Csa3G740800 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa3G740800
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionMyb transcription factor-like protein; contains IPR009057 (Homeodomain-like)
LocationChr3 : 28730779 .. 28731810 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
AGAGAGAGAGAGAAATGGGTAGAACTCCATGTTGTGATAAAGCAAATGTGAAGAAAGGACCATGGTCTCCTGAGGAAGATGCAAAGCTCAAAGATTACATTCAAAAACATGGAACTGGTGGCAATTGGATTTCTCTCCCACAAAAAGCTGGTAATTATTAATCTTTTTCTATCTTGATTTTGATAAAGTCTCGCTTCCTTTTTTATCCATATATATGAAGCAAAGGAGATTCGAACTTTTTCTGCTAACAACGACAGTAACATATTGGTCAATTTTTTTTGTTGAAAAAGATATATTTAGCCGATTTTATGATCAGGTATTTAATTTTGTTGAACTATATATGCTCATGTTGGAGTTAATTTGTTGTGTTTAGGTTTAAAGAGATGTGGGAAAAGTTGTAGATTGAGATGGTTAAATTATCTGAGACCTGATATCAAACATGGAGATTTTTCTGAGGAAGAAGATACAATAATTTGCAATCTCTATACTACCATTGGAAGCAGGTTCCTGTTTCATTCTCTCTTTCACCATCTTTATCACTATTTTTTTTTCACTCTCTCTCTCTCTTGTAATTTGATTCATAGTTATCCTTATGTGTGTCCACATACTTAATTAATTATGAAAAAAATGCTTGATGTTGAATTATTTACTTGTTTATTCACATGATATATATATGACAAATTATGTTTATTAATCTGTCAAGGAAAAAGTTCAAACTGCACATTTTGATATAAACAAGAAAAGAAAAAAAAGATTCAAACTCCTAGTTTAACTCAACTGATCATATAAGTTTGTAGGATACTCAAGTAAAAGGTTCGTTACTTGCCTTTCCATATATATTCAGAAAAGAAAACAATTTATCCAACAAAAAAACAGTAATTGCACTTTAGATAATTATTTCCATACTCTACCAGCTCAGGTTTTTTTTTTTTTTTTTCTTTTCTGTATAGAACAATCTTGGGAGAGGTGAATATTTTTAGAGTTGTTTGGAATATAATTATGATTTCATATAATTGCTTGAGAAGTAATTGA

mRNA sequence

ATGGGTAGAACTCCATGTTGTGATAAAGCAAATGTGAAGAAAGGACCATGGTCTCCTGAGGAAGATGCAAAGCTCAAAGATTACATTCAAAAACATGGAACTGGTGGCAATTGGATTTCTCTCCCACAAAAAGCTGGTTTAAAGAGATGTGGGAAAAGTTGTAGATTGAGATGGTTAAATTATCTGAGACCTGATATCAAACATGGAGATTTTTCTGAGGAAGAAGATACAATAATTTGCAATCTCTATACTACCATTGGAAGCAGAACAATCTTGGGAGAGGTGAATATTTTTAGAGTTGTTTGGAATATAATTATGATTTCATATAATTGCTTGAGAAGTAATTGA

Coding sequence (CDS)

ATGGGTAGAACTCCATGTTGTGATAAAGCAAATGTGAAGAAAGGACCATGGTCTCCTGAGGAAGATGCAAAGCTCAAAGATTACATTCAAAAACATGGAACTGGTGGCAATTGGATTTCTCTCCCACAAAAAGCTGGTTTAAAGAGATGTGGGAAAAGTTGTAGATTGAGATGGTTAAATTATCTGAGACCTGATATCAAACATGGAGATTTTTCTGAGGAAGAAGATACAATAATTTGCAATCTCTATACTACCATTGGAAGCAGAACAATCTTGGGAGAGGTGAATATTTTTAGAGTTGTTTGGAATATAATTATGATTTCATATAATTGCTTGAGAAGTAATTGA

Protein sequence

MGRTPCCDKANVKKGPWSPEEDAKLKDYIQKHGTGGNWISLPQKAGLKRCGKSCRLRWLNYLRPDIKHGDFSEEEDTIICNLYTTIGSRTILGEVNIFRVVWNIIMISYNCLRSN*
Homology
[Close]
BLAST of Csa3G740800 vs. Swiss-Prot
Match: RAX3_ARATH (Transcription factor RAX3 OS=Arabidopsis thaliana GN=RAX3 PE=2 SV=1)

