Lsi06G000580 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview
NameLsi06G000580
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
DescriptionPentatricopeptide repeat-containing protein
Locationchr06: 494961 .. 497192 (+)
RNA-Seq ExpressionLsi06G000580
SyntenyLsi06G000580
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAACAGATTAATCCATGAGCCAATAGCCCATGGCAGCACCAAATCATTTAACTCTCTCATAAATCGCCTTTCTTCTCAAGGCGCTCACCATCAAGTTCTTCAAACCTACATTTCTTTCCAAAACACCAATACCCCACCAGATGCTTACACTTTTCCCAGCCTCCTCAAAGCTTGTACCAATTTGAACTTGTTTTCAAATGGCCTCTCAATTCATCAATCTGTCATCGTTCATGGGCTTTCTCATGATTCCTATATTGGGTCTTCGCTCATTAGTTTCTATGCCAAATTTGGTTGCATTCAGTTTGGTCGCAAGGTGTTTGATACAATGCCTGAAAGAAATGTTGTTCCTTGGACCACCTTAATTGGTTGCTATTCACGGCAGGGAGACATTGACATTGCTTTTTCAAGGTTTAAACAAATGCGGGAGAGTGGTATTCAGCCCACTTCTGTCACCTTCCTGAGTCTGCTTCCTGGTGTTTCAGAGCTTCCCCTTCTTCTTTGTTTGCATTGTTTGATTGTTTTATATGGTTTTGAGTCAGACTTAGCTTTATCGAACTCCATGGTGAATATGTATGGTAAATGTGGCAGAATTGCTGATGCAAGAAGTTTGTTTGAGTCAATGGATTACAGAGACATAGTTTCTTGGAATTCACTATTATCGGCCTATTCGAAAATTGGAGGCATTGAAGAAATATTGCAGCTTGTACAAGGAATGAGGATTGAAGATATTAAACCCGACAAGCAAACTTTTTGCTCTGCATTGTCTGCTTCTGCTATAAAGGGTGATCTTCGATTTGGTAAGTTAGTGCACGGTCTGATTCTCAAAGATGGGTTAGATATAGATCAACAAGTAGAGACAGCACTCGTAGTTTTGTACTTGAGATGTAGATGTTTGGATCTCGCTCATAAAGTTTTCGAATCAACTACTGAAAAGGATGTGGTCCTGTGGACAGCAATGATATCAGGACTTGTTCAGAACGATTGTGCTGACAAGGCATTGGGGGTCTTCTCTCAAATGATCGAATCAAATGTCGAGCTGAGTACTGCTACCTTAGCTAGTGCTCTTGCAGCCTGTGCTCAACTTGGTTGTTGTGATATTGGTACCTCGATTCATGGTTATGTATTAAGGCAAGGAATAATGCTAGACATCCCTGCTCAAAACTCTCTTGTCACCATGTATGCAAAGTGTAATAAGCTGGAGCAAAGTTGTTCAATTTTTAATAAGATGGTTGAAAAGGATTTAGTTTCTTGGAATGCTATTGTGGCTGGACATGCTAAAAATGGTTATTTAAGCAAGGCCATCTTTTTCTTCAATGAAATGAGAACGAGCTTACAAAGGCCTGACTCAATAACAGTGACTTCACTTCTTCAAGCTTGTGGTTCTGCTGGTGCACTTTGCCAGGGAAAGTGGATTCACAACTTCGTTCTTAGAAGTTCCCTTATCCCGTGCATTATGACTGAAACAGCTCTAGTTGACATGTACTTCAAGTGTGGAAACTTAGAGATTGCTCAGAAGTGTTTCGATTATATGTTACAACAAGATCTTGTAACATGGAGCATCCTTATTGCTGGATATGGTTTTAATGGAAAAGGTGAAATTGCTTTGAGAAAGTATTCAGAGTTTCTTGGCACAGGGATGGAACCAAATCATGTTATTTTCCTTTCAGTTCTTTCTGCTTGTAGCCACAGTGGGCTTATTAGTCAAGGTTTGAGCATATATGAGTCAATGACTAAAGATTTCAGAATGCCAGCAAATCTCGAACACCGAGCTTGCATTATCGACCTCCTAAGTCGAGCTGGAAAGGTCGATGAGGCATATAGCTTCTATAAAATGATGTTTAAAGAACCCTCAATAGATGTTTTAGGCATACTCCTTGACGCTTGTCGTGTGAATGGCAGCGTCGAACTTGGAAAGGTTATTGCTAGAGACATGTTTGAATTAAAGCCTGTGGATGCTGGAAACTTTCTGCAATTGGTCCATAGTTATGCATCCATGAGTAGATGGGATGGAGTGGAGGAGGCATGGACCCAAATGAGATCTCTTGGTCTGAAAAAGCTTCCTGGATGGAGTTCTATTGAGGTTCATGGAACCAGTTTTACATTTTTTTCAGTTCACAATTCACATCCTAAGATTGAAGACATAATCTTGACAGTTAAATCATTGAGCAACGATATTAGAAAGATGCATGTTGAAAATGAAATTAGCGACGACTTTGTTGAAATTTCTTGA

