CSPI01G14050 (gene) Wild cucumber (PI 183967) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CSPI01G14050
Type	gene
Organism	Cucumis sativus (Wild cucumber (PI 183967))
Description	Unknown protein
Location	Chr1 : 9613595 .. 9614114 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CATTTTTCCATTCTATTCCTATTCTCATCCAAATCTTCCCTTACAATAATCCCCAAAAAAAACCCTATAAATTCCAATTCTCTCTCTTCCTCTCTAAAATTCAAACCTCATCTCTTTTTTCTCTCTCTCAACCCCATGTCTCAATTTCACAAATCCGATCAACAGAAGGTCTTAGAAGCCCCGGAGGCACCGGAACATGGTGATCGAAGTACGGAGGAAGGTAGCGGAGAAGCACTTAAAGCAGCTGAGCATGATGACGGAGAGAGCTGTCGAACACCGACGTCACCCCAGCATCGAATTCCGATCGCACAAAGCTGCCCGACGACACCAAGAAAACAGAGAGTTGTGAGGAAGAGGAAATTTTCTGACCAAAGCTTCTTTGAAGCCACCGGAAGAGGAGAGGTAGAATCCTTGTTTGGCTTATTTTATAGGGTTTCTTCTTCTAAAAGAAGGTGTACAAGTGTATAAAACCCTAGAGTGTTTGTATATTTATATATATATATATATAGATATATACACG

mRNA sequence

ATGTCTCAATTTCACAAATCCGATCAACAGAAGGTCTTAGAAGCCCCGGAGGCACCGGAACATGGTGATCGAAGTACGGAGGAAGGTAGCGGAGAAGCACTTAAAGCAGCTGAGCATGATGACGGAGAGAGCTGTCGAACACCGACGTCACCCCAGCATCGAATTCCGATCGCACAAAGCTGCCCGACGACACCAAGAAAACAGAGAGTTGTGAGGAAGAGGAAATTTTCTGACCAAAGCTTCTTTGAAGCCACCGGAAGAGGAGAGGTAGAATCCTTGTTTGGCTTATTTTATAGGGTTTCTTCTTCTAAAAGAAGGTGTACAAGTGTATAA

Coding sequence (CDS)

ATGTCTCAATTTCACAAATCCGATCAACAGAAGGTCTTAGAAGCCCCGGAGGCACCGGAACATGGTGATCGAAGTACGGAGGAAGGTAGCGGAGAAGCACTTAAAGCAGCTGAGCATGATGACGGAGAGAGCTGTCGAACACCGACGTCACCCCAGCATCGAATTCCGATCGCACAAAGCTGCCCGACGACACCAAGAAAACAGAGAGTTGTGAGGAAGAGGAAATTTTCTGACCAAAGCTTCTTTGAAGCCACCGGAAGAGGAGAGGTAGAATCCTTGTTTGGCTTATTTTATAGGGTTTCTTCTTCTAAAAGAAGGTGTACAAGTGTATAA

Homology

[Close]

BLAST of CSPI01G14050 vs. TrEMBL
Match: A0A0A0LV74_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G135270 PE=4 SV=1)

HSP 1 Score: 176.0 bits (445), Expect = 2.5e-41
Identity = 88/89 (98.88%), Postives = 88/89 (98.88%), Query Frame = 1


Query: 1  MSQFHKSDQQKVLEAPEAPEHGDRSTEEGSGEALKAAEHDDGESCRTPTSPQHRIPIAQS 60
          MSQFHKSDQQKVLEAPEAPEHGDRSTEEG GEALKAAEHDDGESCRTPTSPQHRIPIAQS
Sbjct: 1  MSQFHKSDQQKVLEAPEAPEHGDRSTEEGRGEALKAAEHDDGESCRTPTSPQHRIPIAQS 60

Query: 61 CPTTPRKQRVVRKRKFSDQSFFEATGRGE 90
          CPTTPRKQRVVRKRKFSDQSFFEATGRGE
Sbjct: 61 CPTTPRKQRVVRKRKFSDQSFFEATGRGE 89

[Close]

BLAST of CSPI01G14050 vs. TrEMBL
Match: V4RSW1_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10029845mg PE=4 SV=1)

HSP 1 Score: 75.9 bits (185), Expect = 3.5e-11
Identity = 50/106 (47.17%), Postives = 62/106 (58.49%), Query Frame = 1


