CSPI01G13370 (gene) Wild cucumber (PI 183967)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGAAGATCTCCTTGTTGTGATAAGAGTAATGTGAAGAAGGGTCCTTGGTCTCCTGAAGAAGATGCTAAGCTCAAGGATTTTATTGACAAAAATGGCACTGGTGGAAATTGGATCTCTCTCCCCCAAAAAGCTGGTAATTTTAGGGTGTTAGGGTTTTGAATCTGTTATTTTCCCTTCTTCTTACCATAAAGGTAGGGAGATCACAATGTTAAATAATTGTATTACTCGTACGGTTTTCTTTGTTTAAGTGGGGTTTTTTAAGTCTCTTTTTTAGATCTCTCTTTGTAAAATGAGTGTTTTTTCTTTTTCATTGCATTTGTGGGTGAGGTGTGATGAGGGTGCAGGATGTATAAACTTAGTTGAGATATGTCGGTTAATTTCTCTTTCTATTTTGTTAAAATAATAATAGTAGTCATAATACTAAAATTGTTTTTTCTTTCTTTCATGTTTTGTGGATTATTATGGAAGGTTTGAAGAGATGTGGGAAGAGTTGCAGGTTGAGATGGCTTAACTATTTGAGGCCTAACATTAAACATGGAGGATTCACTGATGAGGAAGATAGAATAATTTGTACTCTTTTTTCCACTATTGGAAGCAGGTACATTTATTTATATAATCTTGATTAATATTTTATTAATCACTTAACCTTCTTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTTTTCTTTTTTTGTAGATTTTATTTATTCTTCTTCTTTATGCATTTCTACATTATTATTATCTTCTTATGTTTAGAATAGTGTGTATAAACAATTAAATTTAGGCTAACCAAGCTTACTTAAACATTACATAACAATGTATATATAAGCATTTGCTTATATGGATCTAGCTTGAGAATTTACAGGTGGTTGATAATGTATATTTGATTTCTTCAAAAAACAAGTAACTTTAACGAAATTTTTTTAGGATTTTTCCCTTTCATCTTCTTGTGGATCTAGCTTGAGAATTTATAGGTGGTTGATATATCTCACGAGTGAAAGATCGAGTAAGCTTTTCTTAGGGTTTTTGTTTCTCTTTCTTTCTTTTTCTGGATCTAGCTTGAGATCGATCAAATTCGCAGGTGGTCAATAATCGCAACGCAATTACCGGGAAGAACGGACAATGACATAAAGAATCATTGGAATAGCAAGCTAAAGAGGAAGCTTATAGAAATGGAGAAGAAAGCCCAAATAACCACATCCAGAACCATACCATCTTCACATAATCATCATCATCATCAAATTTTCTCATCATTTTCATCTCAACCACTCTCATCCCTAATCAACAAACATGATGACTACTTCAATGATATTAATTATTCCAATTATAACCTTTCCTCCCCTCCAACAACAATCAAAAGCTTTGAATCTCTCATTTCATCAATCCCATCAAATTGGTCAAACAACAATAATAACATTAGCCCTAGCCCCTGTCTTGTCCAAACACAAGAAACAACCAACTTATTGAGTAGTAATTCCTTGATGTATAATCATCATAATCCATTGGTACAAATGAAAGAAAGCTGCTTATTAGGGTTTGGAAGTGAAGGAAGTTGCAGTTCAAGTACTTCTGATGGAAGAAGCTACACTCAAATCAACACCACTTCAGGGATAA ATGGGAAGATCTCCTTGTTGTGATAAGAGTAATGTGAAGAAGGGTCCTTGGTCTCCTGAAGAAGATGCTAAGCTCAAGGATTTTATTGACAAAAATGGCACTGGTGGAAATTGGATCTCTCTCCCCCAAAAAGCTGGTTTGAAGAGATGTGGGAAGAGTTGCAGGTTGAGATGGCTTAACTATTTGAGGCCTAACATTAAACATGGAGGATTCACTGATGAGGAAGATAGAATAATTTGTACTCTTTTTTCCACTATTGGAAGCAGGTGGTCAATAATCGCAACGCAATTACCGGGAAGAACGGACAATGACATAAAGAATCATTGGAATAGCAAGCTAAAGAGGAAGCTTATAGAAATGGAGAAGAAAGCCCAAATAACCACATCCAGAACCATACCATCTTCACATAATCATCATCATCATCAAATTTTCTCATCATTTTCATCTCAACCACTCTCATCCCTAATCAACAAACATGATGACTACTTCAATGATATTAATTATTCCAATTATAACCTTTCCTCCCCTCCAACAACAATCAAAAGCTTTGAATCTCTCATTTCATCAATCCCATCAAATTGGTCAAACAACAATAATAACATTAGCCCTAGCCCCTGTCTTGGTTTGGAAGTGAAGGAAGTTGCAGTTCAAGTACTTCTGATGGAAGAAGCTACACTCAAATCAACACCACTTCAGGGATAA