ClCG01G013920 (gene) Watermelon (Charleston Gray) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	ClCG01G013920
Type	gene
Organism	Citrullus lanatus (Watermelon (Charleston Gray))
Description	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family LENGTH=227
Location	CG_Chr01 : 27978152 .. 27979194 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGAAGCACTATAGCTACTACACAAGGAGTAACATCATCATCAGCAGCACAAAGATGCTATAGACAACAACATGGGACGACAGCAAAACGCACAAAGGTCATAAGAATCATAGGAAGAAGCTTGTTGGGTGTAATATTCCTTGTTGCTCTTGCAATTCTCACATGTTGGCTTGTTGTCTTCCCTAAAACCCCACGTCTCATGGTGGAAACTGGCAAAGTCACACCCACTGGTTCAACTCATAATGTGCTCAATGCCACCATAGCTTTCTCTATCAAAACCTCCAACCCTAACAAAAGAGCCTCCCTTCATATGGATTCTATGAAGATGATAGTCAATTGCAATATGGGCAAGCCGTTTTCCTCCACCATCCCCACCTTCATATTGATGCCCCAAAATGAGACCATCTTGAACCCCGTGGTCGATGTCAACTTCATATACCCATTTGGCCGCCCGGTGCCTTCGGACTGGATACGTCTGGAGCTTCGCTTCTTAGCTAAAATCAGGTATAAATATTTGACTTTTTGAGAAAGTGTTTGGAATACTTTTATGAATTGTTTAATTTAAACGATAAATTCTTTTAGAAAAAATACAAATGTTTGGCAACCATTTAAATATATTTCGAAGACCATTAAAGTTTTTGTTTTAAATAGTTTTAAGTTAATTATCCAAACATGCATAAAACAGATATATTAAAAACATACAAACGTTGTTAGGTTTTGTTGACGTCAAAGAATAAATTGGTTGGATTTACCTCAGTTTTAACCAAAGTTACTAGCATGATAACCTTTTTATTTTTTTGTTTTTAGATTCTTAATTTTCCTTTTGTTATCTCTTCTTTAATTCTAAGGGTTTTTTGTTTTTCAAAATCTAAGCCAAGATTTGTCTCTCTAAAACTTTATGGCTCTGTTCGTATCAGCTACATTCTCAACAGATGGACGTCGAAACCTCGGTTGCTCGAGATCTATTGCGATCACCTGTGGCTTAAGATCAATGATTCTACACCTAATTTTGATAATACCAAATGCAAAGTGGATCTTTGA

mRNA sequence

ATGAGAAGCACTATAGCTACTACACAAGGAGTAACATCATCATCAGCAGCACAAAGATGCTATAGACAACAACATGGGACGACAGCAAAACGCACAAAGGTCATAAGAATCATAGGAAGAAGCTTGTTGGGTGTAATATTCCTTGTTGCTCTTGCAATTCTCACATGTTGGCTTGTTGTCTTCCCTAAAACCCCACGTCTCATGGTGGAAACTGGCAAAGTCACACCCACTGGTTCAACTCATAATGTGCTCAATGCCACCATAGCTTTCTCTATCAAAACCTCCAACCCTAACAAAAGAGCCTCCCTTCATATGGATTCTATGAAGATGATAGTCAATTGCAATATGGGCAAGCCGTTTTCCTCCACCATCCCCACCTTCATATTGATGCCCCAAAATGAGACCATCTTGAACCCCGTGGTCGATGTCAACTTCATATACCCATTTGGCCGCCCGGTGCCTTCGGACTGGATACGTCTGGAGCTTCGCTTCTTAGCTAAAATCAGCTACATTCTCAACAGATGGACGTCGAAACCTCGGTTGCTCGAGATCTATTGCGATCACCTGTGGCTTAAGATCAATGATTCTACACCTAATTTTGATAATACCAAATGCAAAGTGGATCTTTGA

Coding sequence (CDS)

