CSPI01G13370 (gene) Wild cucumber (PI 183967)

NameCSPI01G13370
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionMyb transcription factor
LocationChr1 : 8842689 .. 8844306 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGAAGATCTCCTTGTTGTGATAAGAGTAATGTGAAGAAGGGTCCTTGGTCTCCTGAAGAAGATGCTAAGCTCAAGGATTTTATTGACAAAAATGGCACTGGTGGAAATTGGATCTCTCTCCCCCAAAAAGCTGGTAATTTTAGGGTGTTAGGGTTTTGAATCTGTTATTTTCCCTTCTTCTTACCATAAAGGTAGGGAGATCACAATGTTAAATAATTGTATTACTCGTACGGTTTTCTTTGTTTAAGTGGGGTTTTTTAAGTCTCTTTTTTAGATCTCTCTTTGTAAAATGAGTGTTTTTTCTTTTTCATTGCATTTGTGGGTGAGGTGTGATGAGGGTGCAGGATGTATAAACTTAGTTGAGATATGTCGGTTAATTTCTCTTTCTATTTTGTTAAAATAATAATAGTAGTCATAATACTAAAATTGTTTTTTCTTTCTTTCATGTTTTGTGGATTATTATGGAAGGTTTGAAGAGATGTGGGAAGAGTTGCAGGTTGAGATGGCTTAACTATTTGAGGCCTAACATTAAACATGGAGGATTCACTGATGAGGAAGATAGAATAATTTGTACTCTTTTTTCCACTATTGGAAGCAGGTACATTTATTTATATAATCTTGATTAATATTTTATTAATCACTTAACCTTCTTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTTTTCTTTTTTTGTAGATTTTATTTATTCTTCTTCTTTATGCATTTCTACATTATTATTATCTTCTTATGTTTAGAATAGTGTGTATAAACAATTAAATTTAGGCTAACCAAGCTTACTTAAACATTACATAACAATGTATATATAAGCATTTGCTTATATGGATCTAGCTTGAGAATTTACAGGTGGTTGATAATGTATATTTGATTTCTTCAAAAAACAAGTAACTTTAACGAAATTTTTTTAGGATTTTTCCCTTTCATCTTCTTGTGGATCTAGCTTGAGAATTTATAGGTGGTTGATATATCTCACGAGTGAAAGATCGAGTAAGCTTTTCTTAGGGTTTTTGTTTCTCTTTCTTTCTTTTTCTGGATCTAGCTTGAGATCGATCAAATTCGCAGGTGGTCAATAATCGCAACGCAATTACCGGGAAGAACGGACAATGACATAAAGAATCATTGGAATAGCAAGCTAAAGAGGAAGCTTATAGAAATGGAGAAGAAAGCCCAAATAACCACATCCAGAACCATACCATCTTCACATAATCATCATCATCATCAAATTTTCTCATCATTTTCATCTCAACCACTCTCATCCCTAATCAACAAACATGATGACTACTTCAATGATATTAATTATTCCAATTATAACCTTTCCTCCCCTCCAACAACAATCAAAAGCTTTGAATCTCTCATTTCATCAATCCCATCAAATTGGTCAAACAACAATAATAACATTAGCCCTAGCCCCTGTCTTGTCCAAACACAAGAAACAACCAACTTATTGAGTAGTAATTCCTTGATGTATAATCATCATAATCCATTGGTACAAATGAAAGAAAGCTGCTTATTAGGGTTTGGAAGTGAAGGAAGTTGCAGTTCAAGTACTTCTGATGGAAGAAGCTACACTCAAATCAACACCACTTCAGGGATAA

mRNA sequence

ATGGGAAGATCTCCTTGTTGTGATAAGAGTAATGTGAAGAAGGGTCCTTGGTCTCCTGAAGAAGATGCTAAGCTCAAGGATTTTATTGACAAAAATGGCACTGGTGGAAATTGGATCTCTCTCCCCCAAAAAGCTGGTTTGAAGAGATGTGGGAAGAGTTGCAGGTTGAGATGGCTTAACTATTTGAGGCCTAACATTAAACATGGAGGATTCACTGATGAGGAAGATAGAATAATTTGTACTCTTTTTTCCACTATTGGAAGCAGGTGGTCAATAATCGCAACGCAATTACCGGGAAGAACGGACAATGACATAAAGAATCATTGGAATAGCAAGCTAAAGAGGAAGCTTATAGAAATGGAGAAGAAAGCCCAAATAACCACATCCAGAACCATACCATCTTCACATAATCATCATCATCATCAAATTTTCTCATCATTTTCATCTCAACCACTCTCATCCCTAATCAACAAACATGATGACTACTTCAATGATATTAATTATTCCAATTATAACCTTTCCTCCCCTCCAACAACAATCAAAAGCTTTGAATCTCTCATTTCATCAATCCCATCAAATTGGTCAAACAACAATAATAACATTAGCCCTAGCCCCTGTCTTGGTTTGGAAGTGAAGGAAGTTGCAGTTCAAGTACTTCTGATGGAAGAAGCTACACTCAAATCAACACCACTTCAGGGATAA

Coding sequence (CDS)

