Carg12289 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGAAGATCCCCTTGTTGTGATAAGGCCAATGTGAAGAAGGGCCCTTGGTCCCCTGAGGAGGATGCCAAGCTCAAGGCTTACATTCACAACCATGGCACTGGTGGCAATTGGATCTCCCTCCCTCAAAAAGCTGGTAAAAAAAAAAAAAAAATCACTTTTTTAGGGTTTTTTTTAGGGTTTTTTAGGGTTTTTTTTTAGGGTTTTTTTAGGGTTTTCAATCTCTAAGTGGGGTTTTTGAGTGTTTTTTTGTGTTTTTCTTGATGGGTTTTCTCTTTTTGTTTGTGGGTATTTGAAGGTTTGAAGAGATGTGGAAAGAGTTGTAGGTTGAGATGGCTTAACTATTTGAGGCCCAACATTAAGCATGGAGGCTTCACTGAGGAAGAAGATAGAATAATTTGTACCCTATTTTCCACTATTGGAAGCAGGTAATTTCTTTGCATGCATTTTTCGTTAAGCTTTTAAGTCGAGCGGTGATTTTTCGAATCTTGTTTAGGGTTTGGATTTAACTAAAGAAACTCGTAGGTGGTCGATAATTGCTACTCAGTTACCGGGAAGAACGGATAACGATATCAAAAATCATTGGAATAGCAAATTGAAGAAGAAACTTATAGGAATGGAGAAACACCCTCAAATCATCCCTCCTACTACAATGCCATATTCTTCTCATCATAATGATCATCAAGTTTCATCATTTCCAGCTCAACCACTCAGTTCAATCCCATCAAATTGGTCAAACAACAACGACAACGACAACGACAACATCGACAACATTAGCCCTTGTCTTGTCCCGACACAAGAATCCAACATGAACAGCTTGTTGAGCTCCTTGATGTTTCAGCATAATCAAACCCTAGATGGAAGAAGCTGCACTCAAATCAACAACACTTCAAGAATCATGATGATGGGGTTTCAGAATCAAACCCATAATTACAATTATTATTATGATGCTATGAATGATGAAGAACATAACAACATATGCTTCAATGGAGGAGGAGGAGGAGGAGATGATGATCATGTTCATAGCACCACCAGCTTGTTCCAATGCATGGAGGGAAATTTCATGAAGTTCTAG ATGGGAAGATCCCCTTGTTGTGATAAGGCCAATGTGAAGAAGGGCCCTTGGTCCCCTGAGGAGGATGCCAAGCTCAAGGCTTACATTCACAACCATGGCACTGGTGGCAATTGGATCTCCCTCCCTCAAAAAGCTGGTTTGAAGAGATGTGGAAAGAGTTGTAGGTTGAGATGGCTTAACTATTTGAGGCCCAACATTAAGCATGGAGGCTTCACTGAGGAAGAAGATAGAATAATTTGTACCCTATTTTCCACTATTGGAAGCAGGTGGTCGATAATTGCTACTCAGTTACCGGGAAGAACGGATAACGATATCAAAAATCATTGGAATAGCAAATTGAAGAAGAAACTTATAGGAATGGAGAAACACCCTCAAATCATCCCTCCTACTACAATGCCATATTCTTCTCATCATAATGATCATCAAGTTTCATCATTTCCAGCTCAACCACTCAGTTCAATCCCATCAAATTGGTCAAACAACAACGACAACGACAACGACAACATCGACAACATTAGCCCTTGTCTTGTCCCGACACAAGAATCCAACATGAACAGCTTGTTGAGCTCCTTGATGTTTCAGCATAATCAAACCCTAGATGGAAGAAGCTGCACTCAAATCAACAACACTTCAAGAATCATGATGATGGGGTTTCAGAATCAAACCCATAATTACAATTATTATTATGATGCTATGAATGATGAAGAACATAACAACATATGCTTCAATGGAGGAGGAGGAGGAGGAGATGATGATCATGTTCATAGCACCACCAGCTTGTTCCAATGCATGGAGGGAAATTTCATGAAGTTCTAG ATGGGAAGATCCCCTTGTTGTGATAAGGCCAATGTGAAGAAGGGCCCTTGGTCCCCTGAGGAGGATGCCAAGCTCAAGGCTTACATTCACAACCATGGCACTGGTGGCAATTGGATCTCCCTCCCTCAAAAAGCTGGTTTGAAGAGATGTGGAAAGAGTTGTAGGTTGAGATGGCTTAACTATTTGAGGCCCAACATTAAGCATGGAGGCTTCACTGAGGAAGAAGATAGAATAATTTGTACCCTATTTTCCACTATTGGAAGCAGGTGGTCGATAATTGCTACTCAGTTACCGGGAAGAACGGATAACGATATCAAAAATCATTGGAATAGCAAATTGAAGAAGAAACTTATAGGAATGGAGAAACACCCTCAAATCATCCCTCCTACTACAATGCCATATTCTTCTCATCATAATGATCATCAAGTTTCATCATTTCCAGCTCAACCACTCAGTTCAATCCCATCAAATTGGTCAAACAACAACGACAACGACAACGACAACATCGACAACATTAGCCCTTGTCTTGTCCCGACACAAGAATCCAACATGAACAGCTTGTTGAGCTCCTTGATGTTTCAGCATAATCAAACCCTAGATGGAAGAAGCTGCACTCAAATCAACAACACTTCAAGAATCATGATGATGGGGTTTCAGAATCAAACCCATAATTACAATTATTATTATGATGCTATGAATGATGAAGAACATAACAACATATGCTTCAATGGAGGAGGAGGAGGAGGAGATGATGATCATGTTCATAGCACCACCAGCTTGTTCCAATGCATGGAGGGAAATTTCATGAAGTTCTAG MGRSPCCDKANVKKGPWSPEEDAKLKAYIHNHGTGGNWISLPQKAGLKRCGKSCRLRWLNYLRPNIKHGGFTEEEDRIICTLFSTIGSRWSIIATQLPGRTDNDIKNHWNSKLKKKLIGMEKHPQIIPPTTMPYSSHHNDHQVSSFPAQPLSSIPSNWSNNNDNDNDNIDNISPCLVPTQESNMNSLLSSLMFQHNQTLDGRSCTQINNTSRIMMMGFQNQTHNYNYYYDAMNDEEHNNICFNGGGGGGDDDHVHSTTSLFQCMEGNFMKF
BLAST of Carg12289 vs. NCBI nr
Match: XP_022948843.1 (transcription factor MYB36-like [Cucurbita moschata]) HSP 1 Score: 481.1 bits (1237), Expect = 2.5e-132 Identity = 271/271 (100.00%), Postives = 271/271 (100.00%), Query Frame = 0
BLAST of Carg12289 vs. NCBI nr
Match: XP_023524586.1 (transcription factor MYB36-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 463.8 bits (1192), Expect = 4.1e-127 Identity = 264/272 (97.06%), Postives = 266/272 (97.79%), Query Frame = 0
BLAST of Carg12289 vs. NCBI nr
Match: XP_022998892.1 (transcription factor MYB36-like [Cucurbita maxima]) HSP 1 Score: 458.4 bits (1178), Expect = 1.7e-125 Identity = 255/274 (93.07%), Postives = 256/274 (93.43%), Query Frame = 0
BLAST of Carg12289 vs. NCBI nr
Match: XP_022964958.1 (transcription factor MYB87-like [Cucurbita moschata]) HSP 1 Score: 290.4 bits (742), Expect = 6.2e-75 Identity = 157/249 (63.05%), Postives = 176/249 (70.68%), Query Frame = 0
BLAST of Carg12289 vs. NCBI nr
Match: XP_023520293.1 (transcription factor MYB87-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 288.9 bits (738), Expect = 1.8e-74 Identity = 156/250 (62.40%), Postives = 175/250 (70.00%), Query Frame = 0
BLAST of Carg12289 vs. TAIR10
Match: AT3G49690.1 (myb domain protein 84) HSP 1 Score: 235.7 bits (600), Expect = 3.3e-62 Identity = 102/122 (83.61%), Postives = 114/122 (93.44%), Query Frame = 0
BLAST of Carg12289 vs. TAIR10
Match: AT5G65790.1 (myb domain protein 68) HSP 1 Score: 233.8 bits (595), Expect = 1.3e-61 Identity = 101/122 (82.79%), Postives = 112/122 (91.80%), Query Frame = 0
BLAST of Carg12289 vs. TAIR10
Match: AT5G57620.1 (myb domain protein 36) HSP 1 Score: 233.4 bits (594), Expect = 1.6e-61 Identity = 102/122 (83.61%), Postives = 113/122 (92.62%), Query Frame = 0
BLAST of Carg12289 vs. TAIR10
Match: AT4G37780.1 (myb domain protein 87) HSP 1 Score: 222.6 bits (566), Expect = 2.9e-58 Identity = 95/121 (78.51%), Postives = 109/121 (90.08%), Query Frame = 0
BLAST of Carg12289 vs. TAIR10
Match: AT2G36890.1 (Duplicated homeodomain-like superfamily protein) HSP 1 Score: 213.8 bits (543), Expect = 1.3e-55 Identity = 92/114 (80.70%), Postives = 103/114 (90.35%), Query Frame = 0
BLAST of Carg12289 vs. Swiss-Prot
Match: sp|Q9M2Y9|RAX3_ARATH (Transcription factor RAX3 OS=Arabidopsis thaliana OX=3702 GN=RAX3 PE=2 SV=1) HSP 1 Score: 235.7 bits (600), Expect = 5.9e-61 Identity = 102/122 (83.61%), Postives = 114/122 (93.44%), Query Frame = 0
BLAST of Carg12289 vs. Swiss-Prot
Match: sp|Q9FKL2|MYB36_ARATH (Transcription factor MYB36 OS=Arabidopsis thaliana OX=3702 GN=MYB36 PE=1 SV=1) HSP 1 Score: 233.4 bits (594), Expect = 2.9e-60 Identity = 102/122 (83.61%), Postives = 113/122 (92.62%), Query Frame = 0
BLAST of Carg12289 vs. Swiss-Prot
Match: sp|F4JSU0|MYB87_ARATH (Transcription factor MYB87 OS=Arabidopsis thaliana OX=3702 GN=MYB87 PE=2 SV=1) HSP 1 Score: 222.6 bits (566), Expect = 5.2e-57 Identity = 95/121 (78.51%), Postives = 109/121 (90.08%), Query Frame = 0
BLAST of Carg12289 vs. Swiss-Prot
Match: sp|Q9SJL7|RAX2_ARATH (Transcription factor RAX2 OS=Arabidopsis thaliana OX=3702 GN=RAX2 PE=1 SV=1) HSP 1 Score: 213.8 bits (543), Expect = 2.4e-54 Identity = 92/114 (80.70%), Postives = 103/114 (90.35%), Query Frame = 0
BLAST of Carg12289 vs. Swiss-Prot
Match: sp|Q9FG68|RAX1_ARATH (Transcription factor RAX1 OS=Arabidopsis thaliana OX=3702 GN=RAX1 PE=1 SV=1) HSP 1 Score: 212.2 bits (539), Expect = 7.0e-54 Identity = 91/116 (78.45%), Postives = 103/116 (88.79%), Query Frame = 0
BLAST of Carg12289 vs. TrEMBL
Match: tr|A0A0A0LUZ6|A0A0A0LUZ6_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G109320 PE=4 SV=1) HSP 1 Score: 280.8 bits (717), Expect = 3.3e-72 Identity = 160/277 (57.76%), Postives = 178/277 (64.26%), Query Frame = 0
BLAST of Carg12289 vs. TrEMBL
Match: tr|A0A2N9EYF9|A0A2N9EYF9_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS7662 PE=4 SV=1) HSP 1 Score: 251.9 bits (642), Expect = 1.6e-63 Identity = 115/153 (75.16%), Postives = 129/153 (84.31%), Query Frame = 0
BLAST of Carg12289 vs. TrEMBL
Match: tr|A0A2P4M0T2|A0A2P4M0T2_QUESU (Transcription factor myb36 OS=Quercus suber OX=58331 GN=CFP56_33206 PE=4 SV=1) HSP 1 Score: 246.9 bits (629), Expect = 5.2e-62 Identity = 130/226 (57.52%), Postives = 153/226 (67.70%), Query Frame = 0
BLAST of Carg12289 vs. TrEMBL
Match: tr|A0A061GYH8|A0A061GYH8_THECC (Myb domain protein 36, putative OS=Theobroma cacao OX=3641 GN=TCM_042012 PE=4 SV=1) HSP 1 Score: 246.5 bits (628), Expect = 6.8e-62 Identity = 116/154 (75.32%), Postives = 130/154 (84.42%), Query Frame = 0
BLAST of Carg12289 vs. TrEMBL
Match: tr|A0A1U8MJA5|A0A1U8MJA5_GOSHI (transcription factor RAX3-like OS=Gossypium hirsutum OX=3635 GN=LOC107938316 PE=4 SV=1) HSP 1 Score: 246.1 bits (627), Expect = 8.9e-62 Identity = 111/146 (76.03%), Postives = 125/146 (85.62%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
|