ATGAGAAGCACTATAGCTACTACACAAGGAGTAACATCATCATCAGCAGCACAAAGATGCTATAGACAACAACATGGGACGACAGCAAAACGCACAAAGGTCATAAGAATCATAGGAAGAAGCTTGTTGGGTGTAATATTCCTTGTTGCTCTTGCAATTCTCACATGTTGGCTTGTTGTCTTCCCTAAAACCCCACGTCTCATGGTGGAAACTGGCAAAGTCACACCCACTGGTTCAACTCATAATGTGCTCAATGCCACCATAGCTTTCTCTATCAAAACCTCCAACCCTAACAAAAGAGCCTCCCTTCATATGGATTCTATGAAGATGATAGTCAATTGCAATATGGGCAAGCCGTTTTCCTCCACCATCCCCACCTTCATATTGATGCCCCAAAATGAGACCATCTTGAACCCCGTGGTCGATGTCAACTTCATATACCCATTTGGCCGCCCGGTGCCTTCGGACTGGATACGTCTGGAGCTTCGCTTCTTAGCTAAAATCAGCTACATTCTCAACAGATGGACGTCGAAACCTCGGTTGCTCGAGATCTATTGCGATCACCTGTGGCTTAAGATCAATGATTCTACACCTAATTTTGATAATACCAAATGCAAAGTGGATCTTTGA

Protein sequence

MRSTIATTQGVTSSSAAQRCYRQQHGTTAKRTKVIRIIGRSLLGVIFLVALAILTCWLVVFPKTPRLMVETGKVTPTGSTHNVLNATIAFSIKTSNPNKRASLHMDSMKMIVNCNMGKPFSSTIPTFILMPQNETILNPVVDVNFIYPFGRPVPSDWIRLELRFLAKISYILNRWTSKPRLLEIYCDHLWLKINDSTPNFDNTKCKVDL

Homology

[Close]

BLAST of ClCG01G013920 vs. TrEMBL
Match: A0A0A0LSU5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G132730 PE=4 SV=1)

HSP 1 Score: 291.6 bits (745), Expect = 7.7e-76
Identity = 144/211 (68.25%), Postives = 171/211 (81.04%), Query Frame = 1


Query: 1   MRSTIATTQGVTSS--SAAQRCYRQQHGTTAKRTKVIRIIGRSLLGVIFLVALAILTCWL 60
           MRST    +G +SS   A +R + +Q  TT KRT++IRIIGRSLL VI  +++AI+TCWL
Sbjct: 1   MRSTTTQGEGASSSIIEAPKRSFCRQRETT-KRTRIIRIIGRSLLSVIIFLSVAIITCWL 60

Query: 61  VVFPKTPRLMVETGKVTPTGSTHNVLNATIAFSIKTSNPNKRASLHMDSMKMIVNCNMGK 120
           VVFP+TPRLMVET KVT  GST+  LNATI F IK+ NPNK+AS+HMDS+KMIV+  MG 
Sbjct: 61  VVFPRTPRLMVETSKVTAHGSTNRHLNATIVFYIKSYNPNKKASIHMDSVKMIVSDYMGL 120

Query: 121 PFSSTIPTFILMPQNETILNPVVDVNFIYPFGRPVPSDWIRLELRFLAKISYILNRWTSK 180
           PF STIPTF LMP+NE + N  V VNF+YPFGRPV SDW+ LELRF A++SYI+NRW SK
Sbjct: 121 PFHSTIPTFTLMPRNEMVFNSTVRVNFMYPFGRPVHSDWVHLELRFSAQVSYIVNRWRSK 180

Query: 181 PRLLEIYCDHLWLKINDSTPNFDNTKCKVDL 210
           PRLLEIYCDHLWL+INDSTPNFD TKC+VDL
Sbjct: 181 PRLLEIYCDHLWLRINDSTPNFDKTKCRVDL 210

[Close]

BLAST of ClCG01G013920 vs. TrEMBL
Match: A0A0A0LV68_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G132740 PE=4 SV=1)

HSP 1 Score: 253.1 bits (645), Expect = 3.0e-64
Identity = 128/211 (60.66%), Postives = 156/211 (73.93%), Query Frame = 1


Query: 3   STIATTQGVTSSS----AAQRCYRQQHGTTAKRTKVIRIIGRSLLGVIFLVALAILTCWL 62
           +T  TTQG  SSS    A +R   +QHG  AKRT+VIRIIGRSLL  I L+ +AILTCW 
Sbjct: 6   TTTTTTQGEASSSSIIRAPKRGAYRQHGI-AKRTRVIRIIGRSLLCAIMLLGIAILTCWF 65