mRNA sequence

ATGAACAGATTAATCCATGAGCCAATAGCCCATGGCAGCACCAAATCATTTAACTCTCTCATAAATCGCCTTTCTTCTCAAGGCGCTCACCATCAAGTTCTTCAAACCTACATTTCTTTCCAAAACACCAATACCCCACCAGATGCTTACACTTTTCCCAGCCTCCTCAAAGCTTGTACCAATTTGAACTTGTTTTCAAATGGCCTCTCAATTCATCAATCTGTCATCGTTCATGGGCTTTCTCATGATTCCTATATTGGGTCTTCGCTCATTAGTTTCTATGCCAAATTTGGTTGCATTCAGTTTGGTCGCAAGGTGTTTGATACAATGCCTGAAAGAAATGTTGTTCCTTGGACCACCTTAATTGGTTGCTATTCACGGCAGGGAGACATTGACATTGCTTTTTCAAGGTTTAAACAAATGCGGGAGAGTGGTATTCAGCCCACTTCTGTCACCTTCCTGAGTCTGCTTCCTGGTGTTTCAGAGCTTCCCCTTCTTCTTTGTTTGCATTGTTTGATTGTTTTATATGGTTTTGAGTCAGACTTAGCTTTATCGAACTCCATGGTGAATATGTATGGTAAATGTGGCAGAATTGCTGATGCAAGAAGTTTGTTTGAGTCAATGGATTACAGAGACATAGTTTCTTGGAATTCACTATTATCGGCCTATTCGAAAATTGGAGGCATTGAAGAAATATTGCAGCTTGTACAAGGAATGAGGATTGAAGATATTAAACCCGACAAGCAAACTTTTTGCTCTGCATTGTCTGCTTCTGCTATAAAGGGTGATCTTCGATTTGGTAAGTTAGTGCACGGTCTGATTCTCAAAGATGGGTTAGATATAGATCAACAAGTAGAGACAGCACTCGTAGTTTTGTACTTGAGATGTAGATGTTTGGATCTCGCTCATAAAGTTTTCGAATCAACTACTGAAAAGGATGTGGTCCTGTGGACAGCAATGATATCAGGACTTGTTCAGAACGATTGTGCTGACAAGGCATTGGGGGTCTTCTCTCAAATGATCGAATCAAATGTCGAGCTGAGTACTGCTACCTTAGCTAGTGCTCTTGCAGCCTGTGCTCAACTTGGTTGTTGTGATATTGGTACCTCGATTCATGGTTATGTATTAAGGCAAGGAATAATGCTAGACATCCCTGCTCAAAACTCTCTTGTCACCATGTATGCAAAGTGTAATAAGCTGGAGCAAAGTTGTTCAATTTTTAATAAGATGGTTGAAAAGGATTTAGTTTCTTGGAATGCTATTGTGGCTGGACATGCTAAAAATGGTTATTTAAGCAAGGCCATCTTTTTCTTCAATGAAATGAGAACGAGCTTACAAAGGCCTGACTCAATAACAGTGACTTCACTTCTTCAAGCTTGTGGTTCTGCTGGTGCACTTTGCCAGGGAAAGTGGATTCACAACTTCGTTCTTAGAAGTTCCCTTATCCCGTGCATTATGACTGAAACAGCTCTAGTTGACATGTACTTCAAGTGTGGAAACTTAGAGATTGCTCAGAAGTGTTTCGATTATATGTTACAACAAGATCTTGTAACATGGAGCATCCTTATTGCTGGATATGGTTTTAATGGAAAAGGTGAAATTGCTTTGAGAAAGTATTCAGAGTTTCTTGGCACAGGGATGGAACCAAATCATGTTATTTTCCTTTCAGTTCTTTCTGCTTGTAGCCACAGTGGGCTTATTAGTCAAGGTTTGAGCATATATGAGTCAATGACTAAAGATTTCAGAATGCCAGCAAATCTCGAACACCGAGCTTGCATTATCGACCTCCTAAGTCGAGCTGGAAAGGTCGATGAGGCATATAGCTTCTATAAAATGATGTTTAAAGAACCCTCAATAGATGTTTTAGGCATACTCCTTGACGCTTGTCGTGTGAATGGCAGCGTCGAACTTGGAAAGGTTATTGCTAGAGACATGTTTGAATTAAAGCCTGTGGATGCTGGAAACTTTCTGCAATTGGTCCATAGTTATGCATCCATGAGTAGATGGGATGGAGTGGAGGAGGCATGGACCCAAATGAGATCTCTTGGTCTGAAAAAGCTTCCTGGATGGAGTTCTATTGAGGTTCATGGAACCAGTTTTACATTTTTTTCAGTTCACAATTCACATCCTAAGATTGAAGACATAATCTTGACAGTTAAATCATTGAGCAACGATATTAGAAAGATGCATGTTGAAAATGAAATTAGCGACGACTTTGTTGAAATTTCTTGA

Coding sequence (CDS)

ATGAACAGATTAATCCATGAGCCAATAGCCCATGGCAGCACCAAATCATTTAACTCTCTCATAAATCGCCTTTCTTCTCAAGGCGCTCACCATCAAGTTCTTCAAACCTACATTTCTTTCCAAAACACCAATACCCCACCAGATGCTTACACTTTTCCCAGCCTCCTCAAAGCTTGTACCAATTTGAACTTGTTTTCAAATGGCCTCTCAATTCATCAATCTGTCATCGTTCATGGGCTTTCTCATGATTCCTATATTGGGTCTTCGCTCATTAGTTTCTATGCCAAATTTGGTTGCATTCAGTTTGGTCGCAAGGTGTTTGATACAATGCCTGAAAGAAATGTTGTTCCTTGGACCACCTTAATTGGTTGCTATTCACGGCAGGGAGACATTGACATTGCTTTTTCAAGGTTTAAACAAATGCGGGAGAGTGGTATTCAGCCCACTTCTGTCACCTTCCTGAGTCTGCTTCCTGGTGTTTCAGAGCTTCCCCTTCTTCTTTGTTTGCATTGTTTGATTGTTTTATATGGTTTTGAGTCAGACTTAGCTTTATCGAACTCCATGGTGAATATGTATGGTAAATGTGGCAGAATTGCTGATGCAAGAAGTTTGTTTGAGTCAATGGATTACAGAGACATAGTTTCTTGGAATTCACTATTATCGGCCTATTCGAAAATTGGAGGCATTGAAGAAATATTGCAGCTTGTACAAGGAATGAGGATTGAAGATATTAAACCCGACAAGCAAACTTTTTGCTCTGCATTGTCTGCTTCTGCTATAAAGGGTGATCTTCGATTTGGTAAGTTAGTGCACGGTCTGATTCTCAAAGATGGGTTAGATATAGATCAACAAGTAGAGACAGCACTCGTAGTTTTGTACTTGAGATGTAGATGTTTGGATCTCGCTCATAAAGTTTTCGAATCAACTACTGAAAAGGATGTGGTCCTGTGGACAGCAATGATATCAGGACTTGTTCAGAACGATTGTGCTGACAAGGCATTGGGGGTCTTCTCTCAAATGATCGAATCAAATGTCGAGCTGAGTACTGCTACCTTAGCTAGTGCTCTTGCAGCCTGTGCTCAACTTGGTTGTTGTGATATTGGTACCTCGATTCATGGTTATGTATTAAGGCAAGGAATAATGCTAGACATCCCTGCTCAAAACTCTCTTGTCACCATGTATGCAAAGTGTAATAAGCTGGAGCAAAGTTGTTCAATTTTTAATAAGATGGTTGAAAAGGATTTAGTTTCTTGGAATGCTATTGTGGCTGGACATGCTAAAAATGGTTATTTAAGCAAGGCCATCTTTTTCTTCAATGAAATGAGAACGAGCTTACAAAGGCCTGACTCAATAACAGTGACTTCACTTCTTCAAGCTTGTGGTTCTGCTGGTGCACTTTGCCAGGGAAAGTGGATTCACAACTTCGTTCTTAGAAGTTCCCTTATCCCGTGCATTATGACTGAAACAGCTCTAGTTGACATGTACTTCAAGTGTGGAAACTTAGAGATTGCTCAGAAGTGTTTCGATTATATGTTACAACAAGATCTTGTAACATGGAGCATCCTTATTGCTGGATATGGTTTTAATGGAAAAGGTGAAATTGCTTTGAGAAAGTATTCAGAGTTTCTTGGCACAGGGATGGAACCAAATCATGTTATTTTCCTTTCAGTTCTTTCTGCTTGTAGCCACAGTGGGCTTATTAGTCAAGGTTTGAGCATATATGAGTCAATGACTAAAGATTTCAGAATGCCAGCAAATCTCGAACACCGAGCTTGCATTATCGACCTCCTAAGTCGAGCTGGAAAGGTCGATGAGGCATATAGCTTCTATAAAATGATGTTTAAAGAACCCTCAATAGATGTTTTAGGCATACTCCTTGACGCTTGTCGTGTGAATGGCAGCGTCGAACTTGGAAAGGTTATTGCTAGAGACATGTTTGAATTAAAGCCTGTGGATGCTGGAAACTTTCTGCAATTGGTCCATAGTTATGCATCCATGAGTAGATGGGATGGAGTGGAGGAGGCATGGACCCAAATGAGATCTCTTGGTCTGAAAAAGCTTCCTGGATGGAGTTCTATTGAGGTTCATGGAACCAGTTTTACATTTTTTTCAGTTCACAATTCACATCCTAAGATTGAAGACATAATCTTGACAGTTAAATCATTGAGCAACGATATTAGAAAGATGCATGTTGAAAATGAAATTAGCGACGACTTTGTTGAAATTTCTTGA

