Spg027964 (gene) Sponge gourd (cylindrica) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TGAAATTTCTCTCTCCCCGACCTGAAATTTCTCTCCCCCGAAAAAACCCTCAAAACTTTTCTCCCTCCCGTGTCTCTTTCTCCTTCCTCTCGATCTCCCTCTCGTCTTCTCCTAGATCAACCGCACCAGCACCACCAAATCGCCGCAGGTATGTTTGACGCACCAGCACCACCAAGTCGCCGCAGGTATGTTTGTAGCAATCTCCTTGTATTCCTTCTTTTTCTGAAACTTATTAGGTTTTGTTTTTAGGTATGTTCAAATTTAGTGCCCCAAAAATCCACCGGAGTCCAATTTCAACCCGAAATAGGAAAAGAAGAAAAGGGCAGAGAAGAAGAAGAAGAGAGAACTGAAGAACTTCTCACTTTCGACTTCCAGTTCCAGAACGAAGCGCAGATTCCATTGTTGCAGCTCGCACCGGAGCTTCCTTCCAATCTCTTCATCTCTGTAGCCGGTGGCAACCCTCTTCTTCCCCATTCCATTCTTCCATATTCTCTGTAAGTATTACGTGTTACCAATTTTTCTCCGTTATGTATATTCTCTCTATCTTGAGCCTTTTCGTTTTTCTCTGTTTAGGATTATGCCAGACGTGCTAGCCCTTGTGAATGATTTCGTTATCAAGCTCAAGAAGCAGTTAGTTCTTTGGGATTGGTGATATTTCTGAAAATTGAGTTGTAGCCTATGTTTTAGTTTTTTCGTTTTTATGGTTCGCTTTGTGATGATATTGTGGCAGTAAAATTGAGGGCTCCTTGGCCACCGCGAAGCATACGGCTAAATTGCTTCGTTCTGTCATTTCGCAGCAGCGAATACCCTACACGAACCAGGCGGCTGCTTTAATTCGTGCTGGGAAAGCTGTTGGCGAGCAGCTGATTGCTGCGAATCCTGTTGGTATACATTAATTTATTAGTTCTGTTTATTATGACTTAATGTTTAACCTCAGTTTAGTTGTTTGGAAATTTACCCTTTGCATAATTATATTCAATTTGTTTCCATGGCTGGTTCTTTATTCAGGCTGAAAATGAATTGTTAATCACCTCTCAATTATCATTATTCGTTCTTGGCCATGTTTGTTGCGTACACTGTCCTTATGTGATGGTCTATAGTTGTACTTTACTATTACTTATTGAAAACACTTTCTGCGTTTATGTATAAACCTTTCAAGGTTCACGTAATGGTGAAGGATCATCAATGGTGTCCATTGGATTATTATATCAATCGAATTTACCATTCATTGGTTAGACAAGCATATCTTCATTGTGGCGATTTTTCATTTTATTTACATCTGTCATCTGTTTGAAGTAGTAGAAATTAAGTTGTAAGCATGCTATGTGTGTTAAATTGGTCTAAAACAAATTGTCCTCATTTCCAGGTTCTTTGTATTATTTGATTTCTACAATGAATTCTAAACAAAATATCAGAGGCAGTAGGGTATATTTTATTTTTCTTTGTTATAGCACCTCGCTGCAAGGAAAGAGAAGTCTGCACTCCGAGCTGTGCATGTCATCTTATATAAGTCCGCCAAATGCTTCTTTAACTTTGAACAGGATGGAGTTAAGTGATATGTGTGTTATATGCTGCTGATTTTGATTTAGTCTGTACTTTTCATGAGTCATGTGTATTTATTTGGGTGATCTCTTTTCTTTAGAAAATAAGTTTATTGGGTTTTGTTTTTCTGGTTTGACGTTGTTTTTTTATTGGGTTTATTTGTCTGACCATCTCATTTTATTTTTTTTCTACTTTCGAGACAAAACACACATGCAGGCAACATAACTTTTTTTTGCCTTTCCTCTTCCTCTTGGGTTTTTTTTATTGGGTTTTTCTTTGCTTTTGAGTTTTCTTTTGGTTGTTTTATTTTCTAATCTCTATTATTTTGGTTGTGAGCTTTATGTTCTTTGTTGCATTTTCTTGCCACAACTGGACATAGAAGCACCATGAAAGGAAAGAACATATCTATTTATTTACTTATTCATTTACTTCTGGTTGTTTCTTTGTAATTAGTTTTTAAGTAACAAACAGATGGAGCTTTTGTGTTCATGCTGAACCCCATCACTTTATATTGTTAAGTTTCCTTTAGAATCTTCTACAACAAGTGTGATAAGGAAAAACTTCCTTTCCTTTTAGGATTGGCTATAACATGACTTCAGATGCAGAGAAAAGTGGTCTTATCACTCTGAGGAAGGTTAGCAATTTAGAATGATCTTTTAAAATCCAAGTGTAAACTGCAATGTTTTGGGGTGCAAAGATCAGGCTAGTTTGGTTGATTCCCCAATTGCCTTGTTGCTGTGTTATTTCCTGCAAATCATTGGAATTTAAACAAATTACTTGGGGAATTTAAACAAATAATGAGAAGGTTCCTTAGTTTTTAATCCCATTTTTGGCATCTATAGTGTTTGATTTTTGATCTATGGTATTTTTGGACAGTTTTATGAGTTCCATGGACAACTTGTTGATGCATTATGTGATATTATGCATTTTTTTTTGTTTGTGTTTCTAGAATATCGTCAGGACATTGGTTGACATTGGTTGTTCATTTTGCCTATTACCGATGGTTCATTTTAGATACTTTCTGTTGTTAGACTTCTTCAAGGTGAGGTCGACCAATGGTGTCTATGATAAAAGTTGAGAAGACACCTTTAGAGTTATAGGCTTTCAAAGGTGAGTGTTTGACTCTCTAATTAAATTCGTGTTATTTCTACCCTTATGAATCTATTTATAGTTTCAGCTACCCAGATATTCTCTAAAAACTTAGATGAATAGATGTGTCTCGCGTGCTCTCCTCTTCGTGAATGTTGATTCTTAACACAAGTTTTGATATGTTTCCTAATTGGTGAGGATTTTCTTTGTTATTAAGCTAATTTAATGAGTAATTAAACTTTGGGACCTTGGAGGGCAAAGGAGATTTCGTACAATGTGGGAGCAATATTGTCGTGGCGTGACTACAATTGTGTAAATATCCCAAGTCTCTAAACTTTTATCCATTTTAGCTAGACTTGTTACTTTAGCTTACAATATGTGGCTGATTGTTTATCTTTATTTAACTTTGCTTACTGCTCTTAAGGTCACAAGAAATTGTCTTTACCTGTTTTCTTCATGTAGGATGCTAGTATATGAATATGTGAACAATGGAAATCTAGAAAAGTGGTTGCTTGGAGCCATGTGCCAACACGACACACTTACTTGGAAGGCTTGCATGAAGGTGCTTCTT ATGTTTGACGCACCAGCACCACCAAGTCGCCGCAGAGAAGAAGAAGAAGAGAGAACTGAAGAACTTCTCACTTTCGACTTCCAGTTCCAGAACGAAGCGCAGATTCCATTGTTGCAGCTCGCACCGGAGCTTCCTTCCAATCTCTTCATCTCTGTAGCCGGTGGCAACCCTCTTCTTCCCCATTCCATTCTTCCATATTCTCTGATTATGCCAGACGTGCTAGCCCTTGTGAATGATTTCGTTATCAAGCTCAAGAAGCATAAAATTGAGGGCTCCTTGGCCACCGCGAAGCATACGGCTAAATTGCTTCGTTCTGTCATTTCGCAGCAGCGAATACCCTACACGAACCAGGCGGCTGCTTTAATTCGTGCTGGGAAAGCTGTTGGCGAGCAGCTGATTGCTGCGAATCCTGTTGGTATACATTAA ATGTTTGACGCACCAGCACCACCAAGTCGCCGCAGAGAAGAAGAAGAAGAGAGAACTGAAGAACTTCTCACTTTCGACTTCCAGTTCCAGAACGAAGCGCAGATTCCATTGTTGCAGCTCGCACCGGAGCTTCCTTCCAATCTCTTCATCTCTGTAGCCGGTGGCAACCCTCTTCTTCCCCATTCCATTCTTCCATATTCTCTGATTATGCCAGACGTGCTAGCCCTTGTGAATGATTTCGTTATCAAGCTCAAGAAGCATAAAATTGAGGGCTCCTTGGCCACCGCGAAGCATACGGCTAAATTGCTTCGTTCTGTCATTTCGCAGCAGCGAATACCCTACACGAACCAGGCGGCTGCTTTAATTCGTGCTGGGAAAGCTGTTGGCGAGCAGCTGATTGCTGCGAATCCTGTTGGTATACATTAA MFDAPAPPSRRREEEEERTEELLTFDFQFQNEAQIPLLQLAPELPSNLFISVAGGNPLLPHSILPYSLIMPDVLALVNDFVIKLKKHKIEGSLATAKHTAKLLRSVISQQRIPYTNQAAALIRAGKAVGEQLIAANPVGIH Homology
BLAST of Spg027964 vs. NCBI nr
Match: KAG6579110.1 (E3 ubiquitin-protein ligase DIS1, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 147.5 bits (371), Expect = 8.6e-32 Identity = 85/129 (65.89%), Postives = 95/129 (73.64%), Query Frame = 0
BLAST of Spg027964 vs. NCBI nr
Match: XP_022990650.1 (translation initiation factor eIF-2B subunit beta-like [Cucurbita maxima]) HSP 1 Score: 117.9 bits (294), Expect = 7.3e-23 Identity = 64/69 (92.75%), Postives = 65/69 (94.20%), Query Frame = 0
BLAST of Spg027964 vs. NCBI nr
Match: XP_022923286.1 (translation initiation factor eIF-2B subunit beta-like [Cucurbita moschata] >XP_023535169.1 translation initiation factor eIF-2B subunit beta-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 117.9 bits (294), Expect = 7.3e-23 Identity = 64/69 (92.75%), Postives = 65/69 (94.20%), Query Frame = 0
BLAST of Spg027964 vs. NCBI nr