Query: 63  VVFPKTPRLMVETGKVTPTGSTHNVLNATIAFSIKTSNPNKRASLHMDSMKMIVNCNMGK 122
           VV P+TP+LMVE+G+VT   ST   LNATI F+I++ NPNKRAS+++DSMKM V   M  
Sbjct: 66  VVIPRTPQLMVESGQVTGYHSTIRKLNATIVFNIRSYNPNKRASIYVDSMKMTVKNYMSV 125

Query: 123 PFSSTIPTFILMPQNETILNPVVDVNFIYPFGRPVPSDWIRLELRFLAKISYILNRWTSK 182
           PF S IP F + P+N T+L P + VN IYPFGRP+ + WI +EL F AK+SYI NRW SK
Sbjct: 126 PFHSDIPNFTMTPRNMTVLTPTILVNCIYPFGRPLHAGWIHIELSFSAKVSYIFNRWASK 185

Query: 183 PRLLEIYCDHLWLKINDSTPNFDNTKCKVDL 210
           PRL+EIYC+H W KI+DS PNFDN KC+VDL
Sbjct: 186 PRLMEIYCNHFWFKIDDSMPNFDNIKCQVDL 215

[Close]

BLAST of ClCG01G013920 vs. TrEMBL
Match: A0A0A0LY09_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G132760 PE=4 SV=1)

HSP 1 Score: 229.9 bits (585), Expect = 2.8e-57
Identity = 124/208 (59.62%), Postives = 154/208 (74.04%), Query Frame = 1


Query: 1   MRSTIATTQGVTSSSAAQRCYRQQHGTTAKRTKVIRIIGRSLLGVIFLVALAILTCWLVV 60
           MRST  TT                HG T KRT++IR++GRSLLGVIFLVAL ++ CWLVV
Sbjct: 1   MRSTTTTTT---------------HGIT-KRTRLIRVLGRSLLGVIFLVALGMIICWLVV 60

Query: 61  FPKTPRLMVETGKVTPTGSTHNVLNATIAFSIKTSNPNKRASLHMDSMKMIVNCNMGKPF 120
            PK+PRL+VETGKV    ST ++LNATIAF++K+ NPNKRAS+HMD M+MIV+ NMG  F
Sbjct: 61  IPKSPRLIVETGKVIAHSSTISMLNATIAFTVKSYNPNKRASIHMDYMRMIVD-NMGVRF 120

Query: 121 SSTIPTFILMPQNETILNPVVDVNFIYPFGRPVPSDWIRLELRFLAKISYILNRWTSKPR 180
           SS IP+F L P+N+T+L+  V VNF YPFG    ++ I  EL+F A++SY + +W SKPR
Sbjct: 121 SSAIPSFTLTPRNQTVLSSAVQVNFEYPFGY---TEEINPELQFSAEVSYSIKKWMSKPR 180

Query: 181 LLEIYCDHLWLKINDSTPNFDNTKCKVD 209
           LLEIYC+H+ LKINDST  FDNTKCKVD
Sbjct: 181 LLEIYCNHILLKINDSTA-FDNTKCKVD 187

[Close]

BLAST of ClCG01G013920 vs. TrEMBL
Match: A0A0A0LVK9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G132770 PE=4 SV=1)

HSP 1 Score: 224.6 bits (571), Expect = 1.2e-55
Identity = 122/209 (58.37%), Postives = 156/209 (74.64%), Query Frame = 1


Query: 1   MRSTIATTQGVTSSSAAQRCYRQQHGTTAKRTKVIRIIGRSLLGVIFLVALAILTCWLVV 60
           MRS+  T +G  SSS  ++  + Q+ TT K+T++IRIIGRSLL VIFLV LA++ CWLVV
Sbjct: 1   MRSS-TTAKGEASSS--KKSSKGQNETT-KKTRIIRIIGRSLLSVIFLVGLAMVICWLVV 60

Query: 61  FPKTPRLMVETGKVTPTGSTHNVLNATIAFSIKTSNPNKRASLHMDSMKMIVNCNMGKPF 120
           FPK PR+ VETG+V    STHN+LNATI F++K  NPNKRAS+H+ SM+MIV  +MG+ F
Sbjct: 61  FPKNPRIFVETGRVIAHNSTHNMLNATIVFTVKCYNPNKRASVHLHSMRMIVT-SMGQAF 120

