Bhi06G000179 (gene) Wax gourd (B227) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AAATAAAGGGAAAAAGAAAAAAAAAACAAAAGAACTAGAGGTTCATTGGCTGACTGAATTTGCTCTTTCTCCTCCCCCTTTCTGCTTGCTTTCTGAAACTTCAGTTTAGGGTTTTGCTTTTGGAGTTGCAGAACAATCATGTCAGGAAGATCAAATGGCTGCACCGTTTACGTAGGTATGTTCATTGATTTGTCTACCCTAATTCGTTTTGAACTTTTTCGTTTTCCTCTCATGAGATTTCTGCTGTTTGCGTTTTAAGCTTCGTGTTTTTACTTCCGTGAAGTTCCGTTTGAAAATTATGCTTTCGGGTGGTCAATTTTGTAAGGAGTATGCTTATTTTCTTCTATCATGTTCTACGATTTGATTTATAGGACACAAAACATATTTCTTGATTGGAAAAGCTCTGCTTAGACATTTGGCGGGTTCATAATTGAACAAAAAGGATTGCATTGTTTGCTGGATTTCTTCCTTCCCAACTTTTTTTTTCCTCTCTTGTAAATTCGTTTTACTTCTGTTCATAACATGCGTGATTTCTTTGCTTTTAGGCGAAGAGGGTTGGAAGTTAAACTTACTTCGTTTTTGTTTTTCTTAGATCTCTTAGATTATCTTCGTTTTTGCTTAACTGGTTCAATCTTAATTTTCACTTACCCCATCATCTTTTATCTGCTTCTGTGTAGGCTTCCTCCATTTGAGTATTGATGCCAGTTTGTTCTTTAATATTTATTTAACATAACTAGATGTGCAACGAACTTATTCTTTCGGGGAACTTTTCGTTCCCTTTAATATTTTGATACAACGTTCGTTATGTATTAAAGTTTTTAGGATGCAACCTATCATTTTGAGTTTAAGATGCCACATTTTCTTATGAGTCTGATTTTGTTACTTTTTTTTCACTTTCTATAGGTAATTTGGATGAAAGGATAAGTGATAGGGTTCTTTATGATATTCTAATCCAAGCTGGGCGAGTAGTGGACTTGCACATTCCTCGGGACAAGGAATCTGGTAAACCCAAAGGTTTTGCTTTTGTAGTGTATGAAAGTGAGGAGATTACCAACTATGCTGTTAAGCTTTTCTCTGGTCTCGTGACTCTTTATAACCGTACCCTGAAGTTTGCAGTATGTAATTATTGTTTCTTTCTCATTGCAAATTCTTCATGGTTCCCTTTGTTTCTTTTATCTTGGTTTTTCTTGATCAACTTTGTTTCCAAACTTATACATATTGTTTTTATATTTATTTATTCATGTCATATACCATCTCTTCTTATTTGACGGATTTTGATGAATACCTCACTTTTAGATATATATTATTAGTCTTTTAAGATGCACGTTGGATTTGAAATTTTAGTTTTCTTGACTTCATAACAATAAAATTTGATGGACTTAATTTTAGTATATTGCGTAACTTTTTTGAGGTTTTAGAAATTACATTCCAATCATATGGTTTTGTTCTTGTTATTTACCTAACTTGCGTTTAGATGCAAACCTTGTAATCATAATTAATTGACGGGAAGAATCAAGATATTCCTGGATCATGATGAATTTAATCTAGGTTAGTTCATGTCACCAGAAGTTTAAATGACTTGGTTGGAAAACCTTTGGCTTCTGCATTAGTACATTATTGATAAACAAAAGAAAAAAGGGAAGATAGAAATTATCACATCACTATGATTACTAATGACTTTGTTGAAAAACAGGTGAACTTATTGAAGTTTGGAGAACGAAGATAGATGCTAAAACATTATTAGAAAAACAAAACAAGTTTCAATCTATAATTTTATATATTTAAAATGATATCTATTTAGTTTCCTAGAAAAATATCTTTTAATATGATTTTGGACGAAATAGGACAACATAAAAATGAAGTGCTAGATAGAAATGTAAAGATTCTTTTCCTGAATATATATTTATTATAGATTATTTCTTTTAATGTATGATTATTTACTATGTGGTTTCATACTTCAATTTTATTAATTAGATGATTGTGCAATCTTCCATTGTCAGATTTCATTATGTAGCGAGTCATTAAATTATGGGAATGATTCATAGGTTTCGACTTTGTGCAAGCAGGTATCTGGGCAAGACAAGTCTTCACCTAGTAGTAGTGCAATCACTTCATCATCAAATGTATCTCATAAATCGAGGTCACATATTGTTCTAGGTTACTCTGAAATATCTCAGTATTCCAGTCACTTGTCAACATCGTGCAGGTTCTCAACGTACCCTGAAGACCATGTAGAAGGTGATTTTACCTTTCTTTATATTTGTCTTTGCATTGTTAGTTTCACTAAGAATTGTGTATTTTTATTTTCTTGACCTTTCCCACACTAGTTCAACAAAAATTTATTTCTTTTATTCAGCGCTTCTTTACCCTGGTTTAGTTAACCAATATAATGGGTATGGATCACATTTGGATAACTACAATAAAGAATACAGTCAGAGATATTCTGGAACAACTTTGGATAGCTTTAACCAACCTAAATCACGCCGCCATGTTACAAGTTATCCAGTATACTATCATTCTTATGATCTTTTGAAGTAATGCAGCTAGTGCCTTCCATTTTTGGTAATCATAATGGTAATTTAAATCTTAGATAAAGTAGTATTGCTTAGTTGGATTAGGATGCAAATGGGTTAGTGGTGAATGATATGATATTTGCTATGGAACATGCTAGTTTATGTTATTGAATACAGTCATTTTGTTAGGTGCACATGTTCATATGATTTTGGATGTGTCATCATAGTTGATACACTAATTAAAGTATTGTAACCTATTTTATTACGTTGTCAGTTTTTGTTATTGTATATTGAGTATTTAGTTATTTATGAAGTGTTTTACTTGAGCAAATAATATTTAATTATCTGTTTCTCTTCAAGAATAATTTTGAAAACAGAAGAAAAATTATTATCAAGGATTACTTTTTGTTTATCTTGTTCCTGTGCTTTTATTGTTTTGAGGCTTCTAATTCTTGGCTTCATCTGAAATAAATGTATTGCATGGCGTGCTTGAATTTTCAAGACGCAATTTCTTTGAAAAGAATTAATGACTAAAAGTTTACTTTGAGAAAGACAGTATTTACTAGTCCTGAGAGCCATTCATTTTTTTGTGAGATCGTAGATAAAACATTTGGTGATCAGGCTAGTGGCAGTTCTATCAGAGGATCATTATAATGATTTCTATCAAAATTCAAGAATCTAAATCCCTCCTTTATCTTATTTGGGCTCGAAGTTCCTATCTGAAGTTGTCCATTAGTTTTACTATTCTTTGTATCATAATATGAATTTGTTCATTTCCTTTTATTTCTACCCTGTTTATTGGTTGTGAAACCTGTATTTGATGTAATATGTATACATTTGTTTGTATGTGTATAATAAATGATCTTTCTTTGGCTGCCTTATAAAATTTGGTACAACTTTGATATAGGCGTATAGCTTTAGTTGGCAAGTAGTGTTTTTAAGTGAAATCCTTTAGTATGAAGCACTAGTGGAGAAAAAAAACATTCAAGTGCTTTGTCCTAAAGGTACGTCAAAGAGTTTACATTTTCTTTTTCAAACAAGAAGTGAAAATAGAATTAAAAGCATCAATACCCTAATGGATAGGACAAAGTTCCTCTTAACCTATTGTTAGGTGATATAATATTAAATTTATTTTCACTCATTGAGTTTAAGCTTTTGGGTCCATCGGTAGTTTAACATGGTGGTAGTCTAGGAGGTTTTGTATTTAAACCCGGTTTTGTATTTAAACCCCTGCAATGTTATTTCTTCTTCAATTAATATTGATTTCCACTTGTTATGTCTTCTACATATTTCAAGCCCACAAGTGAGGGGAGTGTTAGATGATATAATATTAAATTTATTTTCACCCATTAGCTCAAGTTTTTGGGATAATTGGTGATTTAAGGACTTATGAATTATGATAGTGTTAAACTTTTGAGTCAATCGGTGATTTAAGACTTATAATGGTGGTGTAGAATACATATGAGTTTGTTTCTGTATGACATTTATATGTTTATAGTTTTGAATATGTATGTGATGATATTGTCAATTAAAGATACTTGGAAAGATGTGAACAAGTGTGGGAGGCAGAGGCTGGCTGTAATCTGATGAAAATATGGAGCTTTGAAATGAATGATGAGAGAACAGAGAATGTGATAGATGGTTGGAGGCAGAGGTTGAAGCATATAGGGAATTTGATTGATTTTTTGGTGGGCTCTAGTGTTATGTTGTTTTGTACTTGATTTTGTGCCACCACTATGAATTTGAATTGTATTGAAGTAGAGTTGCCTATCAGTGTAATTAGAGTAGCATAGTTCCTCAGGTGTAGGTGTATAGAGAATTCGTGGTTCTTGTCTAAAGAGAAGCATATTATTGTAATCTCGGTTAGCAATCAAAACTTCAACTGGTAGCAACCCGCTGGTTGCGCTGATTGTTGGATTATAAAGGAAATCTCGATCTCATATTGGTCATTGGTACGGGTTCAGGAATCTCAATCTCTTTCTTTCTCCTTTTGTTTTTGTGAAGAATATGATGAAATGTAAAGCCGAGCATGTGGGTGATTTTGTATCAG AAATAAAGGGAAAAAGAAAAAAAAAACAAAAGAACTAGAGGTTCATTGGCTGACTGAATTTGCTCTTTCTCCTCCCCCTTTCTGCTTGCTTTCTGAAACTTCAGTTTAGGGTTTTGCTTTTGGAGTTGCAGAACAATCATGTCAGGAAGATCAAATGGCTGCACCGTTTACGTAGGTAATTTGGATGAAAGGATAAGTGATAGGGTTCTTTATGATATTCTAATCCAAGCTGGGCGAGTAGTGGACTTGCACATTCCTCGGGACAAGGAATCTGGTAAACCCAAAGGTTTTGCTTTTGTAGTGTATGAAAGTGAGGAGATTACCAACTATGCTGTTAAGCTTTTCTCTGGTCTCGTGACTCTTTATAACCGTACCCTGAAGTTTGCAGTATCTGGGCAAGACAAGTCTTCACCTAGTAGTAGTGCAATCACTTCATCATCAAATGTATCTCATAAATCGAGGTCACATATTGTTCTAGGTTACTCTGAAATATCTCAGTATTCCAGTCACTTGTCAACATCGTGCAGGTTCTCAACGTACCCTGAAGACCATGTAGAAGATAAAACATTTGGTGATCAGGCTAGTGGCAGTTCTATCAGAGGATCATTATAATGATTTCTATCAAAATTCAAGAATCTAAATCCCTCCTTTATCTTATTTGGGCTCGAAGTTCCTATCTGAAGTTGTCCATTAGTTTTACTATTCTTTGTATCATAATATGAATTTGTTCATTTCCTTTTATTTCTACCCTGTTTATTGGTTGTGAAACCTGTATTTGATGTAATATGTATACATTTGTTTGTATGTGTATAATAAATGATCTTTCTTTGGCTGCCTTATAAAATTTGGTACAACTTTGATATAGGCGTATAGCTTTAGTTGGCAAGTAGTGTTTTTAAGTGAAATCCTTTAGTATGAAGCACTAGTGGAGAAAAAAAACATTCAAGTGCTTTGTCCTAAAGGTACGTCAAAGAGTTTACATTTTCTTTTTCAAACAAGAAGTGAAAATAGAATTAAAAGCATCAATACCCTAATGGATAGGACAAAGTTCCTCTTAACCTATTGTTAGGTGATATAATATTAAATTTATTTTCACTCATTGAGTTTAAGCTTTTGGGTCCATCGGTAGTTTAACATGGTGGTAGTCTAGGAGGTTTTGTATTTAAACCCGGTTTTGTATTTAAACCCCTGCAATGTTATTTCTTCTTCAATTAATATTGATTTCCACTTGTTATGTCTTCTACATATTTCAAGCCCACAAGTGAGGGGAGTGTTAGATGATATAATATTAAATTTATTTTCACCCATTAGCTCAAGTTTTTGGGATAATTGGTGATTTAAGGACTTATGAATTATGATAGTGTTAAACTTTTGAGTCAATCGGTGATTTAAGACTTATAATGGTGGTGTAGAATACATATGAGTTTGTTTCTGTATGACATTTATATGTTTATAGTTTTGAATATGTATGTGATGATATTGTCAATTAAAGATACTTGGAAAGATGTGAACAAGTGTGGGAGGCAGAGGCTGGCTGTAATCTGATGAAAATATGGAGCTTTGAAATGAATGATGAGAGAACAGAGAATGTGATAGATGGTTGGAGGCAGAGGTTGAAGCATATAGGGAATTTGATTGATTTTTTGGTGGGCTCTAGTGTTATGTTGTTTTGTACTTGATTTTGTGCCACCACTATGAATTTGAATTGTATTGAAGTAGAGTTGCCTATCAGTGTAATTAGAGTAGCATAGTTCCTCAGGTGTAGGTGTATAGAGAATTCGTGGTTCTTGTCTAAAGAGAAGCATATTATTGTAATCTCGGTTAGCAATCAAAACTTCAACTGGTAGCAACCCGCTGGTTGCGCTGATTGTTGGATTATAAAGGAAATCTCGATCTCATATTGGTCATTGGTACGGGTTCAGGAATCTCAATCTCTTTCTTTCTCCTTTTGTTTTTGTGAAGAATATGATGAAATGTAAAGCCGAGCATGTGGGTGATTTTGTATCAG ATGTCAGGAAGATCAAATGGCTGCACCGTTTACGTAGGTAATTTGGATGAAAGGATAAGTGATAGGGTTCTTTATGATATTCTAATCCAAGCTGGGCGAGTAGTGGACTTGCACATTCCTCGGGACAAGGAATCTGGTAAACCCAAAGGTTTTGCTTTTGTAGTGTATGAAAGTGAGGAGATTACCAACTATGCTGTTAAGCTTTTCTCTGGTCTCGTGACTCTTTATAACCGTACCCTGAAGTTTGCAGTATCTGGGCAAGACAAGTCTTCACCTAGTAGTAGTGCAATCACTTCATCATCAAATGTATCTCATAAATCGAGGTCACATATTGTTCTAGGTTACTCTGAAATATCTCAGTATTCCAGTCACTTGTCAACATCGTGCAGGTTCTCAACGTACCCTGAAGACCATGTAGAAGATAAAACATTTGGTGATCAGGCTAGTGGCAGTTCTATCAGAGGATCATTATAA MSGRSNGCTVYVGNLDERISDRVLYDILIQAGRVVDLHIPRDKESGKPKGFAFVVYESEEITNYAVKLFSGLVTLYNRTLKFAVSGQDKSSPSSSAITSSSNVSHKSRSHIVLGYSEISQYSSHLSTSCRFSTYPEDHVEDKTFGDQASGSSIRGSL Homology
BLAST of Bhi06G000179 vs. TAIR 10
Match: AT4G10110.1 (RNA-binding (RRM/RBD/RNP motifs) family protein ) HSP 1 Score: 153.7 bits (387), Expect = 1.2e-37 Identity = 87/163 (53.37%), Postives = 114/163 (69.94%), Query Frame = 0
BLAST of Bhi06G000179 vs. TAIR 10
Match: AT2G18510.1 (RNA-binding (RRM/RBD/RNP motifs) family protein ) HSP 1 Score: 71.2 bits (173), Expect = 8.1e-13 Identity = 30/88 (34.09%), Postives = 60/88 (68.18%), Query Frame = 0
BLAST of Bhi06G000179 vs. TAIR 10
Match: AT2G37220.1 (RNA-binding (RRM/RBD/RNP motifs) family protein ) HSP 1 Score: 59.3 bits (142), Expect = 3.2e-09 Identity = 27/70 (38.57%), Postives = 40/70 (57.14%), Query Frame = 0
BLAST of Bhi06G000179 vs. TAIR 10
Match: AT3G47120.1 (RNA recognition motif (RRM)-containing protein ) HSP 1 Score: 54.7 bits (130), Expect = 7.9e-08 Identity = 34/97 (35.05%), Postives = 49/97 (50.52%), Query Frame = 0
BLAST of Bhi06G000179 vs. TAIR 10
Match: AT5G64200.1 (ortholog of human splicing factor SC35 ) HSP 1 Score: 49.3 bits (116), Expect = 3.3e-06 Identity = 34/106 (32.08%), Postives = 57/106 (53.77%), Query Frame = 0
BLAST of Bhi06G000179 vs. ExPASy Swiss-Prot
Match: Q15427 (Splicing factor 3B subunit 4 OS=Homo sapiens OX=9606 GN=SF3B4 PE=1 SV=1) HSP 1 Score: 75.9 bits (185), Expect = 4.6e-13 Identity = 32/81 (39.51%), Postives = 60/81 (74.07%), Query Frame = 0
BLAST of Bhi06G000179 vs. ExPASy Swiss-Prot
Match: Q8QZY9 (Splicing factor 3B subunit 4 OS=Mus musculus OX=10090 GN=Sf3b4 PE=1 SV=1) HSP 1 Score: 75.9 bits (185), Expect = 4.6e-13 Identity = 32/81 (39.51%), Postives = 60/81 (74.07%), Query Frame = 0
BLAST of Bhi06G000179 vs. ExPASy Swiss-Prot
Match: Q6AYL5 (Splicing factor 3B subunit 4 OS=Rattus norvegicus OX=10116 GN=Sf3b4 PE=2 SV=1) HSP 1 Score: 75.9 bits (185), Expect = 4.6e-13 Identity = 32/81 (39.51%), Postives = 60/81 (74.07%), Query Frame = 0
BLAST of Bhi06G000179 vs. ExPASy Swiss-Prot
Match: Q09442 (Splicing factor 3B subunit 4 OS=Caenorhabditis elegans OX=6239 GN=sap-49 PE=1 SV=2) HSP 1 Score: 72.8 bits (177), Expect = 3.9e-12 Identity = 29/78 (37.18%), Postives = 56/78 (71.79%), Query Frame = 0
BLAST of Bhi06G000179 vs. ExPASy Swiss-Prot
Match: O14102 (Spliceosome-associated protein 49 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=sap49 PE=3 SV=2) HSP 1 Score: 69.3 bits (168), Expect = 4.3e-11 Identity = 30/86 (34.88%), Postives = 55/86 (63.95%), Query Frame = 0
BLAST of Bhi06G000179 vs. ExPASy TrEMBL
Match: A0A6J1IDF5 (RNA-binding protein 7-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111472063 PE=4 SV=1) HSP 1 Score: 260.8 bits (665), Expect = 3.8e-66 Identity = 135/159 (84.91%), Postives = 147/159 (92.45%), Query Frame = 0
BLAST of Bhi06G000179 vs. ExPASy TrEMBL
Match: A0A6J1EX61 (RNA-binding protein 7 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111438905 PE=4 SV=1) HSP 1 Score: 237.7 bits (605), Expect = 3.4e-59 Identity = 123/157 (78.34%), Postives = 137/157 (87.26%), Query Frame = 0
BLAST of Bhi06G000179 vs. ExPASy TrEMBL
Match: A0A6J1I8J0 (RNA-binding protein 7-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111471946 PE=4 SV=1) HSP 1 Score: 236.5 bits (602), Expect = 7.6e-59 Identity = 122/157 (77.71%), Postives = 137/157 (87.26%), Query Frame = 0
BLAST of Bhi06G000179 vs. ExPASy TrEMBL
Match: A0A6J1I7S0 (RNA-binding protein 7-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111472063 PE=4 SV=1) HSP 1 Score: 228.8 bits (582), Expect = 1.6e-56 Identity = 118/142 (83.10%), Postives = 130/142 (91.55%), Query Frame = 0
BLAST of Bhi06G000179 vs. ExPASy TrEMBL
Match: A0A0A0KXV1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G648670 PE=4 SV=1) HSP 1 Score: 224.9 bits (572), Expect = 2.3e-55 Identity = 119/141 (84.40%), Postives = 130/141 (92.20%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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