ATGGGAAGATCTCCTTGTTGTGATAAGAGTAATGTGAAGAAGGGTCCTTGGTCTCCTGAAGAAGATGCTAAGCTCAAGGATTTTATTGACAAAAATGGCACTGGTGGAAATTGGATCTCTCTCCCCCAAAAAGCTGGTTTGAAGAGATGTGGGAAGAGTTGCAGGTTGAGATGGCTTAACTATTTGAGGCCTAACATTAAACATGGAGGATTCACTGATGAGGAAGATAGAATAATTTGTACTCTTTTTTCCACTATTGGAAGCAGGTGGTCAATAATCGCAACGCAATTACCGGGAAGAACGGACAATGACATAAAGAATCATTGGAATAGCAAGCTAAAGAGGAAGCTTATAGAAATGGAGAAGAAAGCCCAAATAACCACATCCAGAACCATACCATCTTCACATAATCATCATCATCATCAAATTTTCTCATCATTTTCATCTCAACCACTCTCATCCCTAATCAACAAACATGATGACTACTTCAATGATATTAATTATTCCAATTATAACCTTTCCTCCCCTCCAACAACAATCAAAAGCTTTGAATCTCTCATTTCATCAATCCCATCAAATTGGTCAAACAACAATAATAACATTAGCCCTAGCCCCTGTCTTGGTTTGGAAGTGAAGGAAGTTGCAGTTCAAGTACTTCTGATGGAAGAAGCTACACTCAAATCAACACCACTTCAGGGATAA
BLAST of CSPI01G13370 vs. Swiss-Prot
Match: MYB36_ARATH (Transcription factor MYB36 OS=Arabidopsis thaliana GN=MYB36 PE=1 SV=1) HSP 1 Score: 229.9 bits (585), Expect = 2.8e-59 Identity = 105/144 (72.92%), Postives = 125/144 (86.81%), Query Frame = 1
BLAST of CSPI01G13370 vs. Swiss-Prot
Match: RAX3_ARATH (Transcription factor RAX3 OS=Arabidopsis thaliana GN=RAX3 PE=2 SV=1) HSP 1 Score: 228.4 bits (581), Expect = 8.1e-59 Identity = 103/152 (67.76%), Postives = 123/152 (80.92%), Query Frame = 1
BLAST of CSPI01G13370 vs. Swiss-Prot
Match: RAX2_ARATH (Transcription factor RAX2 OS=Arabidopsis thaliana GN=RAX2 PE=1 SV=1) HSP 1 Score: 220.7 bits (561), Expect = 1.7e-56 Identity = 108/167 (64.67%), Postives = 127/167 (76.05%), Query Frame = 1
BLAST of CSPI01G13370 vs. Swiss-Prot
Match: RAX1_ARATH (Transcription factor RAX1 OS=Arabidopsis thaliana GN=RAX1 PE=2 SV=1) HSP 1 Score: 209.1 bits (531), Expect = 5.1e-53 Identity = 112/212 (52.83%), Postives = 148/212 (69.81%), Query Frame = 1
BLAST of CSPI01G13370 vs. Swiss-Prot
Match: MYB80_ARATH (Transcription factor MYB80 OS=Arabidopsis thaliana GN=MYB80 PE=1 SV=1) HSP 1 Score: 180.6 bits (457), Expect = 1.9e-44 Identity = 92/183 (50.27%), Postives = 119/183 (65.03%), Query Frame = 1
BLAST of CSPI01G13370 vs. TrEMBL
Match: A0A0A0LUZ6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G109320 PE=4 SV=1) HSP 1 Score: 436.4 bits (1121), Expect = 2.2e-119 Identity = 207/207 (100.00%), Postives = 207/207 (100.00%), Query Frame = 1
BLAST of CSPI01G13370 vs. TrEMBL
Match: V4UEI6_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10028804mg PE=4 SV=1) HSP 1 Score: 251.5 bits (641), Expect = 9.9e-64 Identity = 126/205 (61.46%), Postives = 150/205 (73.17%), Query Frame = 1
BLAST of CSPI01G13370 vs. TrEMBL
Match: A0A067FAN8_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g019787mg PE=4 SV=1) HSP 1 Score: 251.5 bits (641), Expect = 9.9e-64 Identity = 126/205 (61.46%), Postives = 150/205 (73.17%), Query Frame = 1
BLAST of CSPI01G13370 vs. TrEMBL
Match: W5C4H7_WHEAT (Uncharacterized protein OS=Triticum aestivum PE=4 SV=1) HSP 1 Score: 245.0 bits (624), Expect = 9.3e-62 Identity = 121/210 (57.62%), Postives = 151/210 (71.90%), Query Frame = 1