Query: 121 SSTIPTFILMPQNETILNPVVDVNFIYPFGRPVPSDWIRLELRFLAKISYILNRWTSKPR 180
           SS IPTF+  P N+T+L+P V+VNF YPFG     + I  EL F A+ISY +  WTS+PR
Sbjct: 121 SSVIPTFMQTPGNQTVLSPAVEVNFDYPFGH---QEEINPELHFSAEISYSVEHWTSRPR 180

Query: 181 LLEIYCDHLWLKINDSTPNFDNTKCKVDL 210
           LL IYC++L L+IND T  F+NTKC VDL
Sbjct: 181 LLLIYCNNLLLRIND-TRTFENTKCNVDL 200

[Close]

BLAST of ClCG01G013920 vs. TrEMBL
Match: A0A0A0LSV0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G134270 PE=4 SV=1)

HSP 1 Score: 212.6 bits (540), Expect = 4.5e-52
Identity = 111/201 (55.22%), Postives = 148/201 (73.63%), Query Frame = 1


Query: 12  TSSSAAQRCYRQQHGTTAKRTKVIRIIGRSLLGVIFLVALAILTCWLVVFPKTPRLMVET 71
           +SSS+ +  Y  +HG TAKRT+V+RI GR+LLG++ LVA+A++ CWL+VFP+ P ++VET
Sbjct: 15  SSSSSKEMSYVIKHG-TAKRTRVLRITGRTLLGLMILVAIAMIICWLIVFPRNPDIIVET 74

Query: 72  GKVTPTGSTHNVLNATIAFSIKTSNPNKRASLHMDSMKMIVNCNMGKPFSSTIPTFILMP 131
           G+V P   T   LNATIAF++ + NPNK+AS+ MDSM+MIV+ +MG  F S IP+F   P
Sbjct: 75  GQVIPHSLTDRKLNATIAFTVTSYNPNKKASIRMDSMRMIVS-DMGLSFWSDIPSFTQPP 134

Query: 132 QNETILNPVVDVNFIYPFGRP---VPSDWIRLELRFLAKISYILNRWTSKPRLLEIYCDH 191
           +N+T+L   +  NFIYPFG     +  + I  ELRF AK+SYI+ RWTS+ RL+E+YCD 
Sbjct: 135 KNKTVLTSTIQGNFIYPFGHMKELMKLEGISPELRFSAKVSYIMERWTSRDRLVEVYCDS 194

Query: 192 LWLKINDSTPNFDNTKCKVDL 210
           L LK NDST  FDN KCKVDL
Sbjct: 195 LRLKFNDSTV-FDNKKCKVDL 212

[Close]

BLAST of ClCG01G013920 vs. TAIR10
Match: AT3G11660.1 (AT3G11660.1 NDR1/HIN1-like 1)

HSP 1 Score: 48.9 bits (115), Expect = 4.4e-06
Identity = 31/123 (25.20%), Postives = 60/123 (48.78%), Query Frame = 1


Query: 23  QQHGTTAKRTKVIRIIGRSLLGVIFLVALAILTCWLVVFPKTPRLMVETGKV---TPTGS 82
           + HG +  R K+IR I  S++ V+F++ L IL  W ++ P  PR +++   V     +G+
Sbjct: 5   ENHGHS--RRKLIRRIFWSIIFVLFIIFLTILLIWAILQPSKPRFILQDATVYAFNVSGN 64

Query: 83  THNVLNATIAFSIKTSNPNKRASLHMDSMKMIVNCNMGK-PFSSTIPTFILMPQNETILN 142
             N+L +    ++ + NPN +  ++ D + +       +  F ++IP      ++  I +
Sbjct: 65  PPNLLTSNFQITLSSRNPNNKIGIYYDRLDVYATYRSQQITFPTSIPPTYQGHKDVDIWS 124

[Close]

BLAST of ClCG01G013920 vs. NCBI nr
Match: gi|659071883|ref|XP_008462391.1| (PREDICTED: uncharacterized protein At1g08160-like [Cucumis melo])

HSP 1 Score: 292.7 bits (748), Expect = 5.0e-76
Identity = 149/212 (70.28%), Postives = 170/212 (80.19%), Query Frame = 1


Query: 1   MRSTIATTQGVTSS--SAAQRC-YRQQHGTTAKRTKVIRIIGRSLLGVIFLVALAILTCW 60
           MRST    +  +SS   A +R  YRQ+H TT KRT++IRIIGRSLL VI  +++AI+TCW
Sbjct: 1   MRSTTTQEEEASSSIVEAPKRSFYRQRHETT-KRTRIIRIIGRSLLCVIIFLSVAIITCW 60

