CsGy1G013470 (gene) Cucumber (Gy14) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsGy1G013470
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v2)
Description	myb domain protein 68
Location	Chr1 : 8851440 .. 8852759 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAGGTTTGAAGAGATGTGGGAAGAGTTGCAGGTTGAGATGGCTTAACTATTTGAGGCCTAACATTAAACATGGAGGATTCACTGATGAGGAAGATAGAATAATTTGTACTCTTTTTTCCACTATTGGAAGCAGGTACATTTATTTATATAATCTTGATTAATATTTTATTAATCACTTAACCTTCTTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTTTTCTTTTTTGTAGATTTTATTTATTCTTCTTCTTTATGCATTTCTACATTATTATTATCTTCTTATGTTTAGAATAGTGTGTATAAACAATTAAATTTACCCTAACCAAGCTTACTTAAACATTACATAACAATGTATATATAAGCATTTGCTTATATGGATCTAGCTTGAGAATTTACAGGTGGTTGATAATGTATATTTGATTTCTTCAAAAAACAAGTAACTTTAACGAAATTTTTTTAGGATTTTTCCCTTTCATCTTCTTGTGGATCTAGCTTGAGAATTTATAGGTGGTTGATATATCTCACGAGTGAAAGATCGAGTAAGCTTTTCTTAGGGTTTTTTTTTCTCTTTCTTTCTTTTTCTGGATCTAGCTTGAGATCGATCAAATTCGCAGGTGGTCAATAATCGCAACGCAATTACCGGGAAGAACGGACAATGACATAAAGAATCATTGGAATAGCAAGCTAAAGAGGAAGCTTATAGAAATGGAGAAGAAAGCCCAAATAACCACATCCAGAACCATACCATCTTCACATAATCATCATCATCATCAAATTTTCTCATCATTTTCATCTCAACCACTCTCATCCCTAATCAACAAACATGATGACTACTTCAATGATATTAATTATTCCAATTATAACCTTTCCTCCCCTCCAACAACAATCAAAAGCTTTGAATCTCTCATTTCATCAATCCCATCAAATTGGTCAAACAACAATAATAACATTAGCCCTAGCCCCTGTCTTGTCCAAACACAAGAAACAACCAACTTATTGAGTAGTAATTCCTTGATGTATAATCATCATAATCCATTGGTACAAATGAAAGAAAGCTGCTTATTAGGGTTTGGAAGTGAAGGAAGTTGCAGTTCAAGTACTTCTGATGGAAGAAGCTACACTCAAATCAACACCACTTCAGGGATAATGGGATTTCAAAATAATAATAATAATAATAACCCTAATTATTATTATTATTATTCTGATAATATTATGAATTATATTAATCATCAACCAGCTGCTAATCTTGAGTACTCTTACATGGAGGATGAAAACAAAACATTACTAGAAAATTTCATGTACTGA

mRNA sequence

ATGGAAGGTTTGAAGAGATGTGGGAAGAGTTGCAGGTTGAGATGGCTTAACTATTTGAGGCCTAACATTAAACATGGAGGATTCACTGATGAGGAAGATAGAATAATTTGTACTCTTTTTTCCACTATTGGAAGCAGGTGGTTGATATATCTCACGAGTGAAAGATCGAGTAAGCTTTTCTTAGGGTGGTCAATAATCGCAACGCAATTACCGGGAAGAACGGACAATGACATAAAGAATCATTGGAATAGCAAGCTAAAGAGGAAGCTTATAGAAATGGAGAAGAAAGCCCAAATAACCACATCCAGAACCATACCATCTTCACATAATCATCATCATCATCAAATTTTCTCATCATTTTCATCTCAACCACTCTCATCCCTAATCAACAAACATGATGACTACTTCAATGATATTAATTATTCCAATTATAACCTTTCCTCCCCTCCAACAACAATCAAAAGCTTTGAATCTCTCATTTCATCAATCCCATCAAATTGGTCAAACAACAATAATAACATTAGCCCTAGCCCCTGTCTTGTCCAAACACAAGAAACAACCAACTTATTGAGTAGTAATTCCTTGATGTATAATCATCATAATCCATTGGTACAAATGAAAGAAAGCTGCTTATTAGGGTTTGGAAGTGAAGGAAGTTGCAGTTCAAGTACTTCTGATGGAAGAAGCTACACTCAAATCAACACCACTTCAGGGATAATGGGATTTCAAAATAATAATAATAATAATAACCCTAATTATTATTATTATTATTCTGATAATATTATGAATTATATTAATCATCAACCAGCTGCTAATCTTGAGTACTCTTACATGGAGGATGAAAACAAAACATTACTAGAAAATTTCATGTACTGA

Coding sequence (CDS)

ATGGAAGGTTTGAAGAGATGTGGGAAGAGTTGCAGGTTGAGATGGCTTAACTATTTGAGGCCTAACATTAAACATGGAGGATTCACTGATGAGGAAGATAGAATAATTTGTACTCTTTTTTCCACTATTGGAAGCAGGTGGTTGATATATCTCACGAGTGAAAGATCGAGTAAGCTTTTCTTAGGGTGGTCAATAATCGCAACGCAATTACCGGGAAGAACGGACAATGACATAAAGAATCATTGGAATAGCAAGCTAAAGAGGAAGCTTATAGAAATGGAGAAGAAAGCCCAAATAACCACATCCAGAACCATACCATCTTCACATAATCATCATCATCATCAAATTTTCTCATCATTTTCATCTCAACCACTCTCATCCCTAATCAACAAACATGATGACTACTTCAATGATATTAATTATTCCAATTATAACCTTTCCTCCCCTCCAACAACAATCAAAAGCTTTGAATCTCTCATTTCATCAATCCCATCAAATTGGTCAAACAACAATAATAACATTAGCCCTAGCCCCTGTCTTGTCCAAACACAAGAAACAACCAACTTATTGAGTAGTAATTCCTTGATGTATAATCATCATAATCCATTGGTACAAATGAAAGAAAGCTGCTTATTAGGGTTTGGAAGTGAAGGAAGTTGCAGTTCAAGTACTTCTGATGGAAGAAGCTACACTCAAATCAACACCACTTCAGGGATAATGGGATTTCAAAATAATAATAATAATAATAACCCTAATTATTATTATTATTATTCTGATAATATTATGAATTATATTAATCATCAACCAGCTGCTAATCTTGAGTACTCTTACATGGAGGATGAAAACAAAACATTACTAGAAAATTTCATGTACTGA

