CSPI03G18020 (gene) Wild cucumber (PI 183967)

Overview
NameCSPI03G18020
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionUnknown protein
LocationChr3 : 13715305 .. 13715556 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGATTTTATAGATGGAGAAGAGCCCGAAATGAGACACGCAATGTGATTAGGAGCGGCGGTAGCGGAAGGCAGACGGTGCGCGTGAAGGCTAGCCAAAATGCACAGAGTAACGGTGGCCCAGATTTGGAGGACTCTGAGACAAAGCCGCTTTATTCTCTCTTCCCGCTGAGAACACAAAGAAGAACCGAACAACAAACAACCATCATCGCCAAATTCCTCACTCCTTTCTTCCAACCAAAACTCCATTAA

mRNA sequence

ATGGGATTTTATAGATGGAGAAGAGCCCGAAATGAGACACGCAATGTGATTAGGAGCGGCGGTAGCGGAAGGCAGACGGTGCGCGTGAAGGCTAGCCAAAATGCACAGAGTAACGGTGGCCCAGATTTGGAGGACTCTGAGACAAAGCCGCTTTATTCTCTCTTCCCGCTGAGAACACAAAGAAGAACCGAACAACAAACAACCATCATCGCCAAATTCCTCACTCCTTTCTTCCAACCAAAACTCCATTAA

Coding sequence (CDS)

ATGGGATTTTATAGATGGAGAAGAGCCCGAAATGAGACACGCAATGTGATTAGGAGCGGCGGTAGCGGAAGGCAGACGGTGCGCGTGAAGGCTAGCCAAAATGCACAGAGTAACGGTGGCCCAGATTTGGAGGACTCTGAGACAAAGCCGCTTTATTCTCTCTTCCCGCTGAGAACACAAAGAAGAACCGAACAACAAACAACCATCATCGCCAAATTCCTCACTCCTTTCTTCCAACCAAAACTCCATTAA
Homology
[Close]
BLAST of CSPI03G18020 vs. TrEMBL
Match: A0A0A0LBT3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G198500 PE=4 SV=1)

HSP 1 Score: 167.2 bits (422), Expect = 8.8e-39
Identity = 83/83 (100.00%), Postives = 83/83 (100.00%), Query Frame = 1 

Query: 1  MGFYRWRRARNETRNVIRSGGSGRQTVRVKASQNAQSNGGPDLEDSETKPLYSLFPLRTQ 60
          MGFYRWRRARNETRNVIRSGGSGRQTVRVKASQNAQSNGGPDLEDSETKPLYSLFPLRTQ
Sbjct: 1  MGFYRWRRARNETRNVIRSGGSGRQTVRVKASQNAQSNGGPDLEDSETKPLYSLFPLRTQ 60

Query: 61 RRTEQQTTIIAKFLTPFFQPKLH 84
          RRTEQQTTIIAKFLTPFFQPKLH
Sbjct: 61 RRTEQQTTIIAKFLTPFFQPKLH 83

[Close]
BLAST of CSPI03G18020 vs. NCBI nr
Match: gi|700202353|gb|KGN57486.1| (hypothetical protein Csa_3G198500 [Cucumis sativus])

HSP 1 Score: 167.2 bits (422), Expect = 1.3e-38
Identity = 83/83 (100.00%), Postives = 83/83 (100.00%), Query Frame = 1 

Query: 1  MGFYRWRRARNETRNVIRSGGSGRQTVRVKASQNAQSNGGPDLEDSETKPLYSLFPLRTQ 60
          MGFYRWRRARNETRNVIRSGGSGRQTVRVKASQNAQSNGGPDLEDSETKPLYSLFPLRTQ
Sbjct: 1  MGFYRWRRARNETRNVIRSGGSGRQTVRVKASQNAQSNGGPDLEDSETKPLYSLFPLRTQ 60

Query: 61 RRTEQQTTIIAKFLTPFFQPKLH 84
          RRTEQQTTIIAKFLTPFFQPKLH
Sbjct: 61 RRTEQQTTIIAKFLTPFFQPKLH 83

The following BLAST results are available for this feature:
BLAST of CSPI03G18020 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CSPI03G18020 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LBT3_CUCSA8.8e-39100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_3G198500 PE=4 SV=1[more]
BLAST of CSPI03G18020 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CSPI03G18020 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700202353|gb|KGN57486.1|1.3e-38100.00hypothetical protein Csa_3G198500 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI03G18020.1CSPI03G18020.1mRNA