Carg14224 (gene) Silver-seed gourd

Overview
NameCarg14224
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
Description50S ribosomal protein l23-like
LocationCucurbita_argyrosperma_scaffold_045 : 668650 .. 669171 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGAAGCAGACTCGGAAGAAGAGTTGTTCACTTCGCAAATCTTCCAATCAAACTTCTTATGCCAACTTCCTTCACCAACATCACTGAAATTGCTCTCAAAACCATTCCATCTGCTTCCAAAATCGAAATCAAGCGCGTTCTCGAGAGCCTCTACGGCTTTGAGGTCGATAAAGTTCGAACTCTCAACATGGATGGTAAGAAGAAGAAGCGCGGAGGGCTTTTGATTGCAAAGCCTGATTACAAGAAGGCCTATGTTACTCTCAGGAATCCCTTGTCAATTTCTCCGGACGTCTACCCCATCCGGATTATAGAGGAGGACAAGAGGAATATGAATAAACAGTCTAAGTCCAGCATTGTTGAAGAGGGAGAGGCCAAGCGGCATTGGCTGCATGAAAAGGAAGCAGTGGGACTCAAAACTTACAAGGGTTTTGCTGATAGAGGCCGCCGACGAATTGGCGGCGCTGAAGCTGTTGAACCATCAACTAAGTTTCCTTGGAGTAGCATGAGGTCCGGTAGGTAG

mRNA sequence

ATGGGAAGCAGACTCGGAAGAAGAGTTGTTCACTTCGCAAATCTTCCAATCAAACTTCTTATGCCAACTTCCTTCACCAACATCACTGAAATTGCTCTCAAAACCATTCCATCTGCTTCCAAAATCGAAATCAAGCGCGTTCTCGAGAGCCTCTACGGCTTTGAGGTCGATAAAGTTCGAACTCTCAACATGGATGGTAAGAAGAAGAAGCGCGGAGGGCTTTTGATTGCAAAGCCTGATTACAAGAAGGCCTATGTTACTCTCAGGAATCCCTTGTCAATTTCTCCGGACGTCTACCCCATCCGGATTATAGAGGAGGACAAGAGGAATATGAATAAACAGTCTAAGTCCAGCATTGTTGAAGAGGGAGAGGCCAAGCGGCATTGGCTGCATGAAAAGGAAGCAGTGGGACTCAAAACTTACAAGGGTTTTGCTGATAGAGGCCGCCGACGAATTGGCGGCGCTGAAGCTGTTGAACCATCAACTAAGTTTCCTTGGAGTAGCATGAGGTCCGGTAGGTAG

Coding sequence (CDS)

ATGGGAAGCAGACTCGGAAGAAGAGTTGTTCACTTCGCAAATCTTCCAATCAAACTTCTTATGCCAACTTCCTTCACCAACATCACTGAAATTGCTCTCAAAACCATTCCATCTGCTTCCAAAATCGAAATCAAGCGCGTTCTCGAGAGCCTCTACGGCTTTGAGGTCGATAAAGTTCGAACTCTCAACATGGATGGTAAGAAGAAGAAGCGCGGAGGGCTTTTGATTGCAAAGCCTGATTACAAGAAGGCCTATGTTACTCTCAGGAATCCCTTGTCAATTTCTCCGGACGTCTACCCCATCCGGATTATAGAGGAGGACAAGAGGAATATGAATAAACAGTCTAAGTCCAGCATTGTTGAAGAGGGAGAGGCCAAGCGGCATTGGCTGCATGAAAAGGAAGCAGTGGGACTCAAAACTTACAAGGGTTTTGCTGATAGAGGCCGCCGACGAATTGGCGGCGCTGAAGCTGTTGAACCATCAACTAAGTTTCCTTGGAGTAGCATGAGGTCCGGTAGGTAG

Protein sequence

MGSRLGRRVVHFANLPIKLLMPTSFTNITEIALKTIPSASKIEIKRVLESLYGFEVDKVRTLNMDGKKKKRGGLLIAKPDYKKAYVTLRNPLSISPDVYPIRIIEEDKRNMNKQSKSSIVEEGEAKRHWLHEKEAVGLKTYKGFADRGRRRIGGAEAVEPSTKFPWSSMRSGR
Homology
[Close]
BLAST of Carg14224 vs. NCBI nr
Match: XP_023531609.1 (uncharacterized protein LOC111793793 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 340.9 bits (873), Expect = 2.6e-90
Identity = 173/173 (100.00%), Postives = 173/173 (100.00%), Query Frame = 0 

Query: 1   MGSRLGRRVVHFANLPIKLLMPTSFTNITEIALKTIPSASKIEIKRVLESLYGFEVDKVR 60
           MGSRLGRRVVHFANLPIKLLMPTSFTNITEIALKTIPSASKIEIKRVLESLYGFEVDKVR
Sbjct: 1   MGSRLGRRVVHFANLPIKLLMPTSFTNITEIALKTIPSASKIEIKRVLESLYGFEVDKVR 60

Query: 61  TLNMDGKKKKRGGLLIAKPDYKKAYVTLRNPLSISPDVYPIRIIEEDKRNMNKQSKSSIV 120
           TLNMDGKKKKRGGLLIAKPDYKKAYVTLRNPLSISPDVYPIRIIEEDKRNMNKQSKSSIV
Sbjct: 61  TLNMDGKKKKRGGLLIAKPDYKKAYVTLRNPLSISPDVYPIRIIEEDKRNMNKQSKSSIV 120

Query: 121 EEGEAKRHWLHEKEAVGLKTYKGFADRGRRRIGGAEAVEPSTKFPWSSMRSGR 174
           EEGEAKRHWLHEKEAVGLKTYKGFADRGRRRIGGAEAVEPSTKFPWSSMRSGR
Sbjct: 121 EEGEAKRHWLHEKEAVGLKTYKGFADRGRRRIGGAEAVEPSTKFPWSSMRSGR 173

[Close]
BLAST of Carg14224 vs. NCBI nr
Match: XP_022943267.1 (uncharacterized protein LOC111448049 [Cucurbita moschata])

HSP 1 Score: 337.4 bits (864), Expect = 2.8e-89
Identity = 172/173 (99.42%), Postives = 172/173 (99.42%), Query Frame = 0 

Query: 1   MGSRLGRRVVHFANLPIKLLMPTSFTNITEIALKTIPSASKIEIKRVLESLYGFEVDKVR 60
           M SRLGRRVVHFANLPIKLLMPTSFTNITEIALKTIPSASKIEIKRVLESLYGFEVDKVR
Sbjct: 1   MVSRLGRRVVHFANLPIKLLMPTSFTNITEIALKTIPSASKIEIKRVLESLYGFEVDKVR 60

Query: 61  TLNMDGKKKKRGGLLIAKPDYKKAYVTLRNPLSISPDVYPIRIIEEDKRNMNKQSKSSIV 120
           TLNMDGKKKKRGGLLIAKPDYKKAYVTLRNPLSISPDVYPIRIIEEDKRNMNKQSKSSIV
Sbjct: 61  TLNMDGKKKKRGGLLIAKPDYKKAYVTLRNPLSISPDVYPIRIIEEDKRNMNKQSKSSIV 120

Query: 121 EEGEAKRHWLHEKEAVGLKTYKGFADRGRRRIGGAEAVEPSTKFPWSSMRSGR 174
           EEGEAKRHWLHEKEAVGLKTYKGFADRGRRRIGGAEAVEPSTKFPWSSMRSGR
Sbjct: 121 EEGEAKRHWLHEKEAVGLKTYKGFADRGRRRIGGAEAVEPSTKFPWSSMRSGR 173

[Close]
BLAST of Carg14224 vs. NCBI nr
Match: XP_008455593.1 (PREDICTED: uncharacterized protein LOC103495731 isoform X1 [Cucumis melo])

HSP 1 Score: 324.3 bits (830), Expect = 2.5e-85
Identity = 165/174 (94.83%), Postives = 170/174 (97.70%), Query Frame = 0 

Query: 1   MGSRLGRRVVHFANLPIKLLMPTSFTNITEIALKTIPSASKIEIKRVLESLYGFEVDKVR 60
           MGSRLGRRVVHFANLPIKLLMPTSFTNITEIALKTIPSASKIEIKRVLESLYGF+VDKVR
Sbjct: 1   MGSRLGRRVVHFANLPIKLLMPTSFTNITEIALKTIPSASKIEIKRVLESLYGFQVDKVR 60

