Homology
BLAST of Lsi06G000580.1 vs. ExPASy Swiss-Prot
Match:
Q9XE98 (Pentatricopeptide repeat-containing protein At4g04370 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E99 PE=3 SV=1)
HSP 1 Score: 797.3 bits (2058), Expect = 1.4e-229
Identity = 391/722 (54.16%), Postives = 520/722 (72.02%), Query Frame = 0
Query: 13 STKSFNSLINRLSSQGAHHQVLQTYISFQNTNTPPDAYTFPSLLKACTNLNLFSNGLSIH 72
STK FNS IN LSS G H QVL T+ S PD +TFPSLLKAC +L S GLSIH
Sbjct: 10 STKYFNSHINHLSSHGDHKQVLSTFSSMLANKLLPDTFTFPSLLKACASLQRLSFGLSIH 69
Query: 73 QSVIVHGLSHDSYIGSSLISFYAKFGCIQFGRKVFDTMPERNVVPWTTLIGCYSRQGDID 132
Q V+V+G S D YI SSL++ YAKFG + RKVF+ M ER+VV WT +IGCYSR G +
Sbjct: 70 QQVLVNGFSSDFYISSSLVNLYAKFGLLAHARKVFEEMRERDVVHWTAMIGCYSRAGIVG 129
Query: 133 IAFSRFKQMRESGIQPTSVTFLSLLPGVSELPLLLCLHCLIVLYGFESDLALSNSMVNMY 192
A S +MR GI+P VT L +L GV E+ L CLH V+YGF+ D+A+ NSM+N+Y
Sbjct: 130 EACSLVNEMRFQGIKPGPVTLLEMLSGVLEITQLQCLHDFAVIYGFDCDIAVMNSMLNLY 189
Query: 193 GKCGRIADARSLFESMDYRDIVSWNSLLSAYSKIGGIEEILQLVQGMRIEDIKPDKQTFC 252
KC + DA+ LF+ M+ RD+VSWN+++S Y+ +G + EIL+L+ MR + ++PD+QTF
Sbjct: 190 CKCDHVGDAKDLFDQMEQRDMVSWNTMISGYASVGNMSEILKLLYRMRGDGLRPDQQTFG 249
Query: 253 SALSASAIKGDLRFGKLVHGLILKDGLDIDQQVETALVVLYLRCRCLDLAHKVFESTTEK 312
++LS S DL G+++H I+K G D+D ++TAL+ +YL+C + +++V E+ K
Sbjct: 250 ASLSVSGTMCDLEMGRMLHCQIVKTGFDVDMHLKTALITMYLKCGKEEASYRVLETIPNK 309
Query: 313 DVVLWTAMISGLVQNDCADKALGVFSQMIESNVELSTATLASALAACAQLGCCDIGTSIH 372
DVV WT MISGL++ A+KAL VFS+M++S +LS+ +AS +A+CAQLG D+G S+H
Sbjct: 310 DVVCWTVMISGLMRLGRAEKALIVFSEMLQSGSDLSSEAIASVVASCAQLGSFDLGASVH 369
Query: 373 GYVLRQGIMLDIPAQNSLVTMYAKCNKLEQSCSIFNKMVEKDLVSWNAIVAGHAKNGYLS 432
GYVLR G LD PA NSL+TMYAKC L++S IF +M E+DLVSWNAI++G+A+N L
Sbjct: 370 GYVLRHGYTLDTPALNSLITMYAKCGHLDKSLVIFERMNERDLVSWNAIISGYAQNVDLC 429
Query: 433 KAIFFFNEMR-TSLQRPDSITVTSLLQACGSAGALCQGKWIHNFVLRSSLIPCIMTETAL 492
KA+ F EM+ ++Q+ DS TV SLLQAC SAGAL GK IH V+RS + PC + +TAL
Sbjct: 430 KALLLFEEMKFKTVQQVDSFTVVSLLQACSSAGALPVGKLIHCIVIRSFIRPCSLVDTAL 489
Query: 493 VDMYFKCGNLEIAQKCFDYMLQQDLVTWSILIAGYGFNGKGEIALRKYSEFLGTGMEPNH 552
VDMY KCG LE AQ+CFD + +D+V+W ILIAGYGF+GKG+IAL YSEFL +GMEPNH
Sbjct: 490 VDMYSKCGYLEAAQRCFDSISWKDVVSWGILIAGYGFHGKGDIALEIYSEFLHSGMEPNH 549
Query: 553 VIFLSVLSACSHSGLISQGLSIYESMTKDFRMPANLEHRACIIDLLSRAGKVDEAYSFYK 612
VIFL+VLS+CSH+G++ QGL I+ SM +DF + N EH AC++DLL RA ++++A+ FYK
Sbjct: 550 VIFLAVLSSCSHNGMVQQGLKIFSSMVRDFGVEPNHEHLACVVDLLCRAKRIEDAFKFYK 609
Query: 613 MMFKEPSIDVLGILLDACRVNGSVELGKVIARDMFELKPVDAGNFLQLVHSYASMSRWDG 672
F PSIDVLGI+LDACR NG E+ +I DM ELKP DAG++++L HS+A+M RWD
Sbjct: 610 ENFTRPSIDVLGIILDACRANGKTEVEDIICEDMIELKPGDAGHYVKLGHSFAAMKRWDD 669
Query: 673 VEEAWTQMRSLGLKKLPGWSSIEVHGTSFTFFSVHNSHPKIEDIILTVKSLSNDIRKMHV 732
V E+W QMRSLGLKKLPGWS IE++G + TFF H SH +D + +K LS ++ +
Sbjct: 670 VSESWNQMRSLGLKKLPGWSKIEMNGKTTTFFMNHTSHS--DDTVSLLKLLSREMMQFGS 729
Query: 733 EN 734
N
Sbjct: 730 NN 729
BLAST of Lsi06G000580.1 vs. ExPASy Swiss-Prot
Match:
Q3E6Q1 (Pentatricopeptide repeat-containing protein At1g11290, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H40 PE=2 SV=1)
HSP 1 Score: 437.6 bits (1124), Expect = 2.9e-121
Identity = 234/710 (32.96%), Postives = 397/710 (55.92%), Query Frame = 0
Query: 46 PPDAYTFPS--LLKACTNLNLFSNGLSIHQSVIVHGLSHDSYIGSSLISFYAKFGCIQFG 105
P + Y P+ LL+ C++L L + V +GL + + + L+S + ++G +
Sbjct: 32 PANVYEHPAALLLERCSSLKELRQILPL---VFKNGLYQEHFFQTKLVSLFCRYGSVDEA 91
Query: 106 RKVFDTMPERNVVPWTTLIGCYSRQGDIDIAFSRFKQMRESGIQPTSVTFLSLLP---GV 165
+VF+ + + V + T++ +++ D+D A F +MR ++P F LL
Sbjct: 92 ARVFEPIDSKLNVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDE 151
Query: 166 SELPLLLCLHCLIVLYGFESDLALSNSMVNMYGKCGRIADARSLFESMDYRDIVSWNSLL 225
+EL + +H L+V GF DL + NMY KC ++ +AR +F+ M RD+VSWN+++
Sbjct: 152 AELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIV 211
Query: 226 SAYSKIGGIEEILQLVQGMRIEDIKPDKQTFCSALSASAIKGDLRFGKLVHGLILKDGLD 285
+ YS+ G L++V+ M E++KP T S L A + + GK +HG ++ G D
Sbjct: 212 AGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFD 271
Query: 286 IDQQVETALVVLYLRCRCLDLAHKVFESTTEKDVVLWTAMISGLVQNDCADKALGVFSQM 345
+ TALV +Y +C L+ A ++F+ E++VV W +MI VQN+ +A+ +F +M
Sbjct: 272 SLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKM 331
Query: 346 IESNVELSTATLASALAACAQLGCCDIGTSIHGYVLRQGIMLDIPAQNSLVTMYAKCNKL 405
++ V+ + ++ AL ACA LG + G IH + G+ ++ NSL++MY KC ++
Sbjct: 332 LDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEV 391
Query: 406 EQSCSIFNKMVEKDLVSWNAIVAGHAKNGYLSKAIFFFNEMRTSLQRPDSITVTSLLQAC 465
+ + S+F K+ + LVSWNA++ G A+NG A+ +F++MR+ +PD+ T S++ A
Sbjct: 392 DTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAI 451
Query: 466 GSAGALCQGKWIHNFVLRSSLIPCIMTETALVDMYFKCGNLEIAQKCFDYMLQQDLVTWS 525
KWIH V+RS L + TALVDMY KCG + IA+ FD M ++ + TW+
Sbjct: 452 AELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWN 511
Query: 526 ILIAGYGFNGKGEIALRKYSEFLGTGMEPNHVIFLSVLSACSHSGLISQGLSIYESMTKD 585
+I GYG +G G+ AL + E ++PN V FLSV+SACSHSGL+ GL + M ++
Sbjct: 512 AMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKEN 571
Query: 586 FRMPANLEHRACIIDLLSRAGKVDEAYSFYKMMFKEPSIDVLGILLDACRVNGSVELGKV 645
+ + +++H ++DLL RAG+++EA+ F M +P+++V G +L AC+++ +V +
Sbjct: 572 YSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFAEK 631
Query: 646 IARDMFELKPVDAGNFLQLVHSYASMSRWDGVEEAWTQMRSLGLKKLPGWSSIEVHGTSF 705
A +FEL P D G + L + Y + S W+ V + M GL+K PG S +E+
Sbjct: 632 AAERLFELNPDDGGYHVLLANIYRAASMWEKVGQVRVSMLRQGLRKTPGCSMVEIKNEVH 691
Query: 706 TFFSVHNSHPKIEDIILTVKSLSNDIRK----------MHVENEISDDFV 741
+FFS +HP + I ++ L I++ + VEN++ + +
Sbjct: 692 SFFSGSTAHPDSKKIYAFLEKLICHIKEAGYVPDTNLVLGVENDVKEQLL 738
BLAST of Lsi06G000580.1 vs. ExPASy Swiss-Prot
Match:
Q9C507 (Putative pentatricopeptide repeat-containing protein At1g69350, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-E66 PE=3 SV=1)
HSP 1 Score: 422.9 bits (1086), Expect = 7.3e-117
Identity = 233/703 (33.14%), Postives = 393/703 (55.90%), Query Frame = 0
Query: 34 LQTYISFQNTNTPPDAYTFPSLLKACT-NLNLFSNGLSIHQSVIVHGLSHDSYIGSSLIS 93
+ Y + T + FPS+L+AC + S G +H +I G+ D+ I +SL+
Sbjct: 85 IDLYHRLVSETTQISKFVFPSVLRACAGSREHLSVGGKVHGRIIKGGVDDDAVIETSLLC 144
Query: 94 FYAKFGCIQFGRKVFDTMPERNVVPWTTLIGCYSRQGDIDIAFSRFKQMRESGIQPTSVT 153
Y + G + KVFD MP R++V W+TL+ G++ A FK M + G++P +VT
Sbjct: 145 MYGQTGNLSDAEKVFDGMPVRDLVAWSTLVSSCLENGEVVKALRMFKCMVDDGVEPDAVT 204
Query: 154 FLSLLPGVSELPLL---LCLHCLIVLYGFESDLALSNSMVNMYGKCGRIADARSLFESMD 213
+S++ G +EL L +H I F+ D L NS++ MY KCG + + +FE +
Sbjct: 205 MISVVEGCAELGCLRIARSVHGQITRKMFDLDETLCNSLLTMYSKCGDLLSSERIFEKIA 264
Query: 214 YRDIVSWNSLLSAYSKIGGIEEILQLVQGMRIEDIKPDKQTFCSALSASAIKGDLRFGKL 273
++ VSW +++S+Y++ E+ L+ M I+P+ T S LS+ + G +R GK
Sbjct: 265 KKNAVSWTAMISSYNRGEFSEKALRSFSEMIKSGIEPNLVTLYSVLSSCGLIGLIREGKS 324
Query: 274 VHGLILKDGLDID-QQVETALVVLYLRCRCLDLAHKVFESTTEKDVVLWTAMISGLVQND 333
VHG ++ LD + + + ALV LY C L V +++++V W ++IS
Sbjct: 325 VHGFAVRRELDPNYESLSLALVELYAECGKLSDCETVLRVVSDRNIVAWNSLISLYAHRG 384
Query: 334 CADKALGVFSQMIESNVELSTATLASALAACAQLGCCDIGTSIHGYVLRQGIMLDIPAQN 393
+ALG+F QM+ ++ TLAS+++AC G +G IHG+V+R + D QN
Sbjct: 385 MVIQALGLFRQMVTQRIKPDAFTLASSISACENAGLVPLGKQIHGHVIRTDVS-DEFVQN 444
Query: 394 SLVTMYAKCNKLEQSCSIFNKMVEKDLVSWNAIVAGHAKNGYLSKAIFFFNEMRTSLQRP 453
SL+ MY+K ++ + ++FN++ + +V+WN+++ G ++NG +AI F+ M S
Sbjct: 445 SLIDMYSKSGSVDSASTVFNQIKHRSVVTWNSMLCGFSQNGNSVEAISLFDYMYHSYLEM 504
Query: 454 DSITVTSLLQACGSAGALCQGKWIHNFVLRSSLIPCIMTETALVDMYFKCGNLEIAQKCF 513
+ +T +++QAC S G+L +GKW+H+ ++ S L + T+TAL+DMY KCG+L A+ F