Query: 61  LVVFPKTPRLMVETGKVTPTGSTHNVLNATIAFSIKTSNPNKRASLHMDSMKMIVNCNMG 120
           LVVFP+TPRLMVET KVT  GST+  LNATI F IK+ NPNK+AS++MDSMKMIV   MG
Sbjct: 61  LVVFPRTPRLMVETSKVTAHGSTNRKLNATIVFYIKSYNPNKKASIYMDSMKMIVKDYMG 120

Query: 121 KPFSSTIPTFILMPQNETILNPVVDVNFIYPFGRPVPSDWIRLELRFLAKISYILNRWTS 180
            PF S IPTF LMP+NET+ N  V VN IYPFGRPV SDWI LELRF AK+SYI+NRW S
Sbjct: 121 LPFHSAIPTFTLMPRNETVFNSTVRVNLIYPFGRPVHSDWIHLELRFSAKVSYIVNRWKS 180

Query: 181 KPRLLEIYCDHLWLKINDSTPNFDNTKCKVDL 210
           KPRLLEIYCDHLWLKINDSTPNFD TKCKVD+
Sbjct: 181 KPRLLEIYCDHLWLKINDSTPNFDRTKCKVDI 211

[Close]

BLAST of ClCG01G013920 vs. NCBI nr
Match: gi|700209767|gb|KGN64863.1| (hypothetical protein Csa_1G132730 [Cucumis sativus])

HSP 1 Score: 291.6 bits (745), Expect = 1.1e-75
Identity = 144/211 (68.25%), Postives = 171/211 (81.04%), Query Frame = 1


Query: 1   MRSTIATTQGVTSS--SAAQRCYRQQHGTTAKRTKVIRIIGRSLLGVIFLVALAILTCWL 60
           MRST    +G +SS   A +R + +Q  TT KRT++IRIIGRSLL VI  +++AI+TCWL
Sbjct: 1   MRSTTTQGEGASSSIIEAPKRSFCRQRETT-KRTRIIRIIGRSLLSVIIFLSVAIITCWL 60

Query: 61  VVFPKTPRLMVETGKVTPTGSTHNVLNATIAFSIKTSNPNKRASLHMDSMKMIVNCNMGK 120
           VVFP+TPRLMVET KVT  GST+  LNATI F IK+ NPNK+AS+HMDS+KMIV+  MG 
Sbjct: 61  VVFPRTPRLMVETSKVTAHGSTNRHLNATIVFYIKSYNPNKKASIHMDSVKMIVSDYMGL 120

Query: 121 PFSSTIPTFILMPQNETILNPVVDVNFIYPFGRPVPSDWIRLELRFLAKISYILNRWTSK 180
           PF STIPTF LMP+NE + N  V VNF+YPFGRPV SDW+ LELRF A++SYI+NRW SK
Sbjct: 121 PFHSTIPTFTLMPRNEMVFNSTVRVNFMYPFGRPVHSDWVHLELRFSAQVSYIVNRWRSK 180

Query: 181 PRLLEIYCDHLWLKINDSTPNFDNTKCKVDL 210
           PRLLEIYCDHLWL+INDSTPNFD TKC+VDL
Sbjct: 181 PRLLEIYCDHLWLRINDSTPNFDKTKCRVDL 210

[Close]

BLAST of ClCG01G013920 vs. NCBI nr
Match: gi|778659281|ref|XP_011654120.1| (PREDICTED: uncharacterized protein LOC105435303 [Cucumis sativus])

HSP 1 Score: 253.1 bits (645), Expect = 4.4e-64
Identity = 128/211 (60.66%), Postives = 156/211 (73.93%), Query Frame = 1


Query: 3   STIATTQGVTSSS----AAQRCYRQQHGTTAKRTKVIRIIGRSLLGVIFLVALAILTCWL 62
           +T  TTQG  SSS    A +R   +QHG  AKRT+VIRIIGRSLL  I L+ +AILTCW 
Sbjct: 6   TTTTTTQGEASSSSIIRAPKRGAYRQHGI-AKRTRVIRIIGRSLLCAIMLLGIAILTCWF 65