Query: 61  TLNMDGKKKKRGGLLIAKPDYKKAYVTLRNPLSISPDVYPIRIIEEDKRNMNKQSKSSIV 120
           TLNM+GKKKKRGG+LIAKPDYKKAYVTLRNPLSIS D+YPIRIIEEDKRNMNKQSKSSIV
Sbjct: 61  TLNMEGKKKKRGGILIAKPDYKKAYVTLRNPLSISQDMYPIRIIEEDKRNMNKQSKSSIV 120

Query: 121 EEGEAKRHWLHEKEAVGLKTYKGFADRGRRRI-GGAEAVEPSTKFPWSSMRSGR 174
           EEGEAKRHWLHEKE VG+KTYKGFADRGRRRI GGAE VEPSTKFPWSSMRSGR
Sbjct: 121 EEGEAKRHWLHEKEPVGIKTYKGFADRGRRRIGGGAETVEPSTKFPWSSMRSGR 174

[Close]
BLAST of Carg14224 vs. NCBI nr
Match: XP_004137193.1 (PREDICTED: uncharacterized protein LOC101221365 [Cucumis sativus] >KGN53646.1 hypothetical protein Csa_4G095560 [Cucumis sativus])

HSP 1 Score: 323.6 bits (828), Expect = 4.2e-85
Identity = 164/174 (94.25%), Postives = 170/174 (97.70%), Query Frame = 0 

Query: 1   MGSRLGRRVVHFANLPIKLLMPTSFTNITEIALKTIPSASKIEIKRVLESLYGFEVDKVR 60
           MGSRLGRRVVHFANLPIKLLMPTSFTNITEIALKTIPSASKIEIKRVLESLYGFEVDKV+
Sbjct: 1   MGSRLGRRVVHFANLPIKLLMPTSFTNITEIALKTIPSASKIEIKRVLESLYGFEVDKVQ 60

Query: 61  TLNMDGKKKKRGGLLIAKPDYKKAYVTLRNPLSISPDVYPIRIIEEDKRNMNKQSKSSIV 120
           TLNM+GKKKKRGG+LIAKPDYKKAYVTLRNPLSISPD+YPIRIIEEDKRNMNKQSKSSIV
Sbjct: 61  TLNMEGKKKKRGGILIAKPDYKKAYVTLRNPLSISPDMYPIRIIEEDKRNMNKQSKSSIV 120

Query: 121 EEGEAKRHWLHEKEAVGLKTYKGFADRGRRRI-GGAEAVEPSTKFPWSSMRSGR 174
           EEGEAK+HWLHEKE VG+KTYKGFADRGRRR  GGAE VEPSTKFPWSSMRSGR
Sbjct: 121 EEGEAKKHWLHEKEPVGIKTYKGFADRGRRRSGGGAETVEPSTKFPWSSMRSGR 174

[Close]
BLAST of Carg14224 vs. NCBI nr
Match: XP_022929525.1 (uncharacterized protein LOC111436066 [Cucurbita moschata])

HSP 1 Score: 323.6 bits (828), Expect = 4.2e-85
Identity = 163/173 (94.22%), Postives = 166/173 (95.95%), Query Frame = 0 

Query: 1   MGSRLGRRVVHFANLPIKLLMPTSFTNITEIALKTIPSASKIEIKRVLESLYGFEVDKVR 60
           MGSRLGRRV+HFANLPIKLLMPTSFTNITEIALKTIPSASKIEIKRVLESLYGFEVDKVR
Sbjct: 1   MGSRLGRRVIHFANLPIKLLMPTSFTNITEIALKTIPSASKIEIKRVLESLYGFEVDKVR 60

Query: 61  TLNMDGKKKKRGGLLIAKPDYKKAYVTLRNPLSISPDVYPIRIIEEDKRNMNKQSKSSIV 120
           TLNMDGKKKKRGGLLIAKPDYKKAYVTLRNPLSISPDVYPIRIIEEDKRNMNKQSKSSIV
Sbjct: 61  TLNMDGKKKKRGGLLIAKPDYKKAYVTLRNPLSISPDVYPIRIIEEDKRNMNKQSKSSIV 120

Query: 121 EEGEAKRHWLHEKEAVGLKTYKGFADRGRRRIGGAEAVEPSTKFPWSSMRSGR 174
           EEGEAKRHWLHEKE VG K YKGF++R RRR G AE VEPSTKFPWSSMRSGR
Sbjct: 121 EEGEAKRHWLHEKEPVGFKAYKGFSNRDRRRTGSAETVEPSTKFPWSSMRSGR 173

[Close]
BLAST of Carg14224 vs. TAIR10
Match: AT4G39880.1 (Ribosomal protein L23/L15e family protein)

HSP 1 Score: 209.1 bits (531), Expect = 2.1e-54
Identity = 116/175 (66.29%), Postives = 131/175 (74.86%), Query Frame = 0 

Query: 1   MGSRLGRRVVHFANLPIKLLMPTSFTNITEIALKTIPSASKIEIKRVLESLYGFEVDKVR 60
           MGSRLG RVVHFANLPIKLLMP   TNI E ALKTIPSASKIEIKRVLESLYGF+V+KV 
Sbjct: 1   MGSRLGGRVVHFANLPIKLLMPAKLTNIHEFALKTIPSASKIEIKRVLESLYGFDVEKVN 60

Query: 61  TLNMDGKKKKRGGLLIAKPDYKKAYVTLRNPLSISPDVYPIRIIEEDKRNMNKQSKSSIV 120
           TLNMDGKKKKRGGLLIAK DYKKAYVTLR+PLSIS D++P++ IEED+++  K S S + 
Sbjct: 61  TLNMDGKKKKRGGLLIAKADYKKAYVTLRSPLSISRDLFPVKYIEEDRKSKVKGS-SFVE 120

Query: 121 EEGEAKRHWLHEKEAVGLKTY-KGFADRGRRRIG----GAEAVEPSTKFPWSSMR 171
           EE + K HWL  KE   +  Y KG   RG  R      G  A   + KFPWS+MR
Sbjct: 121 EEDDKKSHWLDRKEKREIGGYGKGKGRRGGERANSPTRGGAAAAGTAKFPWSNMR 174

[Close]
BLAST of Carg14224 vs. Swiss-Prot
Match: sp|Q605B4|RL23_METCA (50S ribosomal protein L23 OS=Methylococcus capsulatus (strain ATCC 33009 / NCIMB 11132 / Bath) OX=243233 GN=rplW PE=3 SV=1)

HSP 1 Score: 54.7 bits (130), Expect = 1.2e-06
Identity = 25/60 (41.67%), Postives = 40/60 (66.67%), Query Frame = 0 

Query: 30 EIALKTIPSASKIEIKRVLESLYGFEVDKVRTLNMDGKKKKRGGLLIAKPDYKKAYVTLR 89
          +   +  P+ASK++IK  +E ++G +VD VR LN+ GK K+ G  +  + D+KKAYV L+
Sbjct: 28 QFVFRVKPAASKLQIKSAVELMFGVKVDSVRILNVKGKSKRFGRFMGQRSDWKKAYVKLK 87

[Close]
BLAST of Carg14224 vs. Swiss-Prot
Match: sp|Q0I161|RL23_HAES1 (50S ribosomal protein L23 OS=Haemophilus somnus (strain 129Pt) OX=205914 GN=rplW PE=3 SV=1)

HSP 1 Score: 54.3 bits (129), Expect = 1.6e-06
Identity = 31/73 (42.47%), Postives = 44/73 (60.27%), Query Frame = 0 

Query: 26 TNITE----IALKTIPSASKIEIKRVLESLYGFEVDKVRTLNMDGKKKKRGGLLIAKPDY 85
          TN TE    I  K    A+K+EI   +E L+  +VD VRT+ + GK K+RG  +  + D+
Sbjct: 21 TNNTEKSNTIVFKVALDANKVEIANAVEQLFEVKVDSVRTVVVKGKTKRRGAKMGQRSDW 80

Query: 86 KKAYVTLRNPLSI 95
          KKAYVTL+   S+
Sbjct: 81 KKAYVTLQEGQSL 93

[Close]
BLAST of Carg14224 vs. Swiss-Prot
Match: sp|A0KF23|RL23_AERHH (50S ribosomal protein L23 OS=Aeromonas hydrophila subsp. hydrophila (strain ATCC 7966 / DSM 30187 / JCM 1027 / KCTC 2358 / NCIMB 9240) OX=380703 GN=rplW PE=3 SV=1)

HSP 1 Score: 53.9 bits (128), Expect = 2.0e-06
Identity = 27/59 (45.76%), Postives = 37/59 (62.71%), Query Frame = 0 

Query: 31 IALKTIPSASKIEIKRVLESLYGFEVDKVRTLNMDGKKKKRGGLLIAKPDYKKAYVTLR 90
          I  K    A+K E+K  +  L+  EV+ VRTLNM GK K+ G  +  + D+KKAYVTL+
Sbjct: 30 IVFKVAVDATKAEVKAAVAKLFEVEVETVRTLNMKGKTKRAGARVGRRSDWKKAYVTLK 88

[Close]
BLAST of Carg14224 vs. Swiss-Prot
Match: sp|A4ST04|RL23_AERS4 (50S ribosomal protein L23 OS=Aeromonas salmonicida (strain A449) OX=382245 GN=rplW PE=3 SV=1)

HSP 1 Score: 53.5 bits (127), Expect = 2.7e-06
Identity = 27/59 (45.76%), Postives = 37/59 (62.71%), Query Frame = 0 

Query: 31 IALKTIPSASKIEIKRVLESLYGFEVDKVRTLNMDGKKKKRGGLLIAKPDYKKAYVTLR 90
          I  K    A+K E+K  +  L+  EV+ VRTLNM GK K+ G  +  + D+KKAYVTL+
Sbjct: 30 IVFKIAVDATKAEVKAAVAKLFEVEVETVRTLNMKGKTKRSGARVGRRSDWKKAYVTLK 88

[Close]
BLAST of Carg14224 vs. Swiss-Prot
Match: sp|Q0ABH3|RL23_ALKEH (50S ribosomal protein L23 OS=Alkalilimnicola ehrlichii (strain ATCC BAA-1101 / DSM 17681 / MLHE-1) OX=187272 GN=rplW PE=3 SV=1)

HSP 1 Score: 53.5 bits (127), Expect = 2.7e-06
Identity = 27/59 (45.76%), Postives = 38/59 (64.41%), Query Frame = 0 

Query: 30 EIALKTIPSASKIEIKRVLESLYGFEVDKVRTLNMDGKKKKRGGLLIAKPDYKKAYVTL 89
          E+  K    A K EI++ +E L+  +V  VRT+ M GK+K+ G L   +PD+KKAYVTL
Sbjct: 28 EVVFKVAVDARKAEIRQAVEQLFDVKVRDVRTVKMKGKRKRFGRLEGKRPDWKKAYVTL 86

[Close]
BLAST of Carg14224 vs. TrEMBL
Match: tr|A0A1S3C191|A0A1S3C191_CUCME (uncharacterized protein LOC103495731 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103495731 PE=4 SV=1)

HSP 1 Score: 324.3 bits (830), Expect = 1.6e-85
Identity = 165/174 (94.83%), Postives = 170/174 (97.70%), Query Frame = 0 

Query: 1   MGSRLGRRVVHFANLPIKLLMPTSFTNITEIALKTIPSASKIEIKRVLESLYGFEVDKVR 60
           MGSRLGRRVVHFANLPIKLLMPTSFTNITEIALKTIPSASKIEIKRVLESLYGF+VDKVR
Sbjct: 1   MGSRLGRRVVHFANLPIKLLMPTSFTNITEIALKTIPSASKIEIKRVLESLYGFQVDKVR 60

Query: 61  TLNMDGKKKKRGGLLIAKPDYKKAYVTLRNPLSISPDVYPIRIIEEDKRNMNKQSKSSIV 120
           TLNM+GKKKKRGG+LIAKPDYKKAYVTLRNPLSIS D+YPIRIIEEDKRNMNKQSKSSIV
Sbjct: 61  TLNMEGKKKKRGGILIAKPDYKKAYVTLRNPLSISQDMYPIRIIEEDKRNMNKQSKSSIV 120

Query: 121 EEGEAKRHWLHEKEAVGLKTYKGFADRGRRRI-GGAEAVEPSTKFPWSSMRSGR 174
           EEGEAKRHWLHEKE VG+KTYKGFADRGRRRI GGAE VEPSTKFPWSSMRSGR
Sbjct: 121 EEGEAKRHWLHEKEPVGIKTYKGFADRGRRRIGGGAETVEPSTKFPWSSMRSGR 174

[Close]
BLAST of Carg14224 vs. TrEMBL
Match: tr|A0A0A0L0J2|A0A0A0L0J2_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G095560 PE=4 SV=1)

HSP 1 Score: 323.6 bits (828), Expect = 2.8e-85
Identity = 164/174 (94.25%), Postives = 170/174 (97.70%), Query Frame = 0 

Query: 1   MGSRLGRRVVHFANLPIKLLMPTSFTNITEIALKTIPSASKIEIKRVLESLYGFEVDKVR 60
           MGSRLGRRVVHFANLPIKLLMPTSFTNITEIALKTIPSASKIEIKRVLESLYGFEVDKV+
Sbjct: 1   MGSRLGRRVVHFANLPIKLLMPTSFTNITEIALKTIPSASKIEIKRVLESLYGFEVDKVQ 60

Query: 61  TLNMDGKKKKRGGLLIAKPDYKKAYVTLRNPLSISPDVYPIRIIEEDKRNMNKQSKSSIV 120
           TLNM+GKKKKRGG+LIAKPDYKKAYVTLRNPLSISPD+YPIRIIEEDKRNMNKQSKSSIV
Sbjct: 61  TLNMEGKKKKRGGILIAKPDYKKAYVTLRNPLSISPDMYPIRIIEEDKRNMNKQSKSSIV 120

Query: 121 EEGEAKRHWLHEKEAVGLKTYKGFADRGRRRI-GGAEAVEPSTKFPWSSMRSGR 174
           EEGEAK+HWLHEKE VG+KTYKGFADRGRRR  GGAE VEPSTKFPWSSMRSGR
Sbjct: 121 EEGEAKKHWLHEKEPVGIKTYKGFADRGRRRSGGGAETVEPSTKFPWSSMRSGR 174

[Close]
BLAST of Carg14224 vs. TrEMBL
Match: tr|A0A1S4E0P8|A0A1S4E0P8_CUCME (uncharacterized protein LOC103495731 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103495731 PE=4 SV=1)

HSP 1 Score: 322.4 bits (825), Expect = 6.2e-85
Identity = 164/173 (94.80%), Postives = 169/173 (97.69%), Query Frame = 0 

Query: 1   MGSRLGRRVVHFANLPIKLLMPTSFTNITEIALKTIPSASKIEIKRVLESLYGFEVDKVR 60
           MGSRLGRRVVHFANLPIKLLMPTSFTNITEIALKTIPSASKIEIKRVLESLYGF+VDKVR
Sbjct: 1   MGSRLGRRVVHFANLPIKLLMPTSFTNITEIALKTIPSASKIEIKRVLESLYGFQVDKVR 60

Query: 61  TLNMDGKKKKRGGLLIAKPDYKKAYVTLRNPLSISPDVYPIRIIEEDKRNMNKQSKSSIV 120
           TLNM+GKKKKRGG+LIAKPDYKKAYVTLRNPLSIS D+YPIRIIEEDKRNMNKQSKSSIV
Sbjct: 61  TLNMEGKKKKRGGILIAKPDYKKAYVTLRNPLSISQDMYPIRIIEEDKRNMNKQSKSSIV 120

Query: 121 EEGEAKRHWLHEKEAVGLKTYKGFADRGRRRI-GGAEAVEPSTKFPWSSMRSG 173
           EEGEAKRHWLHEKE VG+KTYKGFADRGRRRI GGAE VEPSTKFPWSSMRSG
Sbjct: 121 EEGEAKRHWLHEKEPVGIKTYKGFADRGRRRIGGGAETVEPSTKFPWSSMRSG 173

[Close]
BLAST of Carg14224 vs. TrEMBL
Match: tr|A0A2I4GE82|A0A2I4GE82_9ROSI (uncharacterized protein LOC108989236 OS=Juglans regia OX=51240 GN=LOC109007104 PE=4 SV=1)

HSP 1 Score: 255.0 bits (650), Expect = 1.2e-64
Identity = 137/171 (80.12%), Postives = 147/171 (85.96%), Query Frame = 0 

Query: 1   MGSRLGRRVVHFANLPIKLLMPTSFTNITEIALKTIPSASKIEIKRVLESLYGFEVDKVR 60
           MGSRLGRRVVH ANLPIKLLMP++FTNI EIALKTIPSASKIEIKRVLESLYGFEV+KVR
Sbjct: 1   MGSRLGRRVVHMANLPIKLLMPSTFTNIQEIALKTIPSASKIEIKRVLESLYGFEVEKVR 60

Query: 61  TLNMDGKKKKRGGLLIAKPDYKKAYVTLRNPLSISPDVYPIRIIEEDKRNMNKQSKSSIV 120
           TLNM+GKKKKRGGLLIAKPDYKKAYVTLRNPLSISP++YPIRIIEEDKR MN+QSKSS+V
Sbjct: 61  TLNMEGKKKKRGGLLIAKPDYKKAYVTLRNPLSISPEMYPIRIIEEDKRQMNRQSKSSVV 120

Query: 121 EEGEAKRHWLHEKEAVGLKTYKGFADRGRRRIGGAEAVEPSTKFPWSSMRS 172
           EEGE KRHWL EK A   K  + F +RGR    G  A     KFPWSSMRS
Sbjct: 121 EEGEGKRHWLDEK-ARAEKAGERFGNRGRTGQRGDVA-----KFPWSSMRS 165

[Close]
BLAST of Carg14224 vs. TrEMBL
Match: tr|D7T5V5|D7T5V5_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_00s0742g00020 PE=4 SV=1)

HSP 1 Score: 253.1 bits (645), Expect = 4.6e-64
Identity = 129/173 (74.57%), Postives = 146/173 (84.39%), Query Frame = 0 

Query: 1   MGSRLGRRVVHFANLPIKLLMPTSFTNITEIALKTIPSASKIEIKRVLESLYGFEVDKVR 60
           MGSRLGRRV++F NLPIKLLMP+SFTNI EIALKT+PSASKIEIKRVLESLYGFEV+KVR
Sbjct: 1   MGSRLGRRVINFTNLPIKLLMPSSFTNIKEIALKTVPSASKIEIKRVLESLYGFEVEKVR 60

Query: 61  TLNMDGKKKKRGGLLIAKPDYKKAYVTLRNPLSISPDVYPIRIIEEDKRNMNKQSKSSIV 120
           TLNM+GKKKKRGGLLIAKPDYKKAY+TL+NPLSISPD+YPIR+IEE+K+N NKQSKSSIV
Sbjct: 61  TLNMEGKKKKRGGLLIAKPDYKKAYITLKNPLSISPDLYPIRLIEEEKKNTNKQSKSSIV 120

Query: 121 EEGEAKRHWLHEKEAVGLKTYKGFADRGRRRIGGAEAVEPSTKFPWSSMRSGR 174
           EEGEAK HWL  K+    +  K  A+RGR   G       + KFPWS MR+ R
Sbjct: 121 EEGEAKSHWLDGKDGDRFRPEKSSAERGR---GXXXXXXAAAKFPWSGMRASR 170

The following BLAST results are available for this feature:
BLAST of Carg14224 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_023531609.12.6e-90100.00uncharacterized protein LOC111793793 [Cucurbita pepo subsp. pepo][more]
XP_022943267.12.8e-8999.42uncharacterized protein LOC111448049 [Cucurbita moschata][more]
XP_008455593.12.5e-8594.83PREDICTED: uncharacterized protein LOC103495731 isoform X1 [Cucumis melo][more]
XP_004137193.14.2e-8594.25PREDICTED: uncharacterized protein LOC101221365 [Cucumis sativus] >KGN53646.1 hy... [more]
XP_022929525.14.2e-8594.22uncharacterized protein LOC111436066 [Cucurbita moschata][more]
BLAST of Carg14224 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G39880.12.1e-5466.29Ribosomal protein L23/L15e family protein[more]
BLAST of Carg14224 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q605B4|RL23_METCA1.2e-0641.6750S ribosomal protein L23 OS=Methylococcus capsulatus (strain ATCC 33009 / NCIMB... [more]
sp|Q0I161|RL23_HAES11.6e-0642.4750S ribosomal protein L23 OS=Haemophilus somnus (strain 129Pt) OX=205914 GN=rplW... [more]
sp|A0KF23|RL23_AERHH2.0e-0645.7650S ribosomal protein L23 OS=Aeromonas hydrophila subsp. hydrophila (strain ATCC... [more]
sp|A4ST04|RL23_AERS42.7e-0645.7650S ribosomal protein L23 OS=Aeromonas salmonicida (strain A449) OX=382245 GN=rp... [more]
sp|Q0ABH3|RL23_ALKEH2.7e-0645.7650S ribosomal protein L23 OS=Alkalilimnicola ehrlichii (strain ATCC BAA-1101 / D... [more]
BLAST of Carg14224 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3C191|A0A1S3C191_CUCME1.6e-8594.83uncharacterized protein LOC103495731 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10... [more]
tr|A0A0A0L0J2|A0A0A0L0J2_CUCSA2.8e-8594.25Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G095560 PE=4 SV=1[more]
tr|A0A1S4E0P8|A0A1S4E0P8_CUCME6.2e-8594.80uncharacterized protein LOC103495731 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10... [more]
tr|A0A2I4GE82|A0A2I4GE82_9ROSI1.2e-6480.12uncharacterized protein LOC108989236 OS=Juglans regia OX=51240 GN=LOC109007104 P... [more]
tr|D7T5V5|D7T5V5_VITVI4.6e-6474.57Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_00s0742g00020 PE=4 SV=... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0005622intracellular
GO:0005840ribosome
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Vocabulary: INTERPRO
TermDefinition
IPR012678Ribosomal_L23/L15e_core_dom_sf
IPR012677Nucleotide-bd_a/b_plait_sf
IPR013025Ribosomal_L25/23
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0042254 ribosome biogenesis
biological_process GO:0006412 translation
cellular_component GO:0005840 ribosome
cellular_component GO:0005622 intracellular
molecular_function GO:0003735 structural constituent of ribosome
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg14224-RACarg14224-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013025Ribosomal protein L25/L23PFAMPF00276Ribosomal_L23coord: 30..90
e-value: 1.5E-15
score: 57.2
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3DG3DSA:3.30.70.330coord: 4..137
e-value: 7.7E-21
score: 76.7
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 153..173
NoneNo IPR availablePANTHERPTHR12059RIBOSOMAL PROTEIN L23-RELATEDcoord: 6..135
IPR012678Ribosomal protein L23/L15e core domain superfamilySUPERFAMILYSSF54189Ribosomal proteins S24e, L23 and L15ecoord: 26..94