Sbjct: 505 NEVTFLAVIQACSSIGSLEKGKWVHHKLIISGL-KDLFTDTALIDMYAKCGDLNAAETVF 564
Query: 514 DYMLQQDLVTWSILIAGYGFNGKGEIALRKYSEFLGTGMEPNHVIFLSVLSACSHSGLIS 573
M + +V+WS +I YG +G+ A+ +++ + +G +PN V+F++VLSAC HSG +
Sbjct: 565 RAMSSRSIVSWSSMINAYGMHGRIGSAISTFNQMVESGTKPNEVVFMNVLSACGHSGSVE 624
Query: 574 QGLSIYESMTKDFRMPANLEHRACIIDLLSRAGKVDEAYSFYKMMFKEPSIDVLGILLDA 633
+G Y ++ K F + N EH AC IDLLSR+G + EAY K M V G L++
Sbjct: 625 EG-KYYFNLMKSFGVSPNSEHFACFIDLLSRSGDLKEAYRTIKEMPFLADASVWGSLVNG 684
Query: 634 CRVNGSVELGKVIARDMFELKPVDAGNFLQLVHSYASMSRWDGVEEAWTQMRSLGLKKLP 693
CR++ +++ K I D+ ++ D G + L + YA W+ + M+S LKK+P
Sbjct: 685 CRIHQKMDIIKAIKNDLSDIVTDDTGYYTLLSNIYAEEGEWEEFRRLRSAMKSSNLKKVP 744
Query: 694 GWSSIEVHGTSFTFFSVHNSHPKIEDIILTVKSLSNDIRKMHV 732
G+S+IE+ F F + + + ++I + +L N + HV
Sbjct: 745 GYSAIEIDQKVFRFGAGEENRIQTDEIYRFLGNLQNLTNEEHV 784
BLAST of Lsi06G000580.1 vs. ExPASy Swiss-Prot
Match:
Q9STE1 (Pentatricopeptide repeat-containing protein At4g21300 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E36 PE=3 SV=1)
HSP 1 Score: 419.5 bits (1077), Expect = 8.1e-116
Identity = 227/723 (31.40%), Postives = 398/723 (55.05%), Query Frame = 0
Query: 9 IAHGSTKSFNSLINRLSSQGAHHQVLQTYISFQNTNTPPDAYTFPSLLKACTNLNLFSNG 68
+ S + +NS+I+ G +Q L Y PD TFP L+KAC L F
Sbjct: 98 LRRSSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFKGI 157
Query: 69 LSIHQSVIVHGLSHDSYIGSSLISFYAKFGCIQFGRKVFDTMPERNVVPWTTLIGCYSRQ 128
+ +V G+ + ++ SSLI Y ++G I K+FD + +++ V W ++ Y++
Sbjct: 158 DFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKC 217
Query: 129 GDIDIAFSRFKQMRESGIQPTSVTF---LSLLPGVSELPLLLCLHCLIVLYGFESDLALS 188
G +D F MR I P +VTF LS+ + L + LH L+V+ G + + ++
Sbjct: 218 GALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIK 277
Query: 189 NSMVNMYGKCGRIADARSLFESMDYRDIVSWNSLLSAYSKIGGIEEILQLVQGMRIEDIK 248
NS+++MY KCGR DA LF M D V+WN ++S Y + G +EE L M +
Sbjct: 278 NSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVL 337
Query: 249 PDKQTFCSALSASAIKGDLRFGKLVHGLILKDGLDIDQQVETALVVLYLRCRCLDLAHKV 308
PD TF S L + + +L + K +H I++ + +D + +AL+ Y +CR + +A +
Sbjct: 338 PDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNI 397
Query: 309 FESTTEKDVVLWTAMISGLVQNDCADKALGVFSQMIESNVELSTATLASALAACAQLGCC 368
F DVV++TAMISG + N +L +F +++ + + TL S L L
Sbjct: 398 FSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLAL 457
Query: 369 DIGTSIHGYVLRQGIMLDIPAQNSLVTMYAKCNKLEQSCSIFNKMVEKDLVSWNAIVAGH 428
+G +HG+++++G +++ MYAKC ++ + IF ++ ++D+VSWN+++
Sbjct: 458 KLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIVSWNSMITRC 517
Query: 429 AKNGYLSKAIFFFNEMRTSLQRPDSITVTSLLQACGSAGALCQGKWIHNFVLRSSLIPCI 488
A++ S AI F +M S D +++++ L AC + + GK IH F+++ SL +
Sbjct: 518 AQSDNPSAAIDIFRQMGVSGICYDCVSISAALSACANLPSESFGKAIHGFMIKHSLASDV 577
Query: 489 MTETALVDMYFKCGNLEIAQKCFDYMLQQDLVTWSILIAGYGFNGKGEIALRKYSEFL-G 548
+E+ L+DMY KCGNL+ A F M ++++V+W+ +IA G +GK + +L + E +
Sbjct: 578 YSESTLIDMYAKCGNLKAAMNVFKTMKEKNIVSWNSIIAACGNHGKLKDSLCLFHEMVEK 637
Query: 549 TGMEPNHVIFLSVLSACSHSGLISQGLSIYESMTKDFRMPANLEHRACIIDLLSRAGKVD 608
+G+ P+ + FL ++S+C H G + +G+ + SMT+D+ + EH AC++DL RAG++
Sbjct: 638 SGIRPDQITFLEIISSCCHVGDVDEGVRFFRSMTEDYGIQPQQEHYACVVDLFGRAGRLT 697
Query: 609 EAYSFYKMMFKEPSIDVLGILLDACRVNGSVELGKVIARDMFELKPVDAGNFLQLVHSYA 668
EAY K M P V G LL ACR++ +VEL +V + + +L P ++G ++ + +++A
Sbjct: 698 EAYETVKSMPFPPDAGVWGTLLGACRLHKNVELAEVASSKLMDLDPSNSGYYVLISNAHA 757
Query: 669 SMSRWDGVEEAWTQMRSLGLKKLPGWSSIEVHGTSFTFFSVHNSHPKIEDIILTVKSLSN 728
+ W+ V + + M+ ++K+PG+S IE++ + F S +HP+ I + SL
Sbjct: 758 NAREWESVTKVRSLMKEREVQKIPGYSWIEINKRTHLFVSGDVNHPESSHIYSLLNSLLG 817
BLAST of Lsi06G000580.1 vs. ExPASy Swiss-Prot
Match:
Q7Y211 (Pentatricopeptide repeat-containing protein At3g57430, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H81 PE=2 SV=2)
HSP 1 Score: 417.2 bits (1071), Expect = 4.0e-115
Identity = 238/718 (33.15%), Postives = 409/718 (56.96%), Query Frame = 0
Query: 32 QVLQTYISFQNTNTPPDAYTFPSLLKACTNLNLFSNGLSIHQSVIVHGLSHDSY-IGSSL 91
+ + TY+ PD Y FP+LLKA +L G IH V G DS + ++L
Sbjct: 80 EAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTL 139
Query: 92 ISFYAKFGCIQFGRKVFDTMPERNVVPWTTLIGCYSRQGDIDIAFSRFKQMRESGIQPTS 151
++ Y K G KVFD + ERN V W +LI ++A F+ M + ++P+S
Sbjct: 140 VNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSS 199
Query: 152 VTFLSLLPGVSELPLL--LCLHCLIVLYGF---ESDLALSNSMVNMYGKCGRIADARSLF 211
T +S++ S LP+ L + + YG E + + N++V MYGK G++A ++ L
Sbjct: 200 FTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGELNSFIINTLVAMYGKLGKLASSKVLL 259
Query: 212 ESMDYRDIVSWNSLLSAYSKIGGIEEILQLVQGMRIEDIKPDKQTFCSALSASAIKGDLR 271
S RD+V+WN++LS+ + + E L+ ++ M +E ++PD+ T S L A + LR
Sbjct: 260 GSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLR 319
Query: 272 FGKLVHGLILKDG-LDIDQQVETALVVLYLRCRCLDLAHKVFESTTEKDVVLWTAMISGL 331
GK +H LK+G LD + V +ALV +Y C+ + +VF+ ++ + LW AMI+G
Sbjct: 320 TGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGY 379
Query: 332 VQNDCADKALGVFSQMIES-NVELSTATLASALAACAQLGCCDIGTSIHGYVLRQGIMLD 391
QN+ +AL +F M ES + ++ T+A + AC + G +IHG+V+++G+ D
Sbjct: 380 SQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRD 439
Query: 392 IPAQNSLVTMYAKCNKLEQSCSIFNKMVEKDLVSWNAIVAGHAKNGYLSKAIFFFNEM-- 451
QN+L+ MY++ K++ + IF KM ++DLV+WN ++ G+ + + A+ ++M
Sbjct: 440 RFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQN 499
Query: 452 ----------RTSLQRPDSITVTSLLQACGSAGALCQGKWIHNFVLRSSLIPCIMTETAL 511
R SL +P+SIT+ ++L +C + AL +GK IH + ++++L + +AL
Sbjct: 500 LERKVSKGASRVSL-KPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSAL 559
Query: 512 VDMYFKCGNLEIAQKCFDYMLQQDLVTWSILIAGYGFNGKGEIALRKYSEFLGTGMEPNH 571
VDMY KCG L++++K FD + Q++++TW+++I YG +G G+ A+ + G++PN
Sbjct: 560 VDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNE 619
Query: 572 VIFLSVLSACSHSGLISQGLSIYESMTKDFRMPANLEHRACIIDLLSRAGKVDEAYSFYK 631
V F+SV +ACSHSG++ +GL I+ M D+ + + +H AC++DLL RAG++ EAY
Sbjct: 620 VTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMN 679
Query: 632 MMFKE-PSIDVLGILLDACRVNGSVELGKVIARDMFELKPVDAGNFLQLVHSYASMSRWD 691
MM ++ LL A R++ ++E+G++ A+++ +L+P A +++ L + Y+S WD
Sbjct: 680 MMPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGLWD 739
Query: 692 GVEEAWTQMRSLGLKKLPGWSSIEVHGTSFTFFSVHNSHPKIEDIILTVKSLSNDIRK 729
E M+ G++K PG S IE F + +SHP+ E + +++L +RK
Sbjct: 740 KATEVRRNMKEQGVRKEPGCSWIEHGDEVHKFVAGDSSHPQSEKLSGYLETLWERMRK 796
BLAST of Lsi06G000580.1 vs. ExPASy TrEMBL
Match:
A0A1S4DUX5 (pentatricopeptide repeat-containing protein At4g04370 OS=Cucumis melo OX=3656 GN=LOC103487188 PE=4 SV=1)
HSP 1 Score: 1346.6 bits (3484), Expect = 0.0e+00
Identity = 662/741 (89.34%), Postives = 703/741 (94.87%), Query Frame = 0
Query: 1 MNRLIHEPIAHGSTKSFNSLINRLSSQGAHHQVLQTYISFQNTNTPPDAYTFPSLLKACT 60
M+RLIHE IAHGSTKSFNSL++RLSSQGAHHQVLQTYIS Q T+TP DAYTFPSL KACT
Sbjct: 1 MSRLIHESIAHGSTKSFNSLVSRLSSQGAHHQVLQTYISMQKTHTPSDAYTFPSLFKACT 60
Query: 61 NLNLFSNGLSIHQSVIVHGLSHDSYIGSSLISFYAKFGCIQFGRKVFDTMPERNVVPWTT 120
NLNLFS+GLS+HQSV+V+GLSHDSYIGSSLISFYAKFGCI GRKVFDTM +RNVVPWTT
Sbjct: 61 NLNLFSHGLSLHQSVVVNGLSHDSYIGSSLISFYAKFGCIHLGRKVFDTMLKRNVVPWTT 120
Query: 121 LIGCYSRQGDIDIAFSRFKQMRESGIQPTSVTFLSLLPGVSELPLLLCLHCLIVLYGFES 180
+IG YSR+GDIDIAFS FKQMRESGIQPTSVT LSLLPG+S+LPLLLCLHCLI LYGFES
Sbjct: 121 IIGSYSREGDIDIAFSMFKQMRESGIQPTSVTLLSLLPGISKLPLLLCLHCLIFLYGFES 180
Query: 181 DLALSNSMVNMYGKCGRIADARSLFESMDYRDIVSWNSLLSAYSKIGGIEEILQLVQGMR 240
DLALSNSMVNMYGKCGRIADARSLFES+DYRDIVSWNSLLSAYSKIG EEILQLVQ M+