Query: 63  VVFPKTPRLMVETGKVTPTGSTHNVLNATIAFSIKTSNPNKRASLHMDSMKMIVNCNMGK 122
           VV P+TP+LMVE+G+VT   ST   LNATI F+I++ NPNKRAS+++DSMKM V   M  
Sbjct: 66  VVIPRTPQLMVESGQVTGYHSTIRKLNATIVFNIRSYNPNKRASIYVDSMKMTVKNYMSV 125

Query: 123 PFSSTIPTFILMPQNETILNPVVDVNFIYPFGRPVPSDWIRLELRFLAKISYILNRWTSK 182
           PF S IP F + P+N T+L P + VN IYPFGRP+ + WI +EL F AK+SYI NRW SK
Sbjct: 126 PFHSDIPNFTMTPRNMTVLTPTILVNCIYPFGRPLHAGWIHIELSFSAKVSYIFNRWASK 185

Query: 183 PRLLEIYCDHLWLKINDSTPNFDNTKCKVDL 210
           PRL+EIYC+H W KI+DS PNFDN KC+VDL
Sbjct: 186 PRLMEIYCNHFWFKIDDSMPNFDNIKCQVDL 215

[Close]

BLAST of ClCG01G013920 vs. NCBI nr
Match: gi|659071878|ref|XP_008462366.1| (PREDICTED: uncharacterized protein LOC103500736 [Cucumis melo])

HSP 1 Score: 251.5 bits (641), Expect = 1.3e-63
Identity = 131/214 (61.21%), Postives = 157/214 (73.36%), Query Frame = 1


Query: 1   MRSTIATT-QGVTSSSAAQRCYRQ----QHGTTAKRTKVIRIIGRSLLGVIFLVALAILT 60
           MRST  TT QG  SSS+  R  ++    QHG  AKRT+VIRIIGRSLL VI L+ +AILT
Sbjct: 1   MRSTTTTTTQGEASSSSIIRAPKRGPYRQHGI-AKRTRVIRIIGRSLLCVIMLLGIAILT 60

Query: 61  CWLVVFPKTPRLMVETGKVTPTGSTHNVLNATIAFSIKTSNPNKRASLHMDSMKMIVNCN 120
           CW VV P+TPRLMVE+GKVT   ST+  LNATI  +I++ NPNKRAS++MDSMKM V  +
Sbjct: 61  CWFVVIPRTPRLMVESGKVTGYHSTNRKLNATIVLNIRSYNPNKRASIYMDSMKMTVKNS 120

Query: 121 MGKPFSSTIPTFILMPQNETILNPVVDVNFIYPFGRPVPSDWIRLELRFLAKISYILNRW 180
           M  PF S IP F + PQN T+LNP + VNFIYPFG P+ + WI +EL F AK+SY+LNRW
Sbjct: 121 MSVPFHSDIPNFTMTPQNVTVLNPTILVNFIYPFGLPLHAGWIHIELSFSAKVSYLLNRW 180

Query: 181 TSKPRLLEIYCDHLWLKINDSTPNFDNTKCKVDL 210
            SKPR +EIYC+H   KI DS PNF N +C VDL
Sbjct: 181 ASKPRWMEIYCNHFRFKIGDSMPNFQNIECLVDL 213

[Close]

BLAST of ClCG01G013920 vs. NCBI nr
Match: gi|659071875|ref|XP_008462348.1| (PREDICTED: protein YLS9-like [Cucumis melo])

HSP 1 Score: 233.4 bits (594), Expect = 3.6e-58
Identity = 128/209 (61.24%), Postives = 155/209 (74.16%), Query Frame = 1


Query: 1   MRSTIATTQGVTSSSAAQRCYRQQHGTTAKRTKVIRIIGRSLLGVIFLVALAILTCWLVV 60
           MRST ATT                HG T KRT++IR++GRSLLGVIFLVAL ++ CWLVV
Sbjct: 1   MRSTTATTT---------------HGIT-KRTRLIRLVGRSLLGVIFLVALGMIICWLVV 60

Query: 61  FPKTPRLMVETGKVTPTGSTHNVLNATIAFSIKTSNPNKRASLHMDSMKMIVNCNMGKPF 120
            PKTPRL+VETGKV    ST ++LNATIAF++K+ NPNKRAS+HMD M+MIV+ NMG  F
Sbjct: 61  IPKTPRLIVETGKVVVHSSTISMLNATIAFTVKSYNPNKRASIHMDYMRMIVD-NMGVRF 120

