Csa1G132730 (gene) Cucumber (Chinese Long) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Csa1G132730
Type	gene
Organism	Cucumis. sativus (Cucumber (Chinese Long) v2)
Description	Gb\|AAF18257.1; contains IPR004864 (Late embryogenesis abundant protein, LEA-14)
Location	Chr1 : 9469818 .. 9470812 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGGAGTACTACTACACAGGGAGAAGGAGCATCATCCTCCATTATTGAGGCACCAAAACGAAGCTTCTGTAGACAACGTGAGACAACAAAACGCACAAGAATCATAAGAATCATAGGAAGAAGTTTGTTGTCTGTAATAATCTTCTTGAGTGTTGCAATTATCACATGTTGGCTTGTTGTTTTCCCCAGAACCCCACGTCTCATGGTGGAAACTAGCAAAGTGACAGCCCATGGTTCAACTAATAGACACCTCAATGCAACCATAGTTTTCTACATCAAAAGCTACAACCCTAACAAAAAAGCCTCCATTCACATGGATTCTGTGAAGATGATAGTCAGTGATTATATGGGGCTACCGTTTCACTCCACCATCCCCACCTTCACGTTGATGCCTCGAAACGAGATGGTCTTCAACTCAACCGTTCGTGTCAACTTCATGTACCCATTTGGGCGCCCGGTGCATTCGGACTGGGTACATCTAGAGCTTCGCTTCTCTGCTCAAGTTAGGTACGTACAAACATGTATGAACATAGAAGTGTTGTTGGTTTTGTTGGTGTAAATTATTTATTTTTATTCTTACTTTAGAATTAGAATTAGTTTTGAAAAACTCTTAAAATTTTAGGAGTATTATTTTTTACACAAAATGGTAACTGTTCTATCATTTTTGAATTCTTTTTGACATATAAGAGTATTTTTTAAACATTTGAAAGTTGAAATATATTTTTTGACATAAGTAAAAAGTTGGAAGAGATATTTTGTATAATTTTGCCTTAATTGCTTTTAGATTTTAATTAAAATTAAACCGATGGATACTACTAATACCAAAATTTGCCTATATCTTTAATAAGTCATGGCTTTGTTTGTATCAGTTACATTGTGAACAGATGGAGGTCGAAACCACGATTGCTGGAGATCTATTGTGATCACCTTTGGCTTAGGATTAATGATTCTACCCCTAATTTTGATAAAACCAAATGCAGAGTGGATCTTTAA

mRNA sequence

ATGAGGAGTACTACTACACAGGGAGAAGGAGCATCATCCTCCATTATTGAGGCACCAAAACGAAGCTTCTGTAGACAACGTGAGACAACAAAACGCACAAGAATCATAAGAATCATAGGAAGAAGTTTGTTGTCTGTAATAATCTTCTTGAGTGTTGCAATTATCACATGTTGGCTTGTTGTTTTCCCCAGAACCCCACGTCTCATGGTGGAAACTAGCAAAGTGACAGCCCATGGTTCAACTAATAGACACCTCAATGCAACCATAGTTTTCTACATCAAAAGCTACAACCCTAACAAAAAAGCCTCCATTCACATGGATTCTGTGAAGATGATAGTCAGTGATTATATGGGGCTACCGTTTCACTCCACCATCCCCACCTTCACGTTGATGCCTCGAAACGAGATGGTCTTCAACTCAACCGTTCGTGTCAACTTCATGTACCCATTTGGGCGCCCGGTGCATTCGGACTGGGTACATCTAGAGCTTCGCTTCTCTGCTCAAGTTAGTTACATTGTGAACAGATGGAGGTCGAAACCACGATTGCTGGAGATCTATTGTGATCACCTTTGGCTTAGGATTAATGATTCTACCCCTAATTTTGATAAAACCAAATGCAGAGTGGATCTTTAA

Coding sequence (CDS)

