Lsi03G000610 (gene) Bottle gourd (USVL1VR-Ls) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Lsi03G000610
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls))
Description	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family, putative
Location	chr03 : 903166 .. 904669 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AACAATGAGAAGCATTACTACACAAGGAGAAGCATCATCATCATCGTCATCATCAAAACAAAGCTCCTATAGGCAACAACAATATGGGACGACAGCAAAACGTACGAAACTCATAAGAATCATAGGAAGAAGCTTGTTGTGTGTAATATTCCTTGTTGGTCTTGCAATTGTCATATGTTGGTTTGTTGTCTTTCCCAGAACCCCACGTCTTATGGTGGAAACTGGCAAAGTCACAGCCCATAATTCAACTAATAGAAAGCTCAATGCCACCATAATTTTCTCTATCAAAAGCTATAACCCTAACAAAAGAGCTTCCCTTCAAATGGATTCTATGGAGATGATAGTCCATGACTATATGGGCCGACCCTTTCACTCGCTCGCCATCCCCACCTTCACGTTGATGCCCCGAAACGAGACCCGCTTGACCTCCATCGTCCATGTCAACTCCATATACCCATTTGGGCGCTCGGTGAATTCGGACTGGATACATCTAGAGCTTGGCTTCTCAGCTAAAATCAGGTATATATATAAAACATAAAAATGTTGTTAAGTTGTTTTGGGAGATTATTATAAACTGAAAAAGTATCAAACTATTTACAAATTATATAGAAAAGTTTCACAGTCTATTAGTGATAGATCGTGATAGAATTCTATCGCGGTCTATTGCTAGAAATAGTGAAATTTTTCTATATTTGTAAATAATTTGACTCATTTTTCTATATTTTAAAACAGCTCTTAAGTTTTGTTGATATTAAAATCTTTATTTTTACTTTAAAATTATATTTTGGCTGGGAATTCAAAGAATAAATTTGTTGGATTTACCTCAATTATTAACATGATAACCTATTTAATTTCATTTTTTGTTTTTAGATTTTGAAAATTAAGCTTATAGATAAAATAAATTTCTTTCTTTTGTTATCTCTTCTTTTTAAGAGCTTTTTTTCAAAATCTAAGCCGAATTTTTTGTCTCTATAAAAATTTATGGCTTTGTTCGTATCAGTTACATTTTCAACAGATGGACGTCGAAACTTCGGTTGCTCGAGATCTATTGTGATCACCTTTGGCTTAAGATCGGTGATTCTACACCTAATTTTGATAATACCAAATGCAAAGTGGATATTTGAGAGACTTGATATAGGTGTGTGTTATTCTTGCTTAATAAGATGTGTTATTCTTGCTGAATAATTCCAAAAGATTTGTAACTGAAAGTTTAATTTTTCTTTAGTTTAATTGTTTCTTTATGAATACAGAGTTCTTACAATTTTTTTTTTTTTTTTAGAATAATGAAGAAGAATGGCATTGAAAGATTTTAGAGAAATTTGCTTTGGGGAGAGCTGGCAGAAAGGAAAAAAAATGATGTGAAATTACAAATTATATAATCTATTGTAGTTTATGAAGAAAAATGAAAAAAATAATTGTGAGCTTGTTTAAGAAGAAAGGGCAAAGAAAAGTCATTTTTTAATTAAGAAAATATATATAAAGAAAAGAATAATTCTTTCTTCAA

mRNA sequence

AACAATGAGAAGCATTACTACACAAGGAGAAGCATCATCATCATCGTCATCATCAAAACAAAGCTCCTATAGGCAACAACAATATGGGACGACAGCAAAACGTACGAAACTCATAAGAATCATAGGAAGAAGCTTGTTGTGTGTAATATTCCTTGTTGGTCTTGCAATTGTCATATGTTGGTTTGTTGTCTTTCCCAGAACCCCACGTCTTATGGTGGAAACTGGCAAAGTCACAGCCCATAATTCAACTAATAGAAAGCTCAATGCCACCATAATTTTCTCTATCAAAAGCTATAACCCTAACAAAAGAGCTTCCCTTCAAATGGATTCTATGGAGATGATAGTCCATGACTATATGGGCCGACCCTTTCACTCGCTCGCCATCCCCACCTTCACGTTGATGCCCCGAAACGAGACCCGCTTGACCTCCATCGTCCATGTCAACTCCATATACCCATTTGGGCGCTCGAATAATGAAGAAGAATGGCATTGAAAGATTTTAGAGAAATTTGCTTTGGGGAGAGCTGGCAGAAAGGAAAAAAAATGATGTGAAATTACAAATTATATAATCTATTGTAGTTTATGAAGAAAAATGAAAAAAATAATTGTGAGCTTGTTTAAGAAGAAAGGGCAAAGAAAAGTCATTTTTTAATTAAGAAAATATATATAAAGAAAAGAATAATTCTTTCTTCAA