Query: 121 SSTIPTFILMPQNETILNPVVDVNFIYPFGRPVPSDWIRLELRFLAKISYILNRWTSKPR 180
           SS IP+F L P+N+T+L   V VNF YPFG    ++ I  EL+F A++SY + +W SKPR
Sbjct: 121 SSAIPSFTLTPRNQTVLWSAVQVNFEYPFGY---TEEINPELQFSAEVSYSVEKWMSKPR 180

Query: 181 LLEIYCDHLWLKINDSTPNFDNTKCKVDL 210
           LLEIYC+HL LKINDST  FDNTKCKVDL
Sbjct: 181 LLEIYCNHLLLKINDST-TFDNTKCKVDL 188

The following BLAST results are available for this feature:

BLAST of ClCG01G013920 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LSU5_CUCSA	7.7e-76	68.25	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G132730 PE=4 SV=1	[more]
A0A0A0LV68_CUCSA	3.0e-64	60.66	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G132740 PE=4 SV=1	[more]
A0A0A0LY09_CUCSA	2.8e-57	59.62	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G132760 PE=4 SV=1	[more]
A0A0A0LVK9_CUCSA	1.2e-55	58.37	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G132770 PE=4 SV=1	[more]
A0A0A0LSV0_CUCSA	4.5e-52	55.22	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G134270 PE=4 SV=1	[more]

BLAST of ClCG01G013920 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G11660.1	4.4e-06	25.20	NDR1/HIN1-like 1	[more]

BLAST of ClCG01G013920 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659071883\|ref\|XP_008462391.1\|	5.0e-76	70.28	PREDICTED: uncharacterized protein At1g08160-like [Cucumis melo]	[more]
gi\|700209767\|gb\|KGN64863.1\|	1.1e-75	68.25	hypothetical protein Csa_1G132730 [Cucumis sativus]	[more]
gi\|778659281\|ref\|XP_011654120.1\|	4.4e-64	60.66	PREDICTED: uncharacterized protein LOC105435303 [Cucumis sativus]	[more]
gi\|659071878\|ref\|XP_008462366.1\|	1.3e-63	61.21	PREDICTED: uncharacterized protein LOC103500736 [Cucumis melo]	[more]
gi\|659071875\|ref\|XP_008462348.1\|	3.6e-58	61.24	PREDICTED: protein YLS9-like [Cucumis melo]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0016020	membrane
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG01G013920.1	ClCG01G013920.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR31852	FAMILY NOT NAMED	coord: 30..209 score: 3.1

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
ClCG01G013920	Csa1G132730	Cucumber (Chinese Long) v2	cuwcgB014
ClCG01G013920	MELO3C004856	Melon (DHL92) v3.5.1	mewcgB131
ClCG01G013920	Cla001046	Watermelon (97103) v1	wcgwmB150
ClCG01G013920	Bhi08G000113	Wax gourd	wcgwgoB243
ClCG01G013920	CSPI01G14000	Wild cucumber (PI 183967)	cpiwcgB017
ClCG01G013920	Cucsa.200330	Cucumber (Gy14) v1	cgywcgB371
ClCG01G013920	CmaCh12G008110	Cucurbita maxima (Rimu)	cmawcgB154
ClCG01G013920	CmaCh13G002650	Cucurbita maxima (Rimu)	cmawcgB181
ClCG01G013920	CmoCh13G002720	Cucurbita moschata (Rifu)	cmowcgB172
ClCG01G013920	CmoCh12G008200	Cucurbita moschata (Rifu)	cmowcgB142
ClCG01G013920	Lsi03G000610	Bottle gourd (USVL1VR-Ls)	lsiwcgB230
ClCG01G013920	Cp4.1LG20g07350	Cucurbita pepo (Zucchini)	cpewcgB455
ClCG01G013920	Cp4.1LG07g06710	Cucurbita pepo (Zucchini)	cpewcgB727
ClCG01G013920	CsGy1G013990	Cucumber (Gy14) v2	cgybwcgB014
ClCG01G013920	MELO3C035547.2	Melon (DHL92) v3.6.1	medwcgB127
ClCG01G013920	CsaV3_1G014180	Cucumber (Chinese Long) v3	cucwcgB016

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
ClCG01G013920	Watermelon (97103) v1	wcgwmB156
ClCG01G013920	Silver-seed gourd	carwcgB0160
ClCG01G013920	Watermelon (97103) v2	wcgwmbB089