Sed0002973.3 (mRNA) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATTTTAATCACATCCAATTGGAGACGACCCAGAAGCCAAATCTTCTTCATTTATTGTTTTTATTCTTCAATTTACCAAGTAAACGCTTCCCACTGAAGAAAAAAATTTGGGTTTCCAAATAAAAAAGCTCTCCCCAGCAACAAAGCATTGATATCTTCCATTGGCGAAAAGAAAAGTTGTAAGCAAATGATGCTTCTTTATTTAAAGTGAATACTTGGGGTTTTTAGATGGAACCATGTTTCTCCCTTTTCGTTATTAGTTTTGTTAGTTGAAAAACTGAGTTTTGGGAAATTTTGTTTTCGATTCATGGATGAAGAAGAAAGAAATCGCCAAGAAGGTGTATTGTTTGAAACAGGGCTGCCTAAATCCACTGTTGATTTGGTTAACGAGGATAAGATCGAGGCCAGCGTTGTGATAATCCCAGAAGCTATATCAAATGTTAATCCAGAAACAAGAGAGGATTCAAACCCTTTGGAAACTGTGGTGGTTATTGATTCAGACGAAGAATCGGTTGCGAAGAACAGTGGAATGGGGCTGAGAAAGGATATGGAAAAGATGGATGTGAAGTCAAAGATGTTGGCAAATGTAAAGCCAAAAGGGTGTAAAGGGTTTATGGAAGAGTTGAATGGAGAAAGGGTATGTAGGATCTGCCACTTGGGTTCCAACCAAGCTTCAGAGTTGGTTCAACTTGGTTGTGACTGTAAACATGAGCTTGGAATTGCTCATACTCACTGTGCTGAGGCATGGTTCAAGCTCAAAGGAAACAGGTTGGTTTAAAATGAAGTTTTTGTGCCTTTTTGTTTTGCTGGTATCTTAGGATTTGGTATTGACATTTGATGAAGTTTTGTGATTTTGAATTGTTAGGAACCACCTACTCTACCCGAGACCCTCCACATTGAAGTGATATTGTCCACTTTGGGCATAACCCTCATGGCTTTGTTTTTGGGCATCTCCCAAAAGGGGCTCATACCAATGGAGGCTCTGGTCATCCCATTTATACCCATGAACTTTCCCCTCTCTTTCCCATGTGGGACAATTGGTTGCAATACCAACATGAATGTATATCTTTGTTCTCTTGTTGTAACTTGTAGCTGCTAATCCTACCATTAGTCCCCAAACCTGGGTTTCTAAGGTGTATTCCCCTCAAAATTCCACTGTGACATTAATTTGTAAGCCTCCCGTGTCTTCATTTCTTCTATGTTTCTCGGTGCTTGGCCTAGGGATAGGCGTGGTTACCTCGTAATTCCCAGTTTCCAAAAGACAAAATCCGGCAATTAACCAAAACTTTTATCTTCCCTCATTTGTTTCAGAAAATAGTTTTTTTTTTTACACTTTTTGCCTATCGAAGGATTGCCCAATTGAGTTTTAGTAACCTGTTAAAATAGATGAAAAGCCCTTCTATTTCTGTAGATTGAGGAGAATAAGCTACAAAAAGGAAAATAAAGCCAACTTACTAATATGGGGAGAAATGTTTCAGGTTGCATCCATTCTTTTATTTGTTTCTGTTATCTAGAAGACATGAGCCATTACACAATCAATAGAATGAAGCAGTGACATAAAAATGTAGTTATGTAAAGGGGCTAAAATATGGTTCTATGATATTATGAAAGGGGGTATGGAAGGTTTATTTTTCTGCCTTTTCCAATGGGAGGTTTTTAGTTCGGTGGTTTGTAACTTTGTAGTCGCCTCAACGAATCTTAACAGGTTTTATTTTCCGGGTAGTAACTACGGTCTACGCATATTAAGTTTTTTGGTTCAAACTTACAGACTTCCATTTTCCTGGTGTAGAGAGTGATAGTTGGTGTCTGATTATGTTTATACAACTCGATGATAGATCATAAATGTAAAGATAAGTTTCTGTTTCTTTTGGTAATTCAGTTACAAACTGCCAAATGGATTTTTGAAGTATAGCTCTCTTATGTTGAGACTATATGCTTTCGATGAAGTCGAAATGCTGCAGAAGAGATCGAGTATTGAACGGTTTCACATTGATCAAGTCAAATGTTTTTTGTATACATTTGTATCAGTATGTGATAAGTATAAAGAAAAGAGCTCAAAACCACTGCATGTCATTTGGCAACTCCTGGAGATTTAATTTCAAACTACAATTTTCTTTTCATTTTGTCAAATGACTATCGATTATATGATCATAATCATCTAGTCTTTTTCCTTAATACAGAATGTGCGAAATTTGCGGCGAGATTGCTAAGAACGTTGAAGGAGTCGGGGACAGTAGATTTATGGAAGAGTGGAACGAGGGAAGGTCGGTAGATAGCAATGGAAACATATCAAGCAGAGGCTGGGGATGTTGGAGAGGACAGCCATTCTGTAACTTCTTGATGGCATGTTTGGTAATAGCCTTTGTTCTTCCATGGTTTCTTCGCGTAAACATTTTCTAGCAAGTGTCGAATAATTGAAAGAGGGCCTTGGAGTGCTTAATGGCCACCTATCTAAGAATTAATTTTCTACGAGATTCCTTGACATCCAAATGTGGTAGGGTCAGACGGTATATCTCGTGACATTAGTCGAGGTGCGCACAAGTACAATCACGGA