CmoCh14G000600.1 (mRNA) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAGGTCTGCGCGCCCTGCAAGTTTGGCGATCTTTGATGGACTGGCTCTCTTTCATTTCTCCTATAATTGTTCAGATCGTGCATGGTGCTCCTTCTTTGGCTTAGGTTTGGTCCTGCGTTGGTGTTAGATTCCCTCTTCTTGCCTCATCTGCGCCCTCTTTCAAGCCCTTGCCCGATGCTGAGCTTCCTCTTCATCAGTTTTCAGCAAAGAAAGTTATCTCTCTCAGTGTTGTGGATGATCGTGGAAGTCAAGGTCTCCCTTGGGAAAAGATTACGGTAACGTGCGTCGTGTCTTCTTCTTTCCTTTTATAATTATGAAGAAATTTTGAGGCTAAATTGATGATTGTGGACATTGTAGAAGTACGATGATGAGGCAATCTTTGTCGTCGAATTCTTAGATGATAGAGCGTCGGTATCGGTATGTGATTTCCTAGTTTAGATGTTATTTTGAATTGAATTCTAAATTCCGTTGGTTATGGACTTCCACCGTATTTCTTTTAGCTATCACTGCTATCTATGTTCGGAGACCTGTTGTTAATAAGGTTGAGATCAAACCAAGGTTAGGTTTATGCATTTGCCATGCTAGTGTTTTAAATACTTCAATTTCTCATTCAGGTGGTTCTTAATTTGGATGAAACCAGGGTTTGTGCATATGAAACATCCAGTTTGCCAGTCGTTTCTGGCATTCAAGCAACAGAAGCTGGATTTAATTGGTCCGAGCTGGAATGTGTATCCTCGGACAAGGTACCTCTGGATTTCTCTTTCTGGCTTACAGTTTTTTGAAACTTTCCTTGAAATTTATATTATTCATCGATTAATGTTGGAAGCTCTGTTGACGGAATGTGAAGGAAAACCAAAGATCAGTTACGTGACCCTATTCGAACGTCCTGGATTGCATGAGTTCTTGAGCCAGGCTATTGATTTTCCGAACGTATATTACTTACTGCTGGTCTTGAAGGTTTGACATTGATTAATCGGTCTCTTTTGTGACTTTCCCCTTGTTATTCCATTGTCATATGTGGTCTTTTGTGGATGTACAGGATATGCTAGACCGCTGGTGA ATGGAGGTTTGGTCCTGCGTTGGTGTTAGATTCCCTCTTCTTGCCTCATCTGCGCCCTCTTTCAAGCCCTTGCCCGATGCTGAGCTTCCTCTTCATCAGTTTTCAGCAAAGAAAGTTATCTCTCTCAGTGTTGTGGATGATCGTGGAAGTCAAGGTCTCCCTTGGGAAAAGATTACGAAGTACGATGATGAGGCAATCTTTGTCGTCGAATTCTTAGATGATAGAGCGTCGGTATCGGTGGTTCTTAATTTGGATGAAACCAGGGTTTGTGCATATGAAACATCCACTGGAATGTGTATCCTCGGACAAGGAAAACCAAAGATCAGTTACGTGACCCTATTCGAACGTCCTGGATTGCATGAGTTCTTGAGCCAGGCTATTGATTTTCCGAACGTATATTACTTACTGCTGGTCTTGAAGGATATGCTAGACCGCTGGTGA ATGGAGGTTTGGTCCTGCGTTGGTGTTAGATTCCCTCTTCTTGCCTCATCTGCGCCCTCTTTCAAGCCCTTGCCCGATGCTGAGCTTCCTCTTCATCAGTTTTCAGCAAAGAAAGTTATCTCTCTCAGTGTTGTGGATGATCGTGGAAGTCAAGGTCTCCCTTGGGAAAAGATTACGAAGTACGATGATGAGGCAATCTTTGTCGTCGAATTCTTAGATGATAGAGCGTCGGTATCGGTGGTTCTTAATTTGGATGAAACCAGGGTTTGTGCATATGAAACATCCACTGGAATGTGTATCCTCGGACAAGGAAAACCAAAGATCAGTTACGTGACCCTATTCGAACGTCCTGGATTGCATGAGTTCTTGAGCCAGGCTATTGATTTTCCGAACGTATATTACTTACTGCTGGTCTTGAAGGATATGCTAGACCGCTGGTGA MEVWSCVGVRFPLLASSAPSFKPLPDAELPLHQFSAKKVISLSVVDDRGSQGLPWEKITKYDDEAIFVVEFLDDRASVSVVLNLDETRVCAYETSTGMCILGQGKPKISYVTLFERPGLHEFLSQAIDFPNVYYLLLVLKDMLDRW Homology
BLAST of CmoCh14G000600.1 vs. ExPASy TrEMBL
Match: A0A0A0LDE8 (FCP1 homology domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G731190 PE=4 SV=1) HSP 1 Score: 134.4 bits (337), Expect = 3.8e-28 Identity = 78/153 (50.98%), Postives = 93/153 (60.78%), Query Frame = 0
BLAST of CmoCh14G000600.1 vs. ExPASy TrEMBL
Match: A0A5A7TRF8 (CTD nuclear envelope phosphatase 1-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold236G005280 PE=4 SV=1) HSP 1 Score: 132.9 bits (333), Expect = 1.1e-27 Identity = 80/163 (49.08%), Postives = 95/163 (58.28%), Query Frame = 0
BLAST of CmoCh14G000600.1 vs. ExPASy TrEMBL
Match: A0A5D3DN66 (CTD nuclear envelope phosphatase 1-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G00790 PE=4 SV=1) HSP 1 Score: 132.9 bits (333), Expect = 1.1e-27 Identity = 78/150 (52.00%), Postives = 91/150 (60.67%), Query Frame = 0
BLAST of CmoCh14G000600.1 vs. ExPASy TrEMBL
Match: E5GBF3 (FCP1 homology domain-containing protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1) HSP 1 Score: 132.9 bits (333), Expect = 1.1e-27 Identity = 78/150 (52.00%), Postives = 91/150 (60.67%), Query Frame = 0
BLAST of CmoCh14G000600.1 vs. ExPASy TrEMBL
Match: A0A1S3B5M9 (carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1-like OS=Cucumis melo OX=3656 GN=LOC103486293 PE=4 SV=1) HSP 1 Score: 132.9 bits (333), Expect = 1.1e-27 Identity = 78/150 (52.00%), Postives = 91/150 (60.67%), Query Frame = 0
BLAST of CmoCh14G000600.1 vs. TAIR 10
Match: AT3G55960.1 (Haloacid dehalogenase-like hydrolase (HAD) superfamily protein ) HSP 1 Score: 67.4 bits (163), Expect = 1.1e-11 Identity = 58/163 (35.58%), Postives = 73/163 (44.79%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
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