HSP 1 Score: 172.2 bits (435), Expect = 3.4e-42
Identity = 76/89 (85.39%), Postives = 80/89 (89.89%), Query Frame = 1 

Query: 1  MGRTPCCDKANVKKGPWSPEEDAKLKDYIQKHGTGGNWISLPQKAGLKRCGKSCRLRWLN 60
          MGR PCCDKANVKKGPWSPEEDAKLK YI+  GTGGNWI+LPQK GLKRCGKSCRLRWLN
Sbjct: 1  MGRAPCCDKANVKKGPWSPEEDAKLKSYIENSGTGGNWIALPQKIGLKRCGKSCRLRWLN 60

Query: 61 YLRPDIKHGDFSEEEDTIICNLYTTIGSR 90
          YLRP+IKHG FSEEE+ IIC+LY TIGSR
Sbjct: 61 YLRPNIKHGGFSEEEENIICSLYLTIGSR 89

[Close]
BLAST of Csa3G740800 vs. Swiss-Prot
Match: MYB36_ARATH (Transcription factor MYB36 OS=Arabidopsis thaliana GN=MYB36 PE=1 SV=1)

HSP 1 Score: 171.0 bits (432), Expect = 7.6e-42
Identity = 76/89 (85.39%), Postives = 80/89 (89.89%), Query Frame = 1 

Query: 1  MGRTPCCDKANVKKGPWSPEEDAKLKDYIQKHGTGGNWISLPQKAGLKRCGKSCRLRWLN 60
          MGR PCCDKANVKKGPWSPEED KLKDYI K+GTGGNWI+LPQK GLKRCGKSCRLRWLN
Sbjct: 1  MGRAPCCDKANVKKGPWSPEEDVKLKDYIDKYGTGGNWIALPQKIGLKRCGKSCRLRWLN 60

Query: 61 YLRPDIKHGDFSEEEDTIICNLYTTIGSR 90
          YLRP+IKHG FSEEED II +LY +IGSR
Sbjct: 61 YLRPNIKHGGFSEEEDRIILSLYISIGSR 89

[Close]
BLAST of Csa3G740800 vs. Swiss-Prot
Match: RAX2_ARATH (Transcription factor RAX2 OS=Arabidopsis thaliana GN=RAX2 PE=1 SV=1)

HSP 1 Score: 169.5 bits (428), Expect = 2.2e-41
Identity = 73/89 (82.02%), Postives = 82/89 (92.13%), Query Frame = 1 

Query: 1  MGRTPCCDKANVKKGPWSPEEDAKLKDYIQKHGTGGNWISLPQKAGLKRCGKSCRLRWLN 60
          MGR PCCDKANVK+GPWSPEEDAKLKDYI+K GTGGNWI+LP KAGL+RCGKSCRLRWLN
Sbjct: 1  MGRAPCCDKANVKRGPWSPEEDAKLKDYIEKQGTGGNWIALPHKAGLRRCGKSCRLRWLN 60

Query: 61 YLRPDIKHGDFSEEEDTIICNLYTTIGSR 90
          YLRP+I+HGDF+EEED II +L+ +IGSR
Sbjct: 61 YLRPNIRHGDFTEEEDNIIYSLFASIGSR 89

[Close]
BLAST of Csa3G740800 vs. Swiss-Prot
Match: RAX1_ARATH (Transcription factor RAX1 OS=Arabidopsis thaliana GN=RAX1 PE=2 SV=1)

HSP 1 Score: 162.5 bits (410), Expect = 2.7e-39
Identity = 70/89 (78.65%), Postives = 78/89 (87.64%), Query Frame = 1 

Query: 1  MGRTPCCDKANVKKGPWSPEEDAKLKDYIQKHGTGGNWISLPQKAGLKRCGKSCRLRWLN 60
          MGR PCCDK  VK+GPWSPEED+KL+DYI+K+G GGNWIS P KAGL+RCGKSCRLRWLN
Sbjct: 1  MGRAPCCDKTKVKRGPWSPEEDSKLRDYIEKYGNGGNWISFPLKAGLRRCGKSCRLRWLN 60

Query: 61 YLRPDIKHGDFSEEEDTIICNLYTTIGSR 90
          YLRP+IKHGDFSEEED II +L+  IGSR
Sbjct: 61 YLRPNIKHGDFSEEEDRIIFSLFAAIGSR 89

[Close]
BLAST of Csa3G740800 vs. Swiss-Prot
Match: MYB80_ARATH (Transcription factor MYB80 OS=Arabidopsis thaliana GN=MYB80 PE=1 SV=1)

HSP 1 Score: 129.0 bits (323), Expect = 3.3e-29
Identity = 56/89 (62.92%), Postives = 68/89 (76.40%), Query Frame = 1 

Query: 1  MGRTPCCDKANVKKGPWSPEEDAKLKDYIQKHGTGGNWISLPQKAGLKRCGKSCRLRWLN 60
          MGR PCC+K NVK+G W+PEED KL  YI +HGT  NW  +P+ AGL+RCGKSCRLRW N
Sbjct: 1  MGRIPCCEKENVKRGQWTPEEDNKLASYIAQHGTR-NWRLIPKNAGLQRCGKSCRLRWTN 60

Query: 61 YLRPDIKHGDFSEEEDTIICNLYTTIGSR 90
          YLRPD+KHG FSE E+ II   ++ +G+R
Sbjct: 61 YLRPDLKHGQFSEAEEHIIVKFHSVLGNR 88

[Close]
BLAST of Csa3G740800 vs. TrEMBL
Match: A0A0A0LB23_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G740800 PE=4 SV=1)

HSP 1 Score: 250.8 bits (639), Expect = 8.4e-64
Identity = 115/115 (100.00%), Postives = 115/115 (100.00%), Query Frame = 1 

Query: 1   MGRTPCCDKANVKKGPWSPEEDAKLKDYIQKHGTGGNWISLPQKAGLKRCGKSCRLRWLN 60
           MGRTPCCDKANVKKGPWSPEEDAKLKDYIQKHGTGGNWISLPQKAGLKRCGKSCRLRWLN
Sbjct: 1   MGRTPCCDKANVKKGPWSPEEDAKLKDYIQKHGTGGNWISLPQKAGLKRCGKSCRLRWLN 60

Query: 61  YLRPDIKHGDFSEEEDTIICNLYTTIGSRTILGEVNIFRVVWNIIMISYNCLRSN 116
           YLRPDIKHGDFSEEEDTIICNLYTTIGSRTILGEVNIFRVVWNIIMISYNCLRSN
Sbjct: 61  YLRPDIKHGDFSEEEDTIICNLYTTIGSRTILGEVNIFRVVWNIIMISYNCLRSN 115

[Close]
BLAST of Csa3G740800 vs. TrEMBL
Match: A0A067JYX0_JATCU (MYB family protein OS=Jatropha curcas GN=JCGZ_16555 PE=4 SV=1)

HSP 1 Score: 179.9 bits (455), Expect = 1.8e-42
Identity = 78/89 (87.64%), Postives = 84/89 (94.38%), Query Frame = 1 

Query: 1  MGRTPCCDKANVKKGPWSPEEDAKLKDYIQKHGTGGNWISLPQKAGLKRCGKSCRLRWLN 60
          MGR PCCDKANVKKGPW+PEEDAKLK+YI+KHGTGGNWISLPQKAGLKRCGKSCRLRWLN
Sbjct: 1  MGRAPCCDKANVKKGPWAPEEDAKLKEYIEKHGTGGNWISLPQKAGLKRCGKSCRLRWLN 60

Query: 61 YLRPDIKHGDFSEEEDTIICNLYTTIGSR 90
          YLRP+IKHGDFS++ED IIC LY  IGSR
Sbjct: 61 YLRPNIKHGDFSDDEDRIICTLYANIGSR 89

[Close]
BLAST of Csa3G740800 vs. TrEMBL
Match: A0A0B2PH60_GLYSO (Transcription factor RAX2 OS=Glycine soja GN=glysoja_037621 PE=4 SV=1)

HSP 1 Score: 179.1 bits (453), Expect = 3.1e-42
Identity = 77/89 (86.52%), Postives = 85/89 (95.51%), Query Frame = 1 

Query: 1  MGRTPCCDKANVKKGPWSPEEDAKLKDYIQKHGTGGNWISLPQKAGLKRCGKSCRLRWLN 60
          MGR PCCDKANVK+GPWSPEED+KLKDYI+KHGTGGNWI+LPQKAGLKRCGKSCRLRWLN
Sbjct: 1  MGRAPCCDKANVKRGPWSPEEDSKLKDYIEKHGTGGNWIALPQKAGLKRCGKSCRLRWLN 60

Query: 61 YLRPDIKHGDFSEEEDTIICNLYTTIGSR 90
          YLRP+IKHG+FS+EED IIC+LY  IGSR
Sbjct: 61 YLRPNIKHGEFSDEEDRIICSLYANIGSR 89

[Close]
BLAST of Csa3G740800 vs. TrEMBL
Match: A0A078JA03_BRANA (BnaC09g50990D protein OS=Brassica napus GN=BnaC09g50990D PE=4 SV=1)

HSP 1 Score: 179.1 bits (453), Expect = 3.1e-42
Identity = 79/89 (88.76%), Postives = 83/89 (93.26%), Query Frame = 1 

Query: 1  MGRTPCCDKANVKKGPWSPEEDAKLKDYIQKHGTGGNWISLPQKAGLKRCGKSCRLRWLN 60
          MGR PCCDKANVKKGPWSPEEDAKLKDYI+  GTGGNWI+LPQK GL+RCGKSCRLRWLN
Sbjct: 1  MGRAPCCDKANVKKGPWSPEEDAKLKDYIENSGTGGNWIALPQKIGLRRCGKSCRLRWLN 60

Query: 61 YLRPDIKHGDFSEEEDTIICNLYTTIGSR 90
          YLRP+IKHG FSEEEDTIICNLY TIGSR
Sbjct: 61 YLRPNIKHGGFSEEEDTIICNLYVTIGSR 89

[Close]
BLAST of Csa3G740800 vs. TrEMBL
Match: A0A0B2QP46_GLYSO (Transcription factor RAX3 OS=Glycine soja GN=glysoja_021072 PE=4 SV=1)

HSP 1 Score: 179.1 bits (453), Expect = 3.1e-42
Identity = 77/89 (86.52%), Postives = 85/89 (95.51%), Query Frame = 1 

Query: 1  MGRTPCCDKANVKKGPWSPEEDAKLKDYIQKHGTGGNWISLPQKAGLKRCGKSCRLRWLN 60
          MGR PCCDKANVK+GPWSPEED+KLKDYI+KHGTGGNWI+LPQKAGLKRCGKSCRLRWLN
Sbjct: 1  MGRAPCCDKANVKRGPWSPEEDSKLKDYIEKHGTGGNWIALPQKAGLKRCGKSCRLRWLN 60

Query: 61 YLRPDIKHGDFSEEEDTIICNLYTTIGSR 90
          YLRP+IKHG+FS+EED IIC+LY  IGSR
Sbjct: 61 YLRPNIKHGEFSDEEDRIICSLYANIGSR 89

[Close]
BLAST of Csa3G740800 vs. TAIR10
Match: AT5G65790.1 (AT5G65790.1 myb domain protein 68)

HSP 1 Score: 177.2 bits (448), Expect = 5.9e-45
Identity = 78/89 (87.64%), Postives = 81/89 (91.01%), Query Frame = 1 

Query: 1  MGRTPCCDKANVKKGPWSPEEDAKLKDYIQKHGTGGNWISLPQKAGLKRCGKSCRLRWLN 60
          MGR PCCDKANVKKGPWSPEEDAKLKDYI+  GTGGNWI+LPQK GL+RCGKSCRLRWLN
Sbjct: 1  MGRAPCCDKANVKKGPWSPEEDAKLKDYIENSGTGGNWIALPQKIGLRRCGKSCRLRWLN 60

Query: 61 YLRPDIKHGDFSEEEDTIICNLYTTIGSR 90
          YLRP+IKHG FSEEED IICNLY TIGSR
Sbjct: 61 YLRPNIKHGGFSEEEDNIICNLYVTIGSR 89

[Close]
BLAST of Csa3G740800 vs. TAIR10
Match: AT3G49690.1 (AT3G49690.1 myb domain protein 84)

HSP 1 Score: 172.2 bits (435), Expect = 1.9e-43
Identity = 76/89 (85.39%), Postives = 80/89 (89.89%), Query Frame = 1 

Query: 1  MGRTPCCDKANVKKGPWSPEEDAKLKDYIQKHGTGGNWISLPQKAGLKRCGKSCRLRWLN 60
          MGR PCCDKANVKKGPWSPEEDAKLK YI+  GTGGNWI+LPQK GLKRCGKSCRLRWLN
Sbjct: 1  MGRAPCCDKANVKKGPWSPEEDAKLKSYIENSGTGGNWIALPQKIGLKRCGKSCRLRWLN 60

Query: 61 YLRPDIKHGDFSEEEDTIICNLYTTIGSR 90
          YLRP+IKHG FSEEE+ IIC+LY TIGSR
Sbjct: 61 YLRPNIKHGGFSEEEENIICSLYLTIGSR 89

[Close]
BLAST of Csa3G740800 vs. TAIR10
Match: AT5G57620.1 (AT5G57620.1 myb domain protein 36)

HSP 1 Score: 171.0 bits (432), Expect = 4.3e-43
Identity = 76/89 (85.39%), Postives = 80/89 (89.89%), Query Frame = 1 

Query: 1  MGRTPCCDKANVKKGPWSPEEDAKLKDYIQKHGTGGNWISLPQKAGLKRCGKSCRLRWLN 60
          MGR PCCDKANVKKGPWSPEED KLKDYI K+GTGGNWI+LPQK GLKRCGKSCRLRWLN
Sbjct: 1  MGRAPCCDKANVKKGPWSPEEDVKLKDYIDKYGTGGNWIALPQKIGLKRCGKSCRLRWLN 60

Query: 61 YLRPDIKHGDFSEEEDTIICNLYTTIGSR 90
          YLRP+IKHG FSEEED II +LY +IGSR
Sbjct: 61 YLRPNIKHGGFSEEEDRIILSLYISIGSR 89

[Close]
BLAST of Csa3G740800 vs. TAIR10
Match: AT2G36890.1 (AT2G36890.1 Duplicated homeodomain-like superfamily protein)

HSP 1 Score: 169.5 bits (428), Expect = 1.2e-42
Identity = 73/89 (82.02%), Postives = 82/89 (92.13%), Query Frame = 1 

Query: 1  MGRTPCCDKANVKKGPWSPEEDAKLKDYIQKHGTGGNWISLPQKAGLKRCGKSCRLRWLN 60
          MGR PCCDKANVK+GPWSPEEDAKLKDYI+K GTGGNWI+LP KAGL+RCGKSCRLRWLN
Sbjct: 1  MGRAPCCDKANVKRGPWSPEEDAKLKDYIEKQGTGGNWIALPHKAGLRRCGKSCRLRWLN 60

Query: 61 YLRPDIKHGDFSEEEDTIICNLYTTIGSR 90
          YLRP+I+HGDF+EEED II +L+ +IGSR
Sbjct: 61 YLRPNIRHGDFTEEEDNIIYSLFASIGSR 89

[Close]
BLAST of Csa3G740800 vs. TAIR10
Match: AT5G23000.1 (AT5G23000.1 myb domain protein 37)

HSP 1 Score: 162.5 bits (410), Expect = 1.5e-40
Identity = 70/89 (78.65%), Postives = 78/89 (87.64%), Query Frame = 1 

Query: 1  MGRTPCCDKANVKKGPWSPEEDAKLKDYIQKHGTGGNWISLPQKAGLKRCGKSCRLRWLN 60
          MGR PCCDK  VK+GPWSPEED+KL+DYI+K+G GGNWIS P KAGL+RCGKSCRLRWLN
Sbjct: 1  MGRAPCCDKTKVKRGPWSPEEDSKLRDYIEKYGNGGNWISFPLKAGLRRCGKSCRLRWLN 60

Query: 61 YLRPDIKHGDFSEEEDTIICNLYTTIGSR 90
          YLRP+IKHGDFSEEED II +L+  IGSR
Sbjct: 61 YLRPNIKHGDFSEEEDRIIFSLFAAIGSR 89

[Close]
BLAST of Csa3G740800 vs. NCBI nr
Match: gi|700203855|gb|KGN58988.1| (hypothetical protein Csa_3G740800 [Cucumis sativus])

HSP 1 Score: 250.8 bits (639), Expect = 1.2e-63
Identity = 115/115 (100.00%), Postives = 115/115 (100.00%), Query Frame = 1 

Query: 1   MGRTPCCDKANVKKGPWSPEEDAKLKDYIQKHGTGGNWISLPQKAGLKRCGKSCRLRWLN 60
           MGRTPCCDKANVKKGPWSPEEDAKLKDYIQKHGTGGNWISLPQKAGLKRCGKSCRLRWLN
Sbjct: 1   MGRTPCCDKANVKKGPWSPEEDAKLKDYIQKHGTGGNWISLPQKAGLKRCGKSCRLRWLN 60

Query: 61  YLRPDIKHGDFSEEEDTIICNLYTTIGSRTILGEVNIFRVVWNIIMISYNCLRSN 116
           YLRPDIKHGDFSEEEDTIICNLYTTIGSRTILGEVNIFRVVWNIIMISYNCLRSN
Sbjct: 61  YLRPDIKHGDFSEEEDTIICNLYTTIGSRTILGEVNIFRVVWNIIMISYNCLRSN 115

[Close]
BLAST of Csa3G740800 vs. NCBI nr
Match: gi|449440407|ref|XP_004137976.1| (PREDICTED: transcription factor RAX2 [Cucumis sativus])

HSP 1 Score: 198.4 bits (503), Expect = 7.1e-48
Identity = 89/89 (100.00%), Postives = 89/89 (100.00%), Query Frame = 1 

Query: 1  MGRTPCCDKANVKKGPWSPEEDAKLKDYIQKHGTGGNWISLPQKAGLKRCGKSCRLRWLN 60
          MGRTPCCDKANVKKGPWSPEEDAKLKDYIQKHGTGGNWISLPQKAGLKRCGKSCRLRWLN
Sbjct: 1  MGRTPCCDKANVKKGPWSPEEDAKLKDYIQKHGTGGNWISLPQKAGLKRCGKSCRLRWLN 60

Query: 61 YLRPDIKHGDFSEEEDTIICNLYTTIGSR 90
          YLRPDIKHGDFSEEEDTIICNLYTTIGSR
Sbjct: 61 YLRPDIKHGDFSEEEDTIICNLYTTIGSR 89

[Close]
BLAST of Csa3G740800 vs. NCBI nr
Match: gi|659084100|ref|XP_008442708.1| (PREDICTED: transcription factor RAX2 [Cucumis melo])

HSP 1 Score: 198.4 bits (503), Expect = 7.1e-48
Identity = 89/89 (100.00%), Postives = 89/89 (100.00%), Query Frame = 1 

Query: 1  MGRTPCCDKANVKKGPWSPEEDAKLKDYIQKHGTGGNWISLPQKAGLKRCGKSCRLRWLN 60
          MGRTPCCDKANVKKGPWSPEEDAKLKDYIQKHGTGGNWISLPQKAGLKRCGKSCRLRWLN
Sbjct: 1  MGRTPCCDKANVKKGPWSPEEDAKLKDYIQKHGTGGNWISLPQKAGLKRCGKSCRLRWLN 60

Query: 61 YLRPDIKHGDFSEEEDTIICNLYTTIGSR 90
          YLRPDIKHGDFSEEEDTIICNLYTTIGSR
Sbjct: 61 YLRPDIKHGDFSEEEDTIICNLYTTIGSR 89

[Close]
BLAST of Csa3G740800 vs. NCBI nr
Match: gi|729367363|ref|XP_010547571.1| (PREDICTED: transcription factor RAX3-like [Tarenaya hassleriana])

HSP 1 Score: 180.6 bits (457), Expect = 1.5e-42
Identity = 80/89 (89.89%), Postives = 83/89 (93.26%), Query Frame = 1 

Query: 1  MGRTPCCDKANVKKGPWSPEEDAKLKDYIQKHGTGGNWISLPQKAGLKRCGKSCRLRWLN 60
          MGR PCCDKANVKKGPWSPEEDAKLK YI+KHGTGGNWI+LPQK GLKRCGKSCRLRWLN
Sbjct: 1  MGRAPCCDKANVKKGPWSPEEDAKLKAYIEKHGTGGNWIALPQKIGLKRCGKSCRLRWLN 60

Query: 61 YLRPDIKHGDFSEEEDTIICNLYTTIGSR 90
          YLRP+IKHG FSEEED IICNLY TIGSR
Sbjct: 61 YLRPNIKHGGFSEEEDNIICNLYVTIGSR 89

[Close]
BLAST of Csa3G740800 vs. NCBI nr
Match: gi|697183364|ref|XP_009600706.1| (PREDICTED: transcription factor RAX2-like [Nicotiana tomentosiformis])

HSP 1 Score: 180.3 bits (456), Expect = 2.0e-42
Identity = 78/89 (87.64%), Postives = 86/89 (96.63%), Query Frame = 1 

Query: 1  MGRTPCCDKANVKKGPWSPEEDAKLKDYIQKHGTGGNWISLPQKAGLKRCGKSCRLRWLN 60
          MGR PCCDKANVK+GPWSPEEDAKLKD+I K+GTGGNWI+LPQKAGLKRCGKSCRLRWLN
Sbjct: 1  MGRAPCCDKANVKRGPWSPEEDAKLKDFIHKYGTGGNWIALPQKAGLKRCGKSCRLRWLN 60

Query: 61 YLRPDIKHGDFSEEEDTIICNLYTTIGSR 90
          YLRP+IKHGDFSEEED +IC+LY+TIGSR
Sbjct: 61 YLRPNIKHGDFSEEEDRVICSLYSTIGSR 89

The following BLAST results are available for this feature:
BLAST of Csa3G740800 vs. Swiss-Prot
Match NameE-valueIdentityDescription
RAX3_ARATH3.4e-4285.39Transcription factor RAX3 OS=Arabidopsis thaliana GN=RAX3 PE=2 SV=1[more]
MYB36_ARATH7.6e-4285.39Transcription factor MYB36 OS=Arabidopsis thaliana GN=MYB36 PE=1 SV=1[more]
RAX2_ARATH2.2e-4182.02Transcription factor RAX2 OS=Arabidopsis thaliana GN=RAX2 PE=1 SV=1[more]
RAX1_ARATH2.7e-3978.65Transcription factor RAX1 OS=Arabidopsis thaliana GN=RAX1 PE=2 SV=1[more]
MYB80_ARATH3.3e-2962.92Transcription factor MYB80 OS=Arabidopsis thaliana GN=MYB80 PE=1 SV=1[more]
BLAST of Csa3G740800 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LB23_CUCSA8.4e-64100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_3G740800 PE=4 SV=1[more]
A0A067JYX0_JATCU1.8e-4287.64MYB family protein OS=Jatropha curcas GN=JCGZ_16555 PE=4 SV=1[more]
A0A0B2PH60_GLYSO3.1e-4286.52Transcription factor RAX2 OS=Glycine soja GN=glysoja_037621 PE=4 SV=1[more]
A0A078JA03_BRANA3.1e-4288.76BnaC09g50990D protein OS=Brassica napus GN=BnaC09g50990D PE=4 SV=1[more]
A0A0B2QP46_GLYSO3.1e-4286.52Transcription factor RAX3 OS=Glycine soja GN=glysoja_021072 PE=4 SV=1[more]
BLAST of Csa3G740800 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G65790.15.9e-4587.64 myb domain protein 68[more]
AT3G49690.11.9e-4385.39 myb domain protein 84[more]
AT5G57620.14.3e-4385.39 myb domain protein 36[more]
AT2G36890.11.2e-4282.02 Duplicated homeodomain-like superfamily protein[more]
AT5G23000.11.5e-4078.65 myb domain protein 37[more]
BLAST of Csa3G740800 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700203855|gb|KGN58988.1|1.2e-63100.00hypothetical protein Csa_3G740800 [Cucumis sativus][more]
gi|449440407|ref|XP_004137976.1|7.1e-48100.00PREDICTED: transcription factor RAX2 [Cucumis sativus][more]
gi|659084100|ref|XP_008442708.1|7.1e-48100.00PREDICTED: transcription factor RAX2 [Cucumis melo][more]
gi|729367363|ref|XP_010547571.1|1.5e-4289.89PREDICTED: transcription factor RAX3-like [Tarenaya hassleriana][more]
gi|697183364|ref|XP_009600706.1|2.0e-4287.64PREDICTED: transcription factor RAX2-like [Nicotiana tomentosiformis][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001005SANT/Myb
IPR009057Homeobox-like_sf
IPR017877Myb-like_dom
IPR017930Myb_dom
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003677 DNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa3G740800.1Csa3G740800.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001005SANT/Myb domainPFAMPF00249Myb_DNA-bindingcoord: 14..62
score: 6.3
IPR001005SANT/Myb domainSMARTSM00717santcoord: 13..64
score: 1.2
IPR009057Homeodomain-likeGENE3DG3DSA:1.10.10.60coord: 66..89
score: 1.1E-6coord: 5..65
score: 3.5
IPR009057Homeodomain-likeunknownSSF46689Homeodomain-likecoord: 15..89
score: 4.79
IPR017877Myb-like domainPROFILEPS50090MYB_LIKEcoord: 63..115
score: 4
IPR017930Myb domainPROFILEPS51294HTH_MYBcoord: 9..66
score: 2
NoneNo IPR availablePANTHERPTHR10641MYB-LIKE DNA-BINDING PROTEIN MYBcoord: 1..89
score: 6.0
NoneNo IPR availablePANTHERPTHR10641:SF561SUBFAMILY NOT NAMEDcoord: 1..89
score: 6.0

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Csa3G740800Cla008710Watermelon (97103) v1cuwmB267
Csa3G740800MELO3C004947Melon (DHL92) v3.5.1cumeB186
Csa3G740800ClCG02G021460Watermelon (Charleston Gray)cuwcgB212
Csa3G740800Lsi01G013020Bottle gourd (USVL1VR-Ls)culsiB168
Csa3G740800MELO3C004947.2Melon (DHL92) v3.6.1cumedB173
Csa3G740800Bhi03G001196Wax gourdcuwgoB329
Csa3G740800CSPI01G13370Wild cucumber (PI 183967)cpicuB026
Csa3G740800CmoCh01G005450Cucurbita moschata (Rifu)cmocuB451
Csa3G740800Carg12289Silver-seed gourdcarcuB0474
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Csa3G740800Csa1G109320Cucumber (Chinese Long) v2cucuB018
The following block(s) are covering this gene:
GeneOrganismBlock
Csa3G740800Cucumber (Gy14) v1cgycuB166
Csa3G740800Cucumber (Gy14) v1cgycuB539
Csa3G740800Cucumber (Gy14) v1cgycuB436
Csa3G740800Cucurbita maxima (Rimu)cmacuB240
Csa3G740800Cucurbita maxima (Rimu)cmacuB547
Csa3G740800Cucurbita maxima (Rimu)cmacuB660
Csa3G740800Cucurbita maxima (Rimu)cmacuB815
Csa3G740800Cucurbita maxima (Rimu)cmacuB856
Csa3G740800Cucurbita moschata (Rifu)cmocuB227
Csa3G740800Cucurbita moschata (Rifu)cmocuB536
Csa3G740800Cucurbita moschata (Rifu)cmocuB649
Csa3G740800Cucurbita moschata (Rifu)cmocuB807
Csa3G740800Melon (DHL92) v3.5.1cumeB224
Csa3G740800Melon (DHL92) v3.5.1cumeB261
Csa3G740800Watermelon (Charleston Gray)cuwcgB195
Csa3G740800Watermelon (Charleston Gray)cuwcgB220
Csa3G740800Watermelon (Charleston Gray)cuwcgB261
Csa3G740800Watermelon (97103) v1cuwmB199
Csa3G740800Watermelon (97103) v1cuwmB265
Csa3G740800Cucurbita pepo (Zucchini)cpecuB064
Csa3G740800Cucurbita pepo (Zucchini)cpecuB480
Csa3G740800Cucurbita pepo (Zucchini)cpecuB598
Csa3G740800Cucurbita pepo (Zucchini)cpecuB860
Csa3G740800Bottle gourd (USVL1VR-Ls)culsiB161
Csa3G740800Bottle gourd (USVL1VR-Ls)culsiB187
Csa3G740800Cucumber (Gy14) v2cgybcuB111
Csa3G740800Cucumber (Gy14) v2cgybcuB254
Csa3G740800Cucumber (Gy14) v2cgybcuB259
Csa3G740800Melon (DHL92) v3.6.1cumedB166
Csa3G740800Melon (DHL92) v3.6.1cumedB209
Csa3G740800Melon (DHL92) v3.6.1cumedB251
Csa3G740800Silver-seed gourdcarcuB0175
Csa3G740800Silver-seed gourdcarcuB0277
Csa3G740800Watermelon (97103) v2cuwmbB187
Csa3G740800Watermelon (97103) v2cuwmbB195
Csa3G740800Watermelon (97103) v2cuwmbB202
Csa3G740800Watermelon (97103) v2cuwmbB247
Csa3G740800Wax gourdcuwgoB235
Csa3G740800Wax gourdcuwgoB317
Csa3G740800Cucumber (Chinese Long) v2cucuB109
Csa3G740800Cucumber (Chinese Long) v2cucuB115