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Carg14224Cla004827Watermelon (97103) v1carwmB0939
Carg14224Csa4G095560Cucumber (Chinese Long) v2carcuB0956
Carg14224MELO3C018951Melon (DHL92) v3.5.1carmeB0925
Carg14224ClCG10G009000Watermelon (Charleston Gray)carwcgB0914
Carg14224CSPI04G08650Wild cucumber (PI 183967)carcpiB0979
Carg14224Cucsa.273070Cucumber (Gy14) v1carcgyB1062
Carg14224CmaCh04G008240Cucurbita maxima (Rimu)carcmaB1288
Carg14224CmoCh04G008810Cucurbita moschata (Rifu)carcmoB1259
Carg14224CmoCh16G007660Cucurbita moschata (Rifu)carcmoB1258
Carg14224Cp4.1LG14g01280Cucurbita pepo (Zucchini)carcpeB1301
Carg14224CsGy4G008480Cucumber (Gy14) v2carcgybB0929
Carg14224MELO3C018951.2Melon (DHL92) v3.6.1carmedB0931
Carg14224CsaV3_4G008860Cucumber (Chinese Long) v3carcucB0981
Carg14224Cla97C10G192200Watermelon (97103) v2carwmbB0988
Carg14224Bhi11G000833Wax gourdcarwgoB1085
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Carg14224Carg05824Silver-seed gourdcarcarB646
The following block(s) are covering this gene:
GeneOrganismBlock
Carg14224Silver-seed gourdcarcarB602
Carg14224Cucumber (Gy14) v2carcgybB0932
Carg14224Cucumber (Gy14) v1carcgyB1058
Carg14224Cucurbita maxima (Rimu)carcmaB1286
Carg14224Cucurbita maxima (Rimu)carcmaB1287
Carg14224Cucurbita maxima (Rimu)carcmaB1289
Carg14224Cucurbita pepo (Zucchini)carcpeB1300
Carg14224Cucurbita pepo (Zucchini)carcpeB1302
Carg14224Cucurbita pepo (Zucchini)carcpeB1304
Carg14224Wild cucumber (PI 183967)carcpiB0982
Carg14224Cucumber (Chinese Long) v2carcuB0959
Carg14224Cucumber (Chinese Long) v3carcucB0987
Carg14224Bottle gourd (USVL1VR-Ls)carlsiB855
Carg14224Bottle gourd (USVL1VR-Ls)carlsiB856
Carg14224Melon (DHL92) v3.5.1carmeB0926
Carg14224Melon (DHL92) v3.6.1carmedB0932
Carg14224Watermelon (Charleston Gray)carwcgB0915
Carg14224Watermelon (97103) v1carwmB0942
Carg14224Watermelon (97103) v2carwmbB0987
Carg14224Wax gourdcarwgoB1088