Sbjct: 181 DLALSNSMVNMYGKCGRIADARSLFESIDYRDIVSWNSLLSAYSKIGATEEILQLVQAMK 240
Query: 241 IEDIKPDKQTFCSALSASAIKGDLRFGKLVHGLILKDGLDIDQQVETALVVLYLRCRCLD 300
IEDIKPDKQTFCSALSASAIKGDLR GKLVHGL+LKDGL+IDQ VE+ALVVLYLRCRCLD
Sbjct: 241 IEDIKPDKQTFCSALSASAIKGDLRLGKLVHGLMLKDGLNIDQHVESALVVLYLRCRCLD 300
Query: 301 LAHKVFESTTEKDVVLWTAMISGLVQNDCADKALGVFSQMIESNVELSTATLASALAACA 360
LAHKVF+STTEKDVV+WTAMISGLVQNDCADKALGVF QMIESNV+ STATLASALAACA
Sbjct: 301 LAHKVFKSTTEKDVVMWTAMISGLVQNDCADKALGVFYQMIESNVQPSTATLASALAACA 360
Query: 361 QLGCCDIGTSIHGYVLRQGIMLDIPAQNSLVTMYAKCNKLEQSCSIFNKMVEKDLVSWNA 420
QLGCCDIG SIHGYVLRQGIMLDIPAQNSLVTMYAKCNKL+QSCSIFNKMVEKD+VSWNA
Sbjct: 361 QLGCCDIGASIHGYVLRQGIMLDIPAQNSLVTMYAKCNKLQQSCSIFNKMVEKDVVSWNA 420
Query: 421 IVAGHAKNGYLSKAIFFFNEMRTSLQRPDSITVTSLLQACGSAGALCQGKWIHNFVLRSS 480
IVAG+AKNGYLSKAIFFFNEMRTS QRPDSITVTSLLQACGSAGALCQGKWIHNFVLRSS
Sbjct: 421 IVAGNAKNGYLSKAIFFFNEMRTSFQRPDSITVTSLLQACGSAGALCQGKWIHNFVLRSS 480
Query: 481 LIPCIMTETALVDMYFKCGNLEIAQKCFDYMLQQDLVTWSILIAGYGFNGKGEIALRKYS 540
LIPCIMTETALVDMYFKCGNLE AQKCFD M Q+DLV WS LI GYGFNGKGEIALRKYS
Sbjct: 481 LIPCIMTETALVDMYFKCGNLENAQKCFDCMSQRDLVAWSTLIVGYGFNGKGEIALRKYS 540
Query: 541 EFLGTGMEPNHVIFLSVLSACSHSGLISQGLSIYESMTKDFRMPANLEHRACIIDLLSRA 600
EFLGTGMEPNHVIF+SVLSACSHSGLISQGLSIYESMTKDFRMP NLEHRACI+DLLSRA
Sbjct: 541 EFLGTGMEPNHVIFISVLSACSHSGLISQGLSIYESMTKDFRMPPNLEHRACIVDLLSRA 600
Query: 601 GKVDEAYSFYKMMFKEPSIDVLGILLDACRVNGSVELGKVIARDMFELKPVDAGNFLQLV 660
GKVDEAYSFYKMMFKEPS+ VLG LLDACRVNGSVELGKVIARDMFELKPVD GNF+QL
Sbjct: 601 GKVDEAYSFYKMMFKEPSMVVLGTLLDACRVNGSVELGKVIARDMFELKPVDPGNFVQLA 660
Query: 661 HSYASMSRWDGVEEAWTQMRSLGLKKLPGWSSIEVHGTSFTFFSVHNSHPKIEDIILTVK 720
+SYASM+RWDGVE+AWTQMRSLGLKK PGWSSIE+HGT+FTFF+ HNSHPKIE IILTVK
Sbjct: 661 NSYASMNRWDGVEKAWTQMRSLGLKKFPGWSSIELHGTTFTFFAAHNSHPKIEKIILTVK 720
Query: 721 SLSNDIRKMHVENEISDDFVE 742
+LS DIR ++++NEI +DFVE
Sbjct: 721 ALSKDIRNLYIKNEICEDFVE 741
BLAST of Lsi06G000580.1 vs. ExPASy TrEMBL
Match:
A0A0A0M0F8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G650050 PE=4 SV=1)
HSP 1 Score: 1313.1 bits (3397), Expect = 0.0e+00
Identity = 648/743 (87.21%), Postives = 692/743 (93.14%), Query Frame = 0
Query: 1 MNRLIHEPIAHGSTKSFNSLINRLSSQGAHHQVLQTYISFQNTNTPPDAYTFPSLLKACT 60
M+ IHE IAHG TKSFNSL++RLS QGAHHQVLQTYIS Q T+T DAYTFPSL KACT
Sbjct: 1 MSGFIHESIAHGCTKSFNSLVSRLSYQGAHHQVLQTYISMQKTHTQLDAYTFPSLFKACT 60
Query: 61 NLNLFSNGLSIHQSVIVHGLSHDSYIGSSLISFYAKFGCIQFGRKVFDTMPERNVVPWTT 120
NLNLFS+GLS+HQSV+V+GLSHDSYIGSSLISFYAKFGCI GRKVFDTM +RNVVPWTT
Sbjct: 61 NLNLFSHGLSLHQSVVVNGLSHDSYIGSSLISFYAKFGCIHLGRKVFDTMLKRNVVPWTT 120
Query: 121 LIGCYSRQGDIDIAFSRFKQMRESGIQPTSVTFLSLLPGVSELPLLLCLHCLIVLYGFES 180
+IG YSR+GDIDIAFS FKQMRESGIQPTSVT LSLLPG+S+LPLLLCLHCLI+L+GFES
Sbjct: 121 IIGSYSREGDIDIAFSMFKQMRESGIQPTSVTLLSLLPGISKLPLLLCLHCLIILHGFES 180
Query: 181 DLALSNSMVNMYGKCGRIADARSLFESMDYRDIVSWNSLLSAYSKIGGIEEILQLVQGMR 240
DLALSNSMVNMYGKCGRIADAR LF+S+D RDIVSWNSLLSAYSKIG EEILQL+Q M+
Sbjct: 181 DLALSNSMVNMYGKCGRIADARRLFQSIDCRDIVSWNSLLSAYSKIGATEEILQLLQAMK 240
Query: 241 IEDIKPDKQTFCSALSASAIKGDLRFGKLVHGLILKDGLDIDQQVETALVVLYLRCRCLD 300
IEDIKPDKQTFCSALSASAIKGDLR GKLVHGL+LKDGL+IDQ VE+ALVVLYLRCRCLD
Sbjct: 241 IEDIKPDKQTFCSALSASAIKGDLRLGKLVHGLMLKDGLNIDQHVESALVVLYLRCRCLD 300
Query: 301 LAHKVFESTTEKDVVLWTAMISGLVQNDCADKALGVFSQMIESNVELSTATLASALAACA 360
A+KVF+STTEKDVV+WTAMISGLVQNDCADKALGVF QMIESNV+ STATLAS LAACA
Sbjct: 301 PAYKVFKSTTEKDVVMWTAMISGLVQNDCADKALGVFYQMIESNVKPSTATLASGLAACA 360
Query: 361 QLGCCDIGTSIHGYVLRQGIMLDIPAQNSLVTMYAKCNKLEQSCSIFNKMVEKDLVSWNA 420
QLGCCDIG SIHGYVLRQGIMLDIPAQNSLVTMYAKCNKL+QSCSIFNKMVEKDLVSWNA
Sbjct: 361 QLGCCDIGASIHGYVLRQGIMLDIPAQNSLVTMYAKCNKLQQSCSIFNKMVEKDLVSWNA 420
Query: 421 IVAGHAKNGYLSKAIFFFNEMRTSLQRPDSITVTSLLQACGSAGALCQGKWIHNFVLRSS 480
IVAGHAKNGYLSK IFFFNEMR S RPDSITVTSLLQACGSAGALCQGKWIHNFVLRSS
Sbjct: 421 IVAGHAKNGYLSKGIFFFNEMRKSFLRPDSITVTSLLQACGSAGALCQGKWIHNFVLRSS 480
Query: 481 LIPCIMTETALVDMYFKCGNLEIAQKCFDYMLQQDLVTWSILIAGYGFNGKGEIALRKYS 540
LIPCIMTETALVDMYFKCGNLE AQKCFD MLQ+DLV WS LI GYGFNGKGEIALRKYS
Sbjct: 481 LIPCIMTETALVDMYFKCGNLENAQKCFDCMLQRDLVAWSTLIVGYGFNGKGEIALRKYS 540
Query: 541 EFLGTGMEPNHVIFLSVLSACSHSGLISQGLSIYESMTKDFRMPANLEHRACIIDLLSRA 600
EFLGTGMEPNHVIF+SVLSACSH GLIS+GLSIYESMTKDFRM NLEHRAC++DLLSRA
Sbjct: 541 EFLGTGMEPNHVIFISVLSACSHGGLISKGLSIYESMTKDFRMSPNLEHRACVVDLLSRA 600
Query: 601 GKVDEAYSFYKMMFKEPSIDVLGILLDACRVNGSVELGKVIARDMFELKPVDAGNFLQLV 660
GKVDEAYSFYKMMFKEPSI VLG+LLDACRVNG VELGKVIARDMFELKPVD GNF+QL
Sbjct: 601 GKVDEAYSFYKMMFKEPSIVVLGMLLDACRVNGRVELGKVIARDMFELKPVDPGNFVQLA 660
Query: 661 HSYASMSRWDGVEEAWTQMRSLGLKKLPGWSSIEVHGTSFTFFSVHNSHPKIEDIILTVK 720
+SYASMSRWDGVE+AWTQMRSLGLKK PGWSSIEVHGT+FTFF+ HNSHPKIE IILTVK
Sbjct: 661 NSYASMSRWDGVEKAWTQMRSLGLKKYPGWSSIEVHGTTFTFFASHNSHPKIEKIILTVK 720
Query: 721 SLSNDIRKMHVENEISDDFVEIS 744
+LS +IR ++V+NEI +DFVE S
Sbjct: 721 ALSKNIRNLYVKNEICEDFVEYS 743
BLAST of Lsi06G000580.1 vs. ExPASy TrEMBL
Match:
A0A6J1E522 (pentatricopeptide repeat-containing protein At4g04370 OS=Momordica charantia OX=3673 GN=LOC111026115 PE=4 SV=1)
HSP 1 Score: 1299.6 bits (3362), Expect = 0.0e+00
Identity = 639/746 (85.66%), Postives = 689/746 (92.36%), Query Frame = 0
Query: 1 MNRLIH-------EPIAHGSTKSFNSLINRLSSQGAHHQVLQTYISFQNTNTPPDAYTFP 60
MNRLIH PIA+GSTKSFNS+INRLSSQGAHHQVLQTY S Q T+TPPDAYTFP
Sbjct: 1 MNRLIHGLKPPCPPPIANGSTKSFNSIINRLSSQGAHHQVLQTYASMQKTSTPPDAYTFP 60
Query: 61 SLLKACTNLNLFSNGLSIHQSVIVHGLSHDSYIGSSLISFYAKFGCIQFGRKVFDTMPER 120
SLLKACT LNLF +GLS+HQS+IV+G S DSYIGSSLISFYAKFGCI GRKVFD MPER
Sbjct: 61 SLLKACTILNLFLDGLSLHQSIIVNGFSLDSYIGSSLISFYAKFGCIDIGRKVFDIMPER 120
Query: 121 NVVPWTTLIGCYSRQGDIDIAFSRFKQMRESGIQPTSVTFLSLLPGVSELPLLLCLHCLI 180
NVVPWTT+IGCYSR+G+ID+AFS FKQMR +GIQPTSVT LSLLP +SELPLL CLHC I
Sbjct: 121 NVVPWTTIIGCYSREGEIDVAFSMFKQMRATGIQPTSVTLLSLLPSISELPLLQCLHCWI 180
Query: 181 VLYGFESDLALSNSMVNMYGKCGRIADARSLFESMDYRDIVSWNSLLSAYSKIGGIEEIL 240
+LYGFES+L+LSNSMVN+YG+CG I DARSLFESMDYRDIVSWNSLLSAYSKIG IEEIL
Sbjct: 181 ILYGFESNLSLSNSMVNVYGRCGSIEDARSLFESMDYRDIVSWNSLLSAYSKIGVIEEIL 240
Query: 241 QLVQGMRIEDIKPDKQTFCSALSASAIKGDLRFGKLVHGLILKDGLDIDQQVETALVVLY 300
QLV GMR EDIKPDKQTFCSALSASAIKGD+R GKLVHGLI+KDGL IDQQVETAL+VLY
Sbjct: 241 QLVLGMRTEDIKPDKQTFCSALSASAIKGDIRLGKLVHGLIIKDGLGIDQQVETALMVLY 300
Query: 301 LRCRCLDLAHKVFESTTEKDVVLWTAMISGLVQNDCADKALGVFSQMIESNVELSTATLA 360
LRC+ LDLA KVF+STTEKD+VLWTAMISGLVQNDCADKAL VF QM+ESN+E TATLA
Sbjct: 301 LRCKSLDLALKVFKSTTEKDMVLWTAMISGLVQNDCADKALRVFYQMLESNMEPGTATLA 360
Query: 361 SALAACAQLGCCDIGTSIHGYVLRQGIMLDIPAQNSLVTMYAKCNKLEQSCSIFNKMVEK 420
SALAACAQLGC DIGT IHGY+LRQGIMLDIPAQN+LVTMYAKCN+LEQSC IFNKMVE+
Sbjct: 361 SALAACAQLGCYDIGTLIHGYILRQGIMLDIPAQNALVTMYAKCNRLEQSCGIFNKMVER 420
Query: 421 DLVSWNAIVAGHAKNGYLSKAIFFFNEMRTSLQRPDSITVTSLLQACGSAGALCQGKWIH 480
DLVSWNAIVAGHAKNGYLSKAI FFNEMRTSLQRPDSITVTSLLQACGSAGAL QGKWIH
Sbjct: 421 DLVSWNAIVAGHAKNGYLSKAILFFNEMRTSLQRPDSITVTSLLQACGSAGALWQGKWIH 480
Query: 481 NFVLRSSLIPCIMTETALVDMYFKCGNLEIAQKCFDYMLQQDLVTWSILIAGYGFNGKGE 540
NFV RSSL+PCIM ETAL+DMYFKCGNLEIAQKCFDYM QDLVTWS LI+GYGFNG GE
Sbjct: 481 NFVFRSSLMPCIMIETALIDMYFKCGNLEIAQKCFDYMPHQDLVTWSTLISGYGFNGNGE 540
Query: 541 IALRKYSEFLGTGMEPNHVIFLSVLSACSHSGLISQGLSIYESMTKDFRMPANLEHRACI 600
IALRKYSEFLGTG+EPNHVIFLSVLSACSHSGL++QGL IYESMT+DF MP NLEHRACI
Sbjct: 541 IALRKYSEFLGTGLEPNHVIFLSVLSACSHSGLVNQGLRIYESMTRDFLMPPNLEHRACI 600
Query: 601 IDLLSRAGKVDEAYSFYKMMFKEPSIDVLGILLDACRVNGSVELGKVIARDMFELKPVDA 660
+DLLSRAGKV+EAYSFYKMMF+EPSIDVLGILLDACRVNGSVELG+ IARD+F LKPVD