Protein sequence

MNRLIHEPIAHGSTKSFNSLINRLSSQGAHHQVLQTYISFQNTNTPPDAYTFPSLLKACTNLNLFSNGLSIHQSVIVHGLSHDSYIGSSLISFYAKFGCIQFGRKVFDTMPERNVVPWTTLIGCYSRQGDIDIAFSRFKQMRESGIQPTSVTFLSLLPGVSELPLLLCLHCLIVLYGFESDLALSNSMVNMYGKCGRIADARSLFESMDYRDIVSWNSLLSAYSKIGGIEEILQLVQGMRIEDIKPDKQTFCSALSASAIKGDLRFGKLVHGLILKDGLDIDQQVETALVVLYLRCRCLDLAHKVFESTTEKDVVLWTAMISGLVQNDCADKALGVFSQMIESNVELSTATLASALAACAQLGCCDIGTSIHGYVLRQGIMLDIPAQNSLVTMYAKCNKLEQSCSIFNKMVEKDLVSWNAIVAGHAKNGYLSKAIFFFNEMRTSLQRPDSITVTSLLQACGSAGALCQGKWIHNFVLRSSLIPCIMTETALVDMYFKCGNLEIAQKCFDYMLQQDLVTWSILIAGYGFNGKGEIALRKYSEFLGTGMEPNHVIFLSVLSACSHSGLISQGLSIYESMTKDFRMPANLEHRACIIDLLSRAGKVDEAYSFYKMMFKEPSIDVLGILLDACRVNGSVELGKVIARDMFELKPVDAGNFLQLVHSYASMSRWDGVEEAWTQMRSLGLKKLPGWSSIEVHGTSFTFFSVHNSHPKIEDIILTVKSLSNDIRKMHVENEISDDFVEIS
Homology
BLAST of Lsi06G000580 vs. ExPASy Swiss-Prot
Match: Q9XE98 (Pentatricopeptide repeat-containing protein At4g04370 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E99 PE=3 SV=1)

HSP 1 Score: 797.3 bits (2058), Expect = 1.4e-229
Identity = 391/722 (54.16%), Postives = 520/722 (72.02%), Query Frame = 0

Query: 13  STKSFNSLINRLSSQGAHHQVLQTYISFQNTNTPPDAYTFPSLLKACTNLNLFSNGLSIH 72
           STK FNS IN LSS G H QVL T+ S       PD +TFPSLLKAC +L   S GLSIH
Sbjct: 10  STKYFNSHINHLSSHGDHKQVLSTFSSMLANKLLPDTFTFPSLLKACASLQRLSFGLSIH 69

Query: 73  QSVIVHGLSHDSYIGSSLISFYAKFGCIQFGRKVFDTMPERNVVPWTTLIGCYSRQGDID 132
           Q V+V+G S D YI SSL++ YAKFG +   RKVF+ M ER+VV WT +IGCYSR G + 
Sbjct: 70  QQVLVNGFSSDFYISSSLVNLYAKFGLLAHARKVFEEMRERDVVHWTAMIGCYSRAGIVG 129

Query: 133 IAFSRFKQMRESGIQPTSVTFLSLLPGVSELPLLLCLHCLIVLYGFESDLALSNSMVNMY 192
            A S   +MR  GI+P  VT L +L GV E+  L CLH   V+YGF+ D+A+ NSM+N+Y
Sbjct: 130 EACSLVNEMRFQGIKPGPVTLLEMLSGVLEITQLQCLHDFAVIYGFDCDIAVMNSMLNLY 189

Query: 193 GKCGRIADARSLFESMDYRDIVSWNSLLSAYSKIGGIEEILQLVQGMRIEDIKPDKQTFC 252
            KC  + DA+ LF+ M+ RD+VSWN+++S Y+ +G + EIL+L+  MR + ++PD+QTF 
Sbjct: 190 CKCDHVGDAKDLFDQMEQRDMVSWNTMISGYASVGNMSEILKLLYRMRGDGLRPDQQTFG 249

Query: 253 SALSASAIKGDLRFGKLVHGLILKDGLDIDQQVETALVVLYLRCRCLDLAHKVFESTTEK 312
           ++LS S    DL  G+++H  I+K G D+D  ++TAL+ +YL+C   + +++V E+   K
Sbjct: 250 ASLSVSGTMCDLEMGRMLHCQIVKTGFDVDMHLKTALITMYLKCGKEEASYRVLETIPNK 309

Query: 313 DVVLWTAMISGLVQNDCADKALGVFSQMIESNVELSTATLASALAACAQLGCCDIGTSIH 372
           DVV WT MISGL++   A+KAL VFS+M++S  +LS+  +AS +A+CAQLG  D+G S+H
Sbjct: 310 DVVCWTVMISGLMRLGRAEKALIVFSEMLQSGSDLSSEAIASVVASCAQLGSFDLGASVH 369

Query: 373 GYVLRQGIMLDIPAQNSLVTMYAKCNKLEQSCSIFNKMVEKDLVSWNAIVAGHAKNGYLS 432
           GYVLR G  LD PA NSL+TMYAKC  L++S  IF +M E+DLVSWNAI++G+A+N  L 
Sbjct: 370 GYVLRHGYTLDTPALNSLITMYAKCGHLDKSLVIFERMNERDLVSWNAIISGYAQNVDLC 429

Query: 433 KAIFFFNEMR-TSLQRPDSITVTSLLQACGSAGALCQGKWIHNFVLRSSLIPCIMTETAL 492
           KA+  F EM+  ++Q+ DS TV SLLQAC SAGAL  GK IH  V+RS + PC + +TAL
Sbjct: 430 KALLLFEEMKFKTVQQVDSFTVVSLLQACSSAGALPVGKLIHCIVIRSFIRPCSLVDTAL 489

Query: 493 VDMYFKCGNLEIAQKCFDYMLQQDLVTWSILIAGYGFNGKGEIALRKYSEFLGTGMEPNH 552
           VDMY KCG LE AQ+CFD +  +D+V+W ILIAGYGF+GKG+IAL  YSEFL +GMEPNH
Sbjct: 490 VDMYSKCGYLEAAQRCFDSISWKDVVSWGILIAGYGFHGKGDIALEIYSEFLHSGMEPNH 549

Query: 553 VIFLSVLSACSHSGLISQGLSIYESMTKDFRMPANLEHRACIIDLLSRAGKVDEAYSFYK 612
           VIFL+VLS+CSH+G++ QGL I+ SM +DF +  N EH AC++DLL RA ++++A+ FYK
Sbjct: 550 VIFLAVLSSCSHNGMVQQGLKIFSSMVRDFGVEPNHEHLACVVDLLCRAKRIEDAFKFYK 609

Query: 613 MMFKEPSIDVLGILLDACRVNGSVELGKVIARDMFELKPVDAGNFLQLVHSYASMSRWDG 672
             F  PSIDVLGI+LDACR NG  E+  +I  DM ELKP DAG++++L HS+A+M RWD 
Sbjct: 610 ENFTRPSIDVLGIILDACRANGKTEVEDIICEDMIELKPGDAGHYVKLGHSFAAMKRWDD 669

Query: 673 VEEAWTQMRSLGLKKLPGWSSIEVHGTSFTFFSVHNSHPKIEDIILTVKSLSNDIRKMHV 732
           V E+W QMRSLGLKKLPGWS IE++G + TFF  H SH   +D +  +K LS ++ +   
Sbjct: 670 VSESWNQMRSLGLKKLPGWSKIEMNGKTTTFFMNHTSHS--DDTVSLLKLLSREMMQFGS 729

Query: 733 EN 734
            N
Sbjct: 730 NN 729

BLAST of Lsi06G000580 vs. ExPASy Swiss-Prot
Match: Q3E6Q1 (Pentatricopeptide repeat-containing protein At1g11290, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H40 PE=2 SV=1)

HSP 1 Score: 437.6 bits (1124), Expect = 2.9e-121
Identity = 234/710 (32.96%), Postives = 397/710 (55.92%), Query Frame = 0

Query: 46  PPDAYTFPS--LLKACTNLNLFSNGLSIHQSVIVHGLSHDSYIGSSLISFYAKFGCIQFG 105
           P + Y  P+  LL+ C++L      L +   V  +GL  + +  + L+S + ++G +   
Sbjct: 32  PANVYEHPAALLLERCSSLKELRQILPL---VFKNGLYQEHFFQTKLVSLFCRYGSVDEA 91

Query: 106 RKVFDTMPERNVVPWTTLIGCYSRQGDIDIAFSRFKQMRESGIQPTSVTFLSLLP---GV 165
            +VF+ +  +  V + T++  +++  D+D A   F +MR   ++P    F  LL      
Sbjct: 92  ARVFEPIDSKLNVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDE 151

Query: 166 SELPLLLCLHCLIVLYGFESDLALSNSMVNMYGKCGRIADARSLFESMDYRDIVSWNSLL 225
           +EL +   +H L+V  GF  DL     + NMY KC ++ +AR +F+ M  RD+VSWN+++
Sbjct: 152 AELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIV 211

Query: 226 SAYSKIGGIEEILQLVQGMRIEDIKPDKQTFCSALSASAIKGDLRFGKLVHGLILKDGLD 285
           + YS+ G     L++V+ M  E++KP   T  S L A +    +  GK +HG  ++ G D
Sbjct: 212 AGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFD 271

Query: 286 IDQQVETALVVLYLRCRCLDLAHKVFESTTEKDVVLWTAMISGLVQNDCADKALGVFSQM 345
               + TALV +Y +C  L+ A ++F+   E++VV W +MI   VQN+   +A+ +F +M
Sbjct: 272 SLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKM 331

Query: 346 IESNVELSTATLASALAACAQLGCCDIGTSIHGYVLRQGIMLDIPAQNSLVTMYAKCNKL 405
           ++  V+ +  ++  AL ACA LG  + G  IH   +  G+  ++   NSL++MY KC ++
Sbjct: 332 LDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEV 391

Query: 406 EQSCSIFNKMVEKDLVSWNAIVAGHAKNGYLSKAIFFFNEMRTSLQRPDSITVTSLLQAC 465
           + + S+F K+  + LVSWNA++ G A+NG    A+ +F++MR+   +PD+ T  S++ A 
Sbjct: 392 DTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAI 451

Query: 466 GSAGALCQGKWIHNFVLRSSLIPCIMTETALVDMYFKCGNLEIAQKCFDYMLQQDLVTWS 525
                    KWIH  V+RS L   +   TALVDMY KCG + IA+  FD M ++ + TW+
Sbjct: 452 AELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWN 511

Query: 526 ILIAGYGFNGKGEIALRKYSEFLGTGMEPNHVIFLSVLSACSHSGLISQGLSIYESMTKD 585
            +I GYG +G G+ AL  + E     ++PN V FLSV+SACSHSGL+  GL  +  M ++
Sbjct: 512 AMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKEN 571

Query: 586 FRMPANLEHRACIIDLLSRAGKVDEAYSFYKMMFKEPSIDVLGILLDACRVNGSVELGKV 645
           + +  +++H   ++DLL RAG+++EA+ F   M  +P+++V G +L AC+++ +V   + 
Sbjct: 572 YSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFAEK 631

Query: 646 IARDMFELKPVDAGNFLQLVHSYASMSRWDGVEEAWTQMRSLGLKKLPGWSSIEVHGTSF 705
            A  +FEL P D G  + L + Y + S W+ V +    M   GL+K PG S +E+     
Sbjct: 632 AAERLFELNPDDGGYHVLLANIYRAASMWEKVGQVRVSMLRQGLRKTPGCSMVEIKNEVH 691

Query: 706 TFFSVHNSHPKIEDIILTVKSLSNDIRK----------MHVENEISDDFV 741
           +FFS   +HP  + I   ++ L   I++          + VEN++ +  +
Sbjct: 692 SFFSGSTAHPDSKKIYAFLEKLICHIKEAGYVPDTNLVLGVENDVKEQLL 738

BLAST of Lsi06G000580 vs. ExPASy Swiss-Prot
Match: Q9C507 (Putative pentatricopeptide repeat-containing protein At1g69350, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-E66 PE=3 SV=1)

HSP 1 Score: 422.9 bits (1086), Expect = 7.3e-117
Identity = 233/703 (33.14%), Postives = 393/703 (55.90%), Query Frame = 0

Query: 34  LQTYISFQNTNTPPDAYTFPSLLKACT-NLNLFSNGLSIHQSVIVHGLSHDSYIGSSLIS 93
           +  Y    +  T    + FPS+L+AC  +    S G  +H  +I  G+  D+ I +SL+ 
Sbjct: 85  IDLYHRLVSETTQISKFVFPSVLRACAGSREHLSVGGKVHGRIIKGGVDDDAVIETSLLC 144

Query: 94  FYAKFGCIQFGRKVFDTMPERNVVPWTTLIGCYSRQGDIDIAFSRFKQMRESGIQPTSVT 153
            Y + G +    KVFD MP R++V W+TL+      G++  A   FK M + G++P +VT
Sbjct: 145 MYGQTGNLSDAEKVFDGMPVRDLVAWSTLVSSCLENGEVVKALRMFKCMVDDGVEPDAVT 204

Query: 154 FLSLLPGVSELPLL---LCLHCLIVLYGFESDLALSNSMVNMYGKCGRIADARSLFESMD 213
            +S++ G +EL  L     +H  I    F+ D  L NS++ MY KCG +  +  +FE + 
Sbjct: 205 MISVVEGCAELGCLRIARSVHGQITRKMFDLDETLCNSLLTMYSKCGDLLSSERIFEKIA 264

Query: 214 YRDIVSWNSLLSAYSKIGGIEEILQLVQGMRIEDIKPDKQTFCSALSASAIKGDLRFGKL 273
            ++ VSW +++S+Y++    E+ L+    M    I+P+  T  S LS+  + G +R GK 
Sbjct: 265 KKNAVSWTAMISSYNRGEFSEKALRSFSEMIKSGIEPNLVTLYSVLSSCGLIGLIREGKS 324

Query: 274 VHGLILKDGLDID-QQVETALVVLYLRCRCLDLAHKVFESTTEKDVVLWTAMISGLVQND 333
           VHG  ++  LD + + +  ALV LY  C  L     V    +++++V W ++IS      
Sbjct: 325 VHGFAVRRELDPNYESLSLALVELYAECGKLSDCETVLRVVSDRNIVAWNSLISLYAHRG 384

Query: 334 CADKALGVFSQMIESNVELSTATLASALAACAQLGCCDIGTSIHGYVLRQGIMLDIPAQN 393
              +ALG+F QM+   ++    TLAS+++AC   G   +G  IHG+V+R  +  D   QN
Sbjct: 385 MVIQALGLFRQMVTQRIKPDAFTLASSISACENAGLVPLGKQIHGHVIRTDVS-DEFVQN 444

Query: 394 SLVTMYAKCNKLEQSCSIFNKMVEKDLVSWNAIVAGHAKNGYLSKAIFFFNEMRTSLQRP 453
           SL+ MY+K   ++ + ++FN++  + +V+WN+++ G ++NG   +AI  F+ M  S    
Sbjct: 445 SLIDMYSKSGSVDSASTVFNQIKHRSVVTWNSMLCGFSQNGNSVEAISLFDYMYHSYLEM 504

Query: 454 DSITVTSLLQACGSAGALCQGKWIHNFVLRSSLIPCIMTETALVDMYFKCGNLEIAQKCF 513
           + +T  +++QAC S G+L +GKW+H+ ++ S L   + T+TAL+DMY KCG+L  A+  F
Sbjct: 505 NEVTFLAVIQACSSIGSLEKGKWVHHKLIISGL-KDLFTDTALIDMYAKCGDLNAAETVF 564

Query: 514 DYMLQQDLVTWSILIAGYGFNGKGEIALRKYSEFLGTGMEPNHVIFLSVLSACSHSGLIS 573
             M  + +V+WS +I  YG +G+   A+  +++ + +G +PN V+F++VLSAC HSG + 
Sbjct: 565 RAMSSRSIVSWSSMINAYGMHGRIGSAISTFNQMVESGTKPNEVVFMNVLSACGHSGSVE 624

Query: 574 QGLSIYESMTKDFRMPANLEHRACIIDLLSRAGKVDEAYSFYKMMFKEPSIDVLGILLDA 633
           +G   Y ++ K F +  N EH AC IDLLSR+G + EAY   K M       V G L++ 
Sbjct: 625 EG-KYYFNLMKSFGVSPNSEHFACFIDLLSRSGDLKEAYRTIKEMPFLADASVWGSLVNG 684

Query: 634 CRVNGSVELGKVIARDMFELKPVDAGNFLQLVHSYASMSRWDGVEEAWTQMRSLGLKKLP 693
           CR++  +++ K I  D+ ++   D G +  L + YA    W+      + M+S  LKK+P
Sbjct: 685 CRIHQKMDIIKAIKNDLSDIVTDDTGYYTLLSNIYAEEGEWEEFRRLRSAMKSSNLKKVP 744

Query: 694 GWSSIEVHGTSFTFFSVHNSHPKIEDIILTVKSLSNDIRKMHV 732
           G+S+IE+    F F +   +  + ++I   + +L N   + HV
Sbjct: 745 GYSAIEIDQKVFRFGAGEENRIQTDEIYRFLGNLQNLTNEEHV 784

BLAST of Lsi06G000580 vs. ExPASy Swiss-Prot
Match: Q9STE1 (Pentatricopeptide repeat-containing protein At4g21300 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E36 PE=3 SV=1)

HSP 1 Score: 419.5 bits (1077), Expect = 8.1e-116
Identity = 227/723 (31.40%), Postives = 398/723 (55.05%), Query Frame = 0

Query: 9   IAHGSTKSFNSLINRLSSQGAHHQVLQTYISFQNTNTPPDAYTFPSLLKACTNLNLFSNG 68
           +   S + +NS+I+     G  +Q L  Y         PD  TFP L+KAC  L  F   
Sbjct: 98  LRRSSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFKGI 157

Query: 69  LSIHQSVIVHGLSHDSYIGSSLISFYAKFGCIQFGRKVFDTMPERNVVPWTTLIGCYSRQ 128
             +  +V   G+  + ++ SSLI  Y ++G I    K+FD + +++ V W  ++  Y++ 
Sbjct: 158 DFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKC 217

Query: 129 GDIDIAFSRFKQMRESGIQPTSVTF---LSLLPGVSELPLLLCLHCLIVLYGFESDLALS 188
           G +D     F  MR   I P +VTF   LS+      + L + LH L+V+ G + + ++ 
Sbjct: 218 GALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIK 277

Query: 189 NSMVNMYGKCGRIADARSLFESMDYRDIVSWNSLLSAYSKIGGIEEILQLVQGMRIEDIK 248
           NS+++MY KCGR  DA  LF  M   D V+WN ++S Y + G +EE L     M    + 
Sbjct: 278 NSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVL 337

Query: 249 PDKQTFCSALSASAIKGDLRFGKLVHGLILKDGLDIDQQVETALVVLYLRCRCLDLAHKV 308
           PD  TF S L + +   +L + K +H  I++  + +D  + +AL+  Y +CR + +A  +
Sbjct: 338 PDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNI 397

Query: 309 FESTTEKDVVLWTAMISGLVQNDCADKALGVFSQMIESNVELSTATLASALAACAQLGCC 368
           F      DVV++TAMISG + N     +L +F  +++  +  +  TL S L     L   
Sbjct: 398 FSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLAL 457

Query: 369 DIGTSIHGYVLRQGIMLDIPAQNSLVTMYAKCNKLEQSCSIFNKMVEKDLVSWNAIVAGH 428
            +G  +HG+++++G         +++ MYAKC ++  +  IF ++ ++D+VSWN+++   
Sbjct: 458 KLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIVSWNSMITRC 517

Query: 429 AKNGYLSKAIFFFNEMRTSLQRPDSITVTSLLQACGSAGALCQGKWIHNFVLRSSLIPCI 488
           A++   S AI  F +M  S    D +++++ L AC +  +   GK IH F+++ SL   +
Sbjct: 518 AQSDNPSAAIDIFRQMGVSGICYDCVSISAALSACANLPSESFGKAIHGFMIKHSLASDV 577

Query: 489 MTETALVDMYFKCGNLEIAQKCFDYMLQQDLVTWSILIAGYGFNGKGEIALRKYSEFL-G 548
            +E+ L+DMY KCGNL+ A   F  M ++++V+W+ +IA  G +GK + +L  + E +  
Sbjct: 578 YSESTLIDMYAKCGNLKAAMNVFKTMKEKNIVSWNSIIAACGNHGKLKDSLCLFHEMVEK 637

Query: 549 TGMEPNHVIFLSVLSACSHSGLISQGLSIYESMTKDFRMPANLEHRACIIDLLSRAGKVD 608
           +G+ P+ + FL ++S+C H G + +G+  + SMT+D+ +    EH AC++DL  RAG++ 
Sbjct: 638 SGIRPDQITFLEIISSCCHVGDVDEGVRFFRSMTEDYGIQPQQEHYACVVDLFGRAGRLT 697

Query: 609 EAYSFYKMMFKEPSIDVLGILLDACRVNGSVELGKVIARDMFELKPVDAGNFLQLVHSYA 668
           EAY   K M   P   V G LL ACR++ +VEL +V +  + +L P ++G ++ + +++A
Sbjct: 698 EAYETVKSMPFPPDAGVWGTLLGACRLHKNVELAEVASSKLMDLDPSNSGYYVLISNAHA 757

Query: 669 SMSRWDGVEEAWTQMRSLGLKKLPGWSSIEVHGTSFTFFSVHNSHPKIEDIILTVKSLSN 728
           +   W+ V +  + M+   ++K+PG+S IE++  +  F S   +HP+   I   + SL  
Sbjct: 758 NAREWESVTKVRSLMKEREVQKIPGYSWIEINKRTHLFVSGDVNHPESSHIYSLLNSLLG 817

BLAST of Lsi06G000580 vs. ExPASy Swiss-Prot
Match: Q7Y211 (Pentatricopeptide repeat-containing protein At3g57430, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H81 PE=2 SV=2)

HSP 1 Score: 417.2 bits (1071), Expect = 4.0e-115
Identity = 238/718 (33.15%), Postives = 409/718 (56.96%), Query Frame = 0

Query: 32  QVLQTYISFQNTNTPPDAYTFPSLLKACTNLNLFSNGLSIHQSVIVHGLSHDSY-IGSSL 91
           + + TY+        PD Y FP+LLKA  +L     G  IH  V   G   DS  + ++L
Sbjct: 80  EAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTL 139

Query: 92  ISFYAKFGCIQFGRKVFDTMPERNVVPWTTLIGCYSRQGDIDIAFSRFKQMRESGIQPTS 151
           ++ Y K G      KVFD + ERN V W +LI         ++A   F+ M +  ++P+S
Sbjct: 140 VNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSS 199

Query: 152 VTFLSLLPGVSELPLL--LCLHCLIVLYGF---ESDLALSNSMVNMYGKCGRIADARSLF 211
            T +S++   S LP+   L +   +  YG    E +  + N++V MYGK G++A ++ L 
Sbjct: 200 FTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGELNSFIINTLVAMYGKLGKLASSKVLL 259

Query: 212 ESMDYRDIVSWNSLLSAYSKIGGIEEILQLVQGMRIEDIKPDKQTFCSALSASAIKGDLR 271
            S   RD+V+WN++LS+  +   + E L+ ++ M +E ++PD+ T  S L A +    LR
Sbjct: 260 GSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLR 319

Query: 272 FGKLVHGLILKDG-LDIDQQVETALVVLYLRCRCLDLAHKVFESTTEKDVVLWTAMISGL 331
            GK +H   LK+G LD +  V +ALV +Y  C+ +    +VF+   ++ + LW AMI+G 
Sbjct: 320 TGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGY 379

Query: 332 VQNDCADKALGVFSQMIES-NVELSTATLASALAACAQLGCCDIGTSIHGYVLRQGIMLD 391
            QN+   +AL +F  M ES  +  ++ T+A  + AC + G      +IHG+V+++G+  D
Sbjct: 380 SQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRD 439

Query: 392 IPAQNSLVTMYAKCNKLEQSCSIFNKMVEKDLVSWNAIVAGHAKNGYLSKAIFFFNEM-- 451
              QN+L+ MY++  K++ +  IF KM ++DLV+WN ++ G+  + +   A+   ++M  
Sbjct: 440 RFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQN 499

Query: 452 ----------RTSLQRPDSITVTSLLQACGSAGALCQGKWIHNFVLRSSLIPCIMTETAL 511
                     R SL +P+SIT+ ++L +C +  AL +GK IH + ++++L   +   +AL
Sbjct: 500 LERKVSKGASRVSL-KPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSAL 559

Query: 512 VDMYFKCGNLEIAQKCFDYMLQQDLVTWSILIAGYGFNGKGEIALRKYSEFLGTGMEPNH 571
           VDMY KCG L++++K FD + Q++++TW+++I  YG +G G+ A+      +  G++PN 
Sbjct: 560 VDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNE 619

Query: 572 VIFLSVLSACSHSGLISQGLSIYESMTKDFRMPANLEHRACIIDLLSRAGKVDEAYSFYK 631
           V F+SV +ACSHSG++ +GL I+  M  D+ +  + +H AC++DLL RAG++ EAY    
Sbjct: 620 VTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMN 679

Query: 632 MMFKE-PSIDVLGILLDACRVNGSVELGKVIARDMFELKPVDAGNFLQLVHSYASMSRWD 691
           MM ++         LL A R++ ++E+G++ A+++ +L+P  A +++ L + Y+S   WD
Sbjct: 680 MMPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGLWD 739

Query: 692 GVEEAWTQMRSLGLKKLPGWSSIEVHGTSFTFFSVHNSHPKIEDIILTVKSLSNDIRK 729
              E    M+  G++K PG S IE       F +  +SHP+ E +   +++L   +RK
Sbjct: 740 KATEVRRNMKEQGVRKEPGCSWIEHGDEVHKFVAGDSSHPQSEKLSGYLETLWERMRK 796

BLAST of Lsi06G000580 vs. ExPASy TrEMBL
Match: A0A1S4DUX5 (pentatricopeptide repeat-containing protein At4g04370 OS=Cucumis melo OX=3656 GN=LOC103487188 PE=4 SV=1)

HSP 1 Score: 1346.6 bits (3484), Expect = 0.0e+00
Identity = 662/741 (89.34%), Postives = 703/741 (94.87%), Query Frame = 0

Query: 1   MNRLIHEPIAHGSTKSFNSLINRLSSQGAHHQVLQTYISFQNTNTPPDAYTFPSLLKACT 60
           M+RLIHE IAHGSTKSFNSL++RLSSQGAHHQVLQTYIS Q T+TP DAYTFPSL KACT
Sbjct: 1   MSRLIHESIAHGSTKSFNSLVSRLSSQGAHHQVLQTYISMQKTHTPSDAYTFPSLFKACT 60

Query: 61  NLNLFSNGLSIHQSVIVHGLSHDSYIGSSLISFYAKFGCIQFGRKVFDTMPERNVVPWTT 120
           NLNLFS+GLS+HQSV+V+GLSHDSYIGSSLISFYAKFGCI  GRKVFDTM +RNVVPWTT
Sbjct: 61  NLNLFSHGLSLHQSVVVNGLSHDSYIGSSLISFYAKFGCIHLGRKVFDTMLKRNVVPWTT 120

Query: 121 LIGCYSRQGDIDIAFSRFKQMRESGIQPTSVTFLSLLPGVSELPLLLCLHCLIVLYGFES 180
           +IG YSR+GDIDIAFS FKQMRESGIQPTSVT LSLLPG+S+LPLLLCLHCLI LYGFES
Sbjct: 121 IIGSYSREGDIDIAFSMFKQMRESGIQPTSVTLLSLLPGISKLPLLLCLHCLIFLYGFES 180

Query: 181 DLALSNSMVNMYGKCGRIADARSLFESMDYRDIVSWNSLLSAYSKIGGIEEILQLVQGMR 240
           DLALSNSMVNMYGKCGRIADARSLFES+DYRDIVSWNSLLSAYSKIG  EEILQLVQ M+
Sbjct: 181 DLALSNSMVNMYGKCGRIADARSLFESIDYRDIVSWNSLLSAYSKIGATEEILQLVQAMK 240

Query: 241 IEDIKPDKQTFCSALSASAIKGDLRFGKLVHGLILKDGLDIDQQVETALVVLYLRCRCLD 300
           IEDIKPDKQTFCSALSASAIKGDLR GKLVHGL+LKDGL+IDQ VE+ALVVLYLRCRCLD
Sbjct: 241 IEDIKPDKQTFCSALSASAIKGDLRLGKLVHGLMLKDGLNIDQHVESALVVLYLRCRCLD 300

Query: 301 LAHKVFESTTEKDVVLWTAMISGLVQNDCADKALGVFSQMIESNVELSTATLASALAACA 360
           LAHKVF+STTEKDVV+WTAMISGLVQNDCADKALGVF QMIESNV+ STATLASALAACA
Sbjct: 301 LAHKVFKSTTEKDVVMWTAMISGLVQNDCADKALGVFYQMIESNVQPSTATLASALAACA 360

Query: 361 QLGCCDIGTSIHGYVLRQGIMLDIPAQNSLVTMYAKCNKLEQSCSIFNKMVEKDLVSWNA 420
           QLGCCDIG SIHGYVLRQGIMLDIPAQNSLVTMYAKCNKL+QSCSIFNKMVEKD+VSWNA
Sbjct: 361 QLGCCDIGASIHGYVLRQGIMLDIPAQNSLVTMYAKCNKLQQSCSIFNKMVEKDVVSWNA 420

Query: 421 IVAGHAKNGYLSKAIFFFNEMRTSLQRPDSITVTSLLQACGSAGALCQGKWIHNFVLRSS 480
           IVAG+AKNGYLSKAIFFFNEMRTS QRPDSITVTSLLQACGSAGALCQGKWIHNFVLRSS
Sbjct: 421 IVAGNAKNGYLSKAIFFFNEMRTSFQRPDSITVTSLLQACGSAGALCQGKWIHNFVLRSS 480

Query: 481 LIPCIMTETALVDMYFKCGNLEIAQKCFDYMLQQDLVTWSILIAGYGFNGKGEIALRKYS 540
           LIPCIMTETALVDMYFKCGNLE AQKCFD M Q+DLV WS LI GYGFNGKGEIALRKYS
Sbjct: 481 LIPCIMTETALVDMYFKCGNLENAQKCFDCMSQRDLVAWSTLIVGYGFNGKGEIALRKYS 540

Query: 541 EFLGTGMEPNHVIFLSVLSACSHSGLISQGLSIYESMTKDFRMPANLEHRACIIDLLSRA 600
           EFLGTGMEPNHVIF+SVLSACSHSGLISQGLSIYESMTKDFRMP NLEHRACI+DLLSRA
Sbjct: 541 EFLGTGMEPNHVIFISVLSACSHSGLISQGLSIYESMTKDFRMPPNLEHRACIVDLLSRA 600

Query: 601 GKVDEAYSFYKMMFKEPSIDVLGILLDACRVNGSVELGKVIARDMFELKPVDAGNFLQLV 660
           GKVDEAYSFYKMMFKEPS+ VLG LLDACRVNGSVELGKVIARDMFELKPVD GNF+QL 
Sbjct: 601 GKVDEAYSFYKMMFKEPSMVVLGTLLDACRVNGSVELGKVIARDMFELKPVDPGNFVQLA 660

Query: 661 HSYASMSRWDGVEEAWTQMRSLGLKKLPGWSSIEVHGTSFTFFSVHNSHPKIEDIILTVK 720
           +SYASM+RWDGVE+AWTQMRSLGLKK PGWSSIE+HGT+FTFF+ HNSHPKIE IILTVK
Sbjct: 661 NSYASMNRWDGVEKAWTQMRSLGLKKFPGWSSIELHGTTFTFFAAHNSHPKIEKIILTVK 720

Query: 721 SLSNDIRKMHVENEISDDFVE 742
           +LS DIR ++++NEI +DFVE
Sbjct: 721 ALSKDIRNLYIKNEICEDFVE 741

BLAST of Lsi06G000580 vs. ExPASy TrEMBL
Match: A0A0A0M0F8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G650050 PE=4 SV=1)

HSP 1 Score: 1313.1 bits (3397), Expect = 0.0e+00
Identity = 648/743 (87.21%), Postives = 692/743 (93.14%), Query Frame = 0