ATGGGAAGATCTCCTTGTTGTGATAAGAGTAATGTGAAGAAGGGTCCTTGGTCTCCTGAAGAAGATGCTAAGCTCAAGGATTTTATTGACAAAAATGGCACTGGTGGAAATTGGATCTCTCTCCCCCAAAAAGCTGGTTTGAAGAGATGTGGGAAGAGTTGCAGGTTGAGATGGCTTAACTATTTGAGGCCTAACATTAAACATGGAGGATTCACTGATGAGGAAGATAGAATAATTTGTACTCTTTTTTCCACTATTGGAAGCAGGTGGTCAATAATCGCAACGCAATTACCGGGAAGAACGGACAATGACATAAAGAATCATTGGAATAGCAAGCTAAAGAGGAAGCTTATAGAAATGGAGAAGAAAGCCCAAATAACCACATCCAGAACCATACCATCTTCACATAATCATCATCATCATCAAATTTTCTCATCATTTTCATCTCAACCACTCTCATCCCTAATCAACAAACATGATGACTACTTCAATGATATTAATTATTCCAATTATAACCTTTCCTCCCCTCCAACAACAATCAAAAGCTTTGAATCTCTCATTTCATCAATCCCATCAAATTGGTCAAACAACAATAATAACATTAGCCCTAGCCCCTGTCTTGGTTTGGAAGTGAAGGAAGTTGCAGTTCAAGTACTTCTGATGGAAGAAGCTACACTCAAATCAACACCACTTCAGGGATAA
BLAST of CSPI01G13370 vs. Swiss-Prot
Match: MYB36_ARATH (Transcription factor MYB36 OS=Arabidopsis thaliana GN=MYB36 PE=1 SV=1)

HSP 1 Score: 229.9 bits (585), Expect = 2.8e-59
Identity = 105/144 (72.92%), Postives = 125/144 (86.81%), Query Frame = 1

Query: 1   MGRSPCCDKSNVKKGPWSPEEDAKLKDFIDKNGTGGNWISLPQKAGLKRCGKSCRLRWLN 60
           MGR+PCCDK+NVKKGPWSPEED KLKD+IDK GTGGNWI+LPQK GLKRCGKSCRLRWLN
Sbjct: 1   MGRAPCCDKANVKKGPWSPEEDVKLKDYIDKYGTGGNWIALPQKIGLKRCGKSCRLRWLN 60

Query: 61  YLRPNIKHGGFTDEEDRIICTLFSTIGSRWSIIATQLPGRTDNDIKNHWNSKLKRKLI-- 120
           YLRPNIKHGGF++EEDRII +L+ +IGSRWSIIA QLPGRTDNDIKN+WN+KLK+KL+  
Sbjct: 61  YLRPNIKHGGFSEEEDRIILSLYISIGSRWSIIAAQLPGRTDNDIKNYWNTKLKKKLLGR 120

Query: 121 --EMEKKAQITTSRTIPSSHNHHH 141
             +M ++  IT S     S+N+++
Sbjct: 121 QKQMNRQDSITDSTENNLSNNNNN 144

BLAST of CSPI01G13370 vs. Swiss-Prot
Match: RAX3_ARATH (Transcription factor RAX3 OS=Arabidopsis thaliana GN=RAX3 PE=2 SV=1)

HSP 1 Score: 228.4 bits (581), Expect = 8.1e-59
Identity = 103/152 (67.76%), Postives = 123/152 (80.92%), Query Frame = 1

Query: 1   MGRSPCCDKSNVKKGPWSPEEDAKLKDFIDKNGTGGNWISLPQKAGLKRCGKSCRLRWLN 60
           MGR+PCCDK+NVKKGPWSPEEDAKLK +I+ +GTGGNWI+LPQK GLKRCGKSCRLRWLN
Sbjct: 1   MGRAPCCDKANVKKGPWSPEEDAKLKSYIENSGTGGNWIALPQKIGLKRCGKSCRLRWLN 60

Query: 61  YLRPNIKHGGFTDEEDRIICTLFSTIGSRWSIIATQLPGRTDNDIKNHWNSKLKRKLI-- 120
           YLRPNIKHGGF++EE+ IIC+L+ TIGSRWSIIA QLPGRTDNDIKN+WN++LK+KLI  
Sbjct: 61  YLRPNIKHGGFSEEEENIICSLYLTIGSRWSIIAAQLPGRTDNDIKNYWNTRLKKKLINK 120

Query: 121 ---EMEKKAQITTSRTIPSSHNHHHHQIFSSF 148
              E+++         +     H   QI +SF
Sbjct: 121 QRKELQEACMEQQEMMVMMKRQHQQQQIQTSF 152

BLAST of CSPI01G13370 vs. Swiss-Prot
Match: RAX2_ARATH (Transcription factor RAX2 OS=Arabidopsis thaliana GN=RAX2 PE=1 SV=1)

HSP 1 Score: 220.7 bits (561), Expect = 1.7e-56
Identity = 108/167 (64.67%), Postives = 127/167 (76.05%), Query Frame = 1

Query: 1   MGRSPCCDKSNVKKGPWSPEEDAKLKDFIDKNGTGGNWISLPQKAGLKRCGKSCRLRWLN 60
           MGR+PCCDK+NVK+GPWSPEEDAKLKD+I+K GTGGNWI+LP KAGL+RCGKSCRLRWLN
Sbjct: 1   MGRAPCCDKANVKRGPWSPEEDAKLKDYIEKQGTGGNWIALPHKAGLRRCGKSCRLRWLN 60

Query: 61  YLRPNIKHGGFTDEEDRIICTLFSTIGSRWSIIATQLPGRTDNDIKNHWNSKLKRKLIEM 120
           YLRPNI+HG FT+EED II +LF++IGSRWS+IA  L GRTDNDIKN+WN+KLK+KL   
Sbjct: 61  YLRPNIRHGDFTEEEDNIIYSLFASIGSRWSVIAAHLQGRTDNDIKNYWNTKLKKKL--- 120

Query: 121 EKKAQITTSRTIPSSHNHHHHQIFSSFSSQPLSSLINKHDDYFNDIN 168
                I T    P    HHH  I +S SS   SS       ++N IN
Sbjct: 121 -----IATMAPPP----HHHLAIATSSSSASPSS-----SSHYNMIN 150

BLAST of CSPI01G13370 vs. Swiss-Prot
Match: RAX1_ARATH (Transcription factor RAX1 OS=Arabidopsis thaliana GN=RAX1 PE=2 SV=1)

