CsaV3_1G014180 (gene) Cucumber (Chinese Long) v3
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGGAGTACTACTACACAGGGAGAAGGAGCATCATCCTCCATTATTGAGGCACCAAAACGAAGCTTCTGTAGACAACGTGAGACAACAAAACGCACAAGAATCATAAGAATCATAGGAAGAAGTTTGTTGTCTGTAATAATCTTCTTGAGTGTTGCAATTATCACATGTTGGCTTGTTGTTTTCCCCAGAACCCCACGTCTCATGGTGGAAACTAGCAAAGTGACAGCCCATGGTTCAACTAATAGACACCTCAATGCAACCATAGTTTTCTACATCAAAAGCTACAACCCTAACAAAAAAGCCTCCATTCACATGGATTCTGTGAAGATGATAGTCAGTGATTATATGGGGCTACCGTTTCACTCCACCATCCCCACCTTCACGTTGATGCCTCGAAACGAGATGGTCTTCAACTCAACCGTTCGTGTCAACTTCATGTACCCATTTGGGCGCCCGGTGCATTCGGACTGGGTACATCTAGAGCTTCGCTTCTCTGCTCAAGTTAGGTACGTACAAACATGTATGAACATAGAAGTGTTGTTGGTTTTGTTGGTGTAAATTATTTATTTTTATTCTTACTTTAGAATTAGAATTAGTTTTGAAAAACTCTTAAAATTTTAGGAGTATTATTTTTTACACAAAATGGTAACTGTTCTATCATTTTTGAATTCTTTTTGACATATAAGAGTATTTTTTAAACATTTGAAAGTTGAAATATATTTTTTGACATAAGTAAAAAGTTGGAAGAGATATTTTGTATAATTTTGCCTTAATTGCTTTTAGATTTTAATTAAAATTAAACCGATGGATACTACTAATACCAAAATTTGCCTATATCTTTAATAAGTCATGGCTTTGTTTGTATCAGTTACATTGTGAACAGATGGAGGTCGAAACCACGATTGCTGGAGATCTATTGTGATCACCTTTGGCTTAGGATTAATGATTCTACCCCTAATTTTGATAAAACCAAATGCAGAGTGGATCTTTAAAGAGATTTGATCTAGATGTGTTGTTGATCTTGTTTAAGAAGATATGTTATTCATGCTGGTTATATAATTCCAAAAGATTTGTAATTGAAATATTCATTTCCTTTAGGTTTAATTTCTTTCTTTATCAATAGAGTTCTTAATGTTTTATAATGTTTTTTTTTAATGGTTAAAATATCATTTTCATCAATGTACTTTGATAATTG ATGAGGAGTACTACTACACAGGGAGAAGGAGCATCATCCTCCATTATTGAGGCACCAAAACGAAGCTTCTGTAGACAACGTGAGACAACAAAACGCACAAGAATCATAAGAATCATAGGAAGAAGTTTGTTGTCTGTAATAATCTTCTTGAGTGTTGCAATTATCACATGTTGGCTTGTTGTTTTCCCCAGAACCCCACGTCTCATGGTGGAAACTAGCAAAGTGACAGCCCATGGTTCAACTAATAGACACCTCAATGCAACCATAGTTTTCTACATCAAAAGCTACAACCCTAACAAAAAAGCCTCCATTCACATGGATTCTGTGAAGATGATAGTCAGTGATTATATGGGGCTACCGTTTCACTCCACCATCCCCACCTTCACGTTGATGCCTCGAAACGAGATGGTCTTCAACTCAACCGTTCGTGTCAACTTCATGTACCCATTTGGGCGCCCGGTGCATTCGGACTGGGTACATCTAGAGCTTCGCTTCTCTGCTCAAGTTAGTTACATTGTGAACAGATGGAGGTCGAAACCACGATTGCTGGAGATCTATTGTGATCACCTTTGGCTTAGGATTAATGATTCTACCCCTAATTTTGATAAAACCAAATGCAGAGTGGATCTTTAA ATGAGGAGTACTACTACACAGGGAGAAGGAGCATCATCCTCCATTATTGAGGCACCAAAACGAAGCTTCTGTAGACAACGTGAGACAACAAAACGCACAAGAATCATAAGAATCATAGGAAGAAGTTTGTTGTCTGTAATAATCTTCTTGAGTGTTGCAATTATCACATGTTGGCTTGTTGTTTTCCCCAGAACCCCACGTCTCATGGTGGAAACTAGCAAAGTGACAGCCCATGGTTCAACTAATAGACACCTCAATGCAACCATAGTTTTCTACATCAAAAGCTACAACCCTAACAAAAAAGCCTCCATTCACATGGATTCTGTGAAGATGATAGTCAGTGATTATATGGGGCTACCGTTTCACTCCACCATCCCCACCTTCACGTTGATGCCTCGAAACGAGATGGTCTTCAACTCAACCGTTCGTGTCAACTTCATGTACCCATTTGGGCGCCCGGTGCATTCGGACTGGGTACATCTAGAGCTTCGCTTCTCTGCTCAAGTTAGTTACATTGTGAACAGATGGAGGTCGAAACCACGATTGCTGGAGATCTATTGTGATCACCTTTGGCTTAGGATTAATGATTCTACCCCTAATTTTGATAAAACCAAATGCAGAGTGGATCTTTAA MRSTTTQGEGASSSIIEAPKRSFCRQRETTKRTRIIRIIGRSLLSVIIFLSVAIITCWLVVFPRTPRLMVETSKVTAHGSTNRHLNATIVFYIKSYNPNKKASIHMDSVKMIVSDYMGLPFHSTIPTFTLMPRNEMVFNSTVRVNFMYPFGRPVHSDWVHLELRFSAQVSYIVNRWRSKPRLLEIYCDHLWLRINDSTPNFDKTKCRVDL
BLAST of CsaV3_1G014180 vs. NCBI nr
Match: KGN64863.1 (hypothetical protein Csa_1G132730 [Cucumis sativus]) HSP 1 Score: 425.2 bits (1092), Expect = 1.3e-115 Identity = 210/210 (100.00%), Postives = 210/210 (100.00%), Query Frame = 0
BLAST of CsaV3_1G014180 vs. NCBI nr
Match: XP_008462391.1 (PREDICTED: uncharacterized protein At1g08160-like [Cucumis melo]) HSP 1 Score: 362.1 bits (928), Expect = 1.3e-96 Identity = 180/211 (85.31%), Postives = 190/211 (90.05%), Query Frame = 0