Coding sequence (CDS)

ATGAGAAGCATTACTACACAAGGAGAAGCATCATCATCATCGTCATCATCAAAACAAAGCTCCTATAGGCAACAACAATATGGGACGACAGCAAAACGTACGAAACTCATAAGAATCATAGGAAGAAGCTTGTTGTGTGTAATATTCCTTGTTGGTCTTGCAATTGTCATATGTTGGTTTGTTGTCTTTCCCAGAACCCCACGTCTTATGGTGGAAACTGGCAAAGTCACAGCCCATAATTCAACTAATAGAAAGCTCAATGCCACCATAATTTTCTCTATCAAAAGCTATAACCCTAACAAAAGAGCTTCCCTTCAAATGGATTCTATGGAGATGATAGTCCATGACTATATGGGCCGACCCTTTCACTCGCTCGCCATCCCCACCTTCACGTTGATGCCCCGAAACGAGACCCGCTTGACCTCCATCGTCCATGTCAACTCCATATACCCATTTGGGCGCTCGAATAATGAAGAAGAATGGCATTGA

Protein sequence

MRSITTQGEASSSSSSSKQSSYRQQQYGTTAKRTKLIRIIGRSLLCVIFLVGLAIVICWFVVFPRTPRLMVETGKVTAHNSTNRKLNATIIFSIKSYNPNKRASLQMDSMEMIVHDYMGRPFHSLAIPTFTLMPRNETRLTSIVHVNSIYPFGRSNNEEEWH

Homology

[Close]

BLAST of Lsi03G000610 vs. TrEMBL
Match: A0A0A0LSU5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G132730 PE=4 SV=1)

HSP 1 Score: 188.7 bits (478), Expect = 5.4e-45
Identity = 107/164 (65.24%), Postives = 125/164 (76.22%), Query Frame = 1


Query: 1   MRSITTQGEASSSS--SSSKQSSYRQQQYGTTAKRTKLIRIIGRSLLCVIFLVGLAIVIC 60
           MRS TTQGE +SSS   + K+S  RQ++   T KRT++IRIIGRSLL VI  + +AI+ C
Sbjct: 1   MRSTTTQGEGASSSIIEAPKRSFCRQRE---TTKRTRIIRIIGRSLLSVIIFLSVAIITC 60

Query: 61  WFVVFPRTPRLMVETGKVTAHNSTNRKLNATIIFSIKSYNPNKRASLQMDSMEMIVHDYM 120
           W VVFPRTPRLMVET KVTAH STNR LNATI+F IKSYNPNK+AS+ MDS++MIV DYM
Sbjct: 61  WLVVFPRTPRLMVETSKVTAHGSTNRHLNATIVFYIKSYNPNKKASIHMDSVKMIVSDYM 120

Query: 121 GRPFHSLAIPTFTLMPRNETRLTSIVHVNSIYPFGRSNNEEEWH 163
           G PFHS  IPTFTLMPRNE    S V VN +YPFGR  + +  H
Sbjct: 121 GLPFHS-TIPTFTLMPRNEMVFNSTVRVNFMYPFGRPVHSDWVH 160

[Close]

BLAST of Lsi03G000610 vs. TrEMBL
Match: A0A0A0LV68_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G132740 PE=4 SV=1)

HSP 1 Score: 175.3 bits (443), Expect = 6.2e-41
Identity = 98/152 (64.47%), Postives = 120/152 (78.95%), Query Frame = 1