HSP 1 Score: 209.1 bits (531), Expect = 5.1e-53
Identity = 112/212 (52.83%), Postives = 148/212 (69.81%), Query Frame = 1

Query: 1   MGRSPCCDKSNVKKGPWSPEEDAKLKDFIDKNGTGGNWISLPQKAGLKRCGKSCRLRWLN 60
           MGR+PCCDK+ VK+GPWSPEED+KL+D+I+K G GGNWIS P KAGL+RCGKSCRLRWLN
Sbjct: 1   MGRAPCCDKTKVKRGPWSPEEDSKLRDYIEKYGNGGNWISFPLKAGLRRCGKSCRLRWLN 60

Query: 61  YLRPNIKHGGFTDEEDRIICTLFSTIGSRWSIIATQLPGRTDNDIKNHWNSKLKRKLIEM 120
           YLRPNIKHG F++EEDRII +LF+ IGSRWSIIA  LPGRTDNDIKN+WN+KL++KL+  
Sbjct: 61  YLRPNIKHGDFSEEEDRIIFSLFAAIGSRWSIIAAHLPGRTDNDIKNYWNTKLRKKLL-- 120

Query: 121 EKKAQITTSRTIPSSHNHHHHQIFSSFSSQPLSSLINKHDDYFNDINYSNYNLSSPPTTI 180
              +  ++S  + S + +   Q     +S P +   + ++ Y    N + Y   S  ++I
Sbjct: 121 -SSSSDSSSSAMASPYLNPISQDVKRPTS-PTTIPSSSYNPYAE--NPNQYPTKSLISSI 180

Query: 181 KSFES----LISSIPSNW------SNNNNNIS 203
             FE+    +IS I  N+      S++NNN S
Sbjct: 181 NGFEAGDKQIISYINPNYPQDLYLSDSNNNTS 206

BLAST of CSPI01G13370 vs. Swiss-Prot
Match: MYB80_ARATH (Transcription factor MYB80 OS=Arabidopsis thaliana GN=MYB80 PE=1 SV=1)

HSP 1 Score: 180.6 bits (457), Expect = 1.9e-44
Identity = 92/183 (50.27%), Postives = 119/183 (65.03%), Query Frame = 1

Query: 1   MGRSPCCDKSNVKKGPWSPEEDAKLKDFIDKNGTGGNWISLPQKAGLKRCGKSCRLRWLN 60
           MGR PCC+K NVK+G W+PEED KL  +I ++GT  NW  +P+ AGL+RCGKSCRLRW N
Sbjct: 1   MGRIPCCEKENVKRGQWTPEEDNKLASYIAQHGTR-NWRLIPKNAGLQRCGKSCRLRWTN 60

Query: 61  YLRPNIKHGGFTDEEDRIICTLFSTIGSRWSIIATQLPGRTDNDIKNHWNSKLKRKLIEM 120
           YLRP++KHG F++ E+ II    S +G+RWS+IA QLPGRTDND+KN+WN+KLK+KL  M
Sbjct: 61  YLRPDLKHGQFSEAEEHIIVKFHSVLGNRWSLIAAQLPGRTDNDVKNYWNTKLKKKLSGM 120

Query: 121 -----------EKKAQITTSRTIPSSHNHHHHQIFSSFSSQPLSSLINKHDDYFNDINYS 173
                         A+ITT+   P   +H        F  + L  L  K  D  N IN+S
Sbjct: 121 GIDPVTHKPFSHLMAEITTTLN-PPQVSHLAEAALGCFKDEMLHLLTKKRVD-LNQINFS 180

BLAST of CSPI01G13370 vs. TrEMBL
Match: A0A0A0LUZ6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G109320 PE=4 SV=1)

HSP 1 Score: 436.4 bits (1121), Expect = 2.2e-119
Identity = 207/207 (100.00%), Postives = 207/207 (100.00%), Query Frame = 1

Query: 1   MGRSPCCDKSNVKKGPWSPEEDAKLKDFIDKNGTGGNWISLPQKAGLKRCGKSCRLRWLN 60
           MGRSPCCDKSNVKKGPWSPEEDAKLKDFIDKNGTGGNWISLPQKAGLKRCGKSCRLRWLN
Sbjct: 1   MGRSPCCDKSNVKKGPWSPEEDAKLKDFIDKNGTGGNWISLPQKAGLKRCGKSCRLRWLN 60

Query: 61  YLRPNIKHGGFTDEEDRIICTLFSTIGSRWSIIATQLPGRTDNDIKNHWNSKLKRKLIEM 120
           YLRPNIKHGGFTDEEDRIICTLFSTIGSRWSIIATQLPGRTDNDIKNHWNSKLKRKLIEM
Sbjct: 61  YLRPNIKHGGFTDEEDRIICTLFSTIGSRWSIIATQLPGRTDNDIKNHWNSKLKRKLIEM 120

Query: 121 EKKAQITTSRTIPSSHNHHHHQIFSSFSSQPLSSLINKHDDYFNDINYSNYNLSSPPTTI 180
           EKKAQITTSRTIPSSHNHHHHQIFSSFSSQPLSSLINKHDDYFNDINYSNYNLSSPPTTI
Sbjct: 121 EKKAQITTSRTIPSSHNHHHHQIFSSFSSQPLSSLINKHDDYFNDINYSNYNLSSPPTTI 180

Query: 181 KSFESLISSIPSNWSNNNNNISPSPCL 208
           KSFESLISSIPSNWSNNNNNISPSPCL
Sbjct: 181 KSFESLISSIPSNWSNNNNNISPSPCL 207

BLAST of CSPI01G13370 vs. TrEMBL
Match: V4UEI6_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10028804mg PE=4 SV=1)

HSP 1 Score: 251.5 bits (641), Expect = 9.9e-64
Identity = 126/205 (61.46%), Postives = 150/205 (73.17%), Query Frame = 1

Query: 1   MGRSPCCDKSNVKKGPWSPEEDAKLKDFIDKNGTGGNWISLPQKAGLKRCGKSCRLRWLN 60
           MGR+PCCDK+NVKKGPWSPEED+KLK++I+K GTGGNWI+LPQKAGLKRCGKSCRLRWLN
Sbjct: 1   MGRAPCCDKANVKKGPWSPEEDSKLKEYIEKYGTGGNWIALPQKAGLKRCGKSCRLRWLN 60

Query: 61  YLRPNIKHGGFTDEEDRIICTLFSTIGSRWSIIATQLPGRTDNDIKNHWNSKLKRKLIEM 120
           YLRPNIKHG FTDEEDR+IC+LF++IGSRWSIIA QLPGRTDNDIKN+WN+KLK+KL+ M
Sbjct: 61  YLRPNIKHGEFTDEEDRLICSLFASIGSRWSIIAAQLPGRTDNDIKNYWNTKLKKKLMAM 120

Query: 121 ----EKKAQITTSRTIPSSHNHHHHQIFSSFSSQPLSSLINKHDDYFNDINYSNYNLSSP 180
                 + + T    IPSSH HHH  + S   SQP                Y+  N S  
Sbjct: 121 APPLSSQKKSTAPPLIPSSH-HHHQALVSLLPSQPY---------------YTPSNKSLI 180

Query: 181 PTTIKSFESLISSIPSNWSNNNNNI 202
             +  SFE + S+ P +  +NNN I
Sbjct: 181 SNSFDSFEPISSNTPLHLFDNNNLI 189

BLAST of CSPI01G13370 vs. TrEMBL
Match: A0A067FAN8_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g019787mg PE=4 SV=1)

HSP 1 Score: 251.5 bits (641), Expect = 9.9e-64
Identity = 126/205 (61.46%), Postives = 150/205 (73.17%), Query Frame = 1

Query: 1   MGRSPCCDKSNVKKGPWSPEEDAKLKDFIDKNGTGGNWISLPQKAGLKRCGKSCRLRWLN 60
           MGR+PCCDK+NVKKGPWSPEED+KLK++I+K GTGGNWI+LPQKAGLKRCGKSCRLRWLN
Sbjct: 1   MGRAPCCDKANVKKGPWSPEEDSKLKEYIEKYGTGGNWIALPQKAGLKRCGKSCRLRWLN 60

Query: 61  YLRPNIKHGGFTDEEDRIICTLFSTIGSRWSIIATQLPGRTDNDIKNHWNSKLKRKLIEM 120
           YLRPNIKHG FTDEEDR+IC+LF++IGSRWSIIA QLPGRTDNDIKN+WN+KLK+KL+ M
Sbjct: 61  YLRPNIKHGEFTDEEDRLICSLFASIGSRWSIIAAQLPGRTDNDIKNYWNTKLKKKLMAM 120

Query: 121 ----EKKAQITTSRTIPSSHNHHHHQIFSSFSSQPLSSLINKHDDYFNDINYSNYNLSSP 180
                 + + T    IPSSH HHH  + S   SQP                Y+  N S  
Sbjct: 121 APPLSSQKKSTAPPLIPSSH-HHHQALVSLLPSQPY---------------YTPSNKSLI 180

Query: 181 PTTIKSFESLISSIPSNWSNNNNNI 202
             +  SFE + S+ P +  +NNN I
Sbjct: 181 SNSFDSFEPISSNTPLHLFDNNNLI 189

BLAST of CSPI01G13370 vs. TrEMBL
Match: W5C4H7_WHEAT (Uncharacterized protein OS=Triticum aestivum PE=4 SV=1)

HSP 1 Score: 245.0 bits (624), Expect = 9.3e-62
Identity = 121/210 (57.62%), Postives = 151/210 (71.90%), Query Frame = 1

Query: 1   MGRSPCCDKSNVKKGPWSPEEDAKLKDFIDKNGTGGNWISLPQKAGLKRCGKSCRLRWLN 60
           MGR+PCCDK+NVKKGPWSPEEDAKLK+F+DK+GTGGNWI+LPQKAGL+RCGKSCRLRWLN
Sbjct: 1   MGRAPCCDKNNVKKGPWSPEEDAKLKEFMDKHGTGGNWIALPQKAGLRRCGKSCRLRWLN 60

Query: 61  YLRPNIKHGGFTDEEDRIICTLFSTIGSRWSIIATQLPGRTDNDIKNHWNSKLKRKLIEM 120
           YLRPNIKHG FT+ EDR+IC+++++IGSRWSIIA+QLPGRTDNDIKN+WN+KLK+KL+  
Sbjct: 61  YLRPNIKHGEFTEHEDRVICSMYASIGSRWSIIASQLPGRTDNDIKNYWNTKLKKKLLGS 120

Query: 121 EKKAQITTSRTIPSSHNHHHHQIFSSFSSQPLSSLINKHDDYFNDINYSNY--------N 180
              A +      P  ++H H  +   +SS P S             NYSN+         
Sbjct: 121 TTMAGVGPPPRAPRQNHHQHRPVLLPYSSSPHS-------------NYSNFFPGAGALLQ 180

Query: 181 LSSPPTTIKSFE--SLISSIPSNWSNNNNN 201
            S+ P T+++ +   L SS   N  NNNNN
Sbjct: 181 QSAEPLTLQAQDHYMLGSSGSLNHMNNNNN 197

BLAST of CSPI01G13370 vs. TrEMBL
Match: M5VYV6_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa007823mg PE=4 SV=1)

HSP 1 Score: 245.0 bits (624), Expect = 9.3e-62
Identity = 129/215 (60.00%), Postives = 153/215 (71.16%), Query Frame = 1

Query: 1   MGRSPCCDKSNVKKGPWSPEEDAKLKDFIDKNGTGGNWISLPQKAGLKRCGKSCRLRWLN 60
           MGR+PCCDK+NVKKGPWSPEED+KLK++I+K GTGGNWI+LPQKAGLKRCGKSCRLRWLN
Sbjct: 1   MGRAPCCDKANVKKGPWSPEEDSKLKEYIEKQGTGGNWIALPQKAGLKRCGKSCRLRWLN 60

Query: 61  YLRPNIKHGGFTDEEDRIICTLFSTIGSRWSIIATQLPGRTDNDIKNHWNSKLKRKLIEM 120
           YLRPNIKHG F+DEEDRIIC+LF++IGSRWSIIA QLPGRTDNDIKN+WN+KLK+KL+ M
Sbjct: 61  YLRPNIKHGEFSDEEDRIICSLFASIGSRWSIIAAQLPGRTDNDIKNYWNTKLKKKLMGM 120

Query: 121 EKKAQITTSRTIPSSHNHHHHQIFSSFSSQPLSSLINKHDDYFNDINYSNYNLSS----- 180
                       P SH+HHHHQ  +S    P  S  + H +Y N     +  LSS     
Sbjct: 121 ---------HMAPPSHHHHHHQ-RNSLKPPPFPS--SSHHNYQNQPLIPSQPLSSLFKDL 180

Query: 181 PPTTIKSFES-----LISSIPSNWSNNNNNISPSP 206
             T  +SF S      +S   +N+SN   N S  P
Sbjct: 181 GSTYNRSFSSGFEIPHLSMTSNNFSNTTTNSSLFP 203

BLAST of CSPI01G13370 vs. TAIR10
Match: AT5G65790.1 (AT5G65790.1 myb domain protein 68)

HSP 1 Score: 231.1 bits (588), Expect = 7.0e-61
Identity = 98/123 (79.67%), Postives = 115/123 (93.50%), Query Frame = 1

Query: 1   MGRSPCCDKSNVKKGPWSPEEDAKLKDFIDKNGTGGNWISLPQKAGLKRCGKSCRLRWLN 60
           MGR+PCCDK+NVKKGPWSPEEDAKLKD+I+ +GTGGNWI+LPQK GL+RCGKSCRLRWLN
Sbjct: 1   MGRAPCCDKANVKKGPWSPEEDAKLKDYIENSGTGGNWIALPQKIGLRRCGKSCRLRWLN 60

Query: 61  YLRPNIKHGGFTDEEDRIICTLFSTIGSRWSIIATQLPGRTDNDIKNHWNSKLKRKLIEM 120
           YLRPNIKHGGF++EED IIC L+ TIGSRWSIIA QLPGRTDNDIKN+WN++LK+KL+  
Sbjct: 61  YLRPNIKHGGFSEEEDNIICNLYVTIGSRWSIIAAQLPGRTDNDIKNYWNTRLKKKLLNK 120

Query: 121 EKK 124
           ++K
Sbjct: 121 QRK 123

BLAST of CSPI01G13370 vs. TAIR10
Match: AT5G57620.1 (AT5G57620.1 myb domain protein 36)

HSP 1 Score: 229.9 bits (585), Expect = 1.6e-60
Identity = 105/144 (72.92%), Postives = 125/144 (86.81%), Query Frame = 1

Query: 1   MGRSPCCDKSNVKKGPWSPEEDAKLKDFIDKNGTGGNWISLPQKAGLKRCGKSCRLRWLN 60
           MGR+PCCDK+NVKKGPWSPEED KLKD+IDK GTGGNWI+LPQK GLKRCGKSCRLRWLN
Sbjct: 1   MGRAPCCDKANVKKGPWSPEEDVKLKDYIDKYGTGGNWIALPQKIGLKRCGKSCRLRWLN 60

Query: 61  YLRPNIKHGGFTDEEDRIICTLFSTIGSRWSIIATQLPGRTDNDIKNHWNSKLKRKLI-- 120
           YLRPNIKHGGF++EEDRII +L+ +IGSRWSIIA QLPGRTDNDIKN+WN+KLK+KL+  
Sbjct: 61  YLRPNIKHGGFSEEEDRIILSLYISIGSRWSIIAAQLPGRTDNDIKNYWNTKLKKKLLGR 120

Query: 121 --EMEKKAQITTSRTIPSSHNHHH 141
             +M ++  IT S     S+N+++
Sbjct: 121 QKQMNRQDSITDSTENNLSNNNNN 144

BLAST of CSPI01G13370 vs. TAIR10
Match: AT3G49690.1 (AT3G49690.1 myb domain protein 84)

HSP 1 Score: 228.4 bits (581), Expect = 4.5e-60
Identity = 103/152 (67.76%), Postives = 123/152 (80.92%), Query Frame = 1

Query: 1   MGRSPCCDKSNVKKGPWSPEEDAKLKDFIDKNGTGGNWISLPQKAGLKRCGKSCRLRWLN 60
           MGR+PCCDK+NVKKGPWSPEEDAKLK +I+ +GTGGNWI+LPQK GLKRCGKSCRLRWLN
Sbjct: 1   MGRAPCCDKANVKKGPWSPEEDAKLKSYIENSGTGGNWIALPQKIGLKRCGKSCRLRWLN 60

Query: 61  YLRPNIKHGGFTDEEDRIICTLFSTIGSRWSIIATQLPGRTDNDIKNHWNSKLKRKLI-- 120
           YLRPNIKHGGF++EE+ IIC+L+ TIGSRWSIIA QLPGRTDNDIKN+WN++LK+KLI  
Sbjct: 61  YLRPNIKHGGFSEEEENIICSLYLTIGSRWSIIAAQLPGRTDNDIKNYWNTRLKKKLINK 120

Query: 121 ---EMEKKAQITTSRTIPSSHNHHHHQIFSSF 148
              E+++         +     H   QI +SF
Sbjct: 121 QRKELQEACMEQQEMMVMMKRQHQQQQIQTSF 152

BLAST of CSPI01G13370 vs. TAIR10
Match: AT4G37780.1 (AT4G37780.1 myb domain protein 87)

HSP 1 Score: 221.5 bits (563), Expect = 5.5e-58
Identity = 105/164 (64.02%), Postives = 129/164 (78.66%), Query Frame = 1

Query: 1   MGRSPCCDKSNVKKGPWSPEEDAKLKDFIDKNGTGGNWISLPQKAGLKRCGKSCRLRWLN 60
           MGR+PCCDK  VKKGPWS EEDA LK +I+K+GTG NWISLPQ+ G+KRCGKSCRLRWLN
Sbjct: 1   MGRAPCCDKMAVKKGPWSTEEDAVLKSYIEKHGTGNNWISLPQRIGIKRCGKSCRLRWLN 60

Query: 61  YLRPNIKHGGFTDEEDRIICTLFSTIGSRWSIIATQLPGRTDNDIKNHWNSKLKRKLIEM 120
           YLRPN+KHGGFTDEED IIC+L+ TIGSRWSIIA+QLPGRTDNDIKN+WN++LK+KL+  
Sbjct: 61  YLRPNLKHGGFTDEEDYIICSLYITIGSRWSIIASQLPGRTDNDIKNYWNTRLKKKLLSK 120

Query: 121 EKKA---QITTS---RTIPSSHNHHHHQIFSSFSSQPLSSLINK 159
           + KA   Q+       T  SS + +  QIF   +++   +L N+
Sbjct: 121 QGKAFHQQLNVKFERGTTSSSSSQNQIQIFHDENTKSNQTLYNQ 164

BLAST of CSPI01G13370 vs. TAIR10
Match: AT2G36890.1 (AT2G36890.1 Duplicated homeodomain-like superfamily protein)

HSP 1 Score: 220.7 bits (561), Expect = 9.5e-58
Identity = 108/167 (64.67%), Postives = 127/167 (76.05%), Query Frame = 1

Query: 1   MGRSPCCDKSNVKKGPWSPEEDAKLKDFIDKNGTGGNWISLPQKAGLKRCGKSCRLRWLN 60
           MGR+PCCDK+NVK+GPWSPEEDAKLKD+I+K GTGGNWI+LP KAGL+RCGKSCRLRWLN
Sbjct: 1   MGRAPCCDKANVKRGPWSPEEDAKLKDYIEKQGTGGNWIALPHKAGLRRCGKSCRLRWLN 60

Query: 61  YLRPNIKHGGFTDEEDRIICTLFSTIGSRWSIIATQLPGRTDNDIKNHWNSKLKRKLIEM 120
           YLRPNI+HG FT+EED II +LF++IGSRWS+IA  L GRTDNDIKN+WN+KLK+KL   
Sbjct: 61  YLRPNIRHGDFTEEEDNIIYSLFASIGSRWSVIAAHLQGRTDNDIKNYWNTKLKKKL--- 120

Query: 121 EKKAQITTSRTIPSSHNHHHHQIFSSFSSQPLSSLINKHDDYFNDIN 168
                I T    P    HHH  I +S SS   SS       ++N IN
Sbjct: 121 -----IATMAPPP----HHHLAIATSSSSASPSS-----SSHYNMIN 150

BLAST of CSPI01G13370 vs. NCBI nr
Match: gi|700209713|gb|KGN64809.1| (hypothetical protein Csa_1G109320 [Cucumis sativus])

HSP 1 Score: 436.4 bits (1121), Expect = 3.1e-119
Identity = 207/207 (100.00%), Postives = 207/207 (100.00%), Query Frame = 1

Query: 1   MGRSPCCDKSNVKKGPWSPEEDAKLKDFIDKNGTGGNWISLPQKAGLKRCGKSCRLRWLN 60
           MGRSPCCDKSNVKKGPWSPEEDAKLKDFIDKNGTGGNWISLPQKAGLKRCGKSCRLRWLN
Sbjct: 1   MGRSPCCDKSNVKKGPWSPEEDAKLKDFIDKNGTGGNWISLPQKAGLKRCGKSCRLRWLN 60

Query: 61  YLRPNIKHGGFTDEEDRIICTLFSTIGSRWSIIATQLPGRTDNDIKNHWNSKLKRKLIEM 120
           YLRPNIKHGGFTDEEDRIICTLFSTIGSRWSIIATQLPGRTDNDIKNHWNSKLKRKLIEM
Sbjct: 61  YLRPNIKHGGFTDEEDRIICTLFSTIGSRWSIIATQLPGRTDNDIKNHWNSKLKRKLIEM 120

Query: 121 EKKAQITTSRTIPSSHNHHHHQIFSSFSSQPLSSLINKHDDYFNDINYSNYNLSSPPTTI 180
           EKKAQITTSRTIPSSHNHHHHQIFSSFSSQPLSSLINKHDDYFNDINYSNYNLSSPPTTI
Sbjct: 121 EKKAQITTSRTIPSSHNHHHHQIFSSFSSQPLSSLINKHDDYFNDINYSNYNLSSPPTTI 180

Query: 181 KSFESLISSIPSNWSNNNNNISPSPCL 208
           KSFESLISSIPSNWSNNNNNISPSPCL
Sbjct: 181 KSFESLISSIPSNWSNNNNNISPSPCL 207

BLAST of CSPI01G13370 vs. NCBI nr
Match: gi|659072274|ref|XP_008464692.1| (PREDICTED: transcription factor RAX2-like [Cucumis melo])

HSP 1 Score: 410.2 bits (1053), Expect = 2.4e-111
Identity = 202/210 (96.19%), Postives = 202/210 (96.19%), Query Frame = 1

Query: 1   MGRSPCCDKSNVKKGPWSPEEDAKLKDFIDKNGTGGNWISLPQKAGLKRCGKSCRLRWLN 60
           MGRSPCCDKSNVKKGPWSPEEDAKLKDFIDKNGTGGNWISLPQKAGLKRCGKSCRLRWLN
Sbjct: 1   MGRSPCCDKSNVKKGPWSPEEDAKLKDFIDKNGTGGNWISLPQKAGLKRCGKSCRLRWLN 60

Query: 61  YLRPNIKHGGFTDEEDRIICTLFSTIGSRWSIIATQLPGRTDNDIKNHWNSKLKRKLIEM 120
           YLRPNIKHGGFTDEEDRIICTLFSTIGSRWSIIATQLPGRTDNDIKNHWNSKLKRKLIEM
Sbjct: 61  YLRPNIKHGGFTDEEDRIICTLFSTIGSRWSIIATQLPGRTDNDIKNHWNSKLKRKLIEM 120

Query: 121 EKKAQITTSRTIPSSHN-HHHHQIFSSFSSQPLSSLINKHDDYFNDINYSNYNLSSPP-- 180
           EKKAQITT  TIPSS N HHHHQ FSSFSSQPLSSLINKHDDYFNDINYSNYNLSSPP  
Sbjct: 121 EKKAQITT--TIPSSQNHHHHHQTFSSFSSQPLSSLINKHDDYFNDINYSNYNLSSPPST 180

Query: 181 TTIKSFESLISSIPSNWSNNNNNISPSPCL 208
           TTIKSFESLISSIPSNWSNNNNNIS SPCL
Sbjct: 181 TTIKSFESLISSIPSNWSNNNNNISHSPCL 208

BLAST of CSPI01G13370 vs. NCBI nr
Match: gi|567863640|ref|XP_006424474.1| (hypothetical protein CICLE_v10028804mg [Citrus clementina])

HSP 1 Score: 251.5 bits (641), Expect = 1.4e-63
Identity = 126/205 (61.46%), Postives = 150/205 (73.17%), Query Frame = 1

Query: 1   MGRSPCCDKSNVKKGPWSPEEDAKLKDFIDKNGTGGNWISLPQKAGLKRCGKSCRLRWLN 60
           MGR+PCCDK+NVKKGPWSPEED+KLK++I+K GTGGNWI+LPQKAGLKRCGKSCRLRWLN
Sbjct: 1   MGRAPCCDKANVKKGPWSPEEDSKLKEYIEKYGTGGNWIALPQKAGLKRCGKSCRLRWLN 60

Query: 61  YLRPNIKHGGFTDEEDRIICTLFSTIGSRWSIIATQLPGRTDNDIKNHWNSKLKRKLIEM 120
           YLRPNIKHG FTDEEDR+IC+LF++IGSRWSIIA QLPGRTDNDIKN+WN+KLK+KL+ M
Sbjct: 61  YLRPNIKHGEFTDEEDRLICSLFASIGSRWSIIAAQLPGRTDNDIKNYWNTKLKKKLMAM 120

Query: 121 ----EKKAQITTSRTIPSSHNHHHHQIFSSFSSQPLSSLINKHDDYFNDINYSNYNLSSP 180
                 + + T    IPSSH HHH  + S   SQP                Y+  N S  
Sbjct: 121 APPLSSQKKSTAPPLIPSSH-HHHQALVSLLPSQPY---------------YTPSNKSLI 180

Query: 181 PTTIKSFESLISSIPSNWSNNNNNI 202
             +  SFE + S+ P +  +NNN I
Sbjct: 181 SNSFDSFEPISSNTPLHLFDNNNLI 189

BLAST of CSPI01G13370 vs. NCBI nr
Match: gi|595825644|ref|XP_007205438.1| (hypothetical protein PRUPE_ppa007823mg [Prunus persica])

HSP 1 Score: 245.0 bits (624), Expect = 1.3e-61
Identity = 129/215 (60.00%), Postives = 153/215 (71.16%), Query Frame = 1

Query: 1   MGRSPCCDKSNVKKGPWSPEEDAKLKDFIDKNGTGGNWISLPQKAGLKRCGKSCRLRWLN 60
           MGR+PCCDK+NVKKGPWSPEED+KLK++I+K GTGGNWI+LPQKAGLKRCGKSCRLRWLN
Sbjct: 1   MGRAPCCDKANVKKGPWSPEEDSKLKEYIEKQGTGGNWIALPQKAGLKRCGKSCRLRWLN 60

Query: 61  YLRPNIKHGGFTDEEDRIICTLFSTIGSRWSIIATQLPGRTDNDIKNHWNSKLKRKLIEM 120
           YLRPNIKHG F+DEEDRIIC+LF++IGSRWSIIA QLPGRTDNDIKN+WN+KLK+KL+ M
Sbjct: 61  YLRPNIKHGEFSDEEDRIICSLFASIGSRWSIIAAQLPGRTDNDIKNYWNTKLKKKLMGM 120

Query: 121 EKKAQITTSRTIPSSHNHHHHQIFSSFSSQPLSSLINKHDDYFNDINYSNYNLSS----- 180
                       P SH+HHHHQ  +S    P  S  + H +Y N     +  LSS     
Sbjct: 121 ---------HMAPPSHHHHHHQ-RNSLKPPPFPS--SSHHNYQNQPLIPSQPLSSLFKDL 180

Query: 181 PPTTIKSFES-----LISSIPSNWSNNNNNISPSP 206
             T  +SF S      +S   +N+SN   N S  P
Sbjct: 181 GSTYNRSFSSGFEIPHLSMTSNNFSNTTTNSSLFP 203

BLAST of CSPI01G13370 vs. NCBI nr
Match: gi|460402243|ref|XP_004246623.1| (PREDICTED: transcription factor RAX2 [Solanum lycopersicum])

HSP 1 Score: 244.6 bits (623), Expect = 1.7e-61
Identity = 118/187 (63.10%), Postives = 148/187 (79.14%), Query Frame = 1

Query: 1   MGRSPCCDKSNVKKGPWSPEEDAKLKDFIDKNGTGGNWISLPQKAGLKRCGKSCRLRWLN 60
           MGR+PCCDK+NVKKGPWSPEEDAKLK++IDK GTGGNWI+LPQKAGL+RCGKSCRLRWLN
Sbjct: 1   MGRAPCCDKANVKKGPWSPEEDAKLKEYIDKFGTGGNWIALPQKAGLRRCGKSCRLRWLN 60

Query: 61  YLRPNIKHGGFTDEEDRIICTLFSTIGSRWSIIATQLPGRTDNDIKNHWNSKLKRKLIEM 120
           YLRPNIKHG F+DEEDRIIC+L++ IGSRWSIIA QLPGRTDNDIKN+WN+KLK+KL+  
Sbjct: 61  YLRPNIKHGEFSDEEDRIICSLYANIGSRWSIIAAQLPGRTDNDIKNYWNTKLKKKLMGF 120

Query: 121 EKKAQITTSRTI-PSSHNHHHHQI----FSSFSSQPLSSLINKHDDYFNDINYSNYNLSS 180
                +++S  I P +H+ +HHQI    ++++SS   +S +    +Y N+  +  Y  + 
Sbjct: 121 -----VSSSHKIRPLNHHDYHHQIPTNCYNNYSSLVQASSLLISSNYPNNTTFPCYETNI 180

Query: 181 PPTTIKS 183
           P TT  S
Sbjct: 181 PSTTPSS 182

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
MYB36_ARATH2.8e-5972.92Transcription factor MYB36 OS=Arabidopsis thaliana GN=MYB36 PE=1 SV=1[more]
RAX3_ARATH8.1e-5967.76Transcription factor RAX3 OS=Arabidopsis thaliana GN=RAX3 PE=2 SV=1[more]
RAX2_ARATH1.7e-5664.67Transcription factor RAX2 OS=Arabidopsis thaliana GN=RAX2 PE=1 SV=1[more]
RAX1_ARATH5.1e-5352.83Transcription factor RAX1 OS=Arabidopsis thaliana GN=RAX1 PE=2 SV=1[more]
MYB80_ARATH1.9e-4450.27Transcription factor MYB80 OS=Arabidopsis thaliana GN=MYB80 PE=1 SV=1[more]
Match NameE-valueIdentityDescription
A0A0A0LUZ6_CUCSA2.2e-119100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_1G109320 PE=4 SV=1[more]
V4UEI6_9ROSI9.9e-6461.46Uncharacterized protein OS=Citrus clementina GN=CICLE_v10028804mg PE=4 SV=1[more]
A0A067FAN8_CITSI9.9e-6461.46Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g019787mg PE=4 SV=1[more]
W5C4H7_WHEAT9.3e-6257.62Uncharacterized protein OS=Triticum aestivum PE=4 SV=1[more]
M5VYV6_PRUPE9.3e-6260.00Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa007823mg PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT5G65790.17.0e-6179.67 myb domain protein 68[more]
AT5G57620.11.6e-6072.92 myb domain protein 36[more]
AT3G49690.14.5e-6067.76 myb domain protein 84[more]
AT4G37780.15.5e-5864.02 myb domain protein 87[more]
AT2G36890.19.5e-5864.67 Duplicated homeodomain-like superfamily protein[more]
Match NameE-valueIdentityDescription
gi|700209713|gb|KGN64809.1|3.1e-119100.00hypothetical protein Csa_1G109320 [Cucumis sativus][more]
gi|659072274|ref|XP_008464692.1|2.4e-11196.19PREDICTED: transcription factor RAX2-like [Cucumis melo][more]
gi|567863640|ref|XP_006424474.1|1.4e-6361.46hypothetical protein CICLE_v10028804mg [Citrus clementina][more]
gi|595825644|ref|XP_007205438.1|1.3e-6160.00hypothetical protein PRUPE_ppa007823mg [Prunus persica][more]
gi|460402243|ref|XP_004246623.1|1.7e-6163.10PREDICTED: transcription factor RAX2 [Solanum lycopersicum][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001005SANT/Myb
IPR009057Homeobox-like_sf
IPR017930Myb_dom
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003677 DNA binding

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI01G13370.1CSPI01G13370.1mRNA


Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001005SANT/Myb domainPFAMPF00249Myb_DNA-bindingcoord: 69..111
score: 3.4E-11coord: 14..62
score: 2.4
IPR001005SANT/Myb domainSMARTSM00717santcoord: 67..115
score: 1.6E-11coord: 13..64
score: 1.1
IPR009057Homeodomain-likeGENE3DG3DSA:1.10.10.60coord: 70..118
score: 5.7E-23coord: 15..69
score: 1.5
IPR009057Homeodomain-likeunknownSSF46689Homeodomain-likecoord: 11..109
score: 8.2
IPR017930Myb domainPROFILEPS51294HTH_MYBcoord: 63..117
score: 22.498coord: 9..62
score: 1
NoneNo IPR availableunknownCoilCoilcoord: 110..130
scor
NoneNo IPR availablePANTHERPTHR10641MYB-LIKE DNA-BINDING PROTEIN MYBcoord: 1..202
score: 3.7E
NoneNo IPR availablePANTHERPTHR10641:SF506SUBFAMILY NOT NAMEDcoord: 1..202
score: 3.7E

The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
CSPI01G13370CSPI03G33430Wild cucumber (PI 183967)cpicpiB017
The following block(s) are covering this gene:
GeneOrganismBlock
CSPI01G13370Wax gourdcpiwgoB017
CSPI01G13370Wax gourdcpiwgoB049
CSPI01G13370Cucurbita pepo (Zucchini)cpecpiB518
CSPI01G13370Cucurbita pepo (Zucchini)cpecpiB530
CSPI01G13370Silver-seed gourdcarcpiB1105