Match: XP_038874367.1 (translation initiation factor eIF-2B subunit beta [Benincasa hispida] >XP_038874368.1 translation initiation factor eIF-2B subunit beta [Benincasa hispida]) HSP 1 Score: 117.5 bits (293), Expect = 9.5e-23 Identity = 63/69 (91.30%), Postives = 65/69 (94.20%), Query Frame = 0
BLAST of Spg027964 vs. NCBI nr
Match: KAG7032647.1 (Translation initiation factor eIF-2B subunit beta [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 116.7 bits (291), Expect = 1.6e-22 Identity = 63/69 (91.30%), Postives = 65/69 (94.20%), Query Frame = 0
BLAST of Spg027964 vs. ExPASy TrEMBL
Match: A0A6J1JQN6 (translation initiation factor eIF-2B subunit beta-like OS=Cucurbita maxima OX=3661 GN=LOC111487472 PE=3 SV=1) HSP 1 Score: 117.9 bits (294), Expect = 3.5e-23 Identity = 64/69 (92.75%), Postives = 65/69 (94.20%), Query Frame = 0
BLAST of Spg027964 vs. ExPASy TrEMBL
Match: A0A6J1E6E7 (translation initiation factor eIF-2B subunit beta-like OS=Cucurbita moschata OX=3662 GN=LOC111431025 PE=3 SV=1) HSP 1 Score: 117.9 bits (294), Expect = 3.5e-23 Identity = 64/69 (92.75%), Postives = 65/69 (94.20%), Query Frame = 0
BLAST of Spg027964 vs. ExPASy TrEMBL
Match: A0A6J1JUB9 (translation initiation factor eIF-2B subunit beta-like OS=Cucurbita maxima OX=3661 GN=LOC111488975 PE=3 SV=1) HSP 1 Score: 115.9 bits (289), Expect = 1.3e-22 Identity = 63/69 (91.30%), Postives = 64/69 (92.75%), Query Frame = 0
BLAST of Spg027964 vs. ExPASy TrEMBL
Match: A0A6J1FNF3 (translation initiation factor eIF-2B subunit beta-like OS=Cucurbita moschata OX=3662 GN=LOC111445501 PE=3 SV=1) HSP 1 Score: 115.9 bits (289), Expect = 1.3e-22 Identity = 63/69 (91.30%), Postives = 64/69 (92.75%), Query Frame = 0
BLAST of Spg027964 vs. ExPASy TrEMBL
Match: A0A1S3CPD3 (translation initiation factor eIF-2B subunit beta OS=Cucumis melo OX=3656 GN=LOC103503289 PE=3 SV=1) HSP 1 Score: 115.5 bits (288), Expect = 1.8e-22 Identity = 63/69 (91.30%), Postives = 64/69 (92.75%), Query Frame = 0
BLAST of Spg027964 vs. TAIR 10
Match: AT3G07300.1 (NagB/RpiA/CoA transferase-like superfamily protein ) HSP 1 Score: 93.6 bits (231), Expect = 1.4e-19 Identity = 51/69 (73.91%), Postives = 58/69 (84.06%), Query Frame = 0
BLAST of Spg027964 vs. TAIR 10
Match: AT3G07300.2 (NagB/RpiA/CoA transferase-like superfamily protein ) HSP 1 Score: 93.6 bits (231), Expect = 1.4e-19 Identity = 51/69 (73.91%), Postives = 58/69 (84.06%), Query Frame = 0
BLAST of Spg027964 vs. TAIR 10
Match: AT3G07300.3 (NagB/RpiA/CoA transferase-like superfamily protein ) HSP 1 Score: 93.6 bits (231), Expect = 1.4e-19 Identity = 51/69 (73.91%), Postives = 58/69 (84.06%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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