ATGAGGAGTACTACTACACAGGGAGAAGGAGCATCATCCTCCATTATTGAGGCACCAAAACGAAGCTTCTGTAGACAACGTGAGACAACAAAACGCACAAGAATCATAAGAATCATAGGAAGAAGTTTGTTGTCTGTAATAATCTTCTTGAGTGTTGCAATTATCACATGTTGGCTTGTTGTTTTCCCCAGAACCCCACGTCTCATGGTGGAAACTAGCAAAGTGACAGCCCATGGTTCAACTAATAGACACCTCAATGCAACCATAGTTTTCTACATCAAAAGCTACAACCCTAACAAAAAAGCCTCCATTCACATGGATTCTGTGAAGATGATAGTCAGTGATTATATGGGGCTACCGTTTCACTCCACCATCCCCACCTTCACGTTGATGCCTCGAAACGAGATGGTCTTCAACTCAACCGTTCGTGTCAACTTCATGTACCCATTTGGGCGCCCGGTGCATTCGGACTGGGTACATCTAGAGCTTCGCTTCTCTGCTCAAGTTAGTTACATTGTGAACAGATGGAGGTCGAAACCACGATTGCTGGAGATCTATTGTGATCACCTTTGGCTTAGGATTAATGATTCTACCCCTAATTTTGATAAAACCAAATGCAGAGTGGATCTTTAA

Protein sequence

MRSTTTQGEGASSSIIEAPKRSFCRQRETTKRTRIIRIIGRSLLSVIIFLSVAIITCWLVVFPRTPRLMVETSKVTAHGSTNRHLNATIVFYIKSYNPNKKASIHMDSVKMIVSDYMGLPFHSTIPTFTLMPRNEMVFNSTVRVNFMYPFGRPVHSDWVHLELRFSAQVSYIVNRWRSKPRLLEIYCDHLWLRINDSTPNFDKTKCRVDL*

Homology

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BLAST of Csa1G132730 vs. Swiss-Prot
Match: Y1816_ARATH (Uncharacterized protein At1g08160 OS=Arabidopsis thaliana GN=At1g08160 PE=2 SV=1)

HSP 1 Score: 59.3 bits (142), Expect = 5.8e-08
Identity = 46/179 (25.70%), Postives = 84/179 (46.93%), Query Frame = 1


Query: 42  SLLSVIIFLSVAIITCWLVVFPRTPRLMVETSKVT--AHGSTNRHLNATIVFYIKSYNPN 101
           +L+ + + + +AI+  +L + P+     VE + V   A G+ + H+NA   + IKSYNP 
Sbjct: 43  ALVLLGLLVGLAILITYLTLRPKRLIYTVEAASVQEFAIGNNDDHINAKFSYVIKSYNPE 102

Query: 102 KKASIHMDSVKMIVSDYMGLPFHSTIPTFTLMPRNE------MVFNSTVRVNFMYPFGRP 161
           K  S+   S+++  + +     H  I  F   P+NE      +V ++     F     R 
Sbjct: 103 KHVSVRYHSMRISTAHHNQSVAHKNISPFKQRPKNETRIETQLVSHNVALSKFNARDLRA 162

Query: 162 VHS-DWVHLELRFSAQVSYIVNRWRSKPRLLEIYCDHLWLRINDST-PNFDKTKCRVDL 211
             S   + +E+  +A+VSY    +RS+ R L+  C  + + +  S+   F +  C+  L
Sbjct: 163 EKSKGTIEMEVYITARVSYKTWIFRSRRRTLKAVCTPVMINVTSSSLDGFQRVLCKTRL 221

[Close]

BLAST of Csa1G132730 vs. TrEMBL
Match: A0A0A0LSU5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G132730 PE=4 SV=1)

HSP 1 Score: 428.7 bits (1101), Expect = 4.1e-117
Identity = 210/210 (100.00%), Postives = 210/210 (100.00%), Query Frame = 1


Query: 1   MRSTTTQGEGASSSIIEAPKRSFCRQRETTKRTRIIRIIGRSLLSVIIFLSVAIITCWLV 60
           MRSTTTQGEGASSSIIEAPKRSFCRQRETTKRTRIIRIIGRSLLSVIIFLSVAIITCWLV
Sbjct: 1   MRSTTTQGEGASSSIIEAPKRSFCRQRETTKRTRIIRIIGRSLLSVIIFLSVAIITCWLV 60

Query: 61  VFPRTPRLMVETSKVTAHGSTNRHLNATIVFYIKSYNPNKKASIHMDSVKMIVSDYMGLP 120
           VFPRTPRLMVETSKVTAHGSTNRHLNATIVFYIKSYNPNKKASIHMDSVKMIVSDYMGLP
Sbjct: 61  VFPRTPRLMVETSKVTAHGSTNRHLNATIVFYIKSYNPNKKASIHMDSVKMIVSDYMGLP 120

Query: 121 FHSTIPTFTLMPRNEMVFNSTVRVNFMYPFGRPVHSDWVHLELRFSAQVSYIVNRWRSKP 180
           FHSTIPTFTLMPRNEMVFNSTVRVNFMYPFGRPVHSDWVHLELRFSAQVSYIVNRWRSKP
Sbjct: 121 FHSTIPTFTLMPRNEMVFNSTVRVNFMYPFGRPVHSDWVHLELRFSAQVSYIVNRWRSKP 180

Query: 181 RLLEIYCDHLWLRINDSTPNFDKTKCRVDL 211
           RLLEIYCDHLWLRINDSTPNFDKTKCRVDL
Sbjct: 181 RLLEIYCDHLWLRINDSTPNFDKTKCRVDL 210

[Close]

BLAST of Csa1G132730 vs. TrEMBL
Match: A0A0A0LV68_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G132740 PE=4 SV=1)

HSP 1 Score: 289.3 bits (739), Expect = 3.9e-75
Identity = 135/208 (64.90%), Postives = 165/208 (79.33%), Query Frame = 1


Query: 3   STTTQGEGASSSIIEAPKRSFCRQRETTKRTRIIRIIGRSLLSVIIFLSVAIITCWLVVF 62
           +TTTQGE +SSSII APKR   RQ    KRTR+IRIIGRSLL  I+ L +AI+TCW VV 
Sbjct: 8   TTTTQGEASSSSIIRAPKRGAYRQHGIAKRTRVIRIIGRSLLCAIMLLGIAILTCWFVVI 67

Query: 63  PRTPRLMVETSKVTAHGSTNRHLNATIVFYIKSYNPNKKASIHMDSVKMIVSDYMGLPFH 122
           PRTP+LMVE+ +VT + ST R LNATIVF I+SYNPNK+ASI++DS+KM V +YM +PFH
Sbjct: 68  PRTPQLMVESGQVTGYHSTIRKLNATIVFNIRSYNPNKRASIYVDSMKMTVKNYMSVPFH 127

Query: 123 STIPTFTLMPRNEMVFNSTVRVNFMYPFGRPVHSDWVHLELRFSAQVSYIVNRWRSKPRL 182
           S IP FT+ PRN  V   T+ VN +YPFGRP+H+ W+H+EL FSA+VSYI NRW SKPRL
Sbjct: 128 SDIPNFTMTPRNMTVLTPTILVNCIYPFGRPLHAGWIHIELSFSAKVSYIFNRWASKPRL 187

Query: 183 LEIYCDHLWLRINDSTPNFDKTKCRVDL 211
           +EIYC+H W +I+DS PNFD  KC+VDL
Sbjct: 188 MEIYCNHFWFKIDDSMPNFDNIKCQVDL 215

[Close]

BLAST of Csa1G132730 vs. TrEMBL
Match: A0A0A0LY09_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G132760 PE=4 SV=1)

HSP 1 Score: 223.8 bits (569), Expect = 2.0e-55
Identity = 111/180 (61.67%), Postives = 143/180 (79.44%), Query Frame = 1


Query: 30  TKRTRIIRIIGRSLLSVIIFLSVAIITCWLVVFPRTPRLMVETSKVTAHGSTNRHLNATI 89
           TKRTR+IR++GRSLL VI  +++ +I CWLVV P++PRL+VET KV AH ST   LNATI
Sbjct: 13  TKRTRLIRVLGRSLLGVIFLVALGMIICWLVVIPKSPRLIVETGKVIAHSSTISMLNATI 72

Query: 90  VFYIKSYNPNKKASIHMDSVKMIVSDYMGLPFHSTIPTFTLMPRNEMVFNSTVRVNFMYP 149
            F +KSYNPNK+ASIHMD ++MIV D MG+ F S IP+FTL PRN+ V +S V+VNF YP
Sbjct: 73  AFTVKSYNPNKRASIHMDYMRMIV-DNMGVRFSSAIPSFTLTPRNQTVLSSAVQVNFEYP 132

Query: 150 FGRPVHSDWVHLELRFSAQVSYIVNRWRSKPRLLEIYCDHLWLRINDSTPNFDKTKCRVD 209
           FG   +++ ++ EL+FSA+VSY + +W SKPRLLEIYC+H+ L+INDST  FD TKC+VD
Sbjct: 133 FG---YTEEINPELQFSAEVSYSIKKWMSKPRLLEIYCNHILLKINDSTA-FDNTKCKVD 187

[Close]

BLAST of Csa1G132730 vs. TrEMBL
Match: A0A0A0LVK9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G132770 PE=4 SV=1)

HSP 1 Score: 223.0 bits (567), Expect = 3.4e-55
Identity = 118/208 (56.73%), Postives = 148/208 (71.15%), Query Frame = 1


Query: 3   STTTQGEGASSSIIEAPKRSFCRQRETTKRTRIIRIIGRSLLSVIIFLSVAIITCWLVVF 62
           STT +GE +SS      K+S   Q ETTK+TRIIRIIGRSLLSVI  + +A++ CWLVVF
Sbjct: 4   STTAKGEASSS------KKSSKGQNETTKKTRIIRIIGRSLLSVIFLVGLAMVICWLVVF 63

Query: 63  PRTPRLMVETSKVTAHGSTNRHLNATIVFYIKSYNPNKKASIHMDSVKMIVSDYMGLPFH 122
           P+ PR+ VET +V AH ST+  LNATIVF +K YNPNK+AS+H+ S++MIV+  MG  F 
Sbjct: 64  PKNPRIFVETGRVIAHNSTHNMLNATIVFTVKCYNPNKRASVHLHSMRMIVTS-MGQAFS 123

Query: 123 STIPTFTLMPRNEMVFNSTVRVNFMYPFGRPVHSDWVHLELRFSAQVSYIVNRWRSKPRL 182
           S IPTF   P N+ V +  V VNF YPFG   H + ++ EL FSA++SY V  W S+PRL
Sbjct: 124 SVIPTFMQTPGNQTVLSPAVEVNFDYPFG---HQEEINPELHFSAEISYSVEHWTSRPRL 183

Query: 183 LEIYCDHLWLRINDSTPNFDKTKCRVDL 211
           L IYC++L LRIND T  F+ TKC VDL
Sbjct: 184 LLIYCNNLLLRIND-TRTFENTKCNVDL 200

[Close]

BLAST of Csa1G132730 vs. TrEMBL
Match: A0A0A0LSV0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G134270 PE=4 SV=1)

HSP 1 Score: 210.7 bits (535), Expect = 1.7e-51
Identity = 112/214 (52.34%), Postives = 148/214 (69.16%), Query Frame = 1


Query: 1   MRSTTTQGEGASSSIIEAPKR-SFCRQRETTKRTRIIRIIGRSLLSVIIFLSVAIITCWL 60
           MRS    GE        + K  S+  +  T KRTR++RI GR+LL ++I +++A+I CWL
Sbjct: 1   MRSNGKAGEPPPPPSSSSSKEMSYVIKHGTAKRTRVLRITGRTLLGLMILVAIAMIICWL 60

Query: 61  VVFPRTPRLMVETSKVTAHGSTNRHLNATIVFYIKSYNPNKKASIHMDSVKMIVSDYMGL 120
           +VFPR P ++VET +V  H  T+R LNATI F + SYNPNKKASI MDS++MIVSD MGL
Sbjct: 61  IVFPRNPDIIVETGQVIPHSLTDRKLNATIAFTVTSYNPNKKASIRMDSMRMIVSD-MGL 120

Query: 121 PFHSTIPTFTLMPRNEMVFNSTVRVNFMYPFGRP---VHSDWVHLELRFSAQVSYIVNRW 180
            F S IP+FT  P+N+ V  ST++ NF+YPFG     +  + +  ELRFSA+VSYI+ RW
Sbjct: 121 SFWSDIPSFTQPPKNKTVLTSTIQGNFIYPFGHMKELMKLEGISPELRFSAKVSYIMERW 180

Query: 181 RSKPRLLEIYCDHLWLRINDSTPNFDKTKCRVDL 211
            S+ RL+E+YCD L L+ NDST  FD  KC+VDL
Sbjct: 181 TSRDRLVEVYCDSLRLKFNDSTV-FDNKKCKVDL 212

[Close]

BLAST of Csa1G132730 vs. TAIR10
Match: AT1G08160.1 (AT1G08160.1 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family)

HSP 1 Score: 59.3 bits (142), Expect = 3.3e-09
Identity = 46/179 (25.70%), Postives = 84/179 (46.93%), Query Frame = 1


Query: 42  SLLSVIIFLSVAIITCWLVVFPRTPRLMVETSKVT--AHGSTNRHLNATIVFYIKSYNPN 101
           +L+ + + + +AI+  +L + P+     VE + V   A G+ + H+NA   + IKSYNP 
Sbjct: 43  ALVLLGLLVGLAILITYLTLRPKRLIYTVEAASVQEFAIGNNDDHINAKFSYVIKSYNPE 102

Query: 102 KKASIHMDSVKMIVSDYMGLPFHSTIPTFTLMPRNE------MVFNSTVRVNFMYPFGRP 161
           K  S+   S+++  + +     H  I  F   P+NE      +V ++     F     R 
Sbjct: 103 KHVSVRYHSMRISTAHHNQSVAHKNISPFKQRPKNETRIETQLVSHNVALSKFNARDLRA 162

Query: 162 VHS-DWVHLELRFSAQVSYIVNRWRSKPRLLEIYCDHLWLRINDST-PNFDKTKCRVDL 211
             S   + +E+  +A+VSY    +RS+ R L+  C  + + +  S+   F +  C+  L
Sbjct: 163 EKSKGTIEMEVYITARVSYKTWIFRSRRRTLKAVCTPVMINVTSSSLDGFQRVLCKTRL 221

[Close]

BLAST of Csa1G132730 vs. NCBI nr
Match: gi|700209767|gb|KGN64863.1| (hypothetical protein Csa_1G132730 [Cucumis sativus])

HSP 1 Score: 428.7 bits (1101), Expect = 5.8e-117
Identity = 210/210 (100.00%), Postives = 210/210 (100.00%), Query Frame = 1


Query: 1   MRSTTTQGEGASSSIIEAPKRSFCRQRETTKRTRIIRIIGRSLLSVIIFLSVAIITCWLV 60
           MRSTTTQGEGASSSIIEAPKRSFCRQRETTKRTRIIRIIGRSLLSVIIFLSVAIITCWLV
Sbjct: 1   MRSTTTQGEGASSSIIEAPKRSFCRQRETTKRTRIIRIIGRSLLSVIIFLSVAIITCWLV 60

Query: 61  VFPRTPRLMVETSKVTAHGSTNRHLNATIVFYIKSYNPNKKASIHMDSVKMIVSDYMGLP 120
           VFPRTPRLMVETSKVTAHGSTNRHLNATIVFYIKSYNPNKKASIHMDSVKMIVSDYMGLP
Sbjct: 61  VFPRTPRLMVETSKVTAHGSTNRHLNATIVFYIKSYNPNKKASIHMDSVKMIVSDYMGLP 120

Query: 121 FHSTIPTFTLMPRNEMVFNSTVRVNFMYPFGRPVHSDWVHLELRFSAQVSYIVNRWRSKP 180
           FHSTIPTFTLMPRNEMVFNSTVRVNFMYPFGRPVHSDWVHLELRFSAQVSYIVNRWRSKP
Sbjct: 121 FHSTIPTFTLMPRNEMVFNSTVRVNFMYPFGRPVHSDWVHLELRFSAQVSYIVNRWRSKP 180

Query: 181 RLLEIYCDHLWLRINDSTPNFDKTKCRVDL 211
           RLLEIYCDHLWLRINDSTPNFDKTKCRVDL
Sbjct: 181 RLLEIYCDHLWLRINDSTPNFDKTKCRVDL 210

[Close]

BLAST of Csa1G132730 vs. NCBI nr
Match: gi|659071883|ref|XP_008462391.1| (PREDICTED: uncharacterized protein At1g08160-like [Cucumis melo])

HSP 1 Score: 387.5 bits (994), Expect = 1.5e-104
Identity = 190/211 (90.05%), Postives = 201/211 (95.26%), Query Frame = 1


Query: 1   MRSTTTQGEGASSSIIEAPKRSFCRQR-ETTKRTRIIRIIGRSLLSVIIFLSVAIITCWL 60
           MRSTTTQ E ASSSI+EAPKRSF RQR ETTKRTRIIRIIGRSLL VIIFLSVAIITCWL
Sbjct: 1   MRSTTTQEEEASSSIVEAPKRSFYRQRHETTKRTRIIRIIGRSLLCVIIFLSVAIITCWL 60

Query: 61  VVFPRTPRLMVETSKVTAHGSTNRHLNATIVFYIKSYNPNKKASIHMDSVKMIVSDYMGL 120
           VVFPRTPRLMVETSKVTAHGSTNR LNATIVFYIKSYNPNKKASI+MDS+KMIV DYMGL
Sbjct: 61  VVFPRTPRLMVETSKVTAHGSTNRKLNATIVFYIKSYNPNKKASIYMDSMKMIVKDYMGL 120

Query: 121 PFHSTIPTFTLMPRNEMVFNSTVRVNFMYPFGRPVHSDWVHLELRFSAQVSYIVNRWRSK 180
           PFHS IPTFTLMPRNE VFNSTVRVN +YPFGRPVHSDW+HLELRFSA+VSYIVNRW+SK
Sbjct: 121 PFHSAIPTFTLMPRNETVFNSTVRVNLIYPFGRPVHSDWIHLELRFSAKVSYIVNRWKSK 180

Query: 181 PRLLEIYCDHLWLRINDSTPNFDKTKCRVDL 211
           PRLLEIYCDHLWL+INDSTPNFD+TKC+VD+
Sbjct: 181 PRLLEIYCDHLWLKINDSTPNFDRTKCKVDI 211

[Close]

BLAST of Csa1G132730 vs. NCBI nr
Match: gi|778664977|ref|XP_011648453.1| (PREDICTED: uncharacterized protein LOC105434468 [Cucumis sativus])

HSP 1 Score: 299.3 bits (765), Expect = 5.4e-78
Identity = 142/142 (100.00%), Postives = 142/142 (100.00%), Query Frame = 1


Query: 69  MVETSKVTAHGSTNRHLNATIVFYIKSYNPNKKASIHMDSVKMIVSDYMGLPFHSTIPTF 128
           MVETSKVTAHGSTNRHLNATIVFYIKSYNPNKKASIHMDSVKMIVSDYMGLPFHSTIPTF
Sbjct: 1   MVETSKVTAHGSTNRHLNATIVFYIKSYNPNKKASIHMDSVKMIVSDYMGLPFHSTIPTF 60

Query: 129 TLMPRNEMVFNSTVRVNFMYPFGRPVHSDWVHLELRFSAQVSYIVNRWRSKPRLLEIYCD 188
           TLMPRNEMVFNSTVRVNFMYPFGRPVHSDWVHLELRFSAQVSYIVNRWRSKPRLLEIYCD
Sbjct: 61  TLMPRNEMVFNSTVRVNFMYPFGRPVHSDWVHLELRFSAQVSYIVNRWRSKPRLLEIYCD 120

Query: 189 HLWLRINDSTPNFDKTKCRVDL 211
           HLWLRINDSTPNFDKTKCRVDL
Sbjct: 121 HLWLRINDSTPNFDKTKCRVDL 142

[Close]

BLAST of Csa1G132730 vs. NCBI nr
Match: gi|778659281|ref|XP_011654120.1| (PREDICTED: uncharacterized protein LOC105435303 [Cucumis sativus])