BLAST of CsaV3_1G014180 vs. NCBI nr
Match: XP_011648453.1 (PREDICTED: uncharacterized protein LOC105434468 [Cucumis sativus]) HSP 1 Score: 302.4 bits (773), Expect = 1.2e-78 Identity = 142/142 (100.00%), Postives = 142/142 (100.00%), Query Frame = 0
BLAST of CsaV3_1G014180 vs. NCBI nr
Match: XP_011654120.1 (PREDICTED: uncharacterized protein LOC105435303 [Cucumis sativus] >KGN64864.1 hypothetical protein Csa_1G132740 [Cucumis sativus]) HSP 1 Score: 266.5 bits (680), Expect = 7.5e-68 Identity = 124/193 (64.25%), Postives = 152/193 (78.76%), Query Frame = 0
BLAST of CsaV3_1G014180 vs. NCBI nr
Match: XP_023520091.1 (uncharacterized protein At1g08160-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 228.8 bits (582), Expect = 1.7e-56 Identity = 129/216 (59.72%), Postives = 158/216 (73.15%), Query Frame = 0
BLAST of CsaV3_1G014180 vs. TAIR10
Match: AT5G22870.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family) HSP 1 Score: 58.9 bits (141), Expect = 4.3e-09 Identity = 53/194 (27.32%), Postives = 89/194 (45.88%), Query Frame = 0
BLAST of CsaV3_1G014180 vs. TAIR10
Match: AT1G08160.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family) HSP 1 Score: 56.6 bits (135), Expect = 2.1e-08 Identity = 43/163 (26.38%), Postives = 75/163 (46.01%), Query Frame = 0
BLAST of CsaV3_1G014180 vs. TAIR10
Match: AT2G35980.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family) HSP 1 Score: 41.2 bits (95), Expect = 9.3e-04 Identity = 43/191 (22.51%), Postives = 88/191 (46.07%), Query Frame = 0
BLAST of CsaV3_1G014180 vs. Swiss-Prot
Match: sp|Q8VZ13|Y1816_ARATH (Uncharacterized protein At1g08160 OS=Arabidopsis thaliana OX=3702 GN=At1g08160 PE=2 SV=1) HSP 1 Score: 56.6 bits (135), Expect = 3.8e-07 Identity = 43/163 (26.38%), Postives = 75/163 (46.01%), Query Frame = 0
BLAST of CsaV3_1G014180 vs. TrEMBL
Match: tr|A0A0A0LSU5|A0A0A0LSU5_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G132730 PE=4 SV=1) HSP 1 Score: 425.2 bits (1092), Expect = 8.3e-116 Identity = 210/210 (100.00%), Postives = 210/210 (100.00%), Query Frame = 0
BLAST of CsaV3_1G014180 vs. TrEMBL
Match: tr|A0A1S3CGU2|A0A1S3CGU2_CUCME (uncharacterized protein At1g08160-like OS=Cucumis melo OX=3656 GN=LOC103500758 PE=4 SV=1) HSP 1 Score: 362.1 bits (928), Expect = 8.6e-97 Identity = 180/211 (85.31%), Postives = 190/211 (90.05%), Query Frame = 0
BLAST of CsaV3_1G014180 vs. TrEMBL
Match: tr|A0A0A0LV68|A0A0A0LV68_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G132740 PE=4 SV=1) HSP 1 Score: 266.5 bits (680), Expect = 4.9e-68 Identity = 124/193 (64.25%), Postives = 152/193 (78.76%), Query Frame = 0
BLAST of CsaV3_1G014180 vs. TrEMBL
Match: tr|A0A1S3CGV1|A0A1S3CGV1_CUCME (uncharacterized protein LOC103500736 OS=Cucumis melo OX=3656 GN=LOC103500736 PE=4 SV=1) HSP 1 Score: 224.6 bits (571), Expect = 2.2e-55 Identity = 101/163 (61.96%), Postives = 127/163 (77.91%), Query Frame = 0
BLAST of CsaV3_1G014180 vs. TrEMBL
Match: tr|A0A1S3CGS4|A0A1S3CGS4_CUCME (protein YLS9-like OS=Cucumis melo OX=3656 GN=LOC103500718 PE=4 SV=1) HSP 1 Score: 223.4 bits (568), Expect = 4.8e-55 Identity = 114/181 (62.98%), Postives = 142/181 (78.45%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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