Protein sequence

MEGLKRCGKSCRLRWLNYLRPNIKHGGFTDEEDRIICTLFSTIGSRWLIYLTSERSSKLFLGWSIIATQLPGRTDNDIKNHWNSKLKRKLIEMEKKAQITTSRTIPSSHNHHHHQIFSSFSSQPLSSLINKHDDYFNDINYSNYNLSSPPTTIKSFESLISSIPSNWSNNNNNISPSPCLVQTQETTNLLSSNSLMYNHHNPLVQMKESCLLGFGSEGSCSSSTSDGRSYTQINTTSGIMGFQNNNNNNNPNYYYYYSDNIMNYINHQPAANLEYSYMEDENKTLLENFMY

Homology

[Close]

BLAST of CsGy1G013470 vs. NCBI nr
Match: KGN64809.1 (hypothetical protein Csa_1G109320 [Cucumis sativus])

HSP 1 Score: 475.3 bits (1222), Expect = 1.5e-130
Identity = 273/289 (94.46%), Postives = 273/289 (94.46%), Query Frame = 0


Query: 3   GLKRCGKSCRLRWLNYLRPNIKHGGFTDEEDRIICTLFSTIGSRWLIYLTSERSSKLFLG 62
           GLKRCGKSCRLRWLNYLRPNIKHGGFTDEEDRIICTLFSTIGSR                
Sbjct: 46  GLKRCGKSCRLRWLNYLRPNIKHGGFTDEEDRIICTLFSTIGSR---------------- 105

Query: 63  WSIIATQLPGRTDNDIKNHWNSKLKRKLIEMEKKAQITTSRTIPSXXXXXXXXXXXXFSS 122
           WSIIATQLPGRTDNDIKNHWNSKLKRKLIEMEKKAQITTSRTIPSXXXXXXXXXXXXFSS
Sbjct: 106 WSIIATQLPGRTDNDIKNHWNSKLKRKLIEMEKKAQITTSRTIPSXXXXXXXXXXXXFSS 165

Query: 123 QPLSSLINKHDDYFNDINYSNYNLSSPPTTIKSFESLISSIPSNWSNNXXNISPSPCLVQ 182
           QPLSSLINKHDDYFNDINYSNYNLSSPPTTIKSFESLISSIPSNWSNNXXNISPSPCLVQ
Sbjct: 166 QPLSSLINKHDDYFNDINYSNYNLSSPPTTIKSFESLISSIPSNWSNNXXNISPSPCLVQ 225

Query: 183 TQETTNLLSSNSLMYNHHNPLVQMKESCLLGFGSEGSCSSSTSDGRSYTQINTTSGIMGF 242
           TQETTNLLSSNSLMYNHHNPLVQMKESCLLGFGSEGSCSSSTSDGRSYTQINTTSGIMGF
Sbjct: 226 TQETTNLLSSNSLMYNHHNPLVQMKESCLLGFGSEGSCSSSTSDGRSYTQINTTSGIMGF 285

Query: 243 QXXXXXXXXXXXXXXXXNIMNYINHQPAANLEYSYMEDENKTLLENFMY 292
           QXXXXXXXXXXXXXXXXNIMNYINHQPAANLEYSYMEDENKTLLENFMY
Sbjct: 286 QXXXXXXXXXXXXXXXXNIMNYINHQPAANLEYSYMEDENKTLLENFMY 318

[Close]

BLAST of CsGy1G013470 vs. NCBI nr
Match: XP_023520293.1 (transcription factor MYB87-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 210.7 bits (535), Expect = 6.7e-51
Identity = 136/241 (56.43%), Postives = 150/241 (62.24%), Query Frame = 0


Query: 3   GLKRCGKSCRLRWLNYLRPNIKHGGFTDEEDRIICTLFSTIGSRWLIYLTSERSSKLFLG 62
           GL RCGKSCRLRWLNYLRPNIKHGGFTDEEDRIICTLFSTIGSR                
Sbjct: 46  GLNRCGKSCRLRWLNYLRPNIKHGGFTDEEDRIICTLFSTIGSR---------------- 105

Query: 63  WSIIATQLPGRTDNDIKNHWNSKLKRKLIEMEKKAQITTSRTIPSXXXXXXXXXXXXFSS 122
           WSIIA+QLPGRTDNDIKNHWNSKLKRKLI MEKKAQ+    T+PS             SS
Sbjct: 106 WSIIASQLPGRTDNDIKNHWNSKLKRKLIAMEKKAQM---GTMPS------FHNHHQISS 165

Query: 123 QPLSSLINKHDDYFNDINYSNYNLSSPPTTIKSFESLISSIPSNWSNNXXNISPSPCLVQ 182
            P   L       + D N+S            SFE+LISSIPSNWSN           +Q
Sbjct: 166 FPSQQL-------YQDSNFS------------SFETLISSIPSNWSN-----------IQ 222

Query: 183 TQET-TNLLSSNSLMYNHHNPLVQMKESCLLGFGSEGSCSSSTSDGRSYTQINTTSGIMG 242
           T+ET +N L +  LMYN++NP+V+      LGFGSEG    ST DG SY QI T SGIMG
Sbjct: 226 TKETNSNSLMNXXLMYNNNNPMVKQSS---LGFGSEG----STCDG-SYNQI-TPSGIMG 222

[Close]