Query: 5   TTQGEASSSS--SSSKQSSYRQQQYGTTAKRTKLIRIIGRSLLCVIFLVGLAIVICWFVV 64
           TTQGEASSSS   + K+ +YRQ      AKRT++IRIIGRSLLC I L+G+AI+ CWFVV
Sbjct: 10  TTQGEASSSSIIRAPKRGAYRQHGI---AKRTRVIRIIGRSLLCAIMLLGIAILTCWFVV 69

Query: 65  FPRTPRLMVETGKVTAHNSTNRKLNATIIFSIKSYNPNKRASLQMDSMEMIVHDYMGRPF 124
            PRTP+LMVE+G+VT ++ST RKLNATI+F+I+SYNPNKRAS+ +DSM+M V +YM  PF
Sbjct: 70  IPRTPQLMVESGQVTGYHSTIRKLNATIVFNIRSYNPNKRASIYVDSMKMTVKNYMSVPF 129

Query: 125 HSLAIPTFTLMPRNETRLTSIVHVNSIYPFGR 155
           HS  IP FT+ PRN T LT  + VN IYPFGR
Sbjct: 130 HS-DIPNFTMTPRNMTVLTPTILVNCIYPFGR 157

[Close]

BLAST of Lsi03G000610 vs. TrEMBL
Match: A0A0A0LVK9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G132770 PE=4 SV=1)

HSP 1 Score: 154.5 bits (389), Expect = 1.1e-34
Identity = 93/154 (60.39%), Postives = 112/154 (72.73%), Query Frame = 1


Query: 1   MRSITT-QGEASSSSSSSKQSSYRQQQYGTTAKRTKLIRIIGRSLLCVIFLVGLAIVICW 60
           MRS TT +GEASSS  SSK  +        T K+T++IRIIGRSLL VIFLVGLA+VICW
Sbjct: 1   MRSSTTAKGEASSSKKSSKGQN-------ETTKKTRIIRIIGRSLLSVIFLVGLAMVICW 60

Query: 61  FVVFPRTPRLMVETGKVTAHNSTNRKLNATIIFSIKSYNPNKRASLQMDSMEMIVHDYMG 120
            VVFP+ PR+ VETG+V AHNST+  LNATI+F++K YNPNKRAS+ + SM MIV   MG
Sbjct: 61  LVVFPKNPRIFVETGRVIAHNSTHNMLNATIVFTVKCYNPNKRASVHLHSMRMIVTS-MG 120

Query: 121 RPFHSLAIPTFTLMPRNETRLTSIVHVNSIYPFG 154
           + F S+ IPTF   P N+T L+  V VN  YPFG
Sbjct: 121 QAFSSV-IPTFMQTPGNQTVLSPAVEVNFDYPFG 145

[Close]

BLAST of Lsi03G000610 vs. TrEMBL
Match: A0A0A0LY09_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G132760 PE=4 SV=1)

HSP 1 Score: 151.0 bits (380), Expect = 1.3e-33
Identity = 82/122 (67.21%), Postives = 97/122 (79.51%), Query Frame = 1


Query: 32  KRTKLIRIIGRSLLCVIFLVGLAIVICWFVVFPRTPRLMVETGKVTAHNSTNRKLNATII 91
           KRT+LIR++GRSLL VIFLV L ++ICW VV P++PRL+VETGKV AH+ST   LNATI 
Sbjct: 14  KRTRLIRVLGRSLLGVIFLVALGMIICWLVVIPKSPRLIVETGKVIAHSSTISMLNATIA 73

Query: 92  FSIKSYNPNKRASLQMDSMEMIVHDYMGRPFHSLAIPTFTLMPRNETRLTSIVHVNSIYP 151
           F++KSYNPNKRAS+ MD M MIV D MG  F S AIP+FTL PRN+T L+S V VN  YP
Sbjct: 74  FTVKSYNPNKRASIHMDYMRMIV-DNMGVRFSS-AIPSFTLTPRNQTVLSSAVQVNFEYP 133

Query: 152 FG 154
           FG
Sbjct: 134 FG 133

[Close]

BLAST of Lsi03G000610 vs. TrEMBL
Match: A0A0A0LSV0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G134270 PE=4 SV=1)

HSP 1 Score: 141.4 bits (355), Expect = 1.0e-30
Identity = 86/155 (55.48%), Postives = 112/155 (72.26%), Query Frame = 1


Query: 1   MRSITTQGEASS--SSSSSKQSSYRQQQYGTTAKRTKLIRIIGRSLLCVIFLVGLAIVIC 60
           MRS    GE     SSSSSK+ SY  +    TAKRT+++RI GR+LL ++ LV +A++IC
Sbjct: 1   MRSNGKAGEPPPPPSSSSSKEMSYVIKH--GTAKRTRVLRITGRTLLGLMILVAIAMIIC 60

Query: 61  WFVVFPRTPRLMVETGKVTAHNSTNRKLNATIIFSIKSYNPNKRASLQMDSMEMIVHDYM 120
           W +VFPR P ++VETG+V  H+ T+RKLNATI F++ SYNPNK+AS++MDSM MIV D M
Sbjct: 61  WLIVFPRNPDIIVETGQVIPHSLTDRKLNATIAFTVTSYNPNKKASIRMDSMRMIVSD-M 120

Query: 121 GRPFHSLAIPTFTLMPRNETRLTSIVHVNSIYPFG 154
           G  F S  IP+FT  P+N+T LTS +  N IYPFG
Sbjct: 121 GLSFWS-DIPSFTQPPKNKTVLTSTIQGNFIYPFG 151

[Close]

BLAST of Lsi03G000610 vs. NCBI nr
Match: gi|659071883|ref|XP_008462391.1| (PREDICTED: uncharacterized protein At1g08160-like [Cucumis melo])

HSP 1 Score: 200.3 bits (508), Expect = 2.6e-48
Identity = 113/164 (68.90%), Postives = 128/164 (78.05%), Query Frame = 1


Query: 1   MRSITTQGEASSSS--SSSKQSSYRQQQYGTTAKRTKLIRIIGRSLLCVIFLVGLAIVIC 60
           MRS TTQ E +SSS   + K+S YRQ+    T KRT++IRIIGRSLLCVI  + +AI+ C
Sbjct: 1   MRSTTTQEEEASSSIVEAPKRSFYRQRH--ETTKRTRIIRIIGRSLLCVIIFLSVAIITC 60

Query: 61  WFVVFPRTPRLMVETGKVTAHNSTNRKLNATIIFSIKSYNPNKRASLQMDSMEMIVHDYM 120
           W VVFPRTPRLMVET KVTAH STNRKLNATI+F IKSYNPNK+AS+ MDSM+MIV DYM
Sbjct: 61  WLVVFPRTPRLMVETSKVTAHGSTNRKLNATIVFYIKSYNPNKKASIYMDSMKMIVKDYM 120

Query: 121 GRPFHSLAIPTFTLMPRNETRLTSIVHVNSIYPFGRSNNEEEWH 163
           G PFHS AIPTFTLMPRNET   S V VN IYPFGR  + +  H
Sbjct: 121 GLPFHS-AIPTFTLMPRNETVFNSTVRVNLIYPFGRPVHSDWIH 161

[Close]

BLAST of Lsi03G000610 vs. NCBI nr
Match: gi|700209767|gb|KGN64863.1| (hypothetical protein Csa_1G132730 [Cucumis sativus])

HSP 1 Score: 188.7 bits (478), Expect = 7.8e-45
Identity = 107/164 (65.24%), Postives = 125/164 (76.22%), Query Frame = 1


Query: 1   MRSITTQGEASSSS--SSSKQSSYRQQQYGTTAKRTKLIRIIGRSLLCVIFLVGLAIVIC 60
           MRS TTQGE +SSS   + K+S  RQ++   T KRT++IRIIGRSLL VI  + +AI+ C
Sbjct: 1   MRSTTTQGEGASSSIIEAPKRSFCRQRE---TTKRTRIIRIIGRSLLSVIIFLSVAIITC 60

Query: 61  WFVVFPRTPRLMVETGKVTAHNSTNRKLNATIIFSIKSYNPNKRASLQMDSMEMIVHDYM 120
           W VVFPRTPRLMVET KVTAH STNR LNATI+F IKSYNPNK+AS+ MDS++MIV DYM
Sbjct: 61  WLVVFPRTPRLMVETSKVTAHGSTNRHLNATIVFYIKSYNPNKKASIHMDSVKMIVSDYM 120

Query: 121 GRPFHSLAIPTFTLMPRNETRLTSIVHVNSIYPFGRSNNEEEWH 163
           G PFHS  IPTFTLMPRNE    S V VN +YPFGR  + +  H
Sbjct: 121 GLPFHS-TIPTFTLMPRNEMVFNSTVRVNFMYPFGRPVHSDWVH 160

[Close]

BLAST of Lsi03G000610 vs. NCBI nr
Match: gi|778659281|ref|XP_011654120.1| (PREDICTED: uncharacterized protein LOC105435303 [Cucumis sativus])

HSP 1 Score: 175.3 bits (443), Expect = 8.9e-41
Identity = 98/152 (64.47%), Postives = 120/152 (78.95%), Query Frame = 1


Query: 5   TTQGEASSSS--SSSKQSSYRQQQYGTTAKRTKLIRIIGRSLLCVIFLVGLAIVICWFVV 64
           TTQGEASSSS   + K+ +YRQ      AKRT++IRIIGRSLLC I L+G+AI+ CWFVV
Sbjct: 10  TTQGEASSSSIIRAPKRGAYRQHGI---AKRTRVIRIIGRSLLCAIMLLGIAILTCWFVV 69

Query: 65  FPRTPRLMVETGKVTAHNSTNRKLNATIIFSIKSYNPNKRASLQMDSMEMIVHDYMGRPF 124
            PRTP+LMVE+G+VT ++ST RKLNATI+F+I+SYNPNKRAS+ +DSM+M V +YM  PF
Sbjct: 70  IPRTPQLMVESGQVTGYHSTIRKLNATIVFNIRSYNPNKRASIYVDSMKMTVKNYMSVPF 129

Query: 125 HSLAIPTFTLMPRNETRLTSIVHVNSIYPFGR 155
           HS  IP FT+ PRN T LT  + VN IYPFGR
Sbjct: 130 HS-DIPNFTMTPRNMTVLTPTILVNCIYPFGR 157

[Close]

BLAST of Lsi03G000610 vs. NCBI nr
Match: gi|659071878|ref|XP_008462366.1| (PREDICTED: uncharacterized protein LOC103500736 [Cucumis melo])

HSP 1 Score: 172.6 bits (436), Expect = 5.8e-40
Identity = 98/151 (64.90%), Postives = 117/151 (77.48%), Query Frame = 1


Query: 5   TTQGEASSSS--SSSKQSSYRQQQYGTTAKRTKLIRIIGRSLLCVIFLVGLAIVICWFVV 64
           TTQGEASSSS   + K+  YRQ      AKRT++IRIIGRSLLCVI L+G+AI+ CWFVV
Sbjct: 8   TTQGEASSSSIIRAPKRGPYRQHGI---AKRTRVIRIIGRSLLCVIMLLGIAILTCWFVV 67

Query: 65  FPRTPRLMVETGKVTAHNSTNRKLNATIIFSIKSYNPNKRASLQMDSMEMIVHDYMGRPF 124
            PRTPRLMVE+GKVT ++STNRKLNATI+ +I+SYNPNKRAS+ MDSM+M V + M  PF
Sbjct: 68  IPRTPRLMVESGKVTGYHSTNRKLNATIVLNIRSYNPNKRASIYMDSMKMTVKNSMSVPF 127

Query: 125 HSLAIPTFTLMPRNETRLTSIVHVNSIYPFG 154
           HS  IP FT+ P+N T L   + VN IYPFG
Sbjct: 128 HS-DIPNFTMTPQNVTVLNPTILVNFIYPFG 154

[Close]

BLAST of Lsi03G000610 vs. NCBI nr
Match: gi|778664980|ref|XP_011648454.1| (PREDICTED: uncharacterized protein LOC105434469 [Cucumis sativus])

HSP 1 Score: 154.5 bits (389), Expect = 1.6e-34
Identity = 93/154 (60.39%), Postives = 112/154 (72.73%), Query Frame = 1


Query: 1   MRSITT-QGEASSSSSSSKQSSYRQQQYGTTAKRTKLIRIIGRSLLCVIFLVGLAIVICW 60
           MRS TT +GEASSS  SSK  +        T K+T++IRIIGRSLL VIFLVGLA+VICW
Sbjct: 1   MRSSTTAKGEASSSKKSSKGQN-------ETTKKTRIIRIIGRSLLSVIFLVGLAMVICW 60

