Sed0010286.1 (mRNA) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTGCAGAAGCACCAAGCTGGGCTGACCAATGGGGAGCCGGAGGGATTGGAGCCATGGAAGAAGACAACGGCATTAAAGCCAAAGGAAACTGCAGCTCAGACAAGAAGGCTGGTTCTAAGCATGGATTTGCAAGAGCCAAGGCGGCGACGGTGGCGGGTGCCAAAAAGATTGGAACTCGGATATCTAATGGCATCAAATGGATCATGAACCCACGCAAGAAAAGCTCCAAGTAA ATGGCTGCAGAAGCACCAAGCTGGGCTGACCAATGGGGAGCCGGAGGGATTGGAGCCATGGAAGAAGACAACGGCATTAAAGCCAAAGGAAACTGCAGCTCAGACAAGAAGGCTGGTTCTAAGCATGGATTTGCAAGAGCCAAGGCGGCGACGGTGGCGGGTGCCAAAAAGATTGGAACTCGGATATCTAATGGCATCAAATGGATCATGAACCCACGCAAGAAAAGCTCCAAGTAA ATGGCTGCAGAAGCACCAAGCTGGGCTGACCAATGGGGAGCCGGAGGGATTGGAGCCATGGAAGAAGACAACGGCATTAAAGCCAAAGGAAACTGCAGCTCAGACAAGAAGGCTGGTTCTAAGCATGGATTTGCAAGAGCCAAGGCGGCGACGGTGGCGGGTGCCAAAAAGATTGGAACTCGGATATCTAATGGCATCAAATGGATCATGAACCCACGCAAGAAAAGCTCCAAGTAA MAAEAPSWADQWGAGGIGAMEEDNGIKAKGNCSSDKKAGSKHGFARAKAATVAGAKKIGTRISNGIKWIMNPRKKSSK Homology
BLAST of Sed0010286.1 vs. NCBI nr
Match: KGN49108.1 (hypothetical protein Csa_002989 [Cucumis sativus]) HSP 1 Score: 126.7 bits (317), Expect = 8.7e-26 Identity = 66/78 (84.62%), Postives = 70/78 (89.74%), Query Frame = 0
BLAST of Sed0010286.1 vs. NCBI nr
Match: KAG6603780.1 (Ankyrin repeat domain-containing protein 13B, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 126.3 bits (316), Expect = 1.1e-25 Identity = 66/78 (84.62%), Postives = 69/78 (88.46%), Query Frame = 0
BLAST of Sed0010286.1 vs. NCBI nr
Match: KAG7033951.1 (Ankyrin repeat domain-containing protein 13B, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 126.3 bits (316), Expect = 1.1e-25 Identity = 66/78 (84.62%), Postives = 69/78 (88.46%), Query Frame = 0
BLAST of Sed0010286.1 vs. NCBI nr
Match: KAG7026631.1 (hypothetical protein SDJN02_10634, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 124.0 bits (310), Expect = 5.6e-25 Identity = 65/77 (84.42%), Postives = 70/77 (90.91%), Query Frame = 0
BLAST of Sed0010286.1 vs. NCBI nr
Match: TYK13043.1 (Ankyrin repeat family protein, putative isoform 1 [Cucumis melo var. makuwa]) HSP 1 Score: 123.6 bits (309), Expect = 7.3e-25 Identity = 66/78 (84.62%), Postives = 72/78 (92.31%), Query Frame = 0
BLAST of Sed0010286.1 vs. ExPASy TrEMBL
Match: A0A0A0KHT9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G513720 PE=4 SV=1) HSP 1 Score: 126.7 bits (317), Expect = 4.2e-26 Identity = 66/78 (84.62%), Postives = 70/78 (89.74%), Query Frame = 0
BLAST of Sed0010286.1 vs. ExPASy TrEMBL
Match: A0A5D3CM93 (Ankyrin repeat family protein, putative isoform 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G006450 PE=4 SV=1) HSP 1 Score: 123.6 bits (309), Expect = 3.6e-25 Identity = 66/78 (84.62%), Postives = 72/78 (92.31%), Query Frame = 0
BLAST of Sed0010286.1 vs. ExPASy TrEMBL
Match: A0A4S4DD10 (Uncharacterized protein OS=Camellia sinensis var. sinensis OX=542762 GN=TEA_005506 PE=4 SV=1) HSP 1 Score: 86.7 bits (213), Expect = 4.8e-14 Identity = 45/75 (60.00%), Postives = 54/75 (72.00%), Query Frame = 0
BLAST of Sed0010286.1 vs. ExPASy TrEMBL
Match: M5WYJ4 (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_4G019700 PE=4 SV=1) HSP 1 Score: 85.9 bits (211), Expect = 8.2e-14 Identity = 47/80 (58.75%), Postives = 57/80 (71.25%), Query Frame = 0
BLAST of Sed0010286.1 vs. ExPASy TrEMBL
Match: A0A6P5T3Q0 (uncharacterized protein LOC110763130 OS=Prunus avium OX=42229 GN=LOC110763130 PE=4 SV=1) HSP 1 Score: 85.9 bits (211), Expect = 8.2e-14 Identity = 47/80 (58.75%), Postives = 57/80 (71.25%), Query Frame = 0
BLAST of Sed0010286.1 vs. TAIR 10
Match: AT1G11740.1 (ankyrin repeat family protein ) HSP 1 Score: 46.2 bits (108), Expect = 1.4e-05 Identity = 29/77 (37.66%), Postives = 39/77 (50.65%), Query Frame = 0
BLAST of Sed0010286.1 vs. TAIR 10
Match: AT1G62045.1 (BEST Arabidopsis thaliana protein match is: ankyrin repeat family protein (TAIR:AT1G11740.1); Has 26 Blast hits to 26 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 26; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 44.7 bits (104), Expect = 4.0e-05 Identity = 34/78 (43.59%), Postives = 43/78 (55.13%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
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