BLAST of CsGy1G013470 vs. NCBI nr
Match: XP_022964958.1 (transcription factor MYB87-like [Cucurbita moschata])

HSP 1 Score: 210.3 bits (534), Expect = 8.8e-51
Identity = 138/241 (57.26%), Postives = 151/241 (62.66%), Query Frame = 0


Query: 3   GLKRCGKSCRLRWLNYLRPNIKHGGFTDEEDRIICTLFSTIGSRWLIYLTSERSSKLFLG 62
           GL RCGKSCRLRWLNYLRPNIKHGGFTDEEDRIICTLFSTIGSR                
Sbjct: 46  GLNRCGKSCRLRWLNYLRPNIKHGGFTDEEDRIICTLFSTIGSR---------------- 105

Query: 63  WSIIATQLPGRTDNDIKNHWNSKLKRKLIEMEKKAQITTSRTIPSXXXXXXXXXXXXFSS 122
           WSIIA+QLPGRTDNDIKNHWNSKLKRKLI MEKKAQ+    T+PS             SS
Sbjct: 106 WSIIASQLPGRTDNDIKNHWNSKLKRKLIAMEKKAQM---GTMPS------FHNHHQISS 165

Query: 123 QPLSSLINKHDDYFNDINYSNYNLSSPPTTIKSFESLISSIPSNWSNNXXNISPSPCLVQ 182
            P   L       + D N+S            SFE+LISSIPSNWSN           +Q
Sbjct: 166 FPSQQL-------YQDSNFS------------SFETLISSIPSNWSN-----------IQ 221

Query: 183 TQET-TNLLSSNSLMYNHHNPLVQMKESCLLGFGSEGSCSSSTSDGRSYTQINTTSGIMG 242
           T+ET +N L +NSLMYN +NP+V+      LGFGSEG    ST DG SY QI T SGIMG
Sbjct: 226 TKETNSNSLMNNSLMYN-NNPMVKQSS---LGFGSEG----STCDG-SYNQI-TPSGIMG 221

[Close]

BLAST of CsGy1G013470 vs. NCBI nr
Match: XP_022970266.1 (transcription factor MYB87-like [Cucurbita maxima])

HSP 1 Score: 206.8 bits (525), Expect = 9.7e-50
Identity = 136/241 (56.43%), Postives = 150/241 (62.24%), Query Frame = 0


Query: 3   GLKRCGKSCRLRWLNYLRPNIKHGGFTDEEDRIICTLFSTIGSRWLIYLTSERSSKLFLG 62
           GL RCGKSCRLRWLNYLRPNIKHGGFTDEEDRIICTLF TIGSR                
Sbjct: 46  GLNRCGKSCRLRWLNYLRPNIKHGGFTDEEDRIICTLFCTIGSR---------------- 105

Query: 63  WSIIATQLPGRTDNDIKNHWNSKLKRKLIEMEKKAQITTSRTIPSXXXXXXXXXXXXFSS 122
           WSIIA+QLPGRTDNDIKNHWNSKLKRKLI MEKKAQ+    T+PS             SS
Sbjct: 106 WSIIASQLPGRTDNDIKNHWNSKLKRKLIAMEKKAQM---GTMPS------FHNHHQISS 165

Query: 123 QPLSSLINKHDDYFNDINYSNYNLSSPPTTIKSFESLISSIPSNWSNNXXNISPSPCLVQ 182
            P   L       + D N+S            SFE+LISSIPSNWSN           +Q
Sbjct: 166 FPSQQL-------YQDSNFS------------SFETLISSIPSNWSN-----------IQ 221

Query: 183 TQET-TNLLSSNSLMYNHHNPLVQMKESCLLGFGSEGSCSSSTSDGRSYTQINTTSGIMG 242
           T+ET +N L +NSL YN +NP+V+      LGFGSEG    ST DG SY QI T+SGIMG
Sbjct: 226 TKETSSNSLMNNSLTYN-NNPMVKQSS---LGFGSEG----STCDG-SYNQI-TSSGIMG 221

[Close]

BLAST of CsGy1G013470 vs. NCBI nr
Match: XP_022998892.1 (transcription factor MYB36-like [Cucurbita maxima])

HSP 1 Score: 190.3 bits (482), Expect = 9.4e-45
Identity = 124/243 (51.03%), Postives = 139/243 (57.20%), Query Frame = 0


Query: 3   GLKRCGKSCRLRWLNYLRPNIKHGGFTDEEDRIICTLFSTIGSRWLIYLTSERSSKLFLG 62
           GLKRCGKSCRLRWLNYLRPNIKHGGFT+EEDRIICTLFSTIGSR                
Sbjct: 46  GLKRCGKSCRLRWLNYLRPNIKHGGFTEEEDRIICTLFSTIGSR---------------- 105

Query: 63  WSIIATQLPGRTDNDIKNHWNSKLKRKLIEMEKKAQITTSRTIPSXXXXXXXXXXXXFSS 122
           WSIIATQLPGRTDNDIKNHWNSKLK+KLI MEK  QI     IP              ++
Sbjct: 106 WSIIATQLPGRTDNDIKNHWNSKLKKKLIGMEKHPQI-----IP--------------TT 165

Query: 123 QPLSSLINKHDDYFNDINYSNYNLSSPPTTIKSFESLISSIPSNWSNNXXNISPSPCLVQ 182
            P SS            +++++ +SS P         +SSIPSNWSN+  NI  SPCLV 
Sbjct: 166 MPYSS------------HHNDHQVSSFPA------QPLSSIPSNWSNDNDNI--SPCLVP 211

Query: 183 TQETTNLLSSNSLMYNHHNPLVQMKESCLLGFGSEGSCSSSTSDGRSYTQINTTSGI--M 242
           TQE+      +SLMY H                      + T DGRS TQIN TS I  M
Sbjct: 226 TQESNMNSLLSSLMYQH----------------------NQTLDGRSCTQINNTSRIMMM 211

Query: 243 GFQ 244
           GFQ
Sbjct: 286 GFQ 211

[Close]

BLAST of CsGy1G013470 vs. TAIR10
Match: AT4G37780.1 (myb domain protein 87)

HSP 1 Score: 136.7 bits (343), Expect = 2.2e-32
Identity = 63/95 (66.32%), Postives = 74/95 (77.89%), Query Frame = 0


Query: 3   GLKRCGKSCRLRWLNYLRPNIKHGGFTDEEDRIICTLFSTIGSRWLIYLTSERSSKLFLG 62
           G+KRCGKSCRLRWLNYLRPN+KHGGFTDEED IIC+L+ TIGSR                
Sbjct: 46  GIKRCGKSCRLRWLNYLRPNLKHGGFTDEEDYIICSLYITIGSR---------------- 105

Query: 63  WSIIATQLPGRTDNDIKNHWNSKLKRKLIEMEKKA 98
           WSIIA+QLPGRTDNDIKN+WN++LK+KL+  + KA
Sbjct: 106 WSIIASQLPGRTDNDIKNYWNTRLKKKLLSKQGKA 124

[Close]

BLAST of CsGy1G013470 vs. TAIR10
Match: AT5G65790.1 (myb domain protein 68)

HSP 1 Score: 134.0 bits (336), Expect = 1.4e-31
Identity = 61/94 (64.89%), Postives = 72/94 (76.60%), Query Frame = 0


Query: 3   GLKRCGKSCRLRWLNYLRPNIKHGGFTDEEDRIICTLFSTIGSRWLIYLTSERSSKLFLG 62
           GL+RCGKSCRLRWLNYLRPNIKHGGF++EED IIC L+ TIGSR                
Sbjct: 46  GLRRCGKSCRLRWLNYLRPNIKHGGFSEEEDNIICNLYVTIGSR---------------- 105

Query: 63  WSIIATQLPGRTDNDIKNHWNSKLKRKLIEMEKK 97
           WSIIA QLPGRTDNDIKN+WN++LK+KL+  ++K
Sbjct: 106 WSIIAAQLPGRTDNDIKNYWNTRLKKKLLNKQRK 123

[Close]

BLAST of CsGy1G013470 vs. TAIR10
Match: AT3G49690.1 (myb domain protein 84)

HSP 1 Score: 133.3 bits (334), Expect = 2.5e-31
Identity = 61/93 (65.59%), Postives = 72/93 (77.42%), Query Frame = 0


Query: 3   GLKRCGKSCRLRWLNYLRPNIKHGGFTDEEDRIICTLFSTIGSRWLIYLTSERSSKLFLG 62
           GLKRCGKSCRLRWLNYLRPNIKHGGF++EE+ IIC+L+ TIGSR                
Sbjct: 46  GLKRCGKSCRLRWLNYLRPNIKHGGFSEEEENIICSLYLTIGSR---------------- 105

Query: 63  WSIIATQLPGRTDNDIKNHWNSKLKRKLIEMEK 96
           WSIIA QLPGRTDNDIKN+WN++LK+KLI  ++
Sbjct: 106 WSIIAAQLPGRTDNDIKNYWNTRLKKKLINKQR 122

[Close]

BLAST of CsGy1G013470 vs. TAIR10
Match: AT5G57620.1 (myb domain protein 36)

HSP 1 Score: 132.1 bits (331), Expect = 5.5e-31
Identity = 62/94 (65.96%), Postives = 73/94 (77.66%), Query Frame = 0


Query: 3   GLKRCGKSCRLRWLNYLRPNIKHGGFTDEEDRIICTLFSTIGSRWLIYLTSERSSKLFLG 62
           GLKRCGKSCRLRWLNYLRPNIKHGGF++EEDRII +L+ +IGSR                
Sbjct: 46  GLKRCGKSCRLRWLNYLRPNIKHGGFSEEEDRIILSLYISIGSR---------------- 105

Query: 63  WSIIATQLPGRTDNDIKNHWNSKLKRKLIEMEKK 97
           WSIIA QLPGRTDNDIKN+WN+KLK+KL+  +K+
Sbjct: 106 WSIIAAQLPGRTDNDIKNYWNTKLKKKLLGRQKQ 123

[Close]

BLAST of CsGy1G013470 vs. TAIR10
Match: AT5G23000.1 (myb domain protein 37)

HSP 1 Score: 122.9 bits (307), Expect = 3.3e-28
Identity = 57/87 (65.52%), Postives = 66/87 (75.86%), Query Frame = 0


Query: 3   GLKRCGKSCRLRWLNYLRPNIKHGGFTDEEDRIICTLFSTIGSRWLIYLTSERSSKLFLG 62
           GL+RCGKSCRLRWLNYLRPNIKHG F++EEDRII +LF+ IGSR                
Sbjct: 46  GLRRCGKSCRLRWLNYLRPNIKHGDFSEEEDRIIFSLFAAIGSR---------------- 105

Query: 63  WSIIATQLPGRTDNDIKNHWNSKLKRK 90
           WSIIA  LPGRTDNDIKN+WN+KL++K
Sbjct: 106 WSIIAAHLPGRTDNDIKNYWNTKLRKK 116

[Close]

BLAST of CsGy1G013470 vs. Swiss-Prot
Match: sp|F4JSU0|MYB87_ARATH (Transcription factor MYB87 OS=Arabidopsis thaliana OX=3702 GN=MYB87 PE=2 SV=1)

HSP 1 Score: 136.7 bits (343), Expect = 4.0e-31
Identity = 63/95 (66.32%), Postives = 74/95 (77.89%), Query Frame = 0


Query: 3   GLKRCGKSCRLRWLNYLRPNIKHGGFTDEEDRIICTLFSTIGSRWLIYLTSERSSKLFLG 62
           G+KRCGKSCRLRWLNYLRPN+KHGGFTDEED IIC+L+ TIGSR                
Sbjct: 46  GIKRCGKSCRLRWLNYLRPNLKHGGFTDEEDYIICSLYITIGSR---------------- 105

Query: 63  WSIIATQLPGRTDNDIKNHWNSKLKRKLIEMEKKA 98
           WSIIA+QLPGRTDNDIKN+WN++LK+KL+  + KA
Sbjct: 106 WSIIASQLPGRTDNDIKNYWNTRLKKKLLSKQGKA 124

[Close]

BLAST of CsGy1G013470 vs. Swiss-Prot
Match: sp|Q9M2Y9|RAX3_ARATH (Transcription factor RAX3 OS=Arabidopsis thaliana OX=3702 GN=RAX3 PE=2 SV=1)

HSP 1 Score: 133.3 bits (334), Expect = 4.5e-30
Identity = 61/93 (65.59%), Postives = 72/93 (77.42%), Query Frame = 0


Query: 3   GLKRCGKSCRLRWLNYLRPNIKHGGFTDEEDRIICTLFSTIGSRWLIYLTSERSSKLFLG 62
           GLKRCGKSCRLRWLNYLRPNIKHGGF++EE+ IIC+L+ TIGSR                
Sbjct: 46  GLKRCGKSCRLRWLNYLRPNIKHGGFSEEEENIICSLYLTIGSR---------------- 105

Query: 63  WSIIATQLPGRTDNDIKNHWNSKLKRKLIEMEK 96
           WSIIA QLPGRTDNDIKN+WN++LK+KLI  ++
Sbjct: 106 WSIIAAQLPGRTDNDIKNYWNTRLKKKLINKQR 122

[Close]

BLAST of CsGy1G013470 vs. Swiss-Prot
Match: sp|Q9FKL2|MYB36_ARATH (Transcription factor MYB36 OS=Arabidopsis thaliana OX=3702 GN=MYB36 PE=1 SV=1)

HSP 1 Score: 132.1 bits (331), Expect = 9.9e-30
Identity = 62/94 (65.96%), Postives = 73/94 (77.66%), Query Frame = 0


Query: 3   GLKRCGKSCRLRWLNYLRPNIKHGGFTDEEDRIICTLFSTIGSRWLIYLTSERSSKLFLG 62
           GLKRCGKSCRLRWLNYLRPNIKHGGF++EEDRII +L+ +IGSR                
Sbjct: 46  GLKRCGKSCRLRWLNYLRPNIKHGGFSEEEDRIILSLYISIGSR---------------- 105

Query: 63  WSIIATQLPGRTDNDIKNHWNSKLKRKLIEMEKK 97
           WSIIA QLPGRTDNDIKN+WN+KLK+KL+  +K+
Sbjct: 106 WSIIAAQLPGRTDNDIKNYWNTKLKKKLLGRQKQ 123

[Close]

BLAST of CsGy1G013470 vs. Swiss-Prot
Match: sp|Q9FG68|RAX1_ARATH (Transcription factor RAX1 OS=Arabidopsis thaliana OX=3702 GN=RAX1 PE=1 SV=1)

HSP 1 Score: 122.9 bits (307), Expect = 6.0e-27
Identity = 57/87 (65.52%), Postives = 66/87 (75.86%), Query Frame = 0


Query: 3   GLKRCGKSCRLRWLNYLRPNIKHGGFTDEEDRIICTLFSTIGSRWLIYLTSERSSKLFLG 62
           GL+RCGKSCRLRWLNYLRPNIKHG F++EEDRII +LF+ IGSR                
Sbjct: 46  GLRRCGKSCRLRWLNYLRPNIKHGDFSEEEDRIIFSLFAAIGSR---------------- 105

Query: 63  WSIIATQLPGRTDNDIKNHWNSKLKRK 90
           WSIIA  LPGRTDNDIKN+WN+KL++K
Sbjct: 106 WSIIAAHLPGRTDNDIKNYWNTKLRKK 116

[Close]

BLAST of CsGy1G013470 vs. Swiss-Prot
Match: sp|Q9SJL7|RAX2_ARATH (Transcription factor RAX2 OS=Arabidopsis thaliana OX=3702 GN=RAX2 PE=1 SV=1)

HSP 1 Score: 117.1 bits (292), Expect = 3.3e-25
Identity = 54/85 (63.53%), Postives = 63/85 (74.12%), Query Frame = 0


Query: 3   GLKRCGKSCRLRWLNYLRPNIKHGGFTDEEDRIICTLFSTIGSRWLIYLTSERSSKLFLG 62
           GL+RCGKSCRLRWLNYLRPNI+HG FT+EED II +LF++IGSR                
Sbjct: 46  GLRRCGKSCRLRWLNYLRPNIRHGDFTEEEDNIIYSLFASIGSR---------------- 105

Query: 63  WSIIATQLPGRTDNDIKNHWNSKLK 88
           WS+IA  L GRTDNDIKN+WN+KLK
Sbjct: 106 WSVIAAHLQGRTDNDIKNYWNTKLK 114

[Close]

BLAST of CsGy1G013470 vs. TrEMBL
Match: tr|A0A0A0LUZ6|A0A0A0LUZ6_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G109320 PE=4 SV=1)

HSP 1 Score: 475.3 bits (1222), Expect = 9.7e-131
Identity = 273/289 (94.46%), Postives = 273/289 (94.46%), Query Frame = 0


Query: 3   GLKRCGKSCRLRWLNYLRPNIKHGGFTDEEDRIICTLFSTIGSRWLIYLTSERSSKLFLG 62
           GLKRCGKSCRLRWLNYLRPNIKHGGFTDEEDRIICTLFSTIGSR                
Sbjct: 46  GLKRCGKSCRLRWLNYLRPNIKHGGFTDEEDRIICTLFSTIGSR---------------- 105

Query: 63  WSIIATQLPGRTDNDIKNHWNSKLKRKLIEMEKKAQITTSRTIPSXXXXXXXXXXXXFSS 122
           WSIIATQLPGRTDNDIKNHWNSKLKRKLIEMEKKAQITTSRTIPSXXXXXXXXXXXXFSS
Sbjct: 106 WSIIATQLPGRTDNDIKNHWNSKLKRKLIEMEKKAQITTSRTIPSXXXXXXXXXXXXFSS 165

Query: 123 QPLSSLINKHDDYFNDINYSNYNLSSPPTTIKSFESLISSIPSNWSNNXXNISPSPCLVQ 182
           QPLSSLINKHDDYFNDINYSNYNLSSPPTTIKSFESLISSIPSNWSNNXXNISPSPCLVQ
Sbjct: 166 QPLSSLINKHDDYFNDINYSNYNLSSPPTTIKSFESLISSIPSNWSNNXXNISPSPCLVQ 225

Query: 183 TQETTNLLSSNSLMYNHHNPLVQMKESCLLGFGSEGSCSSSTSDGRSYTQINTTSGIMGF 242
           TQETTNLLSSNSLMYNHHNPLVQMKESCLLGFGSEGSCSSSTSDGRSYTQINTTSGIMGF
Sbjct: 226 TQETTNLLSSNSLMYNHHNPLVQMKESCLLGFGSEGSCSSSTSDGRSYTQINTTSGIMGF 285

Query: 243 QXXXXXXXXXXXXXXXXNIMNYINHQPAANLEYSYMEDENKTLLENFMY 292
           QXXXXXXXXXXXXXXXXNIMNYINHQPAANLEYSYMEDENKTLLENFMY
Sbjct: 286 QXXXXXXXXXXXXXXXXNIMNYINHQPAANLEYSYMEDENKTLLENFMY 318

[Close]

BLAST of CsGy1G013470 vs. TrEMBL
Match: tr|A0A2P6QGY2|A0A2P6QGY2_ROSCH (Putative transcription factor MYB-HB-like family OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr5g0057501 PE=4 SV=1)

HSP 1 Score: 161.0 bits (406), Expect = 4.0e-36
Identity = 115/245 (46.94%), Postives = 139/245 (56.73%), Query Frame = 0


Query: 3   GLKRCGKSCRLRWLNYLRPNIKHGGFTDEEDRIICTLFSTIGSRWLIYLTSERSSKLFLG 62
           GLKRCGKSCRLRWLNYLRPNIKHG F++EEDRIICTLF++IGSR                
Sbjct: 46  GLKRCGKSCRLRWLNYLRPNIKHGEFSEEEDRIICTLFTSIGSR---------------- 105

Query: 63  WSIIATQLPGRTDNDIKNHWNSKLKRKLIEME---KKAQITTSRTIPS------XXXXXX 122
           WSIIA QLPGRTDNDIKN+WN+KLK+KL +M+       +TTS++  S            
Sbjct: 106 WSIIAAQLPGRTDNDIKNYWNTKLKKKLRDMQTHMAPPSLTTSQSHRSNPPPFPVSSSLH 165

Query: 123 XXXXXXFSSQPLSSLINKHDDYFNDINYSNYNLS-SPPTTIKSFESLISSIPSNWSNNXX 182
                 F  QPLS +   H D  N + YS Y  + + P T  SF S    +P N SN   
Sbjct: 166 QFQNQPFHHQPLSLM---HKD-LNMMTYSTYTPTLTSPATPGSFSSGFEIMP-NISNPLT 225

Query: 183 NISPSPCLVQTQETTNLLSSNSLMYNHHNPLVQMKESCLLGFGSEGSCSSSTSDGRSYTQ 238
           N S    L QTQE        S+ YNH  P V+ K   L+ FGSEGSCS+S+    +  Q
Sbjct: 226 NYS---SLFQTQECL----VGSMHYNH--PAVK-KNLNLIMFGSEGSCSTSSDGSCNNNQ 259

[Close]

BLAST of CsGy1G013470 vs. TrEMBL
Match: tr|A0A2P4M0T2|A0A2P4M0T2_QUESU (Transcription factor myb36 OS=Quercus suber OX=58331 GN=CFP56_33206 PE=4 SV=1)

HSP 1 Score: 159.1 bits (401), Expect = 1.5e-35
Identity = 119/248 (47.98%), Postives = 143/248 (57.66%), Query Frame = 0


Query: 3   GLKRCGKSCRLRWLNYLRPNIKHGGFTDEEDRIICTLFSTIGSRWLIYLTSERSSKLFLG 62
           GLKRCGKSCRLRWLNYLRPNIKHG F+DEEDRIICTLF++IGSR                
Sbjct: 46  GLKRCGKSCRLRWLNYLRPNIKHGEFSDEEDRIICTLFASIGSR---------------- 105

Query: 63  WSIIATQLPGRTDNDIKNHWNSKLKRKLIEMEKKAQITTSRTIPSXXXXXXXXXXXXFSS 122
           WSIIA QLPGRTDNDIKN+WN+KLK+KL+ M   +Q       PS            F S
Sbjct: 106 WSIIAAQLPGRTDNDIKNYWNTKLKKKLMGMLPPSQ-RKPPPFPS------PHQGPPFQS 165

Query: 123 QPLSSLINKHDDYFNDINYSNYNLSSPPTTIKSFESLIS-SIPSNWSNNXXNISPS--PC 182
           QPLS         + + + S Y+    PTT KSF  L S S+P N+SN   +++ +    
Sbjct: 166 QPLS---------YKECSLSYYS----PTTTKSFSGLESMSVPLNFSNTTTSLATNNPSS 225

Query: 183 LVQTQETTNLLSSNSLMYNHHNPLVQMKESCLLGFGSEGSCSSSTSDGRSYTQINTTSGI 242
           L QTQE+       S+ Y        +KE+ LL FGSEGS  SS SDG S TQI+    +
Sbjct: 226 LFQTQESW----LGSMQY------YPVKEN-LLMFGSEGSTCSS-SDG-SCTQISYGRVV 244

Query: 243 ----MGFQ 244
               MGFQ
Sbjct: 286 KQEEMGFQ 244

[Close]

BLAST of CsGy1G013470 vs. TrEMBL
Match: tr|A0A2I4HB03|A0A2I4HB03_9ROSI (transcription factor RAX2-like OS=Juglans regia OX=51240 GN=LOC109015309 PE=4 SV=1)

HSP 1 Score: 157.9 bits (398), Expect = 3.4e-35
Identity = 109/239 (45.61%), Postives = 133/239 (55.65%), Query Frame = 0


Query: 3   GLKRCGKSCRLRWLNYLRPNIKHGGFTDEEDRIICTLFSTIGSRWLIYLTSERSSKLFLG 62
           GLKRCGKSCRLRWLNYLRPNIKHG F+DEEDR ICTLF+ IGSR                
Sbjct: 46  GLKRCGKSCRLRWLNYLRPNIKHGEFSDEEDRTICTLFANIGSR---------------- 105

Query: 63  WSIIATQLPGRTDNDIKNHWNSKLKRKLIEM-----EKKAQITTSRTIPSXXXXXXXXXX 122
           WSIIA QLPGRTDNDIKN+WN+KLK+KL+ M      K A   +S  IP           
Sbjct: 106 WSIIAAQLPGRTDNDIKNYWNTKLKKKLMGMHLPPQRKLAPFASSSQIP----------- 165

Query: 123 XXFSSQPL-SSLINKHDDYFNDINYSNYNLSSPPTTIKSFESLIS-SIPSNWSNNXXNIS 182
             F SQPL SSL  +   Y+                 KSF  L + S PSN+ ++  +++
Sbjct: 166 -PFQSQPLSSSLYEECSSYY-----------------KSFSGLEAISFPSNYLSSSTSLA 225

Query: 183 PSPCLVQTQETTNLLSSNSLMYNHHNPLVQMKESCLLGFGSEGSCSSSTSDGRSYTQIN 235
            +P + QT E  + +SS         P   + E+ L+ FGSEGSC S  SD  S TQI+
Sbjct: 226 TNPSIFQTHE--SCVSS--------MPYYPVNENVLM-FGSEGSCRS--SDDGSCTQIS 226

[Close]

BLAST of CsGy1G013470 vs. TrEMBL
Match: tr|A0A2I4HRK9|A0A2I4HRK9_9ROSI (transcription factor RAX2-like OS=Juglans regia OX=51240 GN=LOC109020704 PE=4 SV=1)

HSP 1 Score: 157.9 bits (398), Expect = 3.4e-35
Identity = 116/250 (46.40%), Postives = 142/250 (56.80%), Query Frame = 0


Query: 3   GLKRCGKSCRLRWLNYLRPNIKHGGFTDEEDRIICTLFSTIGSRWLIYLTSERSSKLFLG 62
           GLKRCGKSCRLRWLNYLRPNIKHG F+DEEDRIIC LF++IGSR                
Sbjct: 46  GLKRCGKSCRLRWLNYLRPNIKHGEFSDEEDRIICALFASIGSR---------------- 105

Query: 63  WSIIATQLPGRTDNDIKNHWNSKLKRKL---IEMEKKAQITTSRTIPSXXXXXXXXXXXX 122
           WSIIA QLPGRTDNDIKN+WN+KLK+KL   +  + +    +S   P             
Sbjct: 106 WSIIAAQLPGRTDNDIKNYWNTKLKKKLFMGMHPQSERPFQSSHQTP------------P 165

Query: 123 FSSQPLSSLINKHDDYFNDINYSNYNLSSPPTTIKSFESL--ISSIPSNWSNNXXNISPS 182
           F +QPLSS + K          S+Y  S    T KSF  L   +SIP ++ ++  +++  
Sbjct: 166 FQTQPLSSSLYK--------ECSSYYTS----TTKSFSGLDPSTSIPPSFLSSSTSLATH 225

Query: 183 PCLVQTQETTNLLSSNSLMYNHHNPLVQMKESCLLGFGSEGSCSSSTSDGRSYTQINTTS 242
           P + QTQE     S  S M  +      +KE+ LL FGSEGSCSS  SDG S TQI+   
Sbjct: 226 PSVFQTQE-----SRASFMQYY-----PVKEN-LLMFGSEGSCSS--SDG-SCTQISYGR 241

Query: 243 GI----MGFQ 244
           GI    M FQ
Sbjct: 286 GIKQEVMAFQ 241

The following BLAST results are available for this feature:

BLAST of CsGy1G013470 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN64809.1	1.5e-130	94.46	hypothetical protein Csa_1G109320 [Cucumis sativus]	[more]
XP_023520293.1	6.7e-51	56.43	transcription factor MYB87-like [Cucurbita pepo subsp. pepo]	[more]
XP_022964958.1	8.8e-51	57.26	transcription factor MYB87-like [Cucurbita moschata]	[more]
XP_022970266.1	9.7e-50	56.43	transcription factor MYB87-like [Cucurbita maxima]	[more]
XP_022998892.1	9.4e-45	51.03	transcription factor MYB36-like [Cucurbita maxima]	[more]

BLAST of CsGy1G013470 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G37780.1	2.2e-32	66.32	myb domain protein 87	[more]
AT5G65790.1	1.4e-31	64.89	myb domain protein 68	[more]
AT3G49690.1	2.5e-31	65.59	myb domain protein 84	[more]
AT5G57620.1	5.5e-31	65.96	myb domain protein 36	[more]
AT5G23000.1	3.3e-28	65.52	myb domain protein 37	[more]

BLAST of CsGy1G013470 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|F4JSU0\|MYB87_ARATH	4.0e-31	66.32	Transcription factor MYB87 OS=Arabidopsis thaliana OX=3702 GN=MYB87 PE=2 SV=1	[more]
sp\|Q9M2Y9\|RAX3_ARATH	4.5e-30	65.59	Transcription factor RAX3 OS=Arabidopsis thaliana OX=3702 GN=RAX3 PE=2 SV=1	[more]
sp\|Q9FKL2\|MYB36_ARATH	9.9e-30	65.96	Transcription factor MYB36 OS=Arabidopsis thaliana OX=3702 GN=MYB36 PE=1 SV=1	[more]
sp\|Q9FG68\|RAX1_ARATH	6.0e-27	65.52	Transcription factor RAX1 OS=Arabidopsis thaliana OX=3702 GN=RAX1 PE=1 SV=1	[more]
sp\|Q9SJL7\|RAX2_ARATH	3.3e-25	63.53	Transcription factor RAX2 OS=Arabidopsis thaliana OX=3702 GN=RAX2 PE=1 SV=1	[more]

BLAST of CsGy1G013470 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0LUZ6\|A0A0A0LUZ6_CUCSA	9.7e-131	94.46	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G109320 PE=4 SV=1	[more]
tr\|A0A2P6QGY2\|A0A2P6QGY2_ROSCH	4.0e-36	46.94	Putative transcription factor MYB-HB-like family OS=Rosa chinensis OX=74649 GN=R...	[more]
tr\|A0A2P4M0T2\|A0A2P4M0T2_QUESU	1.5e-35	47.98	Transcription factor myb36 OS=Quercus suber OX=58331 GN=CFP56_33206 PE=4 SV=1	[more]
tr\|A0A2I4HB03\|A0A2I4HB03_9ROSI	3.4e-35	45.61	transcription factor RAX2-like OS=Juglans regia OX=51240 GN=LOC109015309 PE=4 SV...	[more]
tr\|A0A2I4HRK9\|A0A2I4HRK9_9ROSI	3.4e-35	46.40	transcription factor RAX2-like OS=Juglans regia OX=51240 GN=LOC109020704 PE=4 SV...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0003677	DNA binding

Vocabulary: **INTERPRO**
Term	Definition
IPR009057	Homeobox-like_sf
IPR017930	Myb_dom
IPR017877	Myb-like_dom
IPR001005	SANT/Myb

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003677	DNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy1G013470.1	CsGy1G013470.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 83..103
None	No IPR available	GENE3D	G3DSA:1.10.10.60		coord: 27..116 e-value: 2.0E-16 score: 61.8
None	No IPR available	GENE3D	G3DSA:1.10.10.60		coord: 1..25 e-value: 1.8E-6 score: 29.6
None	No IPR available	PANTHER	PTHR10641:SF506	SUBFAMILY NOT NAMED	coord: 63..261
None	No IPR available	PANTHER	PTHR10641	MYB-LIKE DNA-BINDING PROTEIN MYB	coord: 63..261
None	No IPR available	PANTHER	PTHR10641:SF506	SUBFAMILY NOT NAMED	coord: 3..49
None	No IPR available	PANTHER	PTHR10641	MYB-LIKE DNA-BINDING PROTEIN MYB	coord: 3..49
IPR001005	SANT/Myb domain	SMART	SM00717	sant	coord: 24..88 e-value: 1.9E-5 score: 34.1
IPR001005	SANT/Myb domain	PFAM	PF00249	Myb_DNA-binding	coord: 26..84 e-value: 1.5E-8 score: 34.5
IPR001005	SANT/Myb domain	CDD	cd00167	SANT	coord: 28..86 e-value: 1.0142E-4 score: 37.9402
IPR017877	Myb-like domain	PROSITE	PS50090	MYB_LIKE	coord: 1..19 score: 4.426
IPR017930	Myb domain	PROSITE	PS51294	HTH_MYB	coord: 20..90 score: 15.071
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	SSF46689	Homeodomain-like	coord: 5..90

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsGy1G013470	Cla005093	Watermelon (97103) v1	cgybwmB012
CsGy1G013470	Csa1G109320	Cucumber (Chinese Long) v2	cgybcuB001
CsGy1G013470	MELO3C004947	Melon (DHL92) v3.5.1	cgybmeB010
CsGy1G013470	ClCG03G002780	Watermelon (Charleston Gray)	cgybwcgB035
CsGy1G013470	CSPI01G13370	Wild cucumber (PI 183967)	cgybcpiB001
CsGy1G013470	CmaCh13G002390	Cucurbita maxima (Rimu)	cgybcmaB061
CsGy1G013470	CmaCh01G005130	Cucurbita maxima (Rimu)	cgybcmaB110
CsGy1G013470	CmoCh01G005450	Cucurbita moschata (Rifu)	cgybcmoB104
CsGy1G013470	CmoCh13G002400	Cucurbita moschata (Rifu)	cgybcmoB057
CsGy1G013470	Lsi03G000120	Bottle gourd (USVL1VR-Ls)	cgyblsiB041
CsGy1G013470	Cp4.1LG20g07170	Cucurbita pepo (Zucchini)	cgybcpeB082
CsGy1G013470	Cp4.1LG02g12550	Cucurbita pepo (Zucchini)	cgybcpeB090
CsGy1G013470	MELO3C004947.2	Melon (DHL92) v3.6.1	cgybmedB009
CsGy1G013470	CsaV3_1G013560	Cucumber (Chinese Long) v3	cgybcucB002
CsGy1G013470	Cla97C03G053830	Watermelon (97103) v2	cgybwmbB034
CsGy1G013470	Carg12289	Silver-seed gourd	carcgybB0449

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CsGy1G013470	CsGy3G031140	Cucumber (Gy14) v2	cgybcgybB017

The following block(s) are covering this gene:


Gene	Organism	Block
CsGy1G013470	Silver-seed gourd	carcgybB0342
CsGy1G013470	Silver-seed gourd	carcgybB1051
CsGy1G013470	Wax gourd	cgybwgoB015
CsGy1G013470	Wax gourd	cgybwgoB046