Query: 61  FVVFPRTPRLMVETGKVTAHNSTNRKLNATIIFSIKSYNPNKRASLQMDSMEMIVHDYMG 120
            VVFP+ PR+ VETG+V AHNST+  LNATI+F++K YNPNKRAS+ + SM MIV   MG
Sbjct: 61  LVVFPKNPRIFVETGRVIAHNSTHNMLNATIVFTVKCYNPNKRASVHLHSMRMIVTS-MG 120

Query: 121 RPFHSLAIPTFTLMPRNETRLTSIVHVNSIYPFG 154
           + F S+ IPTF   P N+T L+  V VN  YPFG
Sbjct: 121 QAFSSV-IPTFMQTPGNQTVLSPAVEVNFDYPFG 145

The following BLAST results are available for this feature:

BLAST of Lsi03G000610 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Lsi03G000610 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LSU5_CUCSA	5.4e-45	65.24	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G132730 PE=4 SV=1	[more]
A0A0A0LV68_CUCSA	6.2e-41	64.47	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G132740 PE=4 SV=1	[more]
A0A0A0LVK9_CUCSA	1.1e-34	60.39	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G132770 PE=4 SV=1	[more]
A0A0A0LY09_CUCSA	1.3e-33	67.21	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G132760 PE=4 SV=1	[more]
A0A0A0LSV0_CUCSA	1.0e-30	55.48	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G134270 PE=4 SV=1	[more]

BLAST of Lsi03G000610 vs. TAIR10


Match Name	E-value	Identity	Description

BLAST of Lsi03G000610 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659071883\|ref\|XP_008462391.1\|	2.6e-48	68.90	PREDICTED: uncharacterized protein At1g08160-like [Cucumis melo]	[more]
gi\|700209767\|gb\|KGN64863.1\|	7.8e-45	65.24	hypothetical protein Csa_1G132730 [Cucumis sativus]	[more]
gi\|778659281\|ref\|XP_011654120.1\|	8.9e-41	64.47	PREDICTED: uncharacterized protein LOC105435303 [Cucumis sativus]	[more]
gi\|659071878\|ref\|XP_008462366.1\|	5.8e-40	64.90	PREDICTED: uncharacterized protein LOC103500736 [Cucumis melo]	[more]
gi\|778664980\|ref\|XP_011648454.1\|	1.6e-34	60.39	PREDICTED: uncharacterized protein LOC105434469 [Cucumis sativus]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi03G000610.1	Lsi03G000610.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR31852	FAMILY NOT NAMED	coord: 32..140 score: 8.4

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Lsi03G000610	Csa1G132730	Cucumber (Chinese Long) v2	culsiB044
Lsi03G000610	CSPI01G14000	Wild cucumber (PI 183967)	cpilsiB046
Lsi03G000610	CmaCh12G008110	Cucurbita maxima (Rimu)	cmalsiB168
Lsi03G000610	CmoCh12G008200	Cucurbita moschata (Rifu)	cmolsiB158
Lsi03G000610	Cla001046	Watermelon (97103) v1	lsiwmB262
Lsi03G000610	MELO3C004856	Melon (DHL92) v3.5.1	lsimeB244
Lsi03G000610	ClCG01G013920	Watermelon (Charleston Gray)	lsiwcgB230
Lsi03G000610	MELO3C035547.2	Melon (DHL92) v3.6.1	lsimedB255
Lsi03G000610	Bhi08G000113	Wax gourd	lsiwgoB337
Lsi03G000610	Cp4.1LG07g06710	Cucurbita pepo (Zucchini)	cpelsiB669
Lsi03G000610	Cp4.1LG20g07350	Cucurbita pepo (Zucchini)	cpelsiB429
Lsi03G000610	CsGy1G013990	Cucumber (Gy14) v2	cgyblsiB041
Lsi03G000610	CsaV3_1G014180	Cucumber (Chinese Long) v3	cuclsiB048

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Lsi03G000610	Silver-seed gourd	carlsiB149
Lsi03G000610	Watermelon (97103) v2	lsiwmbB216
Lsi03G000610	Cucumber (Gy14) v1	cgylsiB343
Lsi03G000610	Cucurbita maxima (Rimu)	cmalsiB212
Lsi03G000610	Cucurbita moschata (Rifu)	cmolsiB203
Lsi03G000610	Watermelon (97103) v1	lsiwmB263