Sbjct: 601 VDLLSRAGKVEEAYSFYKMMFQEPSIDVLGILLDACRVNGSVELGEAIARDIFALKPVDP 660
Query: 661 GNFLQLVHSYASMSRWDGVEEAWTQMRSLGLKKLPGWSSIEVHGTSFTFFSVHNSHPKIE 720
GN++QL HSYASM RWDGVEEAWTQMRSLGLKKLPGWSSIEVHGTSF+F+SVHNSHPKIE
Sbjct: 661 GNYVQLAHSYASMGRWDGVEEAWTQMRSLGLKKLPGWSSIEVHGTSFSFYSVHNSHPKIE 720
Query: 721 DIILTVKSLSNDIRKMHVENEISDDF 740
+I+LTVKSLSNDIRKMH+ENEI+ DF
Sbjct: 721 EIMLTVKSLSNDIRKMHIENEINKDF 746
BLAST of Lsi06G000580.1 vs. ExPASy TrEMBL
Match:
A0A6J1EZ22 (pentatricopeptide repeat-containing protein At4g04370 OS=Cucurbita moschata OX=3662 GN=LOC111437743 PE=4 SV=1)
HSP 1 Score: 1280.8 bits (3313), Expect = 0.0e+00
Identity = 635/739 (85.93%), Postives = 677/739 (91.61%), Query Frame = 0
Query: 1 MNRLIHEPIAHGSTKSFNSLINRLSSQGAHHQVLQTYISFQNTNTPPDAYTFPSLLKACT 60
MNRLIHE I HGSTKSFN+LINRLSSQ AHHQVLQTYIS NTNTPPDAYTFPSLLKACT
Sbjct: 1 MNRLIHESITHGSTKSFNALINRLSSQAAHHQVLQTYISMLNTNTPPDAYTFPSLLKACT 60
Query: 61 NLNLFSNGLSIHQSVIVHGLSHDSYIGSSLISFYAKFGCIQFGRKVFDTMPERNVVPWTT 120
LN FSNGLSIHQSVIV+GLSHDSYIGSSLISFYAKFGCI GRKVFDTMPERNVVPWT
Sbjct: 61 LLNSFSNGLSIHQSVIVNGLSHDSYIGSSLISFYAKFGCIHLGRKVFDTMPERNVVPWTA 120
Query: 121 LIGCYSRQGDIDIAFSRFKQMRESGIQPTSVTFLSLLPGVSELPLLLCLHCLIVLYGFES 180
+IGCYSRQGD+ IAF+ FKQMRE+ I PTSVTFLSLLPG+SELPLL LHCLIVLYGF S
Sbjct: 121 IIGCYSRQGDVGIAFTMFKQMRENEIHPTSVTFLSLLPGISELPLLQGLHCLIVLYGFGS 180
Query: 181 DLALSNSMVNMYGKCGRIADARSLFESMDYRDIVSWNSLLSAYSKIGGIEEILQLVQGMR 240
DLALSNSMV+MYG+CG + A SLFESMD RDIVSWNSLLSAYSKI GIEEILQLV MR
Sbjct: 181 DLALSNSMVSMYGRCGSVDYATSLFESMDSRDIVSWNSLLSAYSKIVGIEEILQLVHSMR 240
Query: 241 IEDIKPDKQTFCSALSASAIKGDLRFGKLVHGLILKDGLDIDQQVETALVVLYLRCRCLD 300
IE IKPDK+TFCS LSASA K D+R GKLVHGL+LK GLD+DQQVET LVVLYL+C CLD
Sbjct: 241 IEGIKPDKRTFCSVLSASATKCDIRLGKLVHGLVLKHGLDMDQQVETTLVVLYLKCSCLD 300
Query: 301 LAHKVFESTTEKDVVLWTAMISGLVQNDCADKALGVFSQMIESNVELSTATLASALAACA 360
A KVFEST EKDVVLWTAMISGLVQNDC+D AL VF M+ESNVEL TATLAS LAACA
Sbjct: 301 FALKVFESTIEKDVVLWTAMISGLVQNDCSDNALEVFYHMVESNVELGTATLASILAACA 360
Query: 361 QLGCCDIGTSIHGYVLRQGIMLDIPAQNSLVTMYAKCNKLEQSCSIFNKMVEKDLVSWNA 420
QLGC IGTSIHGY+LRQGIM DIPAQNSLVTMYAKCN+LEQSC+IFNK+VEK+LVSWNA
Sbjct: 361 QLGCYHIGTSIHGYILRQGIMFDIPAQNSLVTMYAKCNRLEQSCAIFNKIVEKNLVSWNA 420
Query: 421 IVAGHAKNGYLSKAIFFFNEMR-TSLQRPDSITVTSLLQACGSAGALCQGKWIHNFVLRS 480
I+AGHAKNGYLSKAIFFF+EMR TS QRPDSITVTSLLQACGSAGALCQGKWIH+F+ RS
Sbjct: 421 IIAGHAKNGYLSKAIFFFSEMRATSFQRPDSITVTSLLQACGSAGALCQGKWIHDFIFRS 480
Query: 481 SLIPCIMTETALVDMYFKCGNLEIAQKCFDYMLQQDLVTWSILIAGYGFNGKGEIALRKY 540
SLIPCIMTETALVDMYFKCG++E AQKCFDYMLQ+DLVTWS LIAGYGFNG+GEIALRKY
Sbjct: 481 SLIPCIMTETALVDMYFKCGDVENAQKCFDYMLQKDLVTWSTLIAGYGFNGQGEIALRKY 540
Query: 541 SEFLGTGMEPNHVIFLSVLSACSHSGLISQGLSIYESMTKDFRMPANLEHRACIIDLLSR 600
SEFLGTGMEPNHVIFLSVLSACSHSGLI+QGLSIYESMTKDF MP NLEHRACIIDLLSR
Sbjct: 541 SEFLGTGMEPNHVIFLSVLSACSHSGLINQGLSIYESMTKDFSMPTNLEHRACIIDLLSR 600
Query: 601 AGKVDEAYSFYKMMFKEPSIDVLGILLDACRVNGSVELGKVIARDMFELKPVDAGNFLQL 660
AGKV+EAYSFY MF+EPSIDVLGILLDACRVNG+VELG+VI+RDMFELKPVDAGN++QL
Sbjct: 601 AGKVEEAYSFYNRMFEEPSIDVLGILLDACRVNGNVELGEVISRDMFELKPVDAGNYVQL 660
Query: 661 VHSYASMSRWDGVEEAWTQMRSLGLKKLPGWSSIEVHGTSFTFFSVHNSHPKIEDIILTV 720
HSYAS SRWDGVE AWTQMRSLGLKKLPGWS IEV GTSFTFFSVHNSHPKIE+I+ TV
Sbjct: 661 AHSYASTSRWDGVEVAWTQMRSLGLKKLPGWSCIEVDGTSFTFFSVHNSHPKIEEIVWTV 720
Query: 721 KSLSNDIRKMHVENEISDD 739
KSLS DIRKMH+E+EIS D
Sbjct: 721 KSLSKDIRKMHIESEISPD 739
BLAST of Lsi06G000580.1 vs. ExPASy TrEMBL
Match:
A0A5D3CX33 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1610G00070 PE=4 SV=1)
HSP 1 Score: 1278.1 bits (3306), Expect = 0.0e+00
Identity = 627/701 (89.44%), Postives = 665/701 (94.86%), Query Frame = 0
Query: 41 QNTNTPPDAYTFPSLLKACTNLNLFSNGLSIHQSVIVHGLSHDSYIGSSLISFYAKFGCI 100
Q T+TP DAYTFPSL KACTNLNLFS+GLS+HQSV+V+GLSHDSYIGSSLISFYAKFGCI
Sbjct: 2 QKTHTPSDAYTFPSLFKACTNLNLFSHGLSLHQSVVVNGLSHDSYIGSSLISFYAKFGCI 61
Query: 101 QFGRKVFDTMPERNVVPWTTLIGCYSRQGDIDIAFSRFKQMRESGIQPTSVTFLSLLPGV 160
GRKVFDTM +RNVVPWTT+IG YSR+GDIDIAFS FKQMRESGIQPTSVT LSLLPG+
Sbjct: 62 HLGRKVFDTMLKRNVVPWTTIIGSYSREGDIDIAFSMFKQMRESGIQPTSVTLLSLLPGI 121
Query: 161 SELPLLLCLHCLIVLYGFESDLALSNSMVNMYGKCGRIADARSLFESMDYRDIVSWNSLL 220
S+LPLLLCLHCLI LYGFESDLALSNSMVNMYGKCGRIADARSLFES+DYRDIVSWNSLL
Sbjct: 122 SKLPLLLCLHCLIFLYGFESDLALSNSMVNMYGKCGRIADARSLFESIDYRDIVSWNSLL 181
Query: 221 SAYSKIGGIEEILQLVQGMRIEDIKPDKQTFCSALSASAIKGDLRFGKLVHGLILKDGLD 280
SAYSKIG EEILQLVQ M+IEDIKPDKQTFCSALSASAIKGDLR GKLVHGL+LKDGL+
Sbjct: 182 SAYSKIGATEEILQLVQAMKIEDIKPDKQTFCSALSASAIKGDLRLGKLVHGLMLKDGLN 241
Query: 281 IDQQVETALVVLYLRCRCLDLAHKVFESTTEKDVVLWTAMISGLVQNDCADKALGVFSQM 340
IDQ VE+ALVVLYLRCRCLDLAHKVF+STTEKDVV+WTAMISGLVQNDCADKALGVF QM
Sbjct: 242 IDQHVESALVVLYLRCRCLDLAHKVFKSTTEKDVVMWTAMISGLVQNDCADKALGVFYQM 301
Query: 341 IESNVELSTATLASALAACAQLGCCDIGTSIHGYVLRQGIMLDIPAQNSLVTMYAKCNKL 400
IESNV+ STATLASALAACAQLGCCDIG SIHGYVLRQGIMLDIPAQNSLVTMYAKCNKL
Sbjct: 302 IESNVQPSTATLASALAACAQLGCCDIGASIHGYVLRQGIMLDIPAQNSLVTMYAKCNKL 361
Query: 401 EQSCSIFNKMVEKDLVSWNAIVAGHAKNGYLSKAIFFFNEMRTSLQRPDSITVTSLLQAC 460
+QSCSIFNKMVEKD+VSWNAIVAG+AKNGYLSKAIFFFNEMRTS QRPDSITVTSLLQAC
Sbjct: 362 QQSCSIFNKMVEKDVVSWNAIVAGNAKNGYLSKAIFFFNEMRTSFQRPDSITVTSLLQAC 421
Query: 461 GSAGALCQGKWIHNFVLRSSLIPCIMTETALVDMYFKCGNLEIAQKCFDYMLQQDLVTWS 520
GSAGALCQGKWIHNFVLRSSLIPCIMTETALVDMYFKCGNLE AQKCFD M Q+DLV WS
Sbjct: 422 GSAGALCQGKWIHNFVLRSSLIPCIMTETALVDMYFKCGNLENAQKCFDCMSQRDLVAWS 481
Query: 521 ILIAGYGFNGKGEIALRKYSEFLGTGMEPNHVIFLSVLSACSHSGLISQGLSIYESMTKD 580
LI GYGFNGKGEIALRKYSEFLGTGMEPNHVIF+SVLSACSHSGLISQGLSIYESMTKD
Sbjct: 482 TLIVGYGFNGKGEIALRKYSEFLGTGMEPNHVIFISVLSACSHSGLISQGLSIYESMTKD 541
Query: 581 FRMPANLEHRACIIDLLSRAGKVDEAYSFYKMMFKEPSIDVLGILLDACRVNGSVELGKV 640
FRMP NLEHRACI+DLLSRAGKVDEAYSFYKMMFKEPS+ VLG LLDACRVNGSVELGKV
Sbjct: 542 FRMPPNLEHRACIVDLLSRAGKVDEAYSFYKMMFKEPSMVVLGTLLDACRVNGSVELGKV 601
Query: 641 IARDMFELKPVDAGNFLQLVHSYASMSRWDGVEEAWTQMRSLGLKKLPGWSSIEVHGTSF 700
IARDMFELKPVD GNF+QL +SYASM+RWDGVE+AWTQMRSLGLKK PGWSSIE+HGT+F
Sbjct: 602 IARDMFELKPVDPGNFVQLANSYASMNRWDGVEKAWTQMRSLGLKKFPGWSSIELHGTTF 661
Query: 701 TFFSVHNSHPKIEDIILTVKSLSNDIRKMHVENEISDDFVE 742
TFF+ HNSHPKIE IILTVK+LS DIR ++++NEI +DFVE
Sbjct: 662 TFFAAHNSHPKIEKIILTVKALSKDIRNLYIKNEICEDFVE 702
BLAST of Lsi06G000580.1 vs. NCBI nr
Match:
XP_038878475.1 (pentatricopeptide repeat-containing protein At4g04370 [Benincasa hispida] >XP_038878476.1 pentatricopeptide repeat-containing protein At4g04370 [Benincasa hispida])
HSP 1 Score: 1411.4 bits (3652), Expect = 0.0e+00
Identity = 698/741 (94.20%), Postives = 719/741 (97.03%), Query Frame = 0
Query: 3 RLIHEPIAHGSTKSFNSLINRLSSQGAHHQVLQTYISFQNTNTPPDAYTFPSLLKACTNL 62
+LIHEPIAHGSTKSFNSL+NRLSSQGAHHQVLQTYISFQNTNTPPDAYTFPSLLKACTNL
Sbjct: 13 KLIHEPIAHGSTKSFNSLLNRLSSQGAHHQVLQTYISFQNTNTPPDAYTFPSLLKACTNL 72
Query: 63 NLFSNGLSIHQSVIVHGLSHDSYIGSSLISFYAKFGCIQFGRKVFDTMPERNVVPWTTLI 122
N+FSNGLSIHQSVIV+GLSHDSYIGSSLISFYAKFGCI FGRKVFDTMPERNVVPWTTLI
Sbjct: 73 NMFSNGLSIHQSVIVNGLSHDSYIGSSLISFYAKFGCIHFGRKVFDTMPERNVVPWTTLI 132
Query: 123 GCYSRQGDIDIAFSRFKQMRESGIQPTSVTFLSLLPGVSELPLLLCLHCLIVLYGFESDL 182
GCYSRQGDIDIAFS FKQMRESGIQPTSVTFLSLLPG+SELPLLLCLHCLIVLYGFESDL
Sbjct: 133 GCYSRQGDIDIAFSMFKQMRESGIQPTSVTFLSLLPGISELPLLLCLHCLIVLYGFESDL 192
Query: 183 ALSNSMVNMYGKCGRIADARSLFESMDYRDIVSWNSLLSAYSKIGGIEEILQLVQGMRIE 242
AL NSMVNMYGKCG+I DARSLFESMDYRD+VSWNSLLSAYSKIGGIEEIL+ +QGMRIE
Sbjct: 193 ALLNSMVNMYGKCGKIGDARSLFESMDYRDLVSWNSLLSAYSKIGGIEEILKFIQGMRIE 252
Query: 243 DIKPDKQTFCSALSASAIKGDLRFGKLVHGLILKDGLDIDQQVETALVVLYLRCRCLDLA 302
DIKPDKQTFCSALSASAIKGDLRFGKLVH LILKDG DIDQQVETAL+VLYLRCRCLDLA
Sbjct: 253 DIKPDKQTFCSALSASAIKGDLRFGKLVHCLILKDGSDIDQQVETALIVLYLRCRCLDLA 312
Query: 303 HKVFESTTEKDVVLWTAMISGLVQNDCADKALGVFSQMIESNVELSTATLASALAACAQL 362
H+VF+STTEKD VLWTAMISGLVQNDCADKALGVF QMIESNVE STATLASAL+ACAQL
Sbjct: 313 HEVFKSTTEKDAVLWTAMISGLVQNDCADKALGVFYQMIESNVEPSTATLASALSACAQL 372
Query: 363 GCCDIGTSIHGYVLRQGIMLDIPAQNSLVTMYAKCNKLEQSCSIFNKMVEKDLVSWNAIV 422
CCDIGTSIHGYVLRQGI+LDIPAQNSLVTMYAKCNKLEQSCSIFN+MVEKDLVSWNAIV
Sbjct: 373 VCCDIGTSIHGYVLRQGILLDIPAQNSLVTMYAKCNKLEQSCSIFNEMVEKDLVSWNAIV 432
Query: 423 AGHAKNGYLSKAIFFFNEMRTSLQRPDSITVTSLLQACGSAGALCQGKWIHNFVLRSSLI 482
AGHAKNGYLSKAIFFFNEMRTS QRPDSITVTSLLQACGSAGAL QGKWIHNFVLRSSLI
Sbjct: 433 AGHAKNGYLSKAIFFFNEMRTSFQRPDSITVTSLLQACGSAGALFQGKWIHNFVLRSSLI 492
Query: 483 PCIMTETALVDMYFKCGNLEIAQKCFDYMLQQDLVTWSILIAGYGFNGKGEIALRKYSEF 542
PCIMTETALVDMYFKCGNL AQKCFDYMLQ+DLVTWSILIAGYGFNGKGEIALRKYSEF
Sbjct: 493 PCIMTETALVDMYFKCGNLGTAQKCFDYMLQKDLVTWSILIAGYGFNGKGEIALRKYSEF 552
Query: 543 LGTGMEPNHVIFLSVLSACSHSGLISQGLSIYESMTKDFRMPANLEHRACIIDLLSRAGK 602
LGTGMEPNHVIFLSVLSACSHSGLI QGL+IYESMTKDFRM NLEHRACIIDLLSRAGK
Sbjct: 553 LGTGMEPNHVIFLSVLSACSHSGLIIQGLNIYESMTKDFRMSPNLEHRACIIDLLSRAGK 612
Query: 603 VDEAYSFYKMMFKEPSIDVLGILLDACRVNGSVELGKVIARDMFELKPVDAGNFLQLVHS 662
VDEAYSFYKMMFKEP+IDVLGILLDACRVNGSV+LGKVIARDMFELKPVDAGNF+QL HS
Sbjct: 613 VDEAYSFYKMMFKEPAIDVLGILLDACRVNGSVQLGKVIARDMFELKPVDAGNFVQLAHS 672
Query: 663 YASMSRWDGVEEAWTQMRSLGLKKLPGWSSIEVHGTSFTFFSVHNSHPKIEDIILTVKSL 722
YASMSRWDGVE AWTQMRSLGLKKLPGWSSIEVHGTSFTFFSVHNSHPKIEDIILTVKSL
Sbjct: 673 YASMSRWDGVEAAWTQMRSLGLKKLPGWSSIEVHGTSFTFFSVHNSHPKIEDIILTVKSL 732
Query: 723 SNDIRKMHVENEISDDFVEIS 744
S DIRKMHVENEI +DFVEIS
Sbjct: 733 SKDIRKMHVENEIREDFVEIS 753
BLAST of Lsi06G000580.1 vs. NCBI nr
Match:
XP_016899786.1 (PREDICTED: pentatricopeptide repeat-containing protein At4g04370 [Cucumis melo])
HSP 1 Score: 1346.6 bits (3484), Expect = 0.0e+00
Identity = 662/741 (89.34%), Postives = 703/741 (94.87%), Query Frame = 0
Query: 1 MNRLIHEPIAHGSTKSFNSLINRLSSQGAHHQVLQTYISFQNTNTPPDAYTFPSLLKACT 60
M+RLIHE IAHGSTKSFNSL++RLSSQGAHHQVLQTYIS Q T+TP DAYTFPSL KACT
Sbjct: 1 MSRLIHESIAHGSTKSFNSLVSRLSSQGAHHQVLQTYISMQKTHTPSDAYTFPSLFKACT 60
Query: 61 NLNLFSNGLSIHQSVIVHGLSHDSYIGSSLISFYAKFGCIQFGRKVFDTMPERNVVPWTT 120
NLNLFS+GLS+HQSV+V+GLSHDSYIGSSLISFYAKFGCI GRKVFDTM +RNVVPWTT
Sbjct: 61 NLNLFSHGLSLHQSVVVNGLSHDSYIGSSLISFYAKFGCIHLGRKVFDTMLKRNVVPWTT 120
Query: 121 LIGCYSRQGDIDIAFSRFKQMRESGIQPTSVTFLSLLPGVSELPLLLCLHCLIVLYGFES 180
+IG YSR+GDIDIAFS FKQMRESGIQPTSVT LSLLPG+S+LPLLLCLHCLI LYGFES
Sbjct: 121 IIGSYSREGDIDIAFSMFKQMRESGIQPTSVTLLSLLPGISKLPLLLCLHCLIFLYGFES 180
Query: 181 DLALSNSMVNMYGKCGRIADARSLFESMDYRDIVSWNSLLSAYSKIGGIEEILQLVQGMR 240
DLALSNSMVNMYGKCGRIADARSLFES+DYRDIVSWNSLLSAYSKIG EEILQLVQ M+
Sbjct: 181 DLALSNSMVNMYGKCGRIADARSLFESIDYRDIVSWNSLLSAYSKIGATEEILQLVQAMK 240
Query: 241 IEDIKPDKQTFCSALSASAIKGDLRFGKLVHGLILKDGLDIDQQVETALVVLYLRCRCLD 300
IEDIKPDKQTFCSALSASAIKGDLR GKLVHGL+LKDGL+IDQ VE+ALVVLYLRCRCLD
Sbjct: 241 IEDIKPDKQTFCSALSASAIKGDLRLGKLVHGLMLKDGLNIDQHVESALVVLYLRCRCLD 300
Query: 301 LAHKVFESTTEKDVVLWTAMISGLVQNDCADKALGVFSQMIESNVELSTATLASALAACA 360
LAHKVF+STTEKDVV+WTAMISGLVQNDCADKALGVF QMIESNV+ STATLASALAACA
Sbjct: 301 LAHKVFKSTTEKDVVMWTAMISGLVQNDCADKALGVFYQMIESNVQPSTATLASALAACA 360
Query: 361 QLGCCDIGTSIHGYVLRQGIMLDIPAQNSLVTMYAKCNKLEQSCSIFNKMVEKDLVSWNA 420
QLGCCDIG SIHGYVLRQGIMLDIPAQNSLVTMYAKCNKL+QSCSIFNKMVEKD+VSWNA
Sbjct: 361 QLGCCDIGASIHGYVLRQGIMLDIPAQNSLVTMYAKCNKLQQSCSIFNKMVEKDVVSWNA 420
Query: 421 IVAGHAKNGYLSKAIFFFNEMRTSLQRPDSITVTSLLQACGSAGALCQGKWIHNFVLRSS 480
IVAG+AKNGYLSKAIFFFNEMRTS QRPDSITVTSLLQACGSAGALCQGKWIHNFVLRSS
Sbjct: 421 IVAGNAKNGYLSKAIFFFNEMRTSFQRPDSITVTSLLQACGSAGALCQGKWIHNFVLRSS 480
Query: 481 LIPCIMTETALVDMYFKCGNLEIAQKCFDYMLQQDLVTWSILIAGYGFNGKGEIALRKYS 540
LIPCIMTETALVDMYFKCGNLE AQKCFD M Q+DLV WS LI GYGFNGKGEIALRKYS
Sbjct: 481 LIPCIMTETALVDMYFKCGNLENAQKCFDCMSQRDLVAWSTLIVGYGFNGKGEIALRKYS 540
Query: 541 EFLGTGMEPNHVIFLSVLSACSHSGLISQGLSIYESMTKDFRMPANLEHRACIIDLLSRA 600
EFLGTGMEPNHVIF+SVLSACSHSGLISQGLSIYESMTKDFRMP NLEHRACI+DLLSRA
Sbjct: 541 EFLGTGMEPNHVIFISVLSACSHSGLISQGLSIYESMTKDFRMPPNLEHRACIVDLLSRA 600
Query: 601 GKVDEAYSFYKMMFKEPSIDVLGILLDACRVNGSVELGKVIARDMFELKPVDAGNFLQLV 660
GKVDEAYSFYKMMFKEPS+ VLG LLDACRVNGSVELGKVIARDMFELKPVD GNF+QL
Sbjct: 601 GKVDEAYSFYKMMFKEPSMVVLGTLLDACRVNGSVELGKVIARDMFELKPVDPGNFVQLA 660
Query: 661 HSYASMSRWDGVEEAWTQMRSLGLKKLPGWSSIEVHGTSFTFFSVHNSHPKIEDIILTVK 720
+SYASM+RWDGVE+AWTQMRSLGLKK PGWSSIE+HGT+FTFF+ HNSHPKIE IILTVK
Sbjct: 661 NSYASMNRWDGVEKAWTQMRSLGLKKFPGWSSIELHGTTFTFFAAHNSHPKIEKIILTVK 720
Query: 721 SLSNDIRKMHVENEISDDFVE 742
+LS DIR ++++NEI +DFVE
Sbjct: 721 ALSKDIRNLYIKNEICEDFVE 741
BLAST of Lsi06G000580.1 vs. NCBI nr
Match:
XP_004139152.1 (pentatricopeptide repeat-containing protein At4g04370 [Cucumis sativus])
HSP 1 Score: 1313.1 bits (3397), Expect = 0.0e+00
Identity = 648/743 (87.21%), Postives = 692/743 (93.14%), Query Frame = 0
Query: 1 MNRLIHEPIAHGSTKSFNSLINRLSSQGAHHQVLQTYISFQNTNTPPDAYTFPSLLKACT 60
M+ IHE IAHG TKSFNSL++RLS QGAHHQVLQTYIS Q T+T DAYTFPSL KACT
Sbjct: 1 MSGFIHESIAHGCTKSFNSLVSRLSYQGAHHQVLQTYISMQKTHTQLDAYTFPSLFKACT 60
Query: 61 NLNLFSNGLSIHQSVIVHGLSHDSYIGSSLISFYAKFGCIQFGRKVFDTMPERNVVPWTT 120
NLNLFS+GLS+HQSV+V+GLSHDSYIGSSLISFYAKFGCI GRKVFDTM +RNVVPWTT
Sbjct: 61 NLNLFSHGLSLHQSVVVNGLSHDSYIGSSLISFYAKFGCIHLGRKVFDTMLKRNVVPWTT 120
Query: 121 LIGCYSRQGDIDIAFSRFKQMRESGIQPTSVTFLSLLPGVSELPLLLCLHCLIVLYGFES 180
+IG YSR+GDIDIAFS FKQMRESGIQPTSVT LSLLPG+S+LPLLLCLHCLI+L+GFES
Sbjct: 121 IIGSYSREGDIDIAFSMFKQMRESGIQPTSVTLLSLLPGISKLPLLLCLHCLIILHGFES 180
Query: 181 DLALSNSMVNMYGKCGRIADARSLFESMDYRDIVSWNSLLSAYSKIGGIEEILQLVQGMR 240
DLALSNSMVNMYGKCGRIADAR LF+S+D RDIVSWNSLLSAYSKIG EEILQL+Q M+
Sbjct: 181 DLALSNSMVNMYGKCGRIADARRLFQSIDCRDIVSWNSLLSAYSKIGATEEILQLLQAMK 240
Query: 241 IEDIKPDKQTFCSALSASAIKGDLRFGKLVHGLILKDGLDIDQQVETALVVLYLRCRCLD 300
IEDIKPDKQTFCSALSASAIKGDLR GKLVHGL+LKDGL+IDQ VE+ALVVLYLRCRCLD
Sbjct: 241 IEDIKPDKQTFCSALSASAIKGDLRLGKLVHGLMLKDGLNIDQHVESALVVLYLRCRCLD 300
Query: 301 LAHKVFESTTEKDVVLWTAMISGLVQNDCADKALGVFSQMIESNVELSTATLASALAACA 360
A+KVF+STTEKDVV+WTAMISGLVQNDCADKALGVF QMIESNV+ STATLAS LAACA
Sbjct: 301 PAYKVFKSTTEKDVVMWTAMISGLVQNDCADKALGVFYQMIESNVKPSTATLASGLAACA 360
Query: 361 QLGCCDIGTSIHGYVLRQGIMLDIPAQNSLVTMYAKCNKLEQSCSIFNKMVEKDLVSWNA 420
QLGCCDIG SIHGYVLRQGIMLDIPAQNSLVTMYAKCNKL+QSCSIFNKMVEKDLVSWNA
Sbjct: 361 QLGCCDIGASIHGYVLRQGIMLDIPAQNSLVTMYAKCNKLQQSCSIFNKMVEKDLVSWNA 420
Query: 421 IVAGHAKNGYLSKAIFFFNEMRTSLQRPDSITVTSLLQACGSAGALCQGKWIHNFVLRSS 480
IVAGHAKNGYLSK IFFFNEMR S RPDSITVTSLLQACGSAGALCQGKWIHNFVLRSS
Sbjct: 421 IVAGHAKNGYLSKGIFFFNEMRKSFLRPDSITVTSLLQACGSAGALCQGKWIHNFVLRSS 480
Query: 481 LIPCIMTETALVDMYFKCGNLEIAQKCFDYMLQQDLVTWSILIAGYGFNGKGEIALRKYS 540
LIPCIMTETALVDMYFKCGNLE AQKCFD MLQ+DLV WS LI GYGFNGKGEIALRKYS
Sbjct: 481 LIPCIMTETALVDMYFKCGNLENAQKCFDCMLQRDLVAWSTLIVGYGFNGKGEIALRKYS 540
Query: 541 EFLGTGMEPNHVIFLSVLSACSHSGLISQGLSIYESMTKDFRMPANLEHRACIIDLLSRA 600
EFLGTGMEPNHVIF+SVLSACSH GLIS+GLSIYESMTKDFRM NLEHRAC++DLLSRA
Sbjct: 541 EFLGTGMEPNHVIFISVLSACSHGGLISKGLSIYESMTKDFRMSPNLEHRACVVDLLSRA 600
Query: 601 GKVDEAYSFYKMMFKEPSIDVLGILLDACRVNGSVELGKVIARDMFELKPVDAGNFLQLV 660
GKVDEAYSFYKMMFKEPSI VLG+LLDACRVNG VELGKVIARDMFELKPVD GNF+QL
Sbjct: 601 GKVDEAYSFYKMMFKEPSIVVLGMLLDACRVNGRVELGKVIARDMFELKPVDPGNFVQLA 660
Query: 661 HSYASMSRWDGVEEAWTQMRSLGLKKLPGWSSIEVHGTSFTFFSVHNSHPKIEDIILTVK 720