Query: 13  LEAPEAPEHGDRSTEEGSGEALKAAEHD-DGESCRTPTSPQHRIPIAQSCPTTPRKQRVV 72
           +  P+        TEE +GE ++AA  D   E C+TPTS  H+IP  QSCPTTPRK+  V
Sbjct: 16  INLPKLKPSSKIQTEEEAGEEIQAASEDYTNEDCKTPTSSDHKIPKIQSCPTTPRKKVQV 75

Query: 73  --RKRKFSDQSFFEATGRGEVESLF---GLFYRVSSS--KRRCTSV 111
              KRK  +  FFEATGR EVES F      +RV S   K+RC S+
Sbjct: 76  SFHKRKMHEFLFFEATGREEVESFFRSNSELFRVGSHAVKKRCKSL 121

[Close]

BLAST of CSPI01G14050 vs. TrEMBL
Match: W9S3U9_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_011762 PE=4 SV=1)

HSP 1 Score: 74.7 bits (182), Expect = 7.9e-11
Identity = 44/83 (53.01%), Postives = 53/83 (63.86%), Query Frame = 1


Query: 32  EALKAAEHDDGESCRTPTSPQHRIPIAQSCPTTPRK---QRV-VRKRKFSDQSFFEATGR 91
           E  K   +DD   C+TPTS   +IP  QSCP TPRK    RV +RKRKFS+  FFE+TGR
Sbjct: 53  EEQKLEYYDD---CKTPTSEDQKIPTTQSCPPTPRKPASDRVFLRKRKFSEFHFFESTGR 112

Query: 92  GEVESLFGLFYRVSSSKRRCTSV 111
            EVES F   ++ S  K+RC SV
Sbjct: 113 EEVESFFRSTFKFSGLKKRCKSV 132

[Close]

BLAST of CSPI01G14050 vs. TrEMBL
Match: M5W3L3_PRUPE (Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa019744mg PE=4 SV=1)

HSP 1 Score: 73.2 bits (178), Expect = 2.3e-10
Identity = 49/111 (44.14%), Postives = 63/111 (56.76%), Query Frame = 1


Query: 7   SDQQKVLEA---PEAPEHGDRSTEEGSGEALKAAEHDDGESCRTPTSPQHRIPIAQSCPT 66
           SDQ +VL      + P  G +  ++ S   ++     +G+ CRTPTS  H+IP  QSCPT
Sbjct: 4   SDQHQVLSIFHDHQQPPQGLKEKDDNSEPIIR----KEGDDCRTPTSRDHKIPTIQSCPT 63

Query: 67  TPRK--QRVVRKRKFSDQSFFEATGRGEVESLFGLFYRVSSS--KRRCTSV 111
           TPRK  Q  V KRK +   FFE TGR EVES F   +   S   K+RCTS+
Sbjct: 64  TPRKKGQAFVCKRKLAVFDFFERTGREEVESFFRSCFESPSPRVKKRCTSI 110

[Close]

BLAST of CSPI01G14050 vs. TrEMBL
Match: A0A067F2H9_CITSI (Uncharacterized protein (Fragment) OS=Citrus sinensis GN=CISIN_1g0381851mg PE=4 SV=1)

HSP 1 Score: 71.2 bits (173), Expect = 8.7e-10
Identity = 43/85 (50.59%), Postives = 52/85 (61.18%), Query Frame = 1


Query: 13  LEAPEAPEHGDRSTEEGSGEALKAAEHD-DGESCRTPTSPQHRIPIAQSCPTTPRKQRVV 72
           +  P+        TEE +GE ++AA  D   E C+TPTS  H+IP  QSCPTTPRK+  V
Sbjct: 25  INLPKLKPSSKIQTEEEAGEEIQAASEDYTNEDCKTPTSSDHKIPKIQSCPTTPRKKVQV 84

Query: 73  --RKRKFSDQSFFEATGRGEVESLF 95
              KRK  +  FFEATGR EVES F
Sbjct: 85  SFHKRKMHEFLFFEATGREEVESFF 109

[Close]

BLAST of CSPI01G14050 vs. NCBI nr
Match: gi|700209773|gb|KGN64869.1| (hypothetical protein Csa_1G135270 [Cucumis sativus])

HSP 1 Score: 176.0 bits (445), Expect = 3.6e-41
Identity = 88/89 (98.88%), Postives = 88/89 (98.88%), Query Frame = 1


Query: 1  MSQFHKSDQQKVLEAPEAPEHGDRSTEEGSGEALKAAEHDDGESCRTPTSPQHRIPIAQS 60
          MSQFHKSDQQKVLEAPEAPEHGDRSTEEG GEALKAAEHDDGESCRTPTSPQHRIPIAQS
Sbjct: 1  MSQFHKSDQQKVLEAPEAPEHGDRSTEEGRGEALKAAEHDDGESCRTPTSPQHRIPIAQS 60

Query: 61 CPTTPRKQRVVRKRKFSDQSFFEATGRGE 90
          CPTTPRKQRVVRKRKFSDQSFFEATGRGE
Sbjct: 61 CPTTPRKQRVVRKRKFSDQSFFEATGRGE 89

[Close]

BLAST of CSPI01G14050 vs. NCBI nr
Match: gi|985462831|ref|XP_015388774.1| (PREDICTED: cyclin-dependent protein kinase inhibitor SMR2 [Citrus sinensis])

HSP 1 Score: 76.6 bits (187), Expect = 3.0e-11
Identity = 50/106 (47.17%), Postives = 62/106 (58.49%), Query Frame = 1


Query: 13  LEAPEAPEHGDRSTEEGSGEALKAAEHD-DGESCRTPTSPQHRIPIAQSCPTTPRKQRVV 72
           +  P+        TEE +GE ++AA  D   E C+TPTS  H+IP  QSCPTTPRK+  V
Sbjct: 10  INLPKLKPSSKIQTEEEAGEEIQAASEDYTNEDCKTPTSSDHKIPKIQSCPTTPRKKGQV 69

Query: 73  --RKRKFSDQSFFEATGRGEVESLF---GLFYRVSSS--KRRCTSV 111
              KRK  +  FFEATGR EVES F      +RV S   K+RC S+
Sbjct: 70  SFHKRKMHEVLFFEATGREEVESFFRSHSELFRVDSHAVKKRCKSL 115

[Close]

BLAST of CSPI01G14050 vs. NCBI nr
Match: gi|567863538|ref|XP_006424423.1| (hypothetical protein CICLE_v10029845mg [Citrus clementina])

HSP 1 Score: 75.9 bits (185), Expect = 5.1e-11
Identity = 50/106 (47.17%), Postives = 62/106 (58.49%), Query Frame = 1


Query: 13  LEAPEAPEHGDRSTEEGSGEALKAAEHD-DGESCRTPTSPQHRIPIAQSCPTTPRKQRVV 72
           +  P+        TEE +GE ++AA  D   E C+TPTS  H+IP  QSCPTTPRK+  V
Sbjct: 16  INLPKLKPSSKIQTEEEAGEEIQAASEDYTNEDCKTPTSSDHKIPKIQSCPTTPRKKVQV 75

Query: 73  --RKRKFSDQSFFEATGRGEVESLF---GLFYRVSSS--KRRCTSV 111
              KRK  +  FFEATGR EVES F      +RV S   K+RC S+
Sbjct: 76  SFHKRKMHEFLFFEATGREEVESFFRSNSELFRVGSHAVKKRCKSL 121

[Close]

BLAST of CSPI01G14050 vs. NCBI nr
Match: gi|703150667|ref|XP_010109920.1| (hypothetical protein L484_011762 [Morus notabilis])

HSP 1 Score: 74.7 bits (182), Expect = 1.1e-10
Identity = 44/83 (53.01%), Postives = 53/83 (63.86%), Query Frame = 1


Query: 32  EALKAAEHDDGESCRTPTSPQHRIPIAQSCPTTPRK---QRV-VRKRKFSDQSFFEATGR 91
           E  K   +DD   C+TPTS   +IP  QSCP TPRK    RV +RKRKFS+  FFE+TGR
Sbjct: 53  EEQKLEYYDD---CKTPTSEDQKIPTTQSCPPTPRKPASDRVFLRKRKFSEFHFFESTGR 112

Query: 92  GEVESLFGLFYRVSSSKRRCTSV 111
            EVES F   ++ S  K+RC SV
Sbjct: 113 EEVESFFRSTFKFSGLKKRCKSV 132

[Close]

BLAST of CSPI01G14050 vs. NCBI nr
Match: gi|595835729|ref|XP_007207110.1| (hypothetical protein PRUPE_ppa019744mg, partial [Prunus persica])

HSP 1 Score: 73.2 bits (178), Expect = 3.3e-10
Identity = 49/111 (44.14%), Postives = 63/111 (56.76%), Query Frame = 1


Query: 7   SDQQKVLEA---PEAPEHGDRSTEEGSGEALKAAEHDDGESCRTPTSPQHRIPIAQSCPT 66
           SDQ +VL      + P  G +  ++ S   ++     +G+ CRTPTS  H+IP  QSCPT
Sbjct: 4   SDQHQVLSIFHDHQQPPQGLKEKDDNSEPIIR----KEGDDCRTPTSRDHKIPTIQSCPT 63

Query: 67  TPRK--QRVVRKRKFSDQSFFEATGRGEVESLFGLFYRVSSS--KRRCTSV 111
           TPRK  Q  V KRK +   FFE TGR EVES F   +   S   K+RCTS+
Sbjct: 64  TPRKKGQAFVCKRKLAVFDFFERTGREEVESFFRSCFESPSPRVKKRCTSI 110

The following BLAST results are available for this feature:

BLAST of CSPI01G14050 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CSPI01G14050 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LV74_CUCSA	2.5e-41	98.88	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G135270 PE=4 SV=1	[more]
V4RSW1_9ROSI	3.5e-11	47.17	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10029845mg PE=4 SV=1	[more]
W9S3U9_9ROSA	7.9e-11	53.01	Uncharacterized protein OS=Morus notabilis GN=L484_011762 PE=4 SV=1	[more]
M5W3L3_PRUPE	2.3e-10	44.14	Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa019744mg PE=4 S...	[more]
A0A067F2H9_CITSI	8.7e-10	50.59	Uncharacterized protein (Fragment) OS=Citrus sinensis GN=CISIN_1g0381851mg PE=4 ...	[more]

BLAST of CSPI01G14050 vs. TAIR10


Match Name	E-value	Identity	Description

BLAST of CSPI01G14050 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|700209773\|gb\|KGN64869.1\|	3.6e-41	98.88	hypothetical protein Csa_1G135270 [Cucumis sativus]	[more]
gi\|985462831\|ref\|XP_015388774.1\|	3.0e-11	47.17	PREDICTED: cyclin-dependent protein kinase inhibitor SMR2 [Citrus sinensis]	[more]
gi\|567863538\|ref\|XP_006424423.1\|	5.1e-11	47.17	hypothetical protein CICLE_v10029845mg [Citrus clementina]	[more]
gi\|703150667\|ref\|XP_010109920.1\|	1.1e-10	53.01	hypothetical protein L484_011762 [Morus notabilis]	[more]
gi\|595835729\|ref\|XP_007207110.1\|	3.3e-10	44.14	hypothetical protein PRUPE_ppa019744mg, partial [Prunus persica]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI01G14050.1	CSPI01G14050.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33142	FAMILY NOT NAMED	coord: 38..94 score: 2.3
None	No IPR available	PANTHER	PTHR33142:SF1	CYCLIN-DEPENDENT PROTEIN KINASE INHIBITOR SIM-RELATED	coord: 38..94 score: 2.3

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CSPI01G14050	Cla001050	Watermelon (97103) v1	cpiwmB049
CSPI01G14050	Csa1G135270	Cucumber (Chinese Long) v2	cpicuB000
CSPI01G14050	ClCG01G013950	Watermelon (Charleston Gray)	cpiwcgB017
CSPI01G14050	Lsi03G000650	Bottle gourd (USVL1VR-Ls)	cpilsiB046
CSPI01G14050	MELO3C035553.2	Melon (DHL92) v3.6.1	cpimedB011
CSPI01G14050	CsaV3_1G014250	Cucumber (Chinese Long) v3	cpicucB001
CSPI01G14050	Cla97C01G012920	Watermelon (97103) v2	cpiwmbB002
CSPI01G14050	Bhi08G000110	Wax gourd	cpiwgoB049
CSPI01G14050	CmaCh12G008100	Cucurbita maxima (Rimu)	cmacpiB163
CSPI01G14050	CmaCh13G002660	Cucurbita maxima (Rimu)	cmacpiB205
CSPI01G14050	CmoCh13G002730	Cucurbita moschata (Rifu)	cmocpiB192
CSPI01G14050	Cp4.1LG07g06750	Cucurbita pepo (Zucchini)	cpecpiB805
CSPI01G14050	Cp4.1LG20g07400	Cucurbita pepo (Zucchini)	cpecpiB518
CSPI01G14050	CsGy1G014040	Cucumber (Gy14) v2	cgybcpiB001
CSPI01G14050	Carg23699	Silver-seed gourd	carcpiB0192

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CSPI01G14050	Watermelon (97103) v2	cpiwmbB026
CSPI01G14050	Cucumber (Gy14) v1	cgycpiB318
CSPI01G14050	Cucurbita moschata (Rifu)	cmocpiB148
CSPI01G14050	Melon (DHL92) v3.5.1	cpimeB011
CSPI01G14050	Watermelon (97103) v1	cpiwmB070
CSPI01G14050	Bottle gourd (USVL1VR-Ls)	cpilsiB006