ATTTTAATCACATCCAATTGGAGACGACCCAGAAGCCAAATCTTCTTCATTTATTGTTTTTATTCTTCAATTTACCAAGTAAACGCTTCCCACTGAAGAAAAAAATTTGGGTTTCCAAATAAAAAAGCTCTCCCCAGCAACAAAGCATTGATATCTTCCATTGGCGAAAAGAAAAGTTGTAAGCAAATGATGCTTCTTTATTTAAAGTGAATACTTGGGGTTTTTAGATGGAACCATGTTTCTCCCTTTTCGTTATTAGTTTTGTTAGTTGAAAAACTGAGTTTTGGGAAATTTTGTTTTCGATTCATGGATGAAGAAGAAAGAAATCGCCAAGAAGGTGTATTGTTTGAAACAGGGCTGCCTAAATCCACTGTTGATTTGGTTAACGAGGATAAGATCGAGGCCAGCGTTGTGATAATCCCAGAAGCTATATCAAATGTTAATCCAGAAACAAGAGAGGATTCAAACCCTTTGGAAACTGTGGTGGTTATTGATTCAGACGAAGAATCGGTTGCGAAGAACAGTGGAATGGGGCTGAGAAAGGATATGGAAAAGATGGATGTGAAGTCAAAGATGTTGGCAAATGTAAAGCCAAAAGGGTGTAAAGGGTTTATGGAAGAGTTGAATGGAGAAAGGGTATGTAGGATCTGCCACTTGGGTTCCAACCAAGCTTCAGAGTTGGTTCAACTTGGTTGTGACTGTAAACATGAGCTTGGAATTGCTCATACTCACTGTGCTGAGGCATGGTTCAAGCTCAAAGGAAACAGGAACCACCTACTCTACCCGAGACCCTCCACATTGAAGTGATATTGTCCACTTTGGGCATAACCCTCATGGCTTTGTTTTTGGGCATCTCCCAAAAGGGGCTCATACCAATGGAGGCTCTGGTCATCCCATTTATACCCATGAACTTTCCCCTCTCTTTCCCATGTGGGACAATTGGTTGCAATACCAACATGAATGTATATCTTTGTTCTCTTGTTGTAACTTGTAGCTGCTAATCCTACCATTAGTCCCCAAACCTGGGTTTCTAAGGTGTATTCCCCTCAAAATTCCACTGTGACATTAATTTGTAAGCCTCCCGTGTCTTCATTTCTTCTATGTTTCTCGGTGCTTGGCCTAGGGATAGGCGTGGTTACCTCGTAATTCCCAGTTTCCAAAAGACAAAATCCGGCAATTAACCAAAACTTTTATCTTCCCTCATTTGTTTCAGAAAATAGTTTTTTTTTTTACACTTTTTGCCTATCGAAGGATTGCCCAATTGAGTTTTAGTAACCTGTTAAAATAGATGAAAAGCCCTTCTATTTCTGTAGATTGAGGAGAATAAGCTACAAAAAGGAAAATAAAGCCAACTTACTAATATGGGGAGAAATGTTTCAGGTTGCATCCATTCTTTTATTTGTTTCTGTTATCTAGAAGACATGAGCCATTACACAATCAATAGAATGAAGCAGTGACATAAAAATGTAGTTATGTAAAGGGGCTAAAATATGGTTCTATGATATTATGAAAGGGGGTATGGAAGGTTTATTTTTCTGCCTTTTCCAATGGGAGGTTTTTAGTTCGGTGGTTTGTAACTTTGTAGTCGCCTCAACGAATCTTAACAGGTTTTATTTTCCGGGTAGTAACTACGGTCTACGCATATTAAGTTTTTTGGTTCAAACTTACAGACTTCCATTTTCCTGGTGTAGAGAGTGATAGTTGGTGTCTGATTATGTTTATACAACTCGATGATAGATCATAAATGTAAAGATAAGTTTCTGTTTCTTTTGGTAATTCAGTTACAAACTGCCAAATGGATTTTTGAAGTATAGCTCTCTTATGTTGAGACTATATGCTTTCGATGAAGTCGAAATGCTGCAGAAGAGATCGAGTATTGAACGGTTTCACATTGATCAAGTCAAATGTTTTTTGTATACATTTGTATCAGTATGTGATAAGTATAAAGAAAAGAGCTCAAAACCACTGCATGTCATTTGGCAACTCCTGGAGATTTAATTTCAAACTACAATTTTCTTTTCATTTTGTCAAATGACTATCGATTATATGATCATAATCATCTAGTCTTTTTCCTTAATACAGAATGTGCGAAATTTGCGGCGAGATTGCTAAGAACGTTGAAGGAGTCGGGGACAGTAGATTTATGGAAGAGTGGAACGAGGGAAGGTCGGTAGATAGCAATGGAAACATATCAAGCAGAGGCTGGGGATGTTGGAGAGGACAGCCATTCTGTAACTTCTTGATGGCATGTTTGGTAATAGCCTTTGTTCTTCCATGGTTTCTTCGCGTAAACATTTTCTAGCAAGTGTCGAATAATTGAAAGAGGGCCTTGGAGTGCTTAATGGCCACCTATCTAAGAATTAATTTTCTACGAGATTCCTTGACATCCAAATGTGGTAGGGTCAGACGGTATATCTCGTGACATTAGTCGAGGTGCGCACAAGTACAATCACGGA ATGGATGAAGAAGAAAGAAATCGCCAAGAAGGTGTATTGTTTGAAACAGGGCTGCCTAAATCCACTGTTGATTTGGTTAACGAGGATAAGATCGAGGCCAGCGTTGTGATAATCCCAGAAGCTATATCAAATGTTAATCCAGAAACAAGAGAGGATTCAAACCCTTTGGAAACTGTGGTGGTTATTGATTCAGACGAAGAATCGGTTGCGAAGAACAGTGGAATGGGGCTGAGAAAGGATATGGAAAAGATGGATGTGAAGTCAAAGATGTTGGCAAATGTAAAGCCAAAAGGGTGTAAAGGGTTTATGGAAGAGTTGAATGGAGAAAGGGTATGTAGGATCTGCCACTTGGGTTCCAACCAAGCTTCAGAGTTGGTTCAACTTGGTTGTGACTGTAAACATGAGCTTGGAATTGCTCATACTCACTGTGCTGAGGCATGGTTCAAGCTCAAAGGAAACAGGAACCACCTACTCTACCCGAGACCCTCCACATTGAAGTGA MDEEERNRQEGVLFETGLPKSTVDLVNEDKIEASVVIIPEAISNVNPETREDSNPLETVVVIDSDEESVAKNSGMGLRKDMEKMDVKSKMLANVKPKGCKGFMEELNGERVCRICHLGSNQASELVQLGCDCKHELGIAHTHCAEAWFKLKGNRNHLLYPRPSTLK Homology
BLAST of Sed0002973.3 vs. NCBI nr
Match: XP_038883622.1 (uncharacterized protein LOC120074540 [Benincasa hispida]) HSP 1 Score: 194.9 bits (494), Expect = 5.5e-46 Identity = 119/211 (56.40%), Postives = 137/211 (64.93%), Query Frame = 0
BLAST of Sed0002973.3 vs. NCBI nr
Match: XP_011658254.1 (uncharacterized protein LOC105435966 isoform X1 [Cucumis sativus] >KGN49315.1 hypothetical protein Csa_004161 [Cucumis sativus]) HSP 1 Score: 193.7 bits (491), Expect = 1.2e-45 Identity = 117/202 (57.92%), Postives = 132/202 (65.35%), Query Frame = 0
BLAST of Sed0002973.3 vs. NCBI nr
Match: XP_008439727.1 (PREDICTED: uncharacterized protein LOC103484442 [Cucumis melo]) HSP 1 Score: 193.4 bits (490), Expect = 1.6e-45 Identity = 118/202 (58.42%), Postives = 133/202 (65.84%), Query Frame = 0
BLAST of Sed0002973.3 vs. NCBI nr
Match: XP_031744000.1 (uncharacterized protein LOC105435966 isoform X2 [Cucumis sativus]) HSP 1 Score: 191.8 bits (486), Expect = 4.7e-45 Identity = 116/201 (57.71%), Postives = 131/201 (65.17%), Query Frame = 0
BLAST of Sed0002973.3 vs. NCBI nr
Match: XP_023518695.1 (uncharacterized protein LOC111782129 isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 184.5 bits (467), Expect = 7.5e-43 Identity = 111/194 (57.22%), Postives = 128/194 (65.98%), Query Frame = 0
BLAST of Sed0002973.3 vs. ExPASy TrEMBL
Match: A0A0A0KHW6 (RING-CH-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G519670 PE=4 SV=1) HSP 1 Score: 193.7 bits (491), Expect = 6.0e-46 Identity = 117/202 (57.92%), Postives = 132/202 (65.35%), Query Frame = 0
BLAST of Sed0002973.3 vs. ExPASy TrEMBL
Match: A0A1S3B025 (uncharacterized protein LOC103484442 OS=Cucumis melo OX=3656 GN=LOC103484442 PE=4 SV=1) HSP 1 Score: 193.4 bits (490), Expect = 7.8e-46 Identity = 118/202 (58.42%), Postives = 133/202 (65.84%), Query Frame = 0
BLAST of Sed0002973.3 vs. ExPASy TrEMBL
Match: A0A6J1KTX6 (uncharacterized protein LOC111497182 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111497182 PE=4 SV=1) HSP 1 Score: 183.3 bits (464), Expect = 8.0e-43 Identity = 110/194 (56.70%), Postives = 127/194 (65.46%), Query Frame = 0
BLAST of Sed0002973.3 vs. ExPASy TrEMBL
Match: A0A6J1KX84 (uncharacterized protein LOC111497182 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111497182 PE=4 SV=1) HSP 1 Score: 183.3 bits (464), Expect = 8.0e-43 Identity = 110/194 (56.70%), Postives = 127/194 (65.46%), Query Frame = 0
BLAST of Sed0002973.3 vs. ExPASy TrEMBL
Match: A0A6J1ELN1 (uncharacterized protein LOC111433701 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111433701 PE=4 SV=1) HSP 1 Score: 179.1 bits (453), Expect = 1.5e-41 Identity = 109/194 (56.19%), Postives = 127/194 (65.46%), Query Frame = 0
BLAST of Sed0002973.3 vs. TAIR 10
Match: AT2G34200.1 (RING/FYVE/PHD zinc finger superfamily protein ) HSP 1 Score: 79.3 bits (194), Expect = 3.1e-15 Identity = 33/57 (57.89%), Postives = 42/57 (73.68%), Query Frame = 0
BLAST of Sed0002973.3 vs. TAIR 10
Match: AT2G37950.1 (RING/FYVE/PHD zinc finger superfamily protein ) HSP 1 Score: 62.8 bits (151), Expect = 3.0e-10 Identity = 24/47 (51.06%), Postives = 32/47 (68.09%), Query Frame = 0
BLAST of Sed0002973.3 vs. TAIR 10
Match: AT5G01070.1 (RING/FYVE/PHD zinc finger superfamily protein ) HSP 1 Score: 60.8 bits (146), Expect = 1.2e-09 Identity = 24/50 (48.00%), Postives = 33/50 (66.00%), Query Frame = 0
BLAST of Sed0002973.3 vs. TAIR 10
Match: AT5G05830.1 (RING/FYVE/PHD zinc finger superfamily protein ) HSP 1 Score: 60.8 bits (146), Expect = 1.2e-09 Identity = 38/111 (34.23%), Postives = 54/111 (48.65%), Query Frame = 0
BLAST of Sed0002973.3 vs. TAIR 10
Match: AT5G01070.2 (RING/FYVE/PHD zinc finger superfamily protein ) HSP 1 Score: 60.8 bits (146), Expect = 1.2e-09 Identity = 24/50 (48.00%), Postives = 33/50 (66.00%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
Relationships
This mRNA is a part of the following gene feature(s):
The following three_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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