+SYASMSRWDGVE+AWTQMRSLGLKK PGWSSIEVHGT+FTFF+ HNSHPKIE IILTVK
Sbjct: 661 NSYASMSRWDGVEKAWTQMRSLGLKKYPGWSSIEVHGTTFTFFASHNSHPKIEKIILTVK 720
Query: 721 SLSNDIRKMHVENEISDDFVEIS 744
+LS +IR ++V+NEI +DFVE S
Sbjct: 721 ALSKNIRNLYVKNEICEDFVEYS 743
BLAST of Lsi06G000580.1 vs. NCBI nr
Match:
XP_022159804.1 (pentatricopeptide repeat-containing protein At4g04370 [Momordica charantia] >XP_022159805.1 pentatricopeptide repeat-containing protein At4g04370 [Momordica charantia] >XP_022159806.1 pentatricopeptide repeat-containing protein At4g04370 [Momordica charantia] >XP_022159807.1 pentatricopeptide repeat-containing protein At4g04370 [Momordica charantia])
HSP 1 Score: 1299.6 bits (3362), Expect = 0.0e+00
Identity = 639/746 (85.66%), Postives = 689/746 (92.36%), Query Frame = 0
Query: 1 MNRLIH-------EPIAHGSTKSFNSLINRLSSQGAHHQVLQTYISFQNTNTPPDAYTFP 60
MNRLIH PIA+GSTKSFNS+INRLSSQGAHHQVLQTY S Q T+TPPDAYTFP
Sbjct: 1 MNRLIHGLKPPCPPPIANGSTKSFNSIINRLSSQGAHHQVLQTYASMQKTSTPPDAYTFP 60
Query: 61 SLLKACTNLNLFSNGLSIHQSVIVHGLSHDSYIGSSLISFYAKFGCIQFGRKVFDTMPER 120
SLLKACT LNLF +GLS+HQS+IV+G S DSYIGSSLISFYAKFGCI GRKVFD MPER
Sbjct: 61 SLLKACTILNLFLDGLSLHQSIIVNGFSLDSYIGSSLISFYAKFGCIDIGRKVFDIMPER 120
Query: 121 NVVPWTTLIGCYSRQGDIDIAFSRFKQMRESGIQPTSVTFLSLLPGVSELPLLLCLHCLI 180
NVVPWTT+IGCYSR+G+ID+AFS FKQMR +GIQPTSVT LSLLP +SELPLL CLHC I
Sbjct: 121 NVVPWTTIIGCYSREGEIDVAFSMFKQMRATGIQPTSVTLLSLLPSISELPLLQCLHCWI 180
Query: 181 VLYGFESDLALSNSMVNMYGKCGRIADARSLFESMDYRDIVSWNSLLSAYSKIGGIEEIL 240
+LYGFES+L+LSNSMVN+YG+CG I DARSLFESMDYRDIVSWNSLLSAYSKIG IEEIL
Sbjct: 181 ILYGFESNLSLSNSMVNVYGRCGSIEDARSLFESMDYRDIVSWNSLLSAYSKIGVIEEIL 240
Query: 241 QLVQGMRIEDIKPDKQTFCSALSASAIKGDLRFGKLVHGLILKDGLDIDQQVETALVVLY 300
QLV GMR EDIKPDKQTFCSALSASAIKGD+R GKLVHGLI+KDGL IDQQVETAL+VLY
Sbjct: 241 QLVLGMRTEDIKPDKQTFCSALSASAIKGDIRLGKLVHGLIIKDGLGIDQQVETALMVLY 300
Query: 301 LRCRCLDLAHKVFESTTEKDVVLWTAMISGLVQNDCADKALGVFSQMIESNVELSTATLA 360
LRC+ LDLA KVF+STTEKD+VLWTAMISGLVQNDCADKAL VF QM+ESN+E TATLA
Sbjct: 301 LRCKSLDLALKVFKSTTEKDMVLWTAMISGLVQNDCADKALRVFYQMLESNMEPGTATLA 360
Query: 361 SALAACAQLGCCDIGTSIHGYVLRQGIMLDIPAQNSLVTMYAKCNKLEQSCSIFNKMVEK 420
SALAACAQLGC DIGT IHGY+LRQGIMLDIPAQN+LVTMYAKCN+LEQSC IFNKMVE+
Sbjct: 361 SALAACAQLGCYDIGTLIHGYILRQGIMLDIPAQNALVTMYAKCNRLEQSCGIFNKMVER 420
Query: 421 DLVSWNAIVAGHAKNGYLSKAIFFFNEMRTSLQRPDSITVTSLLQACGSAGALCQGKWIH 480
DLVSWNAIVAGHAKNGYLSKAI FFNEMRTSLQRPDSITVTSLLQACGSAGAL QGKWIH
Sbjct: 421 DLVSWNAIVAGHAKNGYLSKAILFFNEMRTSLQRPDSITVTSLLQACGSAGALWQGKWIH 480
Query: 481 NFVLRSSLIPCIMTETALVDMYFKCGNLEIAQKCFDYMLQQDLVTWSILIAGYGFNGKGE 540
NFV RSSL+PCIM ETAL+DMYFKCGNLEIAQKCFDYM QDLVTWS LI+GYGFNG GE
Sbjct: 481 NFVFRSSLMPCIMIETALIDMYFKCGNLEIAQKCFDYMPHQDLVTWSTLISGYGFNGNGE 540
Query: 541 IALRKYSEFLGTGMEPNHVIFLSVLSACSHSGLISQGLSIYESMTKDFRMPANLEHRACI 600
IALRKYSEFLGTG+EPNHVIFLSVLSACSHSGL++QGL IYESMT+DF MP NLEHRACI
Sbjct: 541 IALRKYSEFLGTGLEPNHVIFLSVLSACSHSGLVNQGLRIYESMTRDFLMPPNLEHRACI 600
Query: 601 IDLLSRAGKVDEAYSFYKMMFKEPSIDVLGILLDACRVNGSVELGKVIARDMFELKPVDA 660
+DLLSRAGKV+EAYSFYKMMF+EPSIDVLGILLDACRVNGSVELG+ IARD+F LKPVD
Sbjct: 601 VDLLSRAGKVEEAYSFYKMMFQEPSIDVLGILLDACRVNGSVELGEAIARDIFALKPVDP 660
Query: 661 GNFLQLVHSYASMSRWDGVEEAWTQMRSLGLKKLPGWSSIEVHGTSFTFFSVHNSHPKIE 720
GN++QL HSYASM RWDGVEEAWTQMRSLGLKKLPGWSSIEVHGTSF+F+SVHNSHPKIE
Sbjct: 661 GNYVQLAHSYASMGRWDGVEEAWTQMRSLGLKKLPGWSSIEVHGTSFSFYSVHNSHPKIE 720
Query: 721 DIILTVKSLSNDIRKMHVENEISDDF 740
+I+LTVKSLSNDIRKMH+ENEI+ DF
Sbjct: 721 EIMLTVKSLSNDIRKMHIENEINKDF 746
BLAST of Lsi06G000580.1 vs. NCBI nr
Match:
XP_022931568.1 (pentatricopeptide repeat-containing protein At4g04370 [Cucurbita moschata] >XP_022931569.1 pentatricopeptide repeat-containing protein At4g04370 [Cucurbita moschata])
HSP 1 Score: 1280.8 bits (3313), Expect = 0.0e+00
Identity = 635/739 (85.93%), Postives = 677/739 (91.61%), Query Frame = 0
Query: 1 MNRLIHEPIAHGSTKSFNSLINRLSSQGAHHQVLQTYISFQNTNTPPDAYTFPSLLKACT 60
MNRLIHE I HGSTKSFN+LINRLSSQ AHHQVLQTYIS NTNTPPDAYTFPSLLKACT
Sbjct: 1 MNRLIHESITHGSTKSFNALINRLSSQAAHHQVLQTYISMLNTNTPPDAYTFPSLLKACT 60
Query: 61 NLNLFSNGLSIHQSVIVHGLSHDSYIGSSLISFYAKFGCIQFGRKVFDTMPERNVVPWTT 120
LN FSNGLSIHQSVIV+GLSHDSYIGSSLISFYAKFGCI GRKVFDTMPERNVVPWT
Sbjct: 61 LLNSFSNGLSIHQSVIVNGLSHDSYIGSSLISFYAKFGCIHLGRKVFDTMPERNVVPWTA 120
Query: 121 LIGCYSRQGDIDIAFSRFKQMRESGIQPTSVTFLSLLPGVSELPLLLCLHCLIVLYGFES 180
+IGCYSRQGD+ IAF+ FKQMRE+ I PTSVTFLSLLPG+SELPLL LHCLIVLYGF S
Sbjct: 121 IIGCYSRQGDVGIAFTMFKQMRENEIHPTSVTFLSLLPGISELPLLQGLHCLIVLYGFGS 180
Query: 181 DLALSNSMVNMYGKCGRIADARSLFESMDYRDIVSWNSLLSAYSKIGGIEEILQLVQGMR 240
DLALSNSMV+MYG+CG + A SLFESMD RDIVSWNSLLSAYSKI GIEEILQLV MR
Sbjct: 181 DLALSNSMVSMYGRCGSVDYATSLFESMDSRDIVSWNSLLSAYSKIVGIEEILQLVHSMR 240
Query: 241 IEDIKPDKQTFCSALSASAIKGDLRFGKLVHGLILKDGLDIDQQVETALVVLYLRCRCLD 300
IE IKPDK+TFCS LSASA K D+R GKLVHGL+LK GLD+DQQVET LVVLYL+C CLD
Sbjct: 241 IEGIKPDKRTFCSVLSASATKCDIRLGKLVHGLVLKHGLDMDQQVETTLVVLYLKCSCLD 300
Query: 301 LAHKVFESTTEKDVVLWTAMISGLVQNDCADKALGVFSQMIESNVELSTATLASALAACA 360
A KVFEST EKDVVLWTAMISGLVQNDC+D AL VF M+ESNVEL TATLAS LAACA
Sbjct: 301 FALKVFESTIEKDVVLWTAMISGLVQNDCSDNALEVFYHMVESNVELGTATLASILAACA 360
Query: 361 QLGCCDIGTSIHGYVLRQGIMLDIPAQNSLVTMYAKCNKLEQSCSIFNKMVEKDLVSWNA 420
QLGC IGTSIHGY+LRQGIM DIPAQNSLVTMYAKCN+LEQSC+IFNK+VEK+LVSWNA
Sbjct: 361 QLGCYHIGTSIHGYILRQGIMFDIPAQNSLVTMYAKCNRLEQSCAIFNKIVEKNLVSWNA 420
Query: 421 IVAGHAKNGYLSKAIFFFNEMR-TSLQRPDSITVTSLLQACGSAGALCQGKWIHNFVLRS 480
I+AGHAKNGYLSKAIFFF+EMR TS QRPDSITVTSLLQACGSAGALCQGKWIH+F+ RS
Sbjct: 421 IIAGHAKNGYLSKAIFFFSEMRATSFQRPDSITVTSLLQACGSAGALCQGKWIHDFIFRS 480
Query: 481 SLIPCIMTETALVDMYFKCGNLEIAQKCFDYMLQQDLVTWSILIAGYGFNGKGEIALRKY 540
SLIPCIMTETALVDMYFKCG++E AQKCFDYMLQ+DLVTWS LIAGYGFNG+GEIALRKY
Sbjct: 481 SLIPCIMTETALVDMYFKCGDVENAQKCFDYMLQKDLVTWSTLIAGYGFNGQGEIALRKY 540
Query: 541 SEFLGTGMEPNHVIFLSVLSACSHSGLISQGLSIYESMTKDFRMPANLEHRACIIDLLSR 600
SEFLGTGMEPNHVIFLSVLSACSHSGLI+QGLSIYESMTKDF MP NLEHRACIIDLLSR
Sbjct: 541 SEFLGTGMEPNHVIFLSVLSACSHSGLINQGLSIYESMTKDFSMPTNLEHRACIIDLLSR 600
Query: 601 AGKVDEAYSFYKMMFKEPSIDVLGILLDACRVNGSVELGKVIARDMFELKPVDAGNFLQL 660
AGKV+EAYSFY MF+EPSIDVLGILLDACRVNG+VELG+VI+RDMFELKPVDAGN++QL
Sbjct: 601 AGKVEEAYSFYNRMFEEPSIDVLGILLDACRVNGNVELGEVISRDMFELKPVDAGNYVQL 660
Query: 661 VHSYASMSRWDGVEEAWTQMRSLGLKKLPGWSSIEVHGTSFTFFSVHNSHPKIEDIILTV 720
HSYAS SRWDGVE AWTQMRSLGLKKLPGWS IEV GTSFTFFSVHNSHPKIE+I+ TV
Sbjct: 661 AHSYASTSRWDGVEVAWTQMRSLGLKKLPGWSCIEVDGTSFTFFSVHNSHPKIEEIVWTV 720
Query: 721 KSLSNDIRKMHVENEISDD 739
KSLS DIRKMH+E+EIS D
Sbjct: 721 KSLSKDIRKMHIESEISPD 739
BLAST of Lsi06G000580.1 vs. TAIR 10
Match:
AT4G04370.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 797.3 bits (2058), Expect = 1.0e-230
Identity = 391/722 (54.16%), Postives = 520/722 (72.02%), Query Frame = 0
Query: 13 STKSFNSLINRLSSQGAHHQVLQTYISFQNTNTPPDAYTFPSLLKACTNLNLFSNGLSIH 72
STK FNS IN LSS G H QVL T+ S PD +TFPSLLKAC +L S GLSIH
Sbjct: 10 STKYFNSHINHLSSHGDHKQVLSTFSSMLANKLLPDTFTFPSLLKACASLQRLSFGLSIH 69
Query: 73 QSVIVHGLSHDSYIGSSLISFYAKFGCIQFGRKVFDTMPERNVVPWTTLIGCYSRQGDID 132
Q V+V+G S D YI SSL++ YAKFG + RKVF+ M ER+VV WT +IGCYSR G +
Sbjct: 70 QQVLVNGFSSDFYISSSLVNLYAKFGLLAHARKVFEEMRERDVVHWTAMIGCYSRAGIVG 129
Query: 133 IAFSRFKQMRESGIQPTSVTFLSLLPGVSELPLLLCLHCLIVLYGFESDLALSNSMVNMY 192
A S +MR GI+P VT L +L GV E+ L CLH V+YGF+ D+A+ NSM+N+Y
Sbjct: 130 EACSLVNEMRFQGIKPGPVTLLEMLSGVLEITQLQCLHDFAVIYGFDCDIAVMNSMLNLY 189
Query: 193 GKCGRIADARSLFESMDYRDIVSWNSLLSAYSKIGGIEEILQLVQGMRIEDIKPDKQTFC 252
KC + DA+ LF+ M+ RD+VSWN+++S Y+ +G + EIL+L+ MR + ++PD+QTF