Query: 1   MNRLIHEPIAHGSTKSFNSLINRLSSQGAHHQVLQTYISFQNTNTPPDAYTFPSLLKACT 60
           M+  IHE IAHG TKSFNSL++RLS QGAHHQVLQTYIS Q T+T  DAYTFPSL KACT
Sbjct: 1   MSGFIHESIAHGCTKSFNSLVSRLSYQGAHHQVLQTYISMQKTHTQLDAYTFPSLFKACT 60

Query: 61  NLNLFSNGLSIHQSVIVHGLSHDSYIGSSLISFYAKFGCIQFGRKVFDTMPERNVVPWTT 120
           NLNLFS+GLS+HQSV+V+GLSHDSYIGSSLISFYAKFGCI  GRKVFDTM +RNVVPWTT
Sbjct: 61  NLNLFSHGLSLHQSVVVNGLSHDSYIGSSLISFYAKFGCIHLGRKVFDTMLKRNVVPWTT 120

Query: 121 LIGCYSRQGDIDIAFSRFKQMRESGIQPTSVTFLSLLPGVSELPLLLCLHCLIVLYGFES 180
           +IG YSR+GDIDIAFS FKQMRESGIQPTSVT LSLLPG+S+LPLLLCLHCLI+L+GFES
Sbjct: 121 IIGSYSREGDIDIAFSMFKQMRESGIQPTSVTLLSLLPGISKLPLLLCLHCLIILHGFES 180

Query: 181 DLALSNSMVNMYGKCGRIADARSLFESMDYRDIVSWNSLLSAYSKIGGIEEILQLVQGMR 240
           DLALSNSMVNMYGKCGRIADAR LF+S+D RDIVSWNSLLSAYSKIG  EEILQL+Q M+
Sbjct: 181 DLALSNSMVNMYGKCGRIADARRLFQSIDCRDIVSWNSLLSAYSKIGATEEILQLLQAMK 240

Query: 241 IEDIKPDKQTFCSALSASAIKGDLRFGKLVHGLILKDGLDIDQQVETALVVLYLRCRCLD 300
           IEDIKPDKQTFCSALSASAIKGDLR GKLVHGL+LKDGL+IDQ VE+ALVVLYLRCRCLD
Sbjct: 241 IEDIKPDKQTFCSALSASAIKGDLRLGKLVHGLMLKDGLNIDQHVESALVVLYLRCRCLD 300

Query: 301 LAHKVFESTTEKDVVLWTAMISGLVQNDCADKALGVFSQMIESNVELSTATLASALAACA 360
            A+KVF+STTEKDVV+WTAMISGLVQNDCADKALGVF QMIESNV+ STATLAS LAACA
Sbjct: 301 PAYKVFKSTTEKDVVMWTAMISGLVQNDCADKALGVFYQMIESNVKPSTATLASGLAACA 360

Query: 361 QLGCCDIGTSIHGYVLRQGIMLDIPAQNSLVTMYAKCNKLEQSCSIFNKMVEKDLVSWNA 420
           QLGCCDIG SIHGYVLRQGIMLDIPAQNSLVTMYAKCNKL+QSCSIFNKMVEKDLVSWNA
Sbjct: 361 QLGCCDIGASIHGYVLRQGIMLDIPAQNSLVTMYAKCNKLQQSCSIFNKMVEKDLVSWNA 420

Query: 421 IVAGHAKNGYLSKAIFFFNEMRTSLQRPDSITVTSLLQACGSAGALCQGKWIHNFVLRSS 480
           IVAGHAKNGYLSK IFFFNEMR S  RPDSITVTSLLQACGSAGALCQGKWIHNFVLRSS
Sbjct: 421 IVAGHAKNGYLSKGIFFFNEMRKSFLRPDSITVTSLLQACGSAGALCQGKWIHNFVLRSS 480

Query: 481 LIPCIMTETALVDMYFKCGNLEIAQKCFDYMLQQDLVTWSILIAGYGFNGKGEIALRKYS 540
           LIPCIMTETALVDMYFKCGNLE AQKCFD MLQ+DLV WS LI GYGFNGKGEIALRKYS
Sbjct: 481 LIPCIMTETALVDMYFKCGNLENAQKCFDCMLQRDLVAWSTLIVGYGFNGKGEIALRKYS 540

Query: 541 EFLGTGMEPNHVIFLSVLSACSHSGLISQGLSIYESMTKDFRMPANLEHRACIIDLLSRA 600
           EFLGTGMEPNHVIF+SVLSACSH GLIS+GLSIYESMTKDFRM  NLEHRAC++DLLSRA
Sbjct: 541 EFLGTGMEPNHVIFISVLSACSHGGLISKGLSIYESMTKDFRMSPNLEHRACVVDLLSRA 600

Query: 601 GKVDEAYSFYKMMFKEPSIDVLGILLDACRVNGSVELGKVIARDMFELKPVDAGNFLQLV 660
           GKVDEAYSFYKMMFKEPSI VLG+LLDACRVNG VELGKVIARDMFELKPVD GNF+QL 
Sbjct: 601 GKVDEAYSFYKMMFKEPSIVVLGMLLDACRVNGRVELGKVIARDMFELKPVDPGNFVQLA 660

Query: 661 HSYASMSRWDGVEEAWTQMRSLGLKKLPGWSSIEVHGTSFTFFSVHNSHPKIEDIILTVK 720
           +SYASMSRWDGVE+AWTQMRSLGLKK PGWSSIEVHGT+FTFF+ HNSHPKIE IILTVK
Sbjct: 661 NSYASMSRWDGVEKAWTQMRSLGLKKYPGWSSIEVHGTTFTFFASHNSHPKIEKIILTVK 720

Query: 721 SLSNDIRKMHVENEISDDFVEIS 744
           +LS +IR ++V+NEI +DFVE S
Sbjct: 721 ALSKNIRNLYVKNEICEDFVEYS 743

BLAST of Lsi06G000580 vs. ExPASy TrEMBL
Match: A0A6J1E522 (pentatricopeptide repeat-containing protein At4g04370 OS=Momordica charantia OX=3673 GN=LOC111026115 PE=4 SV=1)

HSP 1 Score: 1299.6 bits (3362), Expect = 0.0e+00
Identity = 639/746 (85.66%), Postives = 689/746 (92.36%), Query Frame = 0

Query: 1   MNRLIH-------EPIAHGSTKSFNSLINRLSSQGAHHQVLQTYISFQNTNTPPDAYTFP 60
           MNRLIH        PIA+GSTKSFNS+INRLSSQGAHHQVLQTY S Q T+TPPDAYTFP
Sbjct: 1   MNRLIHGLKPPCPPPIANGSTKSFNSIINRLSSQGAHHQVLQTYASMQKTSTPPDAYTFP 60

Query: 61  SLLKACTNLNLFSNGLSIHQSVIVHGLSHDSYIGSSLISFYAKFGCIQFGRKVFDTMPER 120
           SLLