH H+P     DDS S+   H P ++F
Sbjct: 274 TQDKCRVKKRVERLADDPRMVITTYEGRHLHSPSNHLDDDSLSTSHLHPPLSNF 302

[Close]

BLAST of CsGy3G007180 vs. Swiss-Prot
Match: sp|Q8VWQ4|WRK56_ARATH (Probable WRKY transcription factor 56 OS=Arabidopsis thaliana OX=3702 GN=WRKY56 PE=2 SV=1)

HSP 1 Score: 96.3 bits (238), Expect = 5.0e-19
Identity = 48/94 (51.06%), Postives = 59/94 (62.77%), Query Frame = 0


Query: 133 TRSDVDVLDDGYKWRKYGQKVVKNSLHPSAIIIDLGILVIGGRPPKAKAQNNYQSYYRCT 192
           TRSD DVLDDGY+WRKYGQK VKN+ HP                         +SYYRCT
Sbjct: 106 TRSDDDVLDDGYRWRKYGQKSVKNNAHP-------------------------RSYYRCT 165

Query: 193 HSNCRVKKRVERLSEDCRMVITTYEGRHNHTPCD 227
           +  C VKK+V+RL++D  +V+TTYEG HNH PC+
Sbjct: 166 YHTCNVKKQVQRLAKDPNVVVTTYEGVHNH-PCE 173

[Close]

BLAST of CsGy3G007180 vs. Swiss-Prot
Match: sp|Q93WU7|WRK58_ARATH (Probable WRKY transcription factor 58 OS=Arabidopsis thaliana OX=3702 GN=WRKY58 PE=2 SV=2)

HSP 1 Score: 95.9 bits (237), Expect = 6.5e-19
Identity = 49/108 (45.37%), Postives = 62/108 (57.41%), Query Frame = 0


Query: 115 DATNSWWRNTNADKSKVKTRSDVDVLDDGYKWRKYGQKVVKNSLHPSAIIIDLGILVIGG 174
           D  ++  R     K  V+T+S+VD+LDDGY+WRKYGQKVVK + HP              
Sbjct: 280 DGVSTTHRTVTEPKIIVQTKSEVDLLDDGYRWRKYGQKVVKGNPHP-------------- 339

Query: 175 RPPKAKAQNNYQSYYRCTHSNCRVKKRVERLSEDCRMVITTYEGRHNH 223
                      +SYY+CT  NC V+K VER S D + VITTYEG+HNH
Sbjct: 340 -----------RSYYKCTTPNCTVRKHVERASTDAKAVITTYEGKHNH 362

[Close]

BLAST of CsGy3G007180 vs. Swiss-Prot
Match: sp|Q8GY11|WRK43_ARATH (Probable WRKY transcription factor 43 OS=Arabidopsis thaliana OX=3702 GN=WRKY43 PE=1 SV=1)

HSP 1 Score: 94.0 bits (232), Expect = 2.5e-18
Identity = 47/96 (48.96%), Postives = 60/96 (62.50%), Query Frame = 0


Query: 132 KTRSDVDVLDDGYKWRKYGQKVVKNSLHPSAIIIDLGILVIGGRPPKAKAQNNYQSYYRC 191
           +T+SD D+LDDGY+WRKYGQK VKNSL+P                         +SYYRC
Sbjct: 21  RTKSDADILDDGYRWRKYGQKSVKNSLYP-------------------------RSYYRC 80

Query: 192 THSNCRVKKRVERLSEDCRMVITTYEGRHNHTPCDD 228
           T   C VKK+V+RLS++  +V TTYEG HNH PC++
Sbjct: 81  TQHMCNVKKQVQRLSKETSIVETTYEGIHNH-PCEE 90

[Close]

BLAST of CsGy3G007180 vs. TrEMBL
Match: tr|A0A0A0L3J0|A0A0A0L3J0_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G116700 PE=4 SV=1)

HSP 1 Score: 358.2 bits (918), Expect = 1.4e-95
Identity = 205/252 (81.35%), Postives = 206/252 (81.75%), Query Frame = 0


Query: 1   METGTQTQRSSGRGEDYEVQVSFHLSNDPHHIHEMGFVQLEEHSQVLSFLAPXXXXXXXX 60
           METGTQTQRSSGRGEDYEVQVSFHLSNDPHHIHEMGFVQLEEHSQVLSFLAPXXXXXXXX
Sbjct: 1   METGTQTQRSSGRGEDYEVQVSFHLSNDPHHIHEMGFVQLEEHSQVLSFLAPXXXXXXXX 60

Query: 61  XXXXXXXXXXXHSNILPRPPSWTNHQLSSTNSYQLPGTLDPKPGNDENCTATATDATNSW 120
           XXXXXXXXXXXHSNILPRPPSWTNH        QLPGTLDPKPGNDENCTATATDATNSW
Sbjct: 61  XXXXXXXXXXXHSNILPRPPSWTNH--------QLPGTLDPKPGNDENCTATATDATNSW 120

Query: 121 WRNTNADKSKVK-------------TRSDVDVLDDGYKWRKYGQKVVKNSLHPSAIIIDL 180
           WRNTNADKSKVK             TRSDVDVLDDGYKWRKYGQKVVKNSLHP       
Sbjct: 121 WRNTNADKSKVKVRRKLREPRFCFQTRSDVDVLDDGYKWRKYGQKVVKNSLHP------- 180

Query: 181 GILVIGGRPPKAKAQNNYQSYYRCTHSNCRVKKRVERLSEDCRMVITTYEGRHNHTPCDD 240
                             +SYYRCTHSNCRVKKRVERLSEDCRMVITTYEGRHNHTPCDD
Sbjct: 181 ------------------RSYYRCTHSNCRVKKRVERLSEDCRMVITTYEGRHNHTPCDD 219

[Close]

BLAST of CsGy3G007180 vs. TrEMBL
Match: tr|A0A1S3AVD7|A0A1S3AVD7_CUCME (probable WRKY transcription factor 12 OS=Cucumis melo OX=3656 GN=LOC103483097 PE=4 SV=1)

HSP 1 Score: 352.1 bits (902), Expect = 1.0e-93
Identity = 204/253 (80.63%), Postives = 206/253 (81.42%), Query Frame = 0


Query: 1   METGTQTQRSSGRGEDYEVQVSFHLSNDPHHIHEMGFVQLEEHSQVLSFLAP-XXXXXXX 60
           METGTQTQRSSGRGEDYEVQVSFHLSNDPHHIHEMGFVQLEEHSQVLSFLAP XXXXXXX
Sbjct: 1   METGTQTQRSSGRGEDYEVQVSFHLSNDPHHIHEMGFVQLEEHSQVLSFLAPXXXXXXXX 60

Query: 61  XXXXXXXXXXXXHSNILPRPPSWTNHQLSSTNSYQLPGTLDPKPGNDENCTATATDATNS 120
           XXXXXXXXXXXXHSNILPRPPSWTNH        QLPGTLDPKPGNDENCTATATDATNS
Sbjct: 61  XXXXXXXXXXXXHSNILPRPPSWTNH--------QLPGTLDPKPGNDENCTATATDATNS 120

Query: 121 WWRNTNADKSKVK-------------TRSDVDVLDDGYKWRKYGQKVVKNSLHPSAIIID 180
           WWRNTNADKSKVK             TRSDVDVLDDGYKWRKYGQKVVKNSLHP      
Sbjct: 121 WWRNTNADKSKVKVRRKLREPRFCFQTRSDVDVLDDGYKWRKYGQKVVKNSLHP------ 180

Query: 181 LGILVIGGRPPKAKAQNNYQSYYRCTHSNCRVKKRVERLSEDCRMVITTYEGRHNHTPCD 240
                              +SYYRCTHSNCRVKKRVERLSEDCRMVITTYEGRHNH+PCD
Sbjct: 181 -------------------RSYYRCTHSNCRVKKRVERLSEDCRMVITTYEGRHNHSPCD 220

[Close]

BLAST of CsGy3G007180 vs. TrEMBL
Match: tr|A0A1U6ZIF2|A0A1U6ZIF2_9ROSI (probable WRKY transcription factor 12 OS=Juglans regia OX=51240 GN=WRKY12 PE=2 SV=1)

HSP 1 Score: 226.1 bits (575), Expect = 8.4e-56
Identity = 146/259 (56.37%), Postives = 163/259 (62.93%), Query Frame = 0


Query: 12  GRGEDYEVQVSFHLSNDPHHIHEMGFVQLEEHSQVLSFLAP------------------X 71
           G   +YE+QVSF  S  P  I EMGFVQ E+ +QVLSFLAP                  X
Sbjct: 7   GSAPNYELQVSF--STTPQAIPEMGFVQFED-NQVLSFLAPSQSSQISQPLSGGXXXXXX 66

Query: 72  XXXXXXXXXXXXXXXXXXHSNILPRPPSWTNHQLSSTNSYQLPGTLDPKPGNDENCTATA 131
           XXXXXXXXXXX       H++++ R  SW N Q+         GT+DPK  NDENCT  A
Sbjct: 67  XXXXXXXXXXXPTNMGFSHNDLVTR-SSWNNDQV---------GTMDPKAVNDENCTGNA 126

Query: 132 TDATNSWWRNTNADKSKVK-------------TRSDVDVLDDGYKWRKYGQKVVKNSLHP 191
           +D  NSWWR++N+DKSKVK             TRSDVDVLDDGYKWRKYGQKVVKNSLHP
Sbjct: 127 SDGNNSWWRSSNSDKSKVKVRRKLREPRFCFQTRSDVDVLDDGYKWRKYGQKVVKNSLHP 186

Query: 192 SAIIIDLGILVIGGRPPKAKAQNNYQSYYRCTHSNCRVKKRVERLSEDCRMVITTYEGRH 240
                                    +SYYRCTH+NCRVKKRVERLSEDCRMVITTYEGRH
Sbjct: 187 -------------------------RSYYRCTHNNCRVKKRVERLSEDCRMVITTYEGRH 227

[Close]

BLAST of CsGy3G007180 vs. TrEMBL
Match: tr|A0A061DUM5|A0A061DUM5_THECC (WRKY family transcription factor OS=Theobroma cacao OX=3641 GN=TCM_005744 PE=4 SV=1)

HSP 1 Score: 225.3 bits (573), Expect = 1.4e-55
Identity = 130/244 (53.28%), Postives = 149/244 (61.07%), Query Frame = 0


Query: 16  DYEVQVSFHLSNDPHHIHEMGFVQLEEHSQVLSFLAPXXXXXXXXXXXXXXXXXXXHSNI 75
           +YE+QVSF   + P  IHEMGFVQ EE+  V+SFLAP                    S+ 
Sbjct: 9   NYELQVSF---STPQAIHEMGFVQFEENQAVMSFLAP-----------------AQSSHQ 68

Query: 76  LPRPPSWTNHQLSSTNSYQL-------PGTLDPKPGNDENCTATATDATNSWWRNTNADK 135
           + +P +      +STNS  +        GTLDPK  NDENC + A D  NSWWR++ ++K
Sbjct: 69  ISQPVNTAASISNSTNSTAMGFSHNDQVGTLDPKAVNDENCASNANDGNNSWWRSSASEK 128

Query: 136 SKVK-------------TRSDVDVLDDGYKWRKYGQKVVKNSLHPSAIIIDLGILVIGGR 195
           SKVK             TRSDVDVLDDGYKWRKYGQKVVKNSLHP               
Sbjct: 129 SKVKVRRKLREPRFCFQTRSDVDVLDDGYKWRKYGQKVVKNSLHP--------------- 188

Query: 196 PPKAKAQNNYQSYYRCTHSNCRVKKRVERLSEDCRMVITTYEGRHNHTPCDDSNSSEHEP 240
                     +SYYRCTH+NCRVKKRVERLSEDCRMVITTYEGRHNH+PCDDSNSSEHE 
Sbjct: 189 ----------RSYYRCTHNNCRVKKRVERLSEDCRMVITTYEGRHNHSPCDDSNSSEHEC 207

[Close]

BLAST of CsGy3G007180 vs. TrEMBL
Match: tr|A0A2P4K7B9|A0A2P4K7B9_QUESU (Putative wrky transcription factor 12 OS=Quercus suber OX=58331 GN=CFP56_57221 PE=4 SV=1)

HSP 1 Score: 220.3 bits (560), Expect = 4.6e-54
Identity = 145/257 (56.42%), Postives = 164/257 (63.81%), Query Frame = 0


Query: 16  DYEVQVSFHLSNDPHHIHEMGFVQLEEHSQVLSFLAP--------------------XXX 75
           +YE+QVSF  S  P  IH+MGFVQ E+ +QVLSFLAP                    XXX
Sbjct: 9   NYELQVSF--SATPQAIHDMGFVQFED-NQVLSFLAPSQSSXXXXXXXXXXXXXXXXXXX 68

Query: 76  XXXXXXXXXXXXXXXXHSNILPRPPSWTNHQLSSTNSYQLPGTLDPKPGNDENCTATATD 135
           XXXXXXXXXXX     H++++ R PSW N Q+         GT+DPK  NDE+ T  A+D
Sbjct: 69  XXXXXXXXXXXTMGFSHNDLVTR-PSWNNDQV---------GTMDPKAVNDESGTGNASD 128

Query: 136 ATNSWWRNTNADKSKVK-------------TRSDVDVLDDGYKWRKYGQKVVKNSLHPSA 195
             NSWWR++ +DKSKVK             TRSDVDVLDDGYKWRKYGQKVVKNSLHP  
Sbjct: 129 GNNSWWRSSTSDKSKVKVRRKLREPRFCFQTRSDVDVLDDGYKWRKYGQKVVKNSLHP-- 188

Query: 196 IIIDLGILVIGGRPPKAKAQNNYQSYYRCTHSNCRVKKRVERLSEDCRMVITTYEGRHNH 240
                                  +SYYRCTH+NCRVKKRVERLSEDCRMVITTYEGRHNH
Sbjct: 189 -----------------------RSYYRCTHNNCRVKKRVERLSEDCRMVITTYEGRHNH 227

The following BLAST results are available for this feature:

BLAST of CsGy3G007180 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004133758.1	2.1e-95	81.35	PREDICTED: probable WRKY transcription factor 12 [Cucumis sativus] >KGN56333.1 h...	[more]
XP_008437760.1	1.5e-93	80.63	PREDICTED: probable WRKY transcription factor 12 [Cucumis melo]	[more]
XP_022924619.1	7.9e-66	57.25	probable WRKY transcription factor 12 [Cucurbita moschata]	[more]
XP_022979595.1	2.3e-65	56.86	probable WRKY transcription factor 12 [Cucurbita maxima]	[more]
XP_023527795.1	2.3e-65	56.86	probable WRKY transcription factor 12 [Cucurbita pepo subsp. pepo]	[more]

BLAST of CsGy3G007180 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G44745.1	4.4e-34	64.81	WRKY family transcription factor	[more]
AT4G39410.1	1.8e-24	53.51	WRKY DNA-binding protein 13	[more]
AT1G64000.1	2.7e-20	51.06	WRKY DNA-binding protein 56	[more]
AT3G01080.1	3.6e-20	45.37	WRKY DNA-binding protein 58	[more]
AT2G46130.1	1.4e-19	48.96	WRKY DNA-binding protein 43	[more]

BLAST of CsGy3G007180 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q93WY4\|WRK12_ARATH	7.9e-33	64.81	Probable WRKY transcription factor 12 OS=Arabidopsis thaliana OX=3702 GN=WRKY12 ...	[more]
sp\|Q9SVB7\|WRK13_ARATH	3.3e-23	53.51	Probable WRKY transcription factor 13 OS=Arabidopsis thaliana OX=3702 GN=WRKY13 ...	[more]
sp\|Q8VWQ4\|WRK56_ARATH	5.0e-19	51.06	Probable WRKY transcription factor 56 OS=Arabidopsis thaliana OX=3702 GN=WRKY56 ...	[more]
sp\|Q93WU7\|WRK58_ARATH	6.5e-19	45.37	Probable WRKY transcription factor 58 OS=Arabidopsis thaliana OX=3702 GN=WRKY58 ...	[more]
sp\|Q8GY11\|WRK43_ARATH	2.5e-18	48.96	Probable WRKY transcription factor 43 OS=Arabidopsis thaliana OX=3702 GN=WRKY43 ...	[more]

BLAST of CsGy3G007180 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0L3J0\|A0A0A0L3J0_CUCSA	1.4e-95	81.35	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G116700 PE=4 SV=1	[more]
tr\|A0A1S3AVD7\|A0A1S3AVD7_CUCME	1.0e-93	80.63	probable WRKY transcription factor 12 OS=Cucumis melo OX=3656 GN=LOC103483097 PE...	[more]
tr\|A0A1U6ZIF2\|A0A1U6ZIF2_9ROSI	8.4e-56	56.37	probable WRKY transcription factor 12 OS=Juglans regia OX=51240 GN=WRKY12 PE=2 S...	[more]
tr\|A0A061DUM5\|A0A061DUM5_THECC	1.4e-55	53.28	WRKY family transcription factor OS=Theobroma cacao OX=3641 GN=TCM_005744 PE=4 S...	[more]
tr\|A0A2P4K7B9\|A0A2P4K7B9_QUESU	4.6e-54	56.42	Putative wrky transcription factor 12 OS=Quercus suber OX=58331 GN=CFP56_57221 P...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Biological Process**
Term	Definition
GO:0006355	regulation of transcription, DNA-templated

Vocabulary: **Molecular Function**
Term	Definition
GO:0003700	transcription factor activity, sequence-specific DNA binding
GO:0043565	sequence-specific DNA binding

Vocabulary: **INTERPRO**
Term	Definition
IPR036576	WRKY_dom_sf
IPR003657	WRKY_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
cellular_component	GO:0005667	transcription factor complex
molecular_function	GO:0043565	sequence-specific DNA binding
molecular_function	GO:0003700	transcription factor activity, sequence-specific DNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy3G007180.1	CsGy3G007180.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003657	WRKY domain	SMART	SM00774	WRKY_cls	coord: 140..224 e-value: 1.2E-31 score: 121.1
IPR003657	WRKY domain	PFAM	PF03106	WRKY	coord: 179..222 e-value: 1.4E-11 score: 44.5 coord: 141..161 e-value: 1.9E-6 score: 28.0
IPR003657	WRKY domain	PROSITE	PS50811	WRKY	coord: 135..222 score: 22.332
IPR036576	WRKY domain superfamily	GENE3D	G3DSA:2.20.25.80		coord: 128..164 e-value: 2.9E-11 score: 44.8
IPR036576	WRKY domain superfamily	GENE3D	G3DSA:2.20.25.80		coord: 177..225 e-value: 2.9E-13 score: 51.3
IPR036576	WRKY domain superfamily	SUPERFAMILY	SSF118290	WRKY DNA-binding domain	coord: 132..161
IPR036576	WRKY domain superfamily	SUPERFAMILY	SSF118290	WRKY DNA-binding domain	coord: 180..223
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 220..239
None	No IPR available	PANTHER	PTHR31221:SF17	WRKY TRANSCRIPTION FACTOR 12-RELATED	coord: 46..230
None	No IPR available	PANTHER	PTHR31221	FAMILY NOT NAMED	coord: 46..230

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsGy3G007180	Cla021067	Watermelon (97103) v1	cgybwmB217
CsGy3G007180	Csa3G116700	Cucumber (Chinese Long) v2	cgybcuB109
CsGy3G007180	MELO3C005937	Melon (DHL92) v3.5.1	cgybmeB200
CsGy3G007180	ClCG05G000090	Watermelon (Charleston Gray)	cgybwcgB203
CsGy3G007180	CSPI03G07040	Wild cucumber (PI 183967)	cgybcpiB110
CsGy3G007180	CmaCh06G009350	Cucurbita maxima (Rimu)	cgybcmaB430
CsGy3G007180	CmoCh06G009630	Cucurbita moschata (Rifu)	cgybcmoB401
CsGy3G007180	Lsi05G022330	Bottle gourd (USVL1VR-Ls)	cgyblsiB196
CsGy3G007180	Cp4.1LG08g00210	Cucurbita pepo (Zucchini)	cgybcpeB454
CsGy3G007180	MELO3C005937.2	Melon (DHL92) v3.6.1	cgybmedB201
CsGy3G007180	CsaV3_3G007160	Cucumber (Chinese Long) v3	cgybcucB117
CsGy3G007180	Cla97C05G080000	Watermelon (97103) v2	cgybwmbB196
CsGy3G007180	Bhi01G000457	Wax gourd	cgybwgoB272
CsGy3G007180	Carg25067	Silver-seed gourd	carcgybB0997

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsGy3G007180	Cucurbita maxima (Rimu)	cgybcmaB280
CsGy3G007180	Bottle gourd (USVL1VR-Ls)	cgyblsiB183