BLAST of CSPI01G13370 vs. TrEMBL
Match: M5VYV6_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa007823mg PE=4 SV=1) HSP 1 Score: 245.0 bits (624), Expect = 9.3e-62 Identity = 129/215 (60.00%), Postives = 153/215 (71.16%), Query Frame = 1
BLAST of CSPI01G13370 vs. TAIR10
Match: AT5G65790.1 (AT5G65790.1 myb domain protein 68) HSP 1 Score: 231.1 bits (588), Expect = 7.0e-61 Identity = 98/123 (79.67%), Postives = 115/123 (93.50%), Query Frame = 1
BLAST of CSPI01G13370 vs. TAIR10
Match: AT5G57620.1 (AT5G57620.1 myb domain protein 36) HSP 1 Score: 229.9 bits (585), Expect = 1.6e-60 Identity = 105/144 (72.92%), Postives = 125/144 (86.81%), Query Frame = 1
BLAST of CSPI01G13370 vs. TAIR10
Match: AT3G49690.1 (AT3G49690.1 myb domain protein 84) HSP 1 Score: 228.4 bits (581), Expect = 4.5e-60 Identity = 103/152 (67.76%), Postives = 123/152 (80.92%), Query Frame = 1
BLAST of CSPI01G13370 vs. TAIR10
Match: AT4G37780.1 (AT4G37780.1 myb domain protein 87) HSP 1 Score: 221.5 bits (563), Expect = 5.5e-58 Identity = 105/164 (64.02%), Postives = 129/164 (78.66%), Query Frame = 1
BLAST of CSPI01G13370 vs. TAIR10
Match: AT2G36890.1 (AT2G36890.1 Duplicated homeodomain-like superfamily protein) HSP 1 Score: 220.7 bits (561), Expect = 9.5e-58 Identity = 108/167 (64.67%), Postives = 127/167 (76.05%), Query Frame = 1
BLAST of CSPI01G13370 vs. NCBI nr
Match: gi|700209713|gb|KGN64809.1| (hypothetical protein Csa_1G109320 [Cucumis sativus]) HSP 1 Score: 436.4 bits (1121), Expect = 3.1e-119 Identity = 207/207 (100.00%), Postives = 207/207 (100.00%), Query Frame = 1
BLAST of CSPI01G13370 vs. NCBI nr
Match: gi|659072274|ref|XP_008464692.1| (PREDICTED: transcription factor RAX2-like [Cucumis melo]) HSP 1 Score: 410.2 bits (1053), Expect = 2.4e-111 Identity = 202/210 (96.19%), Postives = 202/210 (96.19%), Query Frame = 1
BLAST of CSPI01G13370 vs. NCBI nr
Match: gi|567863640|ref|XP_006424474.1| (hypothetical protein CICLE_v10028804mg [Citrus clementina]) HSP 1 Score: 251.5 bits (641), Expect = 1.4e-63 Identity = 126/205 (61.46%), Postives = 150/205 (73.17%), Query Frame = 1
BLAST of CSPI01G13370 vs. NCBI nr
Match: gi|595825644|ref|XP_007205438.1| (hypothetical protein PRUPE_ppa007823mg [Prunus persica]) HSP 1 Score: 245.0 bits (624), Expect = 1.3e-61 Identity = 129/215 (60.00%), Postives = 153/215 (71.16%), Query Frame = 1
BLAST of CSPI01G13370 vs. NCBI nr
Match: gi|460402243|ref|XP_004246623.1| (PREDICTED: transcription factor RAX2 [Solanum lycopersicum]) HSP 1 Score: 244.6 bits (623), Expect = 1.7e-61 Identity = 118/187 (63.10%), Postives = 148/187 (79.14%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
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