Sbjct: 190 CKCDHVGDAKDLFDQMEQRDMVSWNTMISGYASVGNMSEILKLLYRMRGDGLRPDQQTFG 249
Query: 253 SALSASAIKGDLRFGKLVHGLILKDGLDIDQQVETALVVLYLRCRCLDLAHKVFESTTEK 312
++LS S DL G+++H I+K G D+D ++TAL+ +YL+C + +++V E+ K
Sbjct: 250 ASLSVSGTMCDLEMGRMLHCQIVKTGFDVDMHLKTALITMYLKCGKEEASYRVLETIPNK 309
Query: 313 DVVLWTAMISGLVQNDCADKALGVFSQMIESNVELSTATLASALAACAQLGCCDIGTSIH 372
DVV WT MISGL++ A+KAL VFS+M++S +LS+ +AS +A+CAQLG D+G S+H
Sbjct: 310 DVVCWTVMISGLMRLGRAEKALIVFSEMLQSGSDLSSEAIASVVASCAQLGSFDLGASVH 369
Query: 373 GYVLRQGIMLDIPAQNSLVTMYAKCNKLEQSCSIFNKMVEKDLVSWNAIVAGHAKNGYLS 432
GYVLR G LD PA NSL+TMYAKC L++S IF +M E+DLVSWNAI++G+A+N L
Sbjct: 370 GYVLRHGYTLDTPALNSLITMYAKCGHLDKSLVIFERMNERDLVSWNAIISGYAQNVDLC 429
Query: 433 KAIFFFNEMR-TSLQRPDSITVTSLLQACGSAGALCQGKWIHNFVLRSSLIPCIMTETAL 492
KA+ F EM+ ++Q+ DS TV SLLQAC SAGAL GK IH V+RS + PC + +TAL
Sbjct: 430 KALLLFEEMKFKTVQQVDSFTVVSLLQACSSAGALPVGKLIHCIVIRSFIRPCSLVDTAL 489
Query: 493 VDMYFKCGNLEIAQKCFDYMLQQDLVTWSILIAGYGFNGKGEIALRKYSEFLGTGMEPNH 552
VDMY KCG LE AQ+CFD + +D+V+W ILIAGYGF+GKG+IAL YSEFL +GMEPNH
Sbjct: 490 VDMYSKCGYLEAAQRCFDSISWKDVVSWGILIAGYGFHGKGDIALEIYSEFLHSGMEPNH 549
Query: 553 VIFLSVLSACSHSGLISQGLSIYESMTKDFRMPANLEHRACIIDLLSRAGKVDEAYSFYK 612
VIFL+VLS+CSH+G++ QGL I+ SM +DF + N EH AC++DLL RA ++++A+ FYK
Sbjct: 550 VIFLAVLSSCSHNGMVQQGLKIFSSMVRDFGVEPNHEHLACVVDLLCRAKRIEDAFKFYK 609
Query: 613 MMFKEPSIDVLGILLDACRVNGSVELGKVIARDMFELKPVDAGNFLQLVHSYASMSRWDG 672
F PSIDVLGI+LDACR NG E+ +I DM ELKP DAG++++L HS+A+M RWD
Sbjct: 610 ENFTRPSIDVLGIILDACRANGKTEVEDIICEDMIELKPGDAGHYVKLGHSFAAMKRWDD 669
Query: 673 VEEAWTQMRSLGLKKLPGWSSIEVHGTSFTFFSVHNSHPKIEDIILTVKSLSNDIRKMHV 732
V E+W QMRSLGLKKLPGWS IE++G + TFF H SH +D + +K LS ++ +
Sbjct: 670 VSESWNQMRSLGLKKLPGWSKIEMNGKTTTFFMNHTSHS--DDTVSLLKLLSREMMQFGS 729
Query: 733 EN 734
N
Sbjct: 730 NN 729
BLAST of Lsi06G000580.1 vs. TAIR 10
Match:
AT1G11290.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 437.6 bits (1124), Expect = 2.0e-122
Identity = 234/710 (32.96%), Postives = 397/710 (55.92%), Query Frame = 0
Query: 46 PPDAYTFPS--LLKACTNLNLFSNGLSIHQSVIVHGLSHDSYIGSSLISFYAKFGCIQFG 105
P + Y P+ LL+ C++L L + V +GL + + + L+S + ++G +
Sbjct: 32 PANVYEHPAALLLERCSSLKELRQILPL---VFKNGLYQEHFFQTKLVSLFCRYGSVDEA 91
Query: 106 RKVFDTMPERNVVPWTTLIGCYSRQGDIDIAFSRFKQMRESGIQPTSVTFLSLLP---GV 165
+VF+ + + V + T++ +++ D+D A F +MR ++P F LL
Sbjct: 92 ARVFEPIDSKLNVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDE 151
Query: 166 SELPLLLCLHCLIVLYGFESDLALSNSMVNMYGKCGRIADARSLFESMDYRDIVSWNSLL 225
+EL + +H L+V GF DL + NMY KC ++ +AR +F+ M RD+VSWN+++
Sbjct: 152 AELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIV 211
Query: 226 SAYSKIGGIEEILQLVQGMRIEDIKPDKQTFCSALSASAIKGDLRFGKLVHGLILKDGLD 285
+ YS+ G L++V+ M E++KP T S L A + + GK +HG ++ G D
Sbjct: 212 AGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFD 271
Query: 286 IDQQVETALVVLYLRCRCLDLAHKVFESTTEKDVVLWTAMISGLVQNDCADKALGVFSQM 345
+ TALV +Y +C L+ A ++F+ E++VV W +MI VQN+ +A+ +F +M
Sbjct: 272 SLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKM 331
Query: 346 IESNVELSTATLASALAACAQLGCCDIGTSIHGYVLRQGIMLDIPAQNSLVTMYAKCNKL 405
++ V+ + ++ AL ACA LG + G IH + G+ ++ NSL++MY KC ++
Sbjct: 332 LDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEV 391
Query: 406 EQSCSIFNKMVEKDLVSWNAIVAGHAKNGYLSKAIFFFNEMRTSLQRPDSITVTSLLQAC 465
+ + S+F K+ + LVSWNA++ G A+NG A+ +F++MR+ +PD+ T S++ A
Sbjct: 392 DTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAI 451
Query: 466 GSAGALCQGKWIHNFVLRSSLIPCIMTETALVDMYFKCGNLEIAQKCFDYMLQQDLVTWS 525
KWIH V+RS L + TALVDMY KCG + IA+ FD M ++ + TW+
Sbjct: 452 AELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWN 511
Query: 526 ILIAGYGFNGKGEIALRKYSEFLGTGMEPNHVIFLSVLSACSHSGLISQGLSIYESMTKD 585
+I GYG +G G+ AL + E ++PN V FLSV+SACSHSGL+ GL + M ++
Sbjct: 512 AMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKEN 571
Query: 586 FRMPANLEHRACIIDLLSRAGKVDEAYSFYKMMFKEPSIDVLGILLDACRVNGSVELGKV 645
+ + +++H ++DLL RAG+++EA+ F M +P+++V G +L AC+++ +V +
Sbjct: 572 YSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFAEK 631
Query: 646 IARDMFELKPVDAGNFLQLVHSYASMSRWDGVEEAWTQMRSLGLKKLPGWSSIEVHGTSF 705
A +FEL P D G + L + Y + S W+ V + M GL+K PG S +E+
Sbjct: 632 AAERLFELNPDDGGYHVLLANIYRAASMWEKVGQVRVSMLRQGLRKTPGCSMVEIKNEVH 691
Query: 706 TFFSVHNSHPKIEDIILTVKSLSNDIRK----------MHVENEISDDFV 741
+FFS +HP + I ++ L I++ + VEN++ + +
Sbjct: 692 SFFSGSTAHPDSKKIYAFLEKLICHIKEAGYVPDTNLVLGVENDVKEQLL 738
BLAST of Lsi06G000580.1 vs. TAIR 10
Match:
AT1G69350.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 422.9 bits (1086), Expect = 5.2e-118
Identity = 233/703 (33.14%), Postives = 393/703 (55.90%), Query Frame = 0
Query: 34 LQTYISFQNTNTPPDAYTFPSLLKACT-NLNLFSNGLSIHQSVIVHGLSHDSYIGSSLIS 93
+ Y + T + FPS+L+AC + S G +H +I G+ D+ I +SL+
Sbjct: 85 IDLYHRLVSETTQISKFVFPSVLRACAGSREHLSVGGKVHGRIIKGGVDDDAVIETSLLC 144
Query: 94 FYAKFGCIQFGRKVFDTMPERNVVPWTTLIGCYSRQGDIDIAFSRFKQMRESGIQPTSVT 153
Y + G + KVFD MP R++V W+TL+ G++ A FK M + G++P +VT
Sbjct: 145 MYGQTGNLSDAEKVFDGMPVRDLVAWSTLVSSCLENGEVVKALRMFKCMVDDGVEPDAVT 204
Query: 154 FLSLLPGVSELPLL---LCLHCLIVLYGFESDLALSNSMVNMYGKCGRIADARSLFESMD 213
+S++ G +EL L +H I F+ D L NS++ MY KCG + + +FE +
Sbjct: 205 MISVVEGCAELGCLRIARSVHGQITRKMFDLDETLCNSLLTMYSKCGDLLSSERIFEKIA 264
Query: 214 YRDIVSWNSLLSAYSKIGGIEEILQLVQGMRIEDIKPDKQTFCSALSASAIKGDLRFGKL 273
++ VSW +++S+Y++ E+ L+ M I+P+ T S LS+ + G +R GK
Sbjct: 265 KKNAVSWTAMISSYNRGEFSEKALRSFSEMIKSGIEPNLVTLYSVLSSCGLIGLIREGKS 324
Query: 274 VHGLILKDGLDID-QQVETALVVLYLRCRCLDLAHKVFESTTEKDVVLWTAMISGLVQND 333
VHG ++ LD + + + ALV LY C L V +++++V W ++IS
Sbjct: 325 VHGFAVRRELDPNYESLSLALVELYAECGKLSDCETVLRVVSDRNIVAWNSLISLYAHRG 384
Query: 334 CADKALGVFSQMIESNVELSTATLASALAACAQLGCCDIGTSIHGYVLRQGIMLDIPAQN 393
+ALG+F QM+ ++ TLAS+++AC G +G IHG+V+R + D QN
Sbjct: 385 MVIQALGLFRQMVTQRIKPDAFTLASSISACENAGLVPLGKQIHGHVIRTDVS-DEFVQN 444
Query: 394 SLVTMYAKCNKLEQSCSIFNKMVEKDLVSWNAIVAGHAKNGYLSKAIFFFNEMRTSLQRP 453
SL+ MY+K ++ + ++FN++ + +V+WN+++ G ++NG +AI F+ M S
Sbjct: 445 SLIDMYSKSGSVDSASTVFNQIKHRSVVTWNSMLCGFSQNGNSVEAISLFDYMYHSYLEM 504
Query: 454 DSITVTSLLQACGSAGALCQGKWIHNFVLRSSLIPCIMTETALVDMYFKCGNLEIAQKCF 513
+ +T +++QAC S G+L +GKW+H+ ++ S L + T+TAL+DMY KCG+L A+ F
Sbjct: 505 NEVTFLAVIQACSSIGSLEKGKWVHHKLIISGL-KDLFTDTALIDMYAKCGDLNAAETVF 564
Query: 514 DYMLQQDLVTWSILIAGYGFNGKGEIALRKYSEFLGTGMEPNHVIFLSVLSACSHSGLIS 573
M + +V+WS +I YG +G+ A+ +++ + +G +PN V+F++VLSAC HSG +
Sbjct: 565 RAMSSRSIVSWSSMINAYGMHGRIGSAISTFNQMVESGTKPNEVVFMNVLSACGHSGSVE 624
Query: 574 QGLSIYESMTKDFRMPANLEHRACIIDLLSRAGKVDEAYSFYKMMFKEPSIDVLGILLDA 633
+G Y ++ K F + N EH AC IDLLSR+G + EAY K M V G L++
Sbjct: 625 EG-KYYFNLMKSFGVSPNSEHFACFIDLLSRSGDLKEAYRTIKEMPFLADASVWGSLVNG 684
Query: 634 CRVNGSVELGKVIARDMFELKPVDAGNFLQLVHSYASMSRWDGVEEAWTQMRSLGLKKLP 693
CR++ +++ K I D+ ++ D G + L + YA W+ + M+S LKK+P
Sbjct: 685 CRIHQKMDIIKAIKNDLSDIVTDDTGYYTLLSNIYAEEGEWEEFRRLRSAMKSSNLKKVP 744
Query: 694 GWSSIEVHGTSFTFFSVHNSHPKIEDIILTVKSLSNDIRKMHV 732
G+S+IE+ F F + + + ++I + +L N + HV
Sbjct: 745 GYSAIEIDQKVFRFGAGEENRIQTDEIYRFLGNLQNLTNEEHV 784
BLAST of Lsi06G000580.1 vs. TAIR 10
Match:
AT4G21300.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 419.5 bits (1077), Expect = 5.7e-117
Identity = 227/723 (31.40%), Postives = 398/723 (55.05%), Query Frame = 0
Query: 9 IAHGSTKSFNSLINRLSSQGAHHQVLQTYISFQNTNTPPDAYTFPSLLKACTNLNLFSNG 68
+ S + +NS+I+ G +Q L Y PD TFP L+KAC L F
Sbjct: 98 LRRSSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFKGI 157
Query: 69 LSIHQSVIVHGLSHDSYIGSSLISFYAKFGCIQFGRKVFDTMPERNVVPWTTLIGCYSRQ 128
+ +V G+ + ++ SSLI Y ++G I K+FD + +++ V W ++ Y++
Sbjct: 158 DFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKC 217
Query: 129 GDIDIAFSRFKQMRESGIQPTSVTF---LSLLPGVSELPLLLCLHCLIVLYGFESDLALS 188
G +D F MR I P +VTF LS+ + L + LH L+V+ G + + ++
Sbjct: 218 GALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIK 277
Query: 189 NSMVNMYGKCGRIADARSLFESMDYRDIVSWNSLLSAYSKIGGIEEILQLVQGMRIEDIK 248
NS+++MY KCGR DA LF M D V+WN ++S Y + G +EE L M +
Sbjct: 278 NSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVL 337
Query: 249 PDKQTFCSALSASAIKGDLRFGKLVHGLILKDGLDIDQQVETALVVLYLRCRCLDLAHKV 308
PD TF S L + + +L + K +H I++ + +D + +AL+ Y +CR + +A +
Sbjct: 338 PDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNI 397
Query: 309 FESTTEKDVVLWTAMISGLVQNDCADKALGVFSQMIESNVELSTATLASALAACAQLGCC 368
F DVV++TAMISG + N +L +F +++ + + TL S L L
Sbjct: 398 FSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLAL 457
Query: 369 DIGTSIHGYVLRQGIMLDIPAQNSLVTMYAKCNKLEQSCSIFNKMVEKDLVSWNAIVAGH 428
+G +HG+++++G +++ MYAKC ++ + IF ++ ++D+VSWN+++
Sbjct: 458 KLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIVSWNSMITRC 517
Query: 429 AKNGYLSKAIFFFNEMRTSLQRPDSITVTSLLQACGSAGALCQGKWIHNFVLRSSLIPCI 488
A++ S AI F +M S D +++++ L AC + + GK IH F+++ SL +
Sbjct: 518 AQSDNPSAAIDIFRQMGVSGICYDCVSISAALSACANLPSESFGKAIHGFMIKHSLASDV 577
Query: 489 MTETALVDMYFKCGNLEIAQKCFDYMLQQDLVTWSILIAGYGFNGKGEIALRKYSEFL-G 548
+E+ L+DMY KCGNL+ A F M ++++V+W+ +IA G +GK + +L + E +
Sbjct: 578 YSESTLIDMYAKCGNLKAAMNVFKTMKEKNIVSWNSIIAACGNHGKLKDSLCLFHEMVEK 637
Query: 549 TGMEPNHVIFLSVLSACSHSGLISQGLSIYESMTKDFRMPANLEHRACIIDLLSRAGKVD 608
+G+ P+ + FL ++S+C H G + +G+ + SMT+D+ + EH AC++DL RAG++
Sbjct: 638 SGIRPDQITFLEIISSCCHVGDVDEGVRFFRSMTEDYGIQPQQEHYACVVDLFGRAGRLT 697
Query: 609 EAYSFYKMMFKEPSIDVLGILLDACRVNGSVELGKVIARDMFELKPVDAGNFLQLVHSYA 668
EAY K M P V G LL ACR++ +VEL +V + + +L P ++G ++ + +++A
Sbjct: 698 EAYETVKSMPFPPDAGVWGTLLGACRLHKNVELAEVASSKLMDLDPSNSGYYVLISNAHA 757
Query: 669 SMSRWDGVEEAWTQMRSLGLKKLPGWSSIEVHGTSFTFFSVHNSHPKIEDIILTVKSLSN 728
+ W+ V + + M+ ++K+PG+S IE++ + F S +HP+ I + SL
Sbjct: 758 NAREWESVTKVRSLMKEREVQKIPGYSWIEINKRTHLFVSGDVNHPESSHIYSLLNSLLG 817
BLAST of Lsi06G000580.1 vs. TAIR 10
Match:
AT3G57430.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 417.2 bits (1071), Expect = 2.9e-116
Identity = 238/718 (33.15%), Postives = 409/718 (56.96%), Query Frame = 0
Query: 32 QVLQTYISFQNTNTPPDAYTFPSLLKACTNLNLFSNGLSIHQSVIVHGLSHDSY-IGSSL 91
+ + TY+ PD Y FP+LLKA +L G IH V G DS + ++L
Sbjct: 80 EAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTL 139
Query: 92 ISFYAKFGCIQFGRKVFDTMPERNVVPWTTLIGCYSRQGDIDIAFSRFKQMRESGIQPTS 151
++ Y K G KVFD + ERN V W +LI ++A F+ M + ++P+S
Sbjct: 140 VNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSS 199
Query: 152 VTFLSLLPGVSELPLL--LCLHCLIVLYGF---ESDLALSNSMVNMYGKCGRIADARSLF 211
T +S++ S LP+ L + + YG E + + N++V MYGK G++A ++ L
Sbjct: 200 FTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGELNSFIINTLVAMYGKLGKLASSKVLL 259
Query: 212 ESMDYRDIVSWNSLLSAYSKIGGIEEILQLVQGMRIEDIKPDKQTFCSALSASAIKGDLR 271
S RD+V+WN++LS+ + + E L+ ++ M +E ++PD+ T S L A + LR
Sbjct: 260 GSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLR 319
Query: 272 FGKLVHGLILKDG-LDIDQQVETALVVLYLRCRCLDLAHKVFESTTEKDVVLWTAMISGL 331
GK +H LK+G LD + V +ALV +Y C+ + +VF+ ++ + LW AMI+G
Sbjct: 320 TGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGY 379
Query: 332 VQNDCADKALGVFSQMIES-NVELSTATLASALAACAQLGCCDIGTSIHGYVLRQGIMLD 391
QN+ +AL +F M ES + ++ T+A + AC + G +IHG+V+++G+ D
Sbjct: 380 SQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRD 439
Query: 392 IPAQNSLVTMYAKCNKLEQSCSIFNKMVEKDLVSWNAIVAGHAKNGYLSKAIFFFNEM-- 451
QN+L+ MY++ K++ + IF KM ++DLV+WN ++ G+ + + A+ ++M
Sbjct: 440 RFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQN 499
Query: 452 ----------RTSLQRPDSITVTSLLQACGSAGALCQGKWIHNFVLRSSLIPCIMTETAL 511
R SL +P+SIT+ ++L +C + AL +GK IH + ++++L + +AL
Sbjct: 500 LERKVSKGASRVSL-KPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSAL 559
Query: 512 VDMYFKCGNLEIAQKCFDYMLQQDLVTWSILIAGYGFNGKGEIALRKYSEFLGTGMEPNH 571
VDMY KCG L++++K FD + Q++++TW+++I YG +G G+ A+ + G++PN
Sbjct: 560 VDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNE 619
Query: 572 VIFLSVLSACSHSGLISQGLSIYESMTKDFRMPANLEHRACIIDLLSRAGKVDEAYSFYK 631
V F+SV +ACSHSG++ +GL I+ M D+ + + +H AC++DLL RAG++ EAY
Sbjct: 620 VTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMN 679
Query: 632 MMFKE-PSIDVLGILLDACRVNGSVELGKVIARDMFELKPVDAGNFLQLVHSYASMSRWD 691
MM ++ LL A R++ ++E+G++ A+++ +L+P A +++ L + Y+S WD
Sbjct: 680 MMPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGLWD 739
Query: 692 GVEEAWTQMRSLGLKKLPGWSSIEVHGTSFTFFSVHNSHPKIEDIILTVKSLSNDIRK 729
E M+ G++K PG S IE F + +SHP+ E + +++L +RK
Sbjct: 740 KATEVRRNMKEQGVRKEPGCSWIEHGDEVHKFVAGDSSHPQSEKLSGYLETLWERMRK 796
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Q9XE98 | 1.4e-229 | 54.16 | Pentatricopeptide repeat-containing protein At4g04370 OS=Arabidopsis thaliana OX... | [more] |
Q3E6Q1 | 2.9e-121 | 32.96 | Pentatricopeptide repeat-containing protein At1g11290, chloroplastic OS=Arabidop... | [more] |
Q9C507 | 7.3e-117 | 33.14 | Putative pentatricopeptide repeat-containing protein At1g69350, mitochondrial OS... | [more] |
Q9STE1 | 8.1e-116 | 31.40 | Pentatricopeptide repeat-containing protein At4g21300 OS=Arabidopsis thaliana OX... | [more] |
Q7Y211 | 4.0e-115 | 33.15 | Pentatricopeptide repeat-containing protein At3g57430, chloroplastic OS=Arabidop... | [more] |
Match Name | E-value | Identity | Description | |
A0A1S4DUX5 | 0.0e+00 | 89.34 | pentatricopeptide repeat-containing protein At4g04370 OS=Cucumis melo OX=3656 GN... | [more] |
A0A0A0M0F8 | 0.0e+00 | 87.21 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G650050 PE=4 SV=1 | [more] |
A0A6J1E522 | 0.0e+00 | 85.66 | pentatricopeptide repeat-containing protein At4g04370 OS=Momordica charantia OX=... | [more] |
A0A6J1EZ22 | 0.0e+00 | 85.93 | pentatricopeptide repeat-containing protein At4g04370 OS=Cucurbita moschata OX=3... | [more] |
A0A5D3CX33 | 0.0e+00 | 89.44 | Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... | [more] |
Match Name | E-value | Identity | Description | |
XP_038878475.1 | 0.0e+00 | 94.20 | pentatricopeptide repeat-containing protein At4g04370 [Benincasa hispida] >XP_03... | [more] |
XP_016899786.1 | 0.0e+00 | 89.34 | PREDICTED: pentatricopeptide repeat-containing protein At4g04370 [Cucumis melo] | [more] |
XP_004139152.1 | 0.0e+00 | 87.21 | pentatricopeptide repeat-containing protein At4g04370 [Cucumis sativus] | [more] |
XP_022159804.1 | 0.0e+00 | 85.66 | pentatricopeptide repeat-containing protein At4g04370 [Momordica charantia] >XP_... | [more] |
XP_022931568.1 | 0.0e+00 | 85.93 | pentatricopeptide repeat-containing protein At4g04370 [Cucurbita moschata] >XP_0... | [more] |
Match Name | E-value | Identity | Description | |
AT4G04370.1 | 1.0e-230 | 54.16 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT1G11290.1 | 2.0e-122 | 32.96 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT1G69350.1 | 5.2e-118 | 33.14 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT4G21300.1 | 5.7e-117 | 31.40 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT3G57430.1 | 2.9e-116 | 33.15 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |