Cla014682 (gene) Watermelon (97103) v1

Overview
NameCla014682
Typegene
OrganismCitrullus. lanatus (Watermelon (97103) v1)
DescriptionNuclear transcription factor Y subunit B-3 (AHRD V1 ***- B6SUG8_MAIZE); contains Interpro domain(s) IPR003957 Transcription factor, CBFA/NFYB, DNA topoisomerase
LocationChr9 : 4817799 .. 4818278 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATGAAAACACAGGCATGTCAGAGAGATTAGTAGAATTTAAGTACGATTTCAGCGGCGGCGGTGGCGGTGTCGGTGGTAGCACCGGTGGTTCGAGTGAGGAAGCTGGTAACGGCGTTGGCGGGGTCGTAAAAGAGCAAGATCGGTTACTTCCAATAGCAAATGTGGGGAGGATCATGAAGCAAATTCTACCTCCAAATGCCAAAATCTCCAAAGAAGCCAAAGAAACTATGCAAGAGTGCGTGTCGGAGTTCATCAGTTTCGTGACAGGCGAGGCGTCGGATAAGTGCCATAAAGAGAAGAGGAAGACTGTTAATGGTGATGATATTTGCTGTGCTTTGGCCACACTTGGATTTGATGATTATGCTGAGCCTTTGAGAAGGTATTTGGTTAGGTATAGAGATATGGAGGGGGAGAGAGCTCAACAAAATAAGGGATGTTGCAATAATAATACTAATAATAATAATCATGATGCATGA

mRNA sequence

ATGGATGAAAACACAGGCATGTCAGAGAGATTAGTAGAATTTAAGTACGATTTCAGCGGCGGCGGTGGCGGTGTCGGTGGTAGCACCGGTGGTTCGAGTGAGGAAGCTGGTAACGGCGTTGGCGGGGTCGTAAAAGAGCAAGATCGGTTACTTCCAATAGCAAATGTGGGGAGGATCATGAAGCAAATTCTACCTCCAAATGCCAAAATCTCCAAAGAAGCCAAAGAAACTATGCAAGAGTGCGTGTCGGAGTTCATCAGTTTCGTGACAGGCGAGGCGTCGGATAAGTGCCATAAAGAGAAGAGGAAGACTGTTAATGGTGATGATATTTGCTGTGCTTTGGCCACACTTGGATTTGATGATTATGCTGAGCCTTTGAGAAGGTATTTGGTTAGGTATAGAGATATGGAGGGGGAGAGAGCTCAACAAAATAAGGGATGTTGCAATAATAATACTAATAATAATAATCATGATGCATGA

Coding sequence (CDS)

ATGGATGAAAACACAGGCATGTCAGAGAGATTAGTAGAATTTAAGTACGATTTCAGCGGCGGCGGTGGCGGTGTCGGTGGTAGCACCGGTGGTTCGAGTGAGGAAGCTGGTAACGGCGTTGGCGGGGTCGTAAAAGAGCAAGATCGGTTACTTCCAATAGCAAATGTGGGGAGGATCATGAAGCAAATTCTACCTCCAAATGCCAAAATCTCCAAAGAAGCCAAAGAAACTATGCAAGAGTGCGTGTCGGAGTTCATCAGTTTCGTGACAGGCGAGGCGTCGGATAAGTGCCATAAAGAGAAGAGGAAGACTGTTAATGGTGATGATATTTGCTGTGCTTTGGCCACACTTGGATTTGATGATTATGCTGAGCCTTTGAGAAGGTATTTGGTTAGGTATAGAGATATGGAGGGGGAGAGAGCTCAACAAAATAAGGGATGTTGCAATAATAATACTAATAATAATAATCATGATGCATGA

Protein sequence

MDENTGMSERLVEFKYDFSGGGGGVGGSTGGSSEEAGNGVGGVVKEQDRLLPIANVGRIMKQILPPNAKISKEAKETMQECVSEFISFVTGEASDKCHKEKRKTVNGDDICCALATLGFDDYAEPLRRYLVRYRDMEGERAQQNKGCCNNNTNNNNHDA
Homology
[Close]
BLAST of Cla014682 vs. Swiss-Prot
Match: NFYB5_ARATH (Nuclear transcription factor Y subunit B-5 OS=Arabidopsis thaliana GN=NFYB5 PE=2 SV=1)

HSP 1 Score: 171.8 bits (434), Expect = 6.1e-42
Identity = 86/113 (76.11%), Postives = 95/113 (84.07%), Query Frame = 1 

Query: 43  VVKEQDRLLPIANVGRIMKQILPPNAKISKEAKETMQECVSEFISFVTGEASDKCHKEKR 102
           +VKEQDRLLPIANVGRIMK ILP NAK+SKEAKETMQECVSEFISFVTGEASDKCHKEKR
Sbjct: 48  MVKEQDRLLPIANVGRIMKNILPANAKVSKEAKETMQECVSEFISFVTGEASDKCHKEKR 107

Query: 103 KTVNGDDICCALATLGFDDYAEPLRRYLVRYRDMEGERAQQN-KGCCNNNTNN 155
           KTVNGDDIC A+A LGFDDYA  L++YL RYR +EGE+   + KG   ++ +N
Sbjct: 108 KTVNGDDICWAMANLGFDDYAAQLKKYLHRYRVLEGEKPNHHGKGGPKSSPDN 160

[Close]
BLAST of Cla014682 vs. Swiss-Prot
Match: NFYB3_ORYSJ (Nuclear transcription factor Y subunit B-3 OS=Oryza sativa subsp. japonica GN=NFYB3 PE=1 SV=2)

HSP 1 Score: 165.6 bits (418), Expect = 4.4e-40
Identity = 79/123 (64.23%), Postives = 94/123 (76.42%), Query Frame = 1 

Query: 20  GGGGGV---GGSTGGSSEEAGNGVGGVVKEQDRLLPIANVGRIMKQILPPNAKISKEAKE 79
           GGGGG    G   GG     G G GG V+EQDR LPIAN+ RIMK+ +P N KI+K+AKE
Sbjct: 9   GGGGGSHESGSPRGGGGGGGGGGGGGGVREQDRFLPIANISRIMKKAIPANGKIAKDAKE 68

Query: 80  TMQECVSEFISFVTGEASDKCHKEKRKTVNGDDICCALATLGFDDYAEPLRRYLVRYRDM 139
           T+QECVSEFISF+T EASDKC +EKRKT+NGDD+  A+ATLGF+DY EPL+ YL +YR+M
Sbjct: 69  TVQECVSEFISFITSEASDKCQREKRKTINGDDLLWAMATLGFEDYIEPLKVYLQKYREM 128

[Close]
BLAST of Cla014682 vs. Swiss-Prot
Match: NFYB7_ARATH (Nuclear transcription factor Y subunit B-7 OS=Arabidopsis thaliana GN=NFYB7 PE=2 SV=1)

HSP 1 Score: 162.2 bits (409), Expect = 4.8e-39
Identity = 80/125 (64.00%), Postives = 90/125 (72.00%), Query Frame = 1 

Query: 21  GGGGVGGSTGGSSEEAGNGVGGVVKEQDRLLPIANVGRIMKQILPPNAKISKEAKETMQE 80
           G  GV  +  GS     N      KEQDR LPIANVGRIMK++LP N KISK+AKET+QE
Sbjct: 11  GSPGVAETNPGSPSSKTNNNNNNNKEQDRFLPIANVGRIMKKVLPGNGKISKDAKETVQE 70

Query: 81  CVSEFISFVTGEASDKCHKEKRKTVNGDDICCALATLGFDDYAEPLRRYLVRYRDMEGER 140
           CVSEFISFVTGEASDKC +EKRKT+NGDDI  A+ TLGF+DY  PL+ YL +YRD EGE+
Sbjct: 71  CVSEFISFVTGEASDKCQREKRKTINGDDIIWAITTLGFEDYVAPLKVYLCKYRDTEGEK 130

Query: 141 AQQNK 146
               K
Sbjct: 131 VNSPK 135

[Close]
BLAST of Cla014682 vs. Swiss-Prot
Match: NFYB_MAIZE (Nuclear transcription factor Y subunit B OS=Zea mays GN=NFY2 PE=2 SV=1)

HSP 1 Score: 161.8 bits (408), Expect = 6.3e-39
Identity = 77/117 (65.81%), Postives = 92/117 (78.63%), Query Frame = 1 

Query: 23  GGVGGSTGGSSEEAGNGVGGVVKEQDRLLPIANVGRIMKQILPPNAKISKEAKETMQECV 82
           GG GGS    S   G G GG V+EQDR LPIAN+ RIMK+ +P N KI+K+AKET+QECV
Sbjct: 9   GGGGGSHESGSPRGGGG-GGSVREQDRFLPIANISRIMKKAIPANGKIAKDAKETVQECV 68

Query: 83  SEFISFVTGEASDKCHKEKRKTVNGDDICCALATLGFDDYAEPLRRYLVRYRDMEGE 140
           SEFISF+T EASDKC +EKRKT+NGDD+  A+ATLGF+DY EPL+ YL +YR+MEG+
Sbjct: 69  SEFISFITSEASDKCQREKRKTINGDDLLWAMATLGFEDYIEPLKVYLQKYREMEGD 124

[Close]
BLAST of Cla014682 vs. Swiss-Prot
Match: NFYB2_ARATH (Nuclear transcription factor Y subunit B-2 OS=Arabidopsis thaliana GN=NFYB2 PE=2 SV=1)

HSP 1 Score: 161.4 bits (407), Expect = 8.2e-39
Identity = 83/143 (58.04%), Postives = 96/143 (67.13%), Query Frame = 1 

Query: 17  DFSGGGGGVGGSTGGSSEEAGNGVGGVVKEQDRLLPIANVGRIMKQILPPNAKISKEAKE 76
           D   GGG  G +  G S  +        +EQDR LPIANV RIMK+ LP NAKISK+AKE
Sbjct: 5   DRDSGGGQNGNNQNGQSSLSP-------REQDRFLPIANVSRIMKKALPANAKISKDAKE 64

Query: 77  TMQECVSEFISFVTGEASDKCHKEKRKTVNGDDICCALATLGFDDYAEPLRRYLVRYRDM 136
           TMQECVSEFISFVTGEASDKC KEKRKT+NGDD+  A+ TLGF+DY EPL+ YL R+R++
Sbjct: 65  TMQECVSEFISFVTGEASDKCQKEKRKTINGDDLLWAMTTLGFEDYVEPLKVYLQRFREI 124

Query: 137 EGERAQQNKGCCNNNTNNNNHDA 160
           EGER    +         +  DA
Sbjct: 125 EGERTGLGRPQTGGEVGEHQRDA 140

[Close]
BLAST of Cla014682 vs. TrEMBL
Match: A0A0A0K954_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G395250 PE=4 SV=1)

HSP 1 Score: 309.7 bits (792), Expect = 2.1e-81
Identity = 150/159 (94.34%), Postives = 154/159 (96.86%), Query Frame = 1 

Query: 1   MDENTGMSERLVEFKYDFSGGGG-GVGGSTGGSSEEAGNGVGGVVKEQDRLLPIANVGRI 60
           MDENTGM ER +EFKYDF+GGG  GVGGSTGGSSEEAGNGVGGVVKEQDRLLPIANVGRI
Sbjct: 1   MDENTGMPERSIEFKYDFTGGGSSGVGGSTGGSSEEAGNGVGGVVKEQDRLLPIANVGRI 60

Query: 61  MKQILPPNAKISKEAKETMQECVSEFISFVTGEASDKCHKEKRKTVNGDDICCALATLGF 120
           MKQILPPNAKISKEAKETMQECVSEFISFVTGEASDKCHKEKRKTVNGDDICCALATLGF
Sbjct: 61  MKQILPPNAKISKEAKETMQECVSEFISFVTGEASDKCHKEKRKTVNGDDICCALATLGF 120

Query: 121 DDYAEPLRRYLVRYRDMEGERAQQNKGCCNNNTNNNNHD 159
           DDYAEPLRRYLVRYRDMEGERAQQNKGCCNN+ NNNN+D
Sbjct: 121 DDYAEPLRRYLVRYRDMEGERAQQNKGCCNNSNNNNNND 159

[Close]
BLAST of Cla014682 vs. TrEMBL
Match: A0A0R0KWV4_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_02G154000 PE=4 SV=1)

HSP 1 Score: 207.2 bits (526), Expect = 1.5e-50
Identity = 110/155 (70.97%), Postives = 117/155 (75.48%), Query Frame = 1 

Query: 2   DENTGMSERLVEFKYDFSGGGGGVGGSTGGSSEEAGNGVGGVVKEQDRLLPIANVGRIMK 61
           D N G       FKY+F+         T    E        V+KEQDRLLPIANVGRIMK
Sbjct: 3   DNNIGKVLEREGFKYNFTAAAS----DTSAQDE--------VIKEQDRLLPIANVGRIMK 62

Query: 62  QILPPNAKISKEAKETMQECVSEFISFVTGEASDKCHKEKRKTVNGDDICCALATLGFDD 121
           QILPPNAKISKEAKETMQECVSEFISFVTGEASDKCHKEKRKTVNGDDIC ALATLGFDD
Sbjct: 63  QILPPNAKISKEAKETMQECVSEFISFVTGEASDKCHKEKRKTVNGDDICWALATLGFDD 122

Query: 122 YAEPLRRYLVRYRDMEGERAQQNKGCCNNNTNNNN 157
           Y+EPL+RYL +YR+ EGERA QNKG  NNNT  NN
Sbjct: 123 YSEPLKRYLHKYREFEGERANQNKG--NNNTYENN 143

[Close]
BLAST of Cla014682 vs. TrEMBL
Match: A0A0H3XV97_VERFO (Nuclear transcription factor Y subunit B-9 OS=Vernicia fordii PE=2 SV=1)

HSP 1 Score: 205.3 bits (521), Expect = 5.5e-50
Identity = 102/120 (85.00%), Postives = 108/120 (90.00%), Query Frame = 1 

Query: 30  GGSSEEAGNGVGGVVKEQDRLLPIANVGRIMKQILPPNAKISKEAKETMQECVSEFISFV 89
           GG+S   G+G  G++KEQDRLLPIANVGRIMKQILPPNAKISKEAKETMQECVSEFISFV
Sbjct: 19  GGASSGGGSGEDGIIKEQDRLLPIANVGRIMKQILPPNAKISKEAKETMQECVSEFISFV 78

Query: 90  TGEASDKCHKEKRKTVNGDDICCALATLGFDDYAEPLRRYLVRYRDMEGERAQQNKGCCN 149
           TGEASDKCHKEKRKTVNGDDIC ALATLGFDDYAEPLRRYL +YR+ EGERA  NKG  N
Sbjct: 79  TGEASDKCHKEKRKTVNGDDICWALATLGFDDYAEPLRRYLYKYREQEGERA-TNKGSNN 137

[Close]
BLAST of Cla014682 vs. TrEMBL
Match: A0A0B2P810_GLYSO (Nuclear transcription factor Y subunit B-5 OS=Glycine soja GN=glysoja_010966 PE=4 SV=1)

HSP 1 Score: 203.8 bits (517), Expect = 1.6e-49
Identity = 107/155 (69.03%), Postives = 116/155 (74.84%), Query Frame = 1 

Query: 1   MDENTGMSERLVEFKYDFSGGGGGVGGSTGGSSEEAGNGVGGVVKEQDRLLPIANVGRIM 60
           M +N G       FKY+F+    G                 GV+KEQDRLLPIANVGRIM
Sbjct: 1   MGDNIGKVLDREGFKYNFTASASGTSAQD------------GVIKEQDRLLPIANVGRIM 60

Query: 61  KQILPPNAKISKEAKETMQECVSEFISFVTGEASDKCHKEKRKTVNGDDICCALATLGFD 120
           KQILPPNAKISKEAKETMQE VSEFISFVTGEASDKCHKEKRKTVNGDDIC ALATLGFD
Sbjct: 61  KQILPPNAKISKEAKETMQESVSEFISFVTGEASDKCHKEKRKTVNGDDICWALATLGFD 120

Query: 121 DYAEPLRRYLVRYRDMEGERAQQNKGCCNNNTNNN 156
           DY+EPL+RYL +YR+MEGERA QNKG  +N   NN
Sbjct: 121 DYSEPLKRYLYKYREMEGERANQNKG--SNGYENN 141

[Close]
BLAST of Cla014682 vs. TrEMBL
Match: I1L7X0_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_10G020100 PE=4 SV=1)

HSP 1 Score: 203.8 bits (517), Expect = 1.6e-49
Identity = 107/155 (69.03%), Postives = 116/155 (74.84%), Query Frame = 1 

Query: 1   MDENTGMSERLVEFKYDFSGGGGGVGGSTGGSSEEAGNGVGGVVKEQDRLLPIANVGRIM 60
           M +N G       FKY+F+    G                 GV+KEQDRLLPIANVGRIM
Sbjct: 1   MGDNIGKVLDREGFKYNFTASASGTSAQD------------GVIKEQDRLLPIANVGRIM 60

Query: 61  KQILPPNAKISKEAKETMQECVSEFISFVTGEASDKCHKEKRKTVNGDDICCALATLGFD 120
           KQILPPNAKISKEAKETMQE VSEFISFVTGEASDKCHKEKRKTVNGDDIC ALATLGFD
Sbjct: 61  KQILPPNAKISKEAKETMQESVSEFISFVTGEASDKCHKEKRKTVNGDDICWALATLGFD 120

Query: 121 DYAEPLRRYLVRYRDMEGERAQQNKGCCNNNTNNN 156
           DY+EPL+RYL +YR+MEGERA QNKG  +N   NN
Sbjct: 121 DYSEPLKRYLYKYREMEGERANQNKG--SNGYENN 141

[Close]
BLAST of Cla014682 vs. NCBI nr
Match: gi|659101456|ref|XP_008451614.1| (PREDICTED: nuclear transcription factor Y subunit B-1 [Cucumis melo])

HSP 1 Score: 310.1 bits (793), Expect = 2.3e-81
Identity = 151/159 (94.97%), Postives = 154/159 (96.86%), Query Frame = 1 

Query: 1   MDENTGMSERLVEFKYDFSGGGG-GVGGSTGGSSEEAGNGVGGVVKEQDRLLPIANVGRI 60
           MDENTGM ER VEFKYDF+GGG  GVGGSTGGSSEEAGNGVGGVVKEQDRLLPIANVGRI
Sbjct: 1   MDENTGMPERSVEFKYDFTGGGSSGVGGSTGGSSEEAGNGVGGVVKEQDRLLPIANVGRI 60

Query: 61  MKQILPPNAKISKEAKETMQECVSEFISFVTGEASDKCHKEKRKTVNGDDICCALATLGF 120
           MKQILPPNAKISKEAKETMQECVSEFISFVTGEASDKCHKEKRKTVNGDDICCALATLGF
Sbjct: 61  MKQILPPNAKISKEAKETMQECVSEFISFVTGEASDKCHKEKRKTVNGDDICCALATLGF 120

Query: 121 DDYAEPLRRYLVRYRDMEGERAQQNKGCCNNNTNNNNHD 159
           DDYAEPLRRYLVRYRDMEGERAQQNKGCCNNN NNNN++
Sbjct: 121 DDYAEPLRRYLVRYRDMEGERAQQNKGCCNNNNNNNNNN 159

[Close]
BLAST of Cla014682 vs. NCBI nr
Match: gi|778727953|ref|XP_011659350.1| (PREDICTED: nuclear transcription factor Y subunit B-5 [Cucumis sativus])

HSP 1 Score: 309.7 bits (792), Expect = 3.0e-81
Identity = 150/159 (94.34%), Postives = 154/159 (96.86%), Query Frame = 1 

Query: 1   MDENTGMSERLVEFKYDFSGGGG-GVGGSTGGSSEEAGNGVGGVVKEQDRLLPIANVGRI 60
           MDENTGM ER +EFKYDF+GGG  GVGGSTGGSSEEAGNGVGGVVKEQDRLLPIANVGRI
Sbjct: 1   MDENTGMPERSIEFKYDFTGGGSSGVGGSTGGSSEEAGNGVGGVVKEQDRLLPIANVGRI 60

Query: 61  MKQILPPNAKISKEAKETMQECVSEFISFVTGEASDKCHKEKRKTVNGDDICCALATLGF 120
           MKQILPPNAKISKEAKETMQECVSEFISFVTGEASDKCHKEKRKTVNGDDICCALATLGF
Sbjct: 61  MKQILPPNAKISKEAKETMQECVSEFISFVTGEASDKCHKEKRKTVNGDDICCALATLGF 120

Query: 121 DDYAEPLRRYLVRYRDMEGERAQQNKGCCNNNTNNNNHD 159
           DDYAEPLRRYLVRYRDMEGERAQQNKGCCNN+ NNNN+D
Sbjct: 121 DDYAEPLRRYLVRYRDMEGERAQQNKGCCNNSNNNNNND 159

[Close]
BLAST of Cla014682 vs. NCBI nr
Match: gi|356500286|ref|XP_003518964.1| (PREDICTED: nuclear transcription factor Y subunit B-5 [Glycine max])

HSP 1 Score: 207.2 bits (526), Expect = 2.1e-50
Identity = 110/155 (70.97%), Postives = 117/155 (75.48%), Query Frame = 1 

Query: 2   DENTGMSERLVEFKYDFSGGGGGVGGSTGGSSEEAGNGVGGVVKEQDRLLPIANVGRIMK 61
           D N G       FKY+F+         T    E        V+KEQDRLLPIANVGRIMK
Sbjct: 3   DNNIGKVLEREGFKYNFTAAAS----DTSAQDE--------VIKEQDRLLPIANVGRIMK 62

Query: 62  QILPPNAKISKEAKETMQECVSEFISFVTGEASDKCHKEKRKTVNGDDICCALATLGFDD 121
           QILPPNAKISKEAKETMQECVSEFISFVTGEASDKCHKEKRKTVNGDDIC ALATLGFDD
Sbjct: 63  QILPPNAKISKEAKETMQECVSEFISFVTGEASDKCHKEKRKTVNGDDICWALATLGFDD 122

Query: 122 YAEPLRRYLVRYRDMEGERAQQNKGCCNNNTNNNN 157
           Y+EPL+RYL +YR+ EGERA QNKG  NNNT  NN
Sbjct: 123 YSEPLKRYLHKYREFEGERANQNKG--NNNTYENN 143

[Close]
BLAST of Cla014682 vs. NCBI nr
Match: gi|837378381|gb|AKM95036.1| (nuclear transcription factor Y subunit B-9 [Vernicia fordii])

HSP 1 Score: 205.3 bits (521), Expect = 7.9e-50
Identity = 102/120 (85.00%), Postives = 108/120 (90.00%), Query Frame = 1 

Query: 30  GGSSEEAGNGVGGVVKEQDRLLPIANVGRIMKQILPPNAKISKEAKETMQECVSEFISFV 89
           GG+S   G+G  G++KEQDRLLPIANVGRIMKQILPPNAKISKEAKETMQECVSEFISFV
Sbjct: 19  GGASSGGGSGEDGIIKEQDRLLPIANVGRIMKQILPPNAKISKEAKETMQECVSEFISFV 78

Query: 90  TGEASDKCHKEKRKTVNGDDICCALATLGFDDYAEPLRRYLVRYRDMEGERAQQNKGCCN 149
           TGEASDKCHKEKRKTVNGDDIC ALATLGFDDYAEPLRRYL +YR+ EGERA  NKG  N
Sbjct: 79  TGEASDKCHKEKRKTVNGDDICWALATLGFDDYAEPLRRYLYKYREQEGERA-TNKGSNN 137

[Close]
BLAST of Cla014682 vs. NCBI nr
Match: gi|1012360302|gb|KYP71486.1| (Nuclear transcription factor Y subunit B-5 [Cajanus cajan])

HSP 1 Score: 203.8 bits (517), Expect = 2.3e-49
Identity = 107/155 (69.03%), Postives = 120/155 (77.42%), Query Frame = 1 

Query: 1   MDENTGMSERLVEFKYDFSGGGGGVGGSTGGSSEEAGNGVGGVVKEQDRLLPIANVGRIM 60
           M +N G       FKY+F+        ST  +S+       GV+KEQDRLLPIANVGRIM
Sbjct: 1   MGDNIGKGSHREGFKYNFTA-------STTAASDTCSLQ-DGVIKEQDRLLPIANVGRIM 60

Query: 61  KQILPPNAKISKEAKETMQECVSEFISFVTGEASDKCHKEKRKTVNGDDICCALATLGFD 120
           KQILPPNAKISKEAKETMQECVSEFISFVTGEASDKCHKEKRKTVNGDDIC ALATLGFD
Sbjct: 61  KQILPPNAKISKEAKETMQECVSEFISFVTGEASDKCHKEKRKTVNGDDICYALATLGFD 120

Query: 121 DYAEPLRRYLVRYRDMEGERAQQNKGCCNNNTNNN 156
           DY +PL+RYL +YR++EGE+A QNK   NN+  NN
Sbjct: 121 DYTDPLKRYLHKYRELEGEKANQNK--ANNSYENN 145

The following BLAST results are available for this feature:
BLAST of Cla014682 vs. Swiss-Prot
Match NameE-valueIdentityDescription
NFYB5_ARATH6.1e-4276.11Nuclear transcription factor Y subunit B-5 OS=Arabidopsis thaliana GN=NFYB5 PE=2... [more]
NFYB3_ORYSJ4.4e-4064.23Nuclear transcription factor Y subunit B-3 OS=Oryza sativa subsp. japonica GN=NF... [more]
NFYB7_ARATH4.8e-3964.00Nuclear transcription factor Y subunit B-7 OS=Arabidopsis thaliana GN=NFYB7 PE=2... [more]
NFYB_MAIZE6.3e-3965.81Nuclear transcription factor Y subunit B OS=Zea mays GN=NFY2 PE=2 SV=1[more]
NFYB2_ARATH8.2e-3958.04Nuclear transcription factor Y subunit B-2 OS=Arabidopsis thaliana GN=NFYB2 PE=2... [more]
BLAST of Cla014682 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K954_CUCSA2.1e-8194.34Uncharacterized protein OS=Cucumis sativus GN=Csa_7G395250 PE=4 SV=1[more]
A0A0R0KWV4_SOYBN1.5e-5070.97Uncharacterized protein OS=Glycine max GN=GLYMA_02G154000 PE=4 SV=1[more]
A0A0H3XV97_VERFO5.5e-5085.00Nuclear transcription factor Y subunit B-9 OS=Vernicia fordii PE=2 SV=1[more]
A0A0B2P810_GLYSO1.6e-4969.03Nuclear transcription factor Y subunit B-5 OS=Glycine soja GN=glysoja_010966 PE=... [more]
I1L7X0_SOYBN1.6e-4969.03Uncharacterized protein OS=Glycine max GN=GLYMA_10G020100 PE=4 SV=1[more]
BLAST of Cla014682 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659101456|ref|XP_008451614.1|2.3e-8194.97PREDICTED: nuclear transcription factor Y subunit B-1 [Cucumis melo][more]
gi|778727953|ref|XP_011659350.1|3.0e-8194.34PREDICTED: nuclear transcription factor Y subunit B-5 [Cucumis sativus][more]
gi|356500286|ref|XP_003518964.1|2.1e-5070.97PREDICTED: nuclear transcription factor Y subunit B-5 [Glycine max][more]
gi|837378381|gb|AKM95036.1|7.9e-5085.00nuclear transcription factor Y subunit B-9 [Vernicia fordii][more]
gi|1012360302|gb|KYP71486.1|2.3e-4969.03Nuclear transcription factor Y subunit B-5 [Cajanus cajan][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR003956Transcrpt_fac_NFYB/HAP3_CS
IPR003958CBFA_NFYB_domain
IPR009072Histone-fold
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Vocabulary: Molecular Function
TermDefinition
GO:0043565sequence-specific DNA binding
GO:0046982protein heterodimerization activity
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
biological_process GO:0045893 positive regulation of transcription, DNA-templated
cellular_component GO:0005634 nucleus
molecular_function GO:0046982 protein heterodimerization activity
molecular_function GO:0043565 sequence-specific DNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla014682Cla014682.1mRNA


InterPro
Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003956Transcription factor, NFYB/HAP3, conserved sitePROSITEPS00685NFYB_HAP3coord: 81..97
scor
IPR003958Transcription factor CBF/NF-Y/archaeal histone domainPFAMPF00808CBFD_NFYB_HMFcoord: 50..114
score: 1.4
IPR009072Histone-foldGENE3DG3DSA:1.10.20.10coord: 43..150
score: 1.2
IPR009072Histone-foldunknownSSF47113Histone-foldcoord: 47..156
score: 8.69
NoneNo IPR availablePRINTSPR00615CCAATSUBUNTAcoord: 97..115
score: 1.1E-17coord: 78..96
score: 1.1E-17coord: 116..134
score: 1.1
NoneNo IPR availablePANTHERPTHR11064CCAAT-BINDING TRANSCRIPTION FACTOR-RELATEDcoord: 28..145
score: 7.6
NoneNo IPR availablePANTHERPTHR11064:SF42NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT B-5coord: 28..145
score: 7.6

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cla014682Cla97C09G168740Watermelon (97103) v2wmwmbB041
Cla014682Csa7G395250Cucumber (Chinese Long) v2cuwmB568
Cla014682MELO3C016042Melon (DHL92) v3.5.1mewmB184
Cla014682ClCG09G006170Watermelon (Charleston Gray)wcgwmB007
Cla014682CSPI07G17200Wild cucumber (PI 183967)cpiwmB587
Cla014682Cucsa.025370Cucumber (Gy14) v1cgywmB672
Cla014682CmaCh17G011110Cucurbita maxima (Rimu)cmawmB328
Cla014682CmoCh17G010870Cucurbita moschata (Rifu)cmowmB322
Cla014682Lsi02G023730Bottle gourd (USVL1VR-Ls)lsiwmB175
Cla014682Cp4.1LG12g05460Cucurbita pepo (Zucchini)cpewmB131
Cla014682CsGy7G015620Cucumber (Gy14) v2cgybwmB530
Cla014682MELO3C016042.2Melon (DHL92) v3.6.1medwmB181
Cla014682CsaV3_7G028980Cucumber (Chinese Long) v3cucwmB593
Cla014682BhiUN245G60Wax gourdwgowmB161
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cla014682Cucurbita maxima (Rimu)cmawmB780
Cla014682Cucurbita maxima (Rimu)cmawmB856
Cla014682Cucurbita maxima (Rimu)cmawmB861
Cla014682Cucurbita moschata (Rifu)cmowmB848
Cla014682Melon (DHL92) v3.5.1mewmB088
Cla014682Watermelon (Charleston Gray)wcgwmB319
Cla014682Cucumber (Chinese Long) v2cuwmB191
Cla014682Cucurbita pepo (Zucchini)cpewmB311
Cla014682Cucurbita pepo (Zucchini)cpewmB824
Cla014682Melon (DHL92) v3.6.1medwmB085
Cla014682Silver-seed gourdcarwmB0106
Cla014682Silver-seed gourdcarwmB0861
Cla014682Watermelon (97103) v2wmwmbB027
Cla014682Watermelon (97103) v2wmwmbB030
Cla014682Wax gourdwgowmB170
Cla014682Watermelon (97103) v1wmwmB022
Cla014682Watermelon (97103) v1wmwmB037
Cla014682Cucurbita moschata (Rifu)cmowmB843