HSP 1 Score: 289.3 bits (739), Expect = 5.5e-75
Identity = 135/208 (64.90%), Postives = 165/208 (79.33%), Query Frame = 1


Query: 3   STTTQGEGASSSIIEAPKRSFCRQRETTKRTRIIRIIGRSLLSVIIFLSVAIITCWLVVF 62
           +TTTQGE +SSSII APKR   RQ    KRTR+IRIIGRSLL  I+ L +AI+TCW VV 
Sbjct: 8   TTTTQGEASSSSIIRAPKRGAYRQHGIAKRTRVIRIIGRSLLCAIMLLGIAILTCWFVVI 67

Query: 63  PRTPRLMVETSKVTAHGSTNRHLNATIVFYIKSYNPNKKASIHMDSVKMIVSDYMGLPFH 122
           PRTP+LMVE+ +VT + ST R LNATIVF I+SYNPNK+ASI++DS+KM V +YM +PFH
Sbjct: 68  PRTPQLMVESGQVTGYHSTIRKLNATIVFNIRSYNPNKRASIYVDSMKMTVKNYMSVPFH 127

Query: 123 STIPTFTLMPRNEMVFNSTVRVNFMYPFGRPVHSDWVHLELRFSAQVSYIVNRWRSKPRL 182
           S IP FT+ PRN  V   T+ VN +YPFGRP+H+ W+H+EL FSA+VSYI NRW SKPRL
Sbjct: 128 SDIPNFTMTPRNMTVLTPTILVNCIYPFGRPLHAGWIHIELSFSAKVSYIFNRWASKPRL 187

Query: 183 LEIYCDHLWLRINDSTPNFDKTKCRVDL 211
           +EIYC+H W +I+DS PNFD  KC+VDL
Sbjct: 188 MEIYCNHFWFKIDDSMPNFDNIKCQVDL 215

[Close]

BLAST of Csa1G132730 vs. NCBI nr
Match: gi|659071878|ref|XP_008462366.1| (PREDICTED: uncharacterized protein LOC103500736 [Cucumis melo])

HSP 1 Score: 280.4 bits (716), Expect = 2.6e-72
Identity = 133/208 (63.94%), Postives = 162/208 (77.88%), Query Frame = 1


Query: 3   STTTQGEGASSSIIEAPKRSFCRQRETTKRTRIIRIIGRSLLSVIIFLSVAIITCWLVVF 62
           +TTTQGE +SSSII APKR   RQ    KRTR+IRIIGRSLL VI+ L +AI+TCW VV 
Sbjct: 6   TTTTQGEASSSSIIRAPKRGPYRQHGIAKRTRVIRIIGRSLLCVIMLLGIAILTCWFVVI 65

Query: 63  PRTPRLMVETSKVTAHGSTNRHLNATIVFYIKSYNPNKKASIHMDSVKMIVSDYMGLPFH 122
           PRTPRLMVE+ KVT + STNR LNATIV  I+SYNPNK+ASI+MDS+KM V + M +PFH
Sbjct: 66  PRTPRLMVESGKVTGYHSTNRKLNATIVLNIRSYNPNKRASIYMDSMKMTVKNSMSVPFH 125

Query: 123 STIPTFTLMPRNEMVFNSTVRVNFMYPFGRPVHSDWVHLELRFSAQVSYIVNRWRSKPRL 182
           S IP FT+ P+N  V N T+ VNF+YPFG P+H+ W+H+EL FSA+VSY++NRW SKPR 
Sbjct: 126 SDIPNFTMTPQNVTVLNPTILVNFIYPFGLPLHAGWIHIELSFSAKVSYLLNRWASKPRW 185

Query: 183 LEIYCDHLWLRINDSTPNFDKTKCRVDL 211
           +EIYC+H   +I DS PNF   +C VDL
Sbjct: 186 MEIYCNHFRFKIGDSMPNFQNIECLVDL 213

The following BLAST results are available for this feature:

BLAST of Csa1G132730 vs. Swiss-Prot


Match Name	E-value	Identity	Description
Y1816_ARATH	5.8e-08	25.70	Uncharacterized protein At1g08160 OS=Arabidopsis thaliana GN=At1g08160 PE=2 SV=1	[more]

BLAST of Csa1G132730 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LSU5_CUCSA	4.1e-117	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G132730 PE=4 SV=1	[more]
A0A0A0LV68_CUCSA	3.9e-75	64.90	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G132740 PE=4 SV=1	[more]
A0A0A0LY09_CUCSA	2.0e-55	61.67	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G132760 PE=4 SV=1	[more]
A0A0A0LVK9_CUCSA	3.4e-55	56.73	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G132770 PE=4 SV=1	[more]
A0A0A0LSV0_CUCSA	1.7e-51	52.34	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G134270 PE=4 SV=1	[more]

BLAST of Csa1G132730 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G08160.1	3.3e-09	25.70	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein f...	[more]

BLAST of Csa1G132730 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|700209767\|gb\|KGN64863.1\|	5.8e-117	100.00	hypothetical protein Csa_1G132730 [Cucumis sativus]	[more]
gi\|659071883\|ref\|XP_008462391.1\|	1.5e-104	90.05	PREDICTED: uncharacterized protein At1g08160-like [Cucumis melo]	[more]
gi\|778664977\|ref\|XP_011648453.1\|	5.4e-78	100.00	PREDICTED: uncharacterized protein LOC105434468 [Cucumis sativus]	[more]
gi\|778659281\|ref\|XP_011654120.1\|	5.5e-75	64.90	PREDICTED: uncharacterized protein LOC105435303 [Cucumis sativus]	[more]
gi\|659071878\|ref\|XP_008462366.1\|	2.6e-72	63.94	PREDICTED: uncharacterized protein LOC103500736 [Cucumis melo]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR004864	LEA_2

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csa1G132730.1	Csa1G132730.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004864	Late embryogenesis abundant protein, LEA-14	PFAM	PF03168	LEA_2	coord: 93..175 score: 2.
None	No IPR available	PANTHER	PTHR31852	FAMILY NOT NAMED	coord: 31..210 score: 1.3

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Csa1G132730	Cla001046	Watermelon (97103) v1	cuwmB047
Csa1G132730	MELO3C004856	Melon (DHL92) v3.5.1	cumeB015
Csa1G132730	ClCG01G013920	Watermelon (Charleston Gray)	cuwcgB014
Csa1G132730	Lsi03G000610	Bottle gourd (USVL1VR-Ls)	culsiB044
Csa1G132730	MELO3C035547.2	Melon (DHL92) v3.6.1	cumedB010
Csa1G132730	Cla97C01G012890	Watermelon (97103) v2	cuwmbB002
Csa1G132730	Bhi08G000113	Wax gourd	cuwgoB049
Csa1G132730	CSPI01G14000	Wild cucumber (PI 183967)	cpicuB000
Csa1G132730	Cucsa.200330	Cucumber (Gy14) v1	cgycuB305
Csa1G132730	CmaCh13G002650	Cucurbita maxima (Rimu)	cmacuB203
Csa1G132730	CmaCh12G008110	Cucurbita maxima (Rimu)	cmacuB163
Csa1G132730	CmoCh12G008200	Cucurbita moschata (Rifu)	cmocuB148
Csa1G132730	CmoCh13G002720	Cucurbita moschata (Rifu)	cmocuB188
Csa1G132730	Cp4.1LG07g06710	Cucurbita pepo (Zucchini)	cpecuB805
Csa1G132730	Cp4.1LG20g07350	Cucurbita pepo (Zucchini)	cpecuB516
Csa1G132730	CsGy1G013990	Cucumber (Gy14) v2	cgybcuB001

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Csa1G132730	Silver-seed gourd	carcuB0185
Csa1G132730	Watermelon (97103) v2	cuwmbB026
Csa1G132730	Cucurbita maxima (Rimu)	cmacuB579
Csa1G132730	Watermelon (Charleston Gray)	cuwcgB028
Csa1G132730	Watermelon (97103) v1	cuwmB065
Csa1G132730	Bottle gourd (USVL1VR-Ls)	culsiB005