CsaV3_1G013560 (gene) Cucumber (Chinese Long) v3 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsaV3_1G013560
Type	gene
Organism	Cucumis sativus (Cucumber (Chinese Long) v3)
Description	Myb transcription factor
Location	chr1 : 8845815 .. 8847537 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

AGACAAAAAAAAATGGGAAGATCTCCTTGTTGTGATAAGAGTAATGTGAAGAAGGGTCCTTGGTCTCCTGAAGAAGATGCTAAGCTCAAGGATTTTATTGACAAAAATGGCACTGGTGGAAATTGGATCTCTCTCCCCCAAAAAGCTGGTAATTTTAGGGTGTTAGGGTTTTGAATCTGTTATTTTCCCTTCTTCTTACCATAAAGGTAGGGAGATCACAATGTTAAATAATTGTATTACTCGTACGGTTTTCTTTGTTTAAGTGGGGTTTTTTAAGTCTCTTTTTTAGATCTCTTTTTGTAAAATGAGTGTTTTTTCTTTTTCATTGCATTTGTGGTTGAGGTGTGATGAGGGTGCAGGATGTATAAACTTAGTTGAGATATGTCGGTTAATTTCTCTTTCTATTTTGTTAAAATAATAATAGTAGTCATAATACTAAAATTGTTTTTTCTTTCTTTCATGTTTTGTGGATTATTATGGAAGGTTTGAAGAGATGTGGGAAGAGTTGCAGGTTGAGATGGCTTAACTATTTGAGGCCTAACATTAAACATGGAGGATTCACTGATGAGGAAGATAGAATAATTTGTACTCTTTTTTCCACTATTGGAAGCAGGTACATTTATTTATATAATCTTGATTAATATTTTATTAATCACTTAACCTTCTTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTTTTCTTTTTTGTAGATTTTATTTATTCTTCTTCTTTATGCATTTCTACATTATTATTATCTTCTTATGTTTAGAATAGTGTGTATAAACAATTAAATTTACCCTAACCAAGCTTACTTAAACATTACATAACAATGTATATATAAGCATTTGCTTATATGGATCTAGCTTGAGAATTTACAGGTGGTTGATAATGTATATTTGATTTCTTCAAAAAACAAGTAACTTTAACGAAATTTTTTTAGGATTTTTCCCTTTCATCTTCTTGTGGATCTAGCTTGAGAATTTATAGGTGGTTGATATATCTCACGAGTGAAAGATCGAGTAAGCTTTTCTTAGGGTTTTTTTTTCTCTTTCTTTCTTTTTCTGGATCTAGCTTGAGATCGATCAAATTCGCAGGTGGTCAATAATCGCAACGCAATTACCGGGAAGAACGGACAATGACATAAAGAATCATTGGAATAGCAAGCTAAAGAGGAAGCTTATAGAAATGGAGAAGAAAGCCCAAATAACCACATCCAGAACCATACCATCTTCACATAATCATCATCATCATCAAATTTTCTCATCATTTTCATCTCAACCACTCTCATCCCTAATCAACAAACATGATGACTACTTCAATGATATTAATTATTCCAATTATAACCTTTCCTCCCCTCCAACAACAATCAAAAGCTTTGAATCTCTCATTTCATCAATCCCATCAAATTGGTCAAACAACAATAATAACATTAGCCCTAGCCCCTGTCTTGTCCAAACACAAGAAACAACCAACTTATTGAGTAGTAATTCCTTGATGTATAATCATCATAATCCATTGGTACAAATGAAAGAAAGCTGCTTATTAGGGTTTGGAAGTGAAGGAAGTTGCAGTTCAAGTACTTCTGATGGAAGAAGCTACACTCAAATCAACACCACTTCAGGGATAATGGGATTTCAAAATAATAATAATAATAATAACCCTAATTATTATTATTATTATTCTGATAATATTATGAATTATATTAATCATCA

mRNA sequence

AGACAAAAAAAAATGGGAAGATCTCCTTGTTGTGATAAGAGTAATGTGAAGAAGGGTCCTTGGTCTCCTGAAGAAGATGCTAAGCTCAAGGATTTTATTGACAAAAATGGCACTGGTGGAAATTGGATCTCTCTCCCCCAAAAAGCTGGTTTGAAGAGATGTGGGAAGAGTTGCAGGTTGAGATGGCTTAACTATTTGAGGCCTAACATTAAACATGGAGGATTCACTGATGAGGAAGATAGAATAATTTGTACTCTTTTTTCCACTATTGGAAGCAGGTGGTCAATAATCGCAACGCAATTACCGGGAAGAACGGACAATGACATAAAGAATCATTGGAATAGCAAGCTAAAGAGGAAGCTTATAGAAATGGAGAAGAAAGCCCAAATAACCACATCCAGAACCATACCATCTTCACATAATCATCATCATCATCAAATTTTCTCATCATTTTCATCTCAACCACTCTCATCCCTAATCAACAAACATGATGACTACTTCAATGATATTAATTATTCCAATTATAACCTTTCCTCCCCTCCAACAACAATCAAAAGCTTTGAATCTCTCATTTCATCAATCCCATCAAATTGGTCAAACAACAATAATAACATTAGCCCTAGCCCCTGTCTTGTCCAAACACAAGAAACAACCAACTTATTGAGTAGTAATTCCTTGATGTATAATCATCATAATCCATTGGTACAAATGAAAGAAAGCTGCTTATTAGGGTTTGGAAGTGAAGGAAGTTGCAGTTCAAGTACTTCTGATGGAAGAAGCTACACTCAAATCAACACCACTTCAGGGATAATGGGATTTCAAAATAATAATAATAATAATAACCCTAATTATTATTATTATTATTCTGATAATATTATGAATTATATTAATCATCA

Coding sequence (CDS)

AGACAAAAAAAAATGGGAAGATCTCCTTGTTGTGATAAGAGTAATGTGAAGAAGGGTCCTTGGTCTCCTGAAGAAGATGCTAAGCTCAAGGATTTTATTGACAAAAATGGCACTGGTGGAAATTGGATCTCTCTCCCCCAAAAAGCTGGTTTGAAGAGATGTGGGAAGAGTTGCAGGTTGAGATGGCTTAACTATTTGAGGCCTAACATTAAACATGGAGGATTCACTGATGAGGAAGATAGAATAATTTGTACTCTTTTTTCCACTATTGGAAGCAGGTGGTCAATAATCGCAACGCAATTACCGGGAAGAACGGACAATGACATAAAGAATCATTGGAATAGCAAGCTAAAGAGGAAGCTTATAGAAATGGAGAAGAAAGCCCAAATAACCACATCCAGAACCATACCATCTTCACATAATCATCATCATCATCAAATTTTCTCATCATTTTCATCTCAACCACTCTCATCCCTAATCAACAAACATGATGACTACTTCAATGATATTAATTATTCCAATTATAACCTTTCCTCCCCTCCAACAACAATCAAAAGCTTTGAATCTCTCATTTCATCAATCCCATCAAATTGGTCAAACAACAATAATAACATTAGCCCTAGCCCCTGTCTTGTCCAAACACAAGAAACAACCAACTTATTGAGTAGTAATTCCTTGATGTATAATCATCATAATCCATTGGTACAAATGAAAGAAAGCTGCTTATTAGGGTTTGGAAGTGAAGGAAGTTGCAGTTCAAGTACTTCTGATGGAAGAAGCTACACTCAAATCAACACCACTTCAGGGATAATGGGATTTCAAAATAATAATAATAATAATAACCCTAATTATTATTATTATTATTCTGATAATATTATGAATTATATTAATCATCA

Protein sequence

RQKKMGRSPCCDKSNVKKGPWSPEEDAKLKDFIDKNGTGGNWISLPQKAGLKRCGKSCRLRWLNYLRPNIKHGGFTDEEDRIICTLFSTIGSRWSIIATQLPGRTDNDIKNHWNSKLKRKLIEMEKKAQITTSRTIPSSHNHHHHQIFSSFSSQPLSSLINKHDDYFNDINYSNYNLSSPPTTIKSFESLISSIPSNWSNNNNNISPSPCLVQTQETTNLLSSNSLMYNHHNPLVQMKESCLLGFGSEGSCSSSTSDGRSYTQINTTSGIMGFQNNNNNNNPNYYYYYSDNIMNYINHX

Homology

[Close]

BLAST of CsaV3_1G013560 vs. NCBI nr
Match: KGN64809.1 (hypothetical protein Csa_1G109320 [Cucumis sativus])

HSP 1 Score: 535.4 bits (1378), Expect = 1.2e-148
Identity = 294/294 (100.00%), Postives = 294/294 (100.00%), Query Frame = 0


Query: 5   MGRSPCCDKSNVKKGPWSPEEDAKLKDFIDKNGTGGNWISLPQKAGLKRCGKSCRLRWLN 64
           MGRSPCCDKSNVKKGPWSPEEDAKLKDFIDKNGTGGNWISLPQKAGLKRCGKSCRLRWLN
Sbjct: 1   MGRSPCCDKSNVKKGPWSPEEDAKLKDFIDKNGTGGNWISLPQKAGLKRCGKSCRLRWLN 60

Query: 65  YLRPNIKHGGFTDEEDRIICTLFSTIGSRWSIIATQLPGRTDNDIKNHWNSKLKRKLIEM 124
           YLRPNIKHGGFTDEEDRIICTLFSTIGSRWSIIATQLPGRTDNDIKNHWNSKLKRKLIEM
Sbjct: 61  YLRPNIKHGGFTDEEDRIICTLFSTIGSRWSIIATQLPGRTDNDIKNHWNSKLKRKLIEM 120

Query: 125 EKKAQITTSRTIPSXXXXXXXXXXXXFSSQPLSSLINKHDDYFNDINYSNYNLSSPPTTI 184
           EKKAQITTSRTIPSXXXXXXXXXXXXFSSQPLSSLINKHDDYFNDINYSNYNLSSPPTTI
Sbjct: 121 EKKAQITTSRTIPSXXXXXXXXXXXXFSSQPLSSLINKHDDYFNDINYSNYNLSSPPTTI 180

Query: 185 KSFESLISSIPSNWSNNXXNISPSPCLVQTQETTNLLSSNSLMYNHHNPLVQMKESCLLG 244
           KSFESLISSIPSNWSNNXXNISPSPCLVQTQETTNLLSSNSLMYNHHNPLVQMKESCLLG
Sbjct: 181 KSFESLISSIPSNWSNNXXNISPSPCLVQTQETTNLLSSNSLMYNHHNPLVQMKESCLLG 240

Query: 245 FGSEGSCSSSTSDGRSYTQINTTSGIMGFQXXXXXXXXXXXXXXXXNIMNYINH 299
           FGSEGSCSSSTSDGRSYTQINTTSGIMGFQXXXXXXXXXXXXXXXXNIMNYINH
Sbjct: 241 FGSEGSCSSSTSDGRSYTQINTTSGIMGFQXXXXXXXXXXXXXXXXNIMNYINH 294

[Close]

BLAST of CsaV3_1G013560 vs. NCBI nr
Match: XP_023520293.1 (transcription factor MYB87-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 300.4 bits (768), Expect = 6.6e-78
Identity = 173/270 (64.07%), Postives = 190/270 (70.37%), Query Frame = 0


Query: 5   MGRSPCCDKSNVKKGPWSPEEDAKLKDFIDKNGTGGNWISLPQKAGLKRCGKSCRLRWLN 64
           MGRSPCCDK+ VKKGPWSPEEDAKLK +I  +GT GNWISLPQKAGL RCGKSCRLRWLN
Sbjct: 1   MGRSPCCDKAIVKKGPWSPEEDAKLKAYIINHGTAGNWISLPQKAGLNRCGKSCRLRWLN 60

Query: 65  YLRPNIKHGGFTDEEDRIICTLFSTIGSRWSIIATQLPGRTDNDIKNHWNSKLKRKLIEM 124
           YLRPNIKHGGFTDEEDRIICTLFSTIGSRWSIIA+QLPGRTDNDIKNHWNSKLKRKLI M
Sbjct: 61  YLRPNIKHGGFTDEEDRIICTLFSTIGSRWSIIASQLPGRTDNDIKNHWNSKLKRKLIAM 120

Query: 125 EKKAQITTSRTIPSXXXXXXXXXXXXFSSQPLSSLINKHDDYFNDINYSNYNLSSPPTTI 184
           EKKAQ+    T+PS             SS P   L       + D N+S           
Sbjct: 121 EKKAQM---GTMPS------FHNHHQISSFPSQQL-------YQDSNFS----------- 180

Query: 185 KSFESLISSIPSNWSNNXXNISPSPCLVQTQET-TNLLSSNSLMYNHHNPLVQMKESCLL 244
            SFE+LISSIPSNWSN           +QT+ET +N L +  LMYN++NP+V+      L
Sbjct: 181 -SFETLISSIPSNWSN-----------IQTKETNSNSLMNXXLMYNNNNPMVKQSS---L 222

Query: 245 GFGSEGSCSSSTSDGRSYTQINTTSGIMGF 274
           GFGSEG    ST DG SY QI T SGIMGF
Sbjct: 241 GFGSEG----STCDG-SYNQI-TPSGIMGF 222

[Close]

BLAST of CsaV3_1G013560 vs. NCBI nr
Match: XP_022964958.1 (transcription factor MYB87-like [Cucurbita moschata])

HSP 1 Score: 300.1 bits (767), Expect = 8.6e-78
Identity = 175/270 (64.81%), Postives = 191/270 (70.74%), Query Frame = 0


Query: 5   MGRSPCCDKSNVKKGPWSPEEDAKLKDFIDKNGTGGNWISLPQKAGLKRCGKSCRLRWLN 64
           MGRSPCCDK+ VKKGPWSPEEDAKLK +I  +GT GNWISLPQKAGL RCGKSCRLRWLN
Sbjct: 1   MGRSPCCDKAIVKKGPWSPEEDAKLKAYIINHGTAGNWISLPQKAGLNRCGKSCRLRWLN 60

Query: 65  YLRPNIKHGGFTDEEDRIICTLFSTIGSRWSIIATQLPGRTDNDIKNHWNSKLKRKLIEM 124
           YLRPNIKHGGFTDEEDRIICTLFSTIGSRWSIIA+QLPGRTDNDIKNHWNSKLKRKLI M
Sbjct: 61  YLRPNIKHGGFTDEEDRIICTLFSTIGSRWSIIASQLPGRTDNDIKNHWNSKLKRKLIAM 120

Query: 125 EKKAQITTSRTIPSXXXXXXXXXXXXFSSQPLSSLINKHDDYFNDINYSNYNLSSPPTTI 184
           EKKAQ+    T+PS             SS P   L       + D N+S           
Sbjct: 121 EKKAQM---GTMPS------FHNHHQISSFPSQQL-------YQDSNFS----------- 180

Query: 185 KSFESLISSIPSNWSNNXXNISPSPCLVQTQET-TNLLSSNSLMYNHHNPLVQMKESCLL 244
            SFE+LISSIPSNWSN           +QT+ET +N L +NSLMYN +NP+V+      L
Sbjct: 181 -SFETLISSIPSNWSN-----------IQTKETNSNSLMNNSLMYN-NNPMVKQSS---L 221

Query: 245 GFGSEGSCSSSTSDGRSYTQINTTSGIMGF 274
           GFGSEG    ST DG SY QI T SGIMGF
Sbjct: 241 GFGSEG----STCDG-SYNQI-TPSGIMGF 221

[Close]

BLAST of CsaV3_1G013560 vs. NCBI nr
Match: XP_022970266.1 (transcription factor MYB87-like [Cucurbita maxima])

HSP 1 Score: 296.6 bits (758), Expect = 9.6e-77
Identity = 173/270 (64.07%), Postives = 190/270 (70.37%), Query Frame = 0


Query: 5   MGRSPCCDKSNVKKGPWSPEEDAKLKDFIDKNGTGGNWISLPQKAGLKRCGKSCRLRWLN 64
           MGRSPCCDK+ VKKGPWSPEEDAKLK +I  +GT GNWISLPQKAGL RCGKSCRLRWLN
Sbjct: 1   MGRSPCCDKAIVKKGPWSPEEDAKLKAYIMNHGTAGNWISLPQKAGLNRCGKSCRLRWLN 60

Query: 65  YLRPNIKHGGFTDEEDRIICTLFSTIGSRWSIIATQLPGRTDNDIKNHWNSKLKRKLIEM 124
           YLRPNIKHGGFTDEEDRIICTLF TIGSRWSIIA+QLPGRTDNDIKNHWNSKLKRKLI M
Sbjct: 61  YLRPNIKHGGFTDEEDRIICTLFCTIGSRWSIIASQLPGRTDNDIKNHWNSKLKRKLIAM 120

Query: 125 EKKAQITTSRTIPSXXXXXXXXXXXXFSSQPLSSLINKHDDYFNDINYSNYNLSSPPTTI 184
           EKKAQ+    T+PS             SS P   L       + D N+S           
Sbjct: 121 EKKAQM---GTMPS------FHNHHQISSFPSQQL-------YQDSNFS----------- 180

Query: 185 KSFESLISSIPSNWSNNXXNISPSPCLVQTQET-TNLLSSNSLMYNHHNPLVQMKESCLL 244
            SFE+LISSIPSNWSN           +QT+ET +N L +NSL YN +NP+V+      L
Sbjct: 181 -SFETLISSIPSNWSN-----------IQTKETSSNSLMNNSLTYN-NNPMVKQSS---L 221

Query: 245 GFGSEGSCSSSTSDGRSYTQINTTSGIMGF 274
           GFGSEG    ST DG SY QI T+SGIMGF
Sbjct: 241 GFGSEG----STCDG-SYNQI-TSSGIMGF 221

[Close]

BLAST of CsaV3_1G013560 vs. NCBI nr
Match: XP_022998892.1 (transcription factor MYB36-like [Cucurbita maxima])

HSP 1 Score: 286.6 bits (732), Expect = 9.9e-74
Identity = 163/272 (59.93%), Postives = 181/272 (66.54%), Query Frame = 0


Query: 5   MGRSPCCDKSNVKKGPWSPEEDAKLKDFIDKNGTGGNWISLPQKAGLKRCGKSCRLRWLN 64
           MGRSPCCDK+NVKKGPWSPEEDAKLK +I  +GTGGNWISLPQKAGLKRCGKSCRLRWLN
Sbjct: 1   MGRSPCCDKANVKKGPWSPEEDAKLKAYIHNHGTGGNWISLPQKAGLKRCGKSCRLRWLN 60

Query: 65  YLRPNIKHGGFTDEEDRIICTLFSTIGSRWSIIATQLPGRTDNDIKNHWNSKLKRKLIEM 124
           YLRPNIKHGGFT+EEDRIICTLFSTIGSRWSIIATQLPGRTDNDIKNHWNSKLK+KLI M
Sbjct: 61  YLRPNIKHGGFTEEEDRIICTLFSTIGSRWSIIATQLPGRTDNDIKNHWNSKLKKKLIGM 120

Query: 125 EKKAQITTSRTIPSXXXXXXXXXXXXFSSQPLSSLINKHDDYFNDINYSNYNLSSPPTTI 184
           EK  QI     IP              ++ P SS            +++++ +SS P   
Sbjct: 121 EKHPQI-----IP--------------TTMPYSS------------HHNDHQVSSFPA-- 180

Query: 185 KSFESLISSIPSNWSNNXXNISPSPCLVQTQETTNLLSSNSLMYNHHNPLVQMKESCLLG 244
                 +SSIPSNWSN+  NI  SPCLV TQE+      +SLMY H              
Sbjct: 181 ----QPLSSIPSNWSNDNDNI--SPCLVPTQESNMNSLLSSLMYQH-------------- 211

Query: 245 FGSEGSCSSSTSDGRSYTQINTTSGI--MGFQ 275
                   + T DGRS TQIN TS I  MGFQ
Sbjct: 241 --------NQTLDGRSCTQINNTSRIMMMGFQ 211

[Close]

BLAST of CsaV3_1G013560 vs. TAIR10
Match: AT5G65790.1 (myb domain protein 68)

HSP 1 Score: 230.7 bits (587), Expect = 1.2e-60
Identity = 98/123 (79.67%), Postives = 115/123 (93.50%), Query Frame = 0


Query: 5   MGRSPCCDKSNVKKGPWSPEEDAKLKDFIDKNGTGGNWISLPQKAGLKRCGKSCRLRWLN 64
           MGR+PCCDK+NVKKGPWSPEEDAKLKD+I+ +GTGGNWI+LPQK GL+RCGKSCRLRWLN
Sbjct: 1   MGRAPCCDKANVKKGPWSPEEDAKLKDYIENSGTGGNWIALPQKIGLRRCGKSCRLRWLN 60

Query: 65  YLRPNIKHGGFTDEEDRIICTLFSTIGSRWSIIATQLPGRTDNDIKNHWNSKLKRKLIEM 124
           YLRPNIKHGGF++EED IIC L+ TIGSRWSIIA QLPGRTDNDIKN+WN++LK+KL+  
Sbjct: 61  YLRPNIKHGGFSEEEDNIICNLYVTIGSRWSIIAAQLPGRTDNDIKNYWNTRLKKKLLNK 120

Query: 125 EKK 128
           ++K
Sbjct: 121 QRK 123

[Close]

BLAST of CsaV3_1G013560 vs. TAIR10
Match: AT5G57620.1 (myb domain protein 36)

HSP 1 Score: 229.6 bits (584), Expect = 2.6e-60
Identity = 100/123 (81.30%), Postives = 115/123 (93.50%), Query Frame = 0


Query: 5   MGRSPCCDKSNVKKGPWSPEEDAKLKDFIDKNGTGGNWISLPQKAGLKRCGKSCRLRWLN 64
           MGR+PCCDK+NVKKGPWSPEED KLKD+IDK GTGGNWI+LPQK GLKRCGKSCRLRWLN
Sbjct: 1   MGRAPCCDKANVKKGPWSPEEDVKLKDYIDKYGTGGNWIALPQKIGLKRCGKSCRLRWLN 60

Query: 65  YLRPNIKHGGFTDEEDRIICTLFSTIGSRWSIIATQLPGRTDNDIKNHWNSKLKRKLIEM 124
           YLRPNIKHGGF++EEDRII +L+ +IGSRWSIIA QLPGRTDNDIKN+WN+KLK+KL+  
Sbjct: 61  YLRPNIKHGGFSEEEDRIILSLYISIGSRWSIIAAQLPGRTDNDIKNYWNTKLKKKLLGR 120

Query: 125 EKK 128
           +K+
Sbjct: 121 QKQ 123

[Close]

BLAST of CsaV3_1G013560 vs. TAIR10
Match: AT3G49690.1 (myb domain protein 84)

HSP 1 Score: 227.3 bits (578), Expect = 1.3e-59
Identity = 97/122 (79.51%), Postives = 114/122 (93.44%), Query Frame = 0


Query: 5   MGRSPCCDKSNVKKGPWSPEEDAKLKDFIDKNGTGGNWISLPQKAGLKRCGKSCRLRWLN 64
           MGR+PCCDK+NVKKGPWSPEEDAKLK +I+ +GTGGNWI+LPQK GLKRCGKSCRLRWLN
Sbjct: 1   MGRAPCCDKANVKKGPWSPEEDAKLKSYIENSGTGGNWIALPQKIGLKRCGKSCRLRWLN 60

Query: 65  YLRPNIKHGGFTDEEDRIICTLFSTIGSRWSIIATQLPGRTDNDIKNHWNSKLKRKLIEM 124
           YLRPNIKHGGF++EE+ IIC+L+ TIGSRWSIIA QLPGRTDNDIKN+WN++LK+KLI  
Sbjct: 61  YLRPNIKHGGFSEEEENIICSLYLTIGSRWSIIAAQLPGRTDNDIKNYWNTRLKKKLINK 120

Query: 125 EK 127
           ++
Sbjct: 121 QR 122

[Close]

BLAST of CsaV3_1G013560 vs. TAIR10
Match: AT4G37780.1 (myb domain protein 87)

HSP 1 Score: 221.1 bits (562), Expect = 9.3e-58
Identity = 96/124 (77.42%), Postives = 112/124 (90.32%), Query Frame = 0


Query: 5   MGRSPCCDKSNVKKGPWSPEEDAKLKDFIDKNGTGGNWISLPQKAGLKRCGKSCRLRWLN 64
           MGR+PCCDK  VKKGPWS EEDA LK +I+K+GTG NWISLPQ+ G+KRCGKSCRLRWLN
Sbjct: 1   MGRAPCCDKMAVKKGPWSTEEDAVLKSYIEKHGTGNNWISLPQRIGIKRCGKSCRLRWLN 60

Query: 65  YLRPNIKHGGFTDEEDRIICTLFSTIGSRWSIIATQLPGRTDNDIKNHWNSKLKRKLIEM 124
           YLRPN+KHGGFTDEED IIC+L+ TIGSRWSIIA+QLPGRTDNDIKN+WN++LK+KL+  
Sbjct: 61  YLRPNLKHGGFTDEEDYIICSLYITIGSRWSIIASQLPGRTDNDIKNYWNTRLKKKLLSK 120

Query: 125 EKKA 129
           + KA
Sbjct: 121 QGKA 124

[Close]

BLAST of CsaV3_1G013560 vs. TAIR10
Match: AT2G36890.1 (Duplicated homeodomain-like superfamily protein)

HSP 1 Score: 214.2 bits (544), Expect = 1.1e-55
Identity = 91/114 (79.82%), Postives = 106/114 (92.98%), Query Frame = 0


Query: 5   MGRSPCCDKSNVKKGPWSPEEDAKLKDFIDKNGTGGNWISLPQKAGLKRCGKSCRLRWLN 64
           MGR+PCCDK+NVK+GPWSPEEDAKLKD+I+K GTGGNWI+LP KAGL+RCGKSCRLRWLN
Sbjct: 1   MGRAPCCDKANVKRGPWSPEEDAKLKDYIEKQGTGGNWIALPHKAGLRRCGKSCRLRWLN 60

Query: 65  YLRPNIKHGGFTDEEDRIICTLFSTIGSRWSIIATQLPGRTDNDIKNHWNSKLK 119
           YLRPNI+HG FT+EED II +LF++IGSRWS+IA  L GRTDNDIKN+WN+KLK
Sbjct: 61  YLRPNIRHGDFTEEEDNIIYSLFASIGSRWSVIAAHLQGRTDNDIKNYWNTKLK 114

[Close]

BLAST of CsaV3_1G013560 vs. Swiss-Prot
Match: sp|Q9FKL2|MYB36_ARATH (Transcription factor MYB36 OS=Arabidopsis thaliana OX=3702 GN=MYB36 PE=1 SV=1)

HSP 1 Score: 229.6 bits (584), Expect = 4.7e-59
Identity = 100/123 (81.30%), Postives = 115/123 (93.50%), Query Frame = 0


Query: 5   MGRSPCCDKSNVKKGPWSPEEDAKLKDFIDKNGTGGNWISLPQKAGLKRCGKSCRLRWLN 64
           MGR+PCCDK+NVKKGPWSPEED KLKD+IDK GTGGNWI+LPQK GLKRCGKSCRLRWLN
Sbjct: 1   MGRAPCCDKANVKKGPWSPEEDVKLKDYIDKYGTGGNWIALPQKIGLKRCGKSCRLRWLN 60

Query: 65  YLRPNIKHGGFTDEEDRIICTLFSTIGSRWSIIATQLPGRTDNDIKNHWNSKLKRKLIEM 124
           YLRPNIKHGGF++EEDRII +L+ +IGSRWSIIA QLPGRTDNDIKN+WN+KLK+KL+  
Sbjct: 61  YLRPNIKHGGFSEEEDRIILSLYISIGSRWSIIAAQLPGRTDNDIKNYWNTKLKKKLLGR 120

Query: 125 EKK 128
           +K+
Sbjct: 121 QKQ 123

[Close]

BLAST of CsaV3_1G013560 vs. Swiss-Prot
Match: sp|Q9M2Y9|RAX3_ARATH (Transcription factor RAX3 OS=Arabidopsis thaliana OX=3702 GN=RAX3 PE=2 SV=1)

HSP 1 Score: 227.3 bits (578), Expect = 2.3e-58
Identity = 97/122 (79.51%), Postives = 114/122 (93.44%), Query Frame = 0


Query: 5   MGRSPCCDKSNVKKGPWSPEEDAKLKDFIDKNGTGGNWISLPQKAGLKRCGKSCRLRWLN 64
           MGR+PCCDK+NVKKGPWSPEEDAKLK +I+ +GTGGNWI+LPQK GLKRCGKSCRLRWLN
Sbjct: 1   MGRAPCCDKANVKKGPWSPEEDAKLKSYIENSGTGGNWIALPQKIGLKRCGKSCRLRWLN 60

Query: 65  YLRPNIKHGGFTDEEDRIICTLFSTIGSRWSIIATQLPGRTDNDIKNHWNSKLKRKLIEM 124
           YLRPNIKHGGF++EE+ IIC+L+ TIGSRWSIIA QLPGRTDNDIKN+WN++LK+KLI  
Sbjct: 61  YLRPNIKHGGFSEEEENIICSLYLTIGSRWSIIAAQLPGRTDNDIKNYWNTRLKKKLINK 120

Query: 125 EK 127
           ++
Sbjct: 121 QR 122

[Close]

BLAST of CsaV3_1G013560 vs. Swiss-Prot
Match: sp|F4JSU0|MYB87_ARATH (Transcription factor MYB87 OS=Arabidopsis thaliana OX=3702 GN=MYB87 PE=2 SV=1)

HSP 1 Score: 221.1 bits (562), Expect = 1.7e-56
Identity = 96/124 (77.42%), Postives = 112/124 (90.32%), Query Frame = 0


Query: 5   MGRSPCCDKSNVKKGPWSPEEDAKLKDFIDKNGTGGNWISLPQKAGLKRCGKSCRLRWLN 64
           MGR+PCCDK  VKKGPWS EEDA LK +I+K+GTG NWISLPQ+ G+KRCGKSCRLRWLN
Sbjct: 1   MGRAPCCDKMAVKKGPWSTEEDAVLKSYIEKHGTGNNWISLPQRIGIKRCGKSCRLRWLN 60

Query: 65  YLRPNIKHGGFTDEEDRIICTLFSTIGSRWSIIATQLPGRTDNDIKNHWNSKLKRKLIEM 124
           YLRPN+KHGGFTDEED IIC+L+ TIGSRWSIIA+QLPGRTDNDIKN+WN++LK+KL+  
Sbjct: 61  YLRPNLKHGGFTDEEDYIICSLYITIGSRWSIIASQLPGRTDNDIKNYWNTRLKKKLLSK 120

Query: 125 EKKA 129
           + KA
Sbjct: 121 QGKA 124

[Close]

BLAST of CsaV3_1G013560 vs. Swiss-Prot
Match: sp|Q9SJL7|RAX2_ARATH (Transcription factor RAX2 OS=Arabidopsis thaliana OX=3702 GN=RAX2 PE=1 SV=1)

HSP 1 Score: 214.2 bits (544), Expect = 2.0e-54
Identity = 91/114 (79.82%), Postives = 106/114 (92.98%), Query Frame = 0


Query: 5   MGRSPCCDKSNVKKGPWSPEEDAKLKDFIDKNGTGGNWISLPQKAGLKRCGKSCRLRWLN 64
           MGR+PCCDK+NVK+GPWSPEEDAKLKD+I+K GTGGNWI+LP KAGL+RCGKSCRLRWLN
Sbjct: 1   MGRAPCCDKANVKRGPWSPEEDAKLKDYIEKQGTGGNWIALPHKAGLRRCGKSCRLRWLN 60

Query: 65  YLRPNIKHGGFTDEEDRIICTLFSTIGSRWSIIATQLPGRTDNDIKNHWNSKLK 119
           YLRPNI+HG FT+EED II +LF++IGSRWS+IA  L GRTDNDIKN+WN+KLK
Sbjct: 61  YLRPNIRHGDFTEEEDNIIYSLFASIGSRWSVIAAHLQGRTDNDIKNYWNTKLK 114

[Close]

BLAST of CsaV3_1G013560 vs. Swiss-Prot
Match: sp|Q9FG68|RAX1_ARATH (Transcription factor RAX1 OS=Arabidopsis thaliana OX=3702 GN=RAX1 PE=1 SV=1)

HSP 1 Score: 211.1 bits (536), Expect = 1.7e-53
Identity = 90/116 (77.59%), Postives = 106/116 (91.38%), Query Frame = 0


Query: 5   MGRSPCCDKSNVKKGPWSPEEDAKLKDFIDKNGTGGNWISLPQKAGLKRCGKSCRLRWLN 64
           MGR+PCCDK+ VK+GPWSPEED+KL+D+I+K G GGNWIS P KAGL+RCGKSCRLRWLN
Sbjct: 1   MGRAPCCDKTKVKRGPWSPEEDSKLRDYIEKYGNGGNWISFPLKAGLRRCGKSCRLRWLN 60

Query: 65  YLRPNIKHGGFTDEEDRIICTLFSTIGSRWSIIATQLPGRTDNDIKNHWNSKLKRK 121
           YLRPNIKHG F++EEDRII +LF+ IGSRWSIIA  LPGRTDNDIKN+WN+KL++K
Sbjct: 61  YLRPNIKHGDFSEEEDRIIFSLFAAIGSRWSIIAAHLPGRTDNDIKNYWNTKLRKK 116

[Close]

BLAST of CsaV3_1G013560 vs. TrEMBL
Match: tr|A0A0A0LUZ6|A0A0A0LUZ6_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G109320 PE=4 SV=1)

HSP 1 Score: 535.4 bits (1378), Expect = 8.1e-149
Identity = 294/294 (100.00%), Postives = 294/294 (100.00%), Query Frame = 0


Query: 5   MGRSPCCDKSNVKKGPWSPEEDAKLKDFIDKNGTGGNWISLPQKAGLKRCGKSCRLRWLN 64
           MGRSPCCDKSNVKKGPWSPEEDAKLKDFIDKNGTGGNWISLPQKAGLKRCGKSCRLRWLN
Sbjct: 1   MGRSPCCDKSNVKKGPWSPEEDAKLKDFIDKNGTGGNWISLPQKAGLKRCGKSCRLRWLN 60

Query: 65  YLRPNIKHGGFTDEEDRIICTLFSTIGSRWSIIATQLPGRTDNDIKNHWNSKLKRKLIEM 124
           YLRPNIKHGGFTDEEDRIICTLFSTIGSRWSIIATQLPGRTDNDIKNHWNSKLKRKLIEM
Sbjct: 61  YLRPNIKHGGFTDEEDRIICTLFSTIGSRWSIIATQLPGRTDNDIKNHWNSKLKRKLIEM 120

Query: 125 EKKAQITTSRTIPSXXXXXXXXXXXXFSSQPLSSLINKHDDYFNDINYSNYNLSSPPTTI 184
           EKKAQITTSRTIPSXXXXXXXXXXXXFSSQPLSSLINKHDDYFNDINYSNYNLSSPPTTI
Sbjct: 121 EKKAQITTSRTIPSXXXXXXXXXXXXFSSQPLSSLINKHDDYFNDINYSNYNLSSPPTTI 180

Query: 185 KSFESLISSIPSNWSNNXXNISPSPCLVQTQETTNLLSSNSLMYNHHNPLVQMKESCLLG 244
           KSFESLISSIPSNWSNNXXNISPSPCLVQTQETTNLLSSNSLMYNHHNPLVQMKESCLLG
Sbjct: 181 KSFESLISSIPSNWSNNXXNISPSPCLVQTQETTNLLSSNSLMYNHHNPLVQMKESCLLG 240

Query: 245 FGSEGSCSSSTSDGRSYTQINTTSGIMGFQXXXXXXXXXXXXXXXXNIMNYINH 299
           FGSEGSCSSSTSDGRSYTQINTTSGIMGFQXXXXXXXXXXXXXXXXNIMNYINH
Sbjct: 241 FGSEGSCSSSTSDGRSYTQINTTSGIMGFQXXXXXXXXXXXXXXXXNIMNYINH 294

[Close]

BLAST of CsaV3_1G013560 vs. TrEMBL
Match: tr|A0A2P6QGY2|A0A2P6QGY2_ROSCH (Putative transcription factor MYB-HB-like family OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr5g0057501 PE=4 SV=1)

HSP 1 Score: 259.2 bits (661), Expect = 1.1e-65
Identity = 153/274 (55.84%), Postives = 183/274 (66.79%), Query Frame = 0


Query: 5   MGRSPCCDKSNVKKGPWSPEEDAKLKDFIDKNGTGGNWISLPQKAGLKRCGKSCRLRWLN 64
           MGR+PCCDK+NVKKGPWSPEED+KLK++IDK GTGGNWI+LPQKAGLKRCGKSCRLRWLN
Sbjct: 1   MGRAPCCDKANVKKGPWSPEEDSKLKEYIDKYGTGGNWIALPQKAGLKRCGKSCRLRWLN 60

Query: 65  YLRPNIKHGGFTDEEDRIICTLFSTIGSRWSIIATQLPGRTDNDIKNHWNSKLKRKLIEM 124
           YLRPNIKHG F++EEDRIICTLF++IGSRWSIIA QLPGRTDNDIKN+WN+KLK+KL +M
Sbjct: 61  YLRPNIKHGEFSEEEDRIICTLFTSIGSRWSIIAAQLPGRTDNDIKNYWNTKLKKKLRDM 120

Query: 125 E---KKAQITTSRTIPS------XXXXXXXXXXXXFSSQPLSSLINKHDDYFNDINYSNY 184
           +       +TTS++  S                  F  QPLS +   H D  N + YS Y
Sbjct: 121 QTHMAPPSLTTSQSHRSNPPPFPVSSSLHQFQNQPFHHQPLSLM---HKD-LNMMTYSTY 180

Query: 185 NLS-SPPTTIKSFESLISSIPSNWSNNXXNISPSPCLVQTQETTNLLSSNSLMYNHHNPL 244
             + + P T  SF S    +P N SN   N S    L QTQE        S+ YNH  P 
Sbjct: 181 TPTLTSPATPGSFSSGFEIMP-NISNPLTNYS---SLFQTQECL----VGSMHYNH--PA 240

Query: 245 VQMKESCLLGFGSEGSCSSSTSDGRSYTQINTTS 269
           V+ K   L+ FGSEGSCS+S+    +  QI+  S
Sbjct: 241 VK-KNLNLIMFGSEGSCSTSSDGSCNNNQISYES 259

[Close]

BLAST of CsaV3_1G013560 vs. TrEMBL
Match: tr|A0A2P4M0T2|A0A2P4M0T2_QUESU (Transcription factor myb36 OS=Quercus suber OX=58331 GN=CFP56_33206 PE=4 SV=1)

HSP 1 Score: 255.8 bits (652), Expect = 1.2e-64
Identity = 156/277 (56.32%), Postives = 187/277 (67.51%), Query Frame = 0


Query: 5   MGRSPCCDKSNVKKGPWSPEEDAKLKDFIDKNGTGGNWISLPQKAGLKRCGKSCRLRWLN 64
           MGR+PCCDK+NVKKGPWSPEED+KLK++I+K GTGGNWI+LPQKAGLKRCGKSCRLRWLN
Sbjct: 1   MGRAPCCDKANVKKGPWSPEEDSKLKEYIEKYGTGGNWIALPQKAGLKRCGKSCRLRWLN 60

Query: 65  YLRPNIKHGGFTDEEDRIICTLFSTIGSRWSIIATQLPGRTDNDIKNHWNSKLKRKLIEM 124
           YLRPNIKHG F+DEEDRIICTLF++IGSRWSIIA QLPGRTDNDIKN+WN+KLK+KL+ M
Sbjct: 61  YLRPNIKHGEFSDEEDRIICTLFASIGSRWSIIAAQLPGRTDNDIKNYWNTKLKKKLMGM 120

Query: 125 EKKAQITTSRTIPSXXXXXXXXXXXXFSSQPLSSLINKHDDYFNDINYSNYNLSSPPTTI 184
              +Q       PS            F SQPLS         + + + S Y+    PTT 
Sbjct: 121 LPPSQ-RKPPPFPS------PHQGPPFQSQPLS---------YKECSLSYYS----PTTT 180

Query: 185 KSFESLIS-SIPSNWSNNXXNISPS--PCLVQTQETTNLLSSNSLMYNHHNPLVQMKESC 244
           KSF  L S S+P N+SN   +++ +    L QTQE+       S+ Y        +KE+ 
Sbjct: 181 KSFSGLESMSVPLNFSNTTTSLATNNPSSLFQTQESW----LGSMQY------YPVKEN- 240

Query: 245 LLGFGSEGSCSSSTSDGRSYTQINTTSGI----MGFQ 275
           LL FGSEGS  SS SDG S TQI+    +    MGFQ
Sbjct: 241 LLMFGSEGSTCSS-SDG-SCTQISYGRVVKQEEMGFQ 244

[Close]

BLAST of CsaV3_1G013560 vs. TrEMBL
Match: tr|A0A2I4HRK9|A0A2I4HRK9_9ROSI (transcription factor RAX2-like OS=Juglans regia OX=51240 GN=LOC109020704 PE=4 SV=1)

HSP 1 Score: 253.8 bits (647), Expect = 4.7e-64
Identity = 153/279 (54.84%), Postives = 185/279 (66.31%), Query Frame = 0


Query: 5   MGRSPCCDKSNVKKGPWSPEEDAKLKDFIDKNGTGGNWISLPQKAGLKRCGKSCRLRWLN 64
           MGR+PCCDK+NVKKGPWSPEED+KLK++I K GTGGNWI+LPQKAGLKRCGKSCRLRWLN
Sbjct: 1   MGRAPCCDKANVKKGPWSPEEDSKLKEYIQKYGTGGNWIALPQKAGLKRCGKSCRLRWLN 60

Query: 65  YLRPNIKHGGFTDEEDRIICTLFSTIGSRWSIIATQLPGRTDNDIKNHWNSKLKRKL--- 124
           YLRPNIKHG F+DEEDRIIC LF++IGSRWSIIA QLPGRTDNDIKN+WN+KLK+KL   
Sbjct: 61  YLRPNIKHGEFSDEEDRIICALFASIGSRWSIIAAQLPGRTDNDIKNYWNTKLKKKLFMG 120

Query: 125 IEMEKKAQITTSRTIPSXXXXXXXXXXXXFSSQPLSSLINKHDDYFNDINYSNYNLSSPP 184
           +  + +    +S   P             F +QPLSS + K          S+Y  S   
Sbjct: 121 MHPQSERPFQSSHQTP------------PFQTQPLSSSLYK--------ECSSYYTS--- 180

Query: 185 TTIKSFESL--ISSIPSNWSNNXXNISPSPCLVQTQETTNLLSSNSLMYNHHNPLVQMKE 244
            T KSF  L   +SIP ++ ++  +++  P + QTQE     S  S M  +      +KE
Sbjct: 181 -TTKSFSGLDPSTSIPPSFLSSSTSLATHPSVFQTQE-----SRASFMQYY-----PVKE 240

Query: 245 SCLLGFGSEGSCSSSTSDGRSYTQINTTSGI----MGFQ 275
           + LL FGSEGSCSS  SDG S TQI+   GI    M FQ
Sbjct: 241 N-LLMFGSEGSCSS--SDG-SCTQISYGRGIKQEVMAFQ 241

[Close]

BLAST of CsaV3_1G013560 vs. TrEMBL
Match: tr|A0A2I4HB03|A0A2I4HB03_9ROSI (transcription factor RAX2-like OS=Juglans regia OX=51240 GN=LOC109015309 PE=4 SV=1)

HSP 1 Score: 253.1 bits (645), Expect = 8.0e-64
Identity = 145/268 (54.10%), Postives = 176/268 (65.67%), Query Frame = 0


Query: 5   MGRSPCCDKSNVKKGPWSPEEDAKLKDFIDKNGTGGNWISLPQKAGLKRCGKSCRLRWLN 64
           MGR+PCCDK+NVKKGPWSPEED+KLK++I+K GTGGNWI+ PQKAGLKRCGKSCRLRWLN
Sbjct: 1   MGRAPCCDKANVKKGPWSPEEDSKLKEYIEKYGTGGNWIAFPQKAGLKRCGKSCRLRWLN 60

Query: 65  YLRPNIKHGGFTDEEDRIICTLFSTIGSRWSIIATQLPGRTDNDIKNHWNSKLKRKLIEM 124
           YLRPNIKHG F+DEEDR ICTLF+ IGSRWSIIA QLPGRTDNDIKN+WN+KLK+KL+ M
Sbjct: 61  YLRPNIKHGEFSDEEDRTICTLFANIGSRWSIIAAQLPGRTDNDIKNYWNTKLKKKLMGM 120

Query: 125 -----EKKAQITTSRTIPSXXXXXXXXXXXXFSSQPL-SSLINKHDDYFNDINYSNYNLS 184
                 K A   +S  IP             F SQPL SSL  +   Y+           
Sbjct: 121 HLPPQRKLAPFASSSQIP------------PFQSQPLSSSLYEECSSYY----------- 180

Query: 185 SPPTTIKSFESLIS-SIPSNWSNNXXNISPSPCLVQTQETTNLLSSNSLMYNHHNPLVQM 244
                 KSF  L + S PSN+ ++  +++ +P + QT E  + +SS         P   +
Sbjct: 181 ------KSFSGLEAISFPSNYLSSSTSLATNPSIFQTHE--SCVSS--------MPYYPV 226

Query: 245 KESCLLGFGSEGSCSSSTSDGRSYTQIN 266
            E+ L+ FGSEGSC S  SD  S TQI+
Sbjct: 241 NENVLM-FGSEGSCRS--SDDGSCTQIS 226

The following BLAST results are available for this feature:

BLAST of CsaV3_1G013560 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN64809.1	1.2e-148	100.00	hypothetical protein Csa_1G109320 [Cucumis sativus]	[more]
XP_023520293.1	6.6e-78	64.07	transcription factor MYB87-like [Cucurbita pepo subsp. pepo]	[more]
XP_022964958.1	8.6e-78	64.81	transcription factor MYB87-like [Cucurbita moschata]	[more]
XP_022970266.1	9.6e-77	64.07	transcription factor MYB87-like [Cucurbita maxima]	[more]
XP_022998892.1	9.9e-74	59.93	transcription factor MYB36-like [Cucurbita maxima]	[more]

BLAST of CsaV3_1G013560 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G65790.1	1.2e-60	79.67	myb domain protein 68	[more]
AT5G57620.1	2.6e-60	81.30	myb domain protein 36	[more]
AT3G49690.1	1.3e-59	79.51	myb domain protein 84	[more]
AT4G37780.1	9.3e-58	77.42	myb domain protein 87	[more]
AT2G36890.1	1.1e-55	79.82	Duplicated homeodomain-like superfamily protein	[more]

BLAST of CsaV3_1G013560 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9FKL2\|MYB36_ARATH	4.7e-59	81.30	Transcription factor MYB36 OS=Arabidopsis thaliana OX=3702 GN=MYB36 PE=1 SV=1	[more]
sp\|Q9M2Y9\|RAX3_ARATH	2.3e-58	79.51	Transcription factor RAX3 OS=Arabidopsis thaliana OX=3702 GN=RAX3 PE=2 SV=1	[more]
sp\|F4JSU0\|MYB87_ARATH	1.7e-56	77.42	Transcription factor MYB87 OS=Arabidopsis thaliana OX=3702 GN=MYB87 PE=2 SV=1	[more]
sp\|Q9SJL7\|RAX2_ARATH	2.0e-54	79.82	Transcription factor RAX2 OS=Arabidopsis thaliana OX=3702 GN=RAX2 PE=1 SV=1	[more]
sp\|Q9FG68\|RAX1_ARATH	1.7e-53	77.59	Transcription factor RAX1 OS=Arabidopsis thaliana OX=3702 GN=RAX1 PE=1 SV=1	[more]

BLAST of CsaV3_1G013560 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0LUZ6\|A0A0A0LUZ6_CUCSA	8.1e-149	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G109320 PE=4 SV=1	[more]
tr\|A0A2P6QGY2\|A0A2P6QGY2_ROSCH	1.1e-65	55.84	Putative transcription factor MYB-HB-like family OS=Rosa chinensis OX=74649 GN=R...	[more]
tr\|A0A2P4M0T2\|A0A2P4M0T2_QUESU	1.2e-64	56.32	Transcription factor myb36 OS=Quercus suber OX=58331 GN=CFP56_33206 PE=4 SV=1	[more]
tr\|A0A2I4HRK9\|A0A2I4HRK9_9ROSI	4.7e-64	54.84	transcription factor RAX2-like OS=Juglans regia OX=51240 GN=LOC109020704 PE=4 SV...	[more]
tr\|A0A2I4HB03\|A0A2I4HB03_9ROSI	8.0e-64	54.10	transcription factor RAX2-like OS=Juglans regia OX=51240 GN=LOC109015309 PE=4 SV...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0003677	DNA binding

Vocabulary: **INTERPRO**
Term	Definition
IPR009057	Homeobox-like_sf
IPR017930	Myb_dom
IPR001005	SANT/Myb

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003677	DNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_1G013560.1	CsaV3_1G013560.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 114..134
None	No IPR available	GENE3D	G3DSA:1.10.10.60		coord: 11..72 e-value: 7.1E-19 score: 69.3
None	No IPR available	GENE3D	G3DSA:1.10.10.60		coord: 74..146 e-value: 2.3E-19 score: 71.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..23
None	No IPR available	PANTHER	PTHR10641	MYB-LIKE DNA-BINDING PROTEIN MYB	coord: 5..255
None	No IPR available	PANTHER	PTHR10641:SF654	TRANSCRIPTION FACTOR RAX2-RELATED	coord: 5..255
IPR001005	SANT/Myb domain	SMART	SM00717	sant	coord: 71..119 e-value: 1.6E-11 score: 54.3 coord: 17..68 e-value: 1.1E-10 score: 51.5
IPR001005	SANT/Myb domain	PFAM	PF00249	Myb_DNA-binding	coord: 18..66 e-value: 4.1E-14 score: 52.4 coord: 73..115 e-value: 4.6E-11 score: 42.6
IPR001005	SANT/Myb domain	CDD	cd00167	SANT	coord: 20..66 e-value: 2.59309E-7 score: 45.6442
IPR001005	SANT/Myb domain	CDD	cd00167	SANT	coord: 75..117 e-value: 1.13728E-7 score: 46.4146
IPR017930	Myb domain	PROSITE	PS51294	HTH_MYB	coord: 13..66 score: 14.68
IPR017930	Myb domain	PROSITE	PS51294	HTH_MYB	coord: 67..121 score: 22.498
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	SSF46689	Homeodomain-like	coord: 15..113

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsaV3_1G013560	CSPI01G13370	Wild cucumber (PI 183967)	cpicucB001
CsaV3_1G013560	Cucsa.292610	Cucumber (Gy14) v1	cgycucB453
CsaV3_1G013560	CmaCh01G005130	Cucurbita maxima (Rimu)	cmacucB0518
CsaV3_1G013560	CmaCh13G002390	Cucurbita maxima (Rimu)	cmacucB0234
CsaV3_1G013560	CmoCh13G002400	Cucurbita moschata (Rifu)	cmocucB0221
CsaV3_1G013560	CmoCh01G005450	Cucurbita moschata (Rifu)	cmocucB0505
CsaV3_1G013560	Cp4.1LG20g07170	Cucurbita pepo (Zucchini)	cpecucB0635
CsaV3_1G013560	Cp4.1LG02g12550	Cucurbita pepo (Zucchini)	cpecucB0657
CsaV3_1G013560	CsGy1G013470	Cucumber (Gy14) v2	cgybcucB002
CsaV3_1G013560	Carg12289	Silver-seed gourd	carcucB0474
CsaV3_1G013560	Cla005093	Watermelon (97103) v1	cucwmB015
CsaV3_1G013560	MELO3C004947	Melon (DHL92) v3.5.1	cucmeB010
CsaV3_1G013560	ClCG03G002780	Watermelon (Charleston Gray)	cucwcgB040
CsaV3_1G013560	Lsi03G000120	Bottle gourd (USVL1VR-Ls)	cuclsiB048
CsaV3_1G013560	MELO3C004947.2	Melon (DHL92) v3.6.1	cucmedB009
CsaV3_1G013560	Cla97C03G053830	Watermelon (97103) v2	cucwmbB032

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CsaV3_1G013560	CsaV3_3G036040	Cucumber (Chinese Long) v3	cuccucB021

The following block(s) are covering this gene:


Gene	Organism	Block
CsaV3_1G013560	Wax gourd	cucwgoB017
CsaV3_1G013560	Wax gourd	cucwgoB051
CsaV3_1G013560	Silver-seed gourd	carcucB0363
CsaV3_1G013560	Silver-seed gourd	carcucB1116
CsaV3_1G013560	Bottle gourd (USVL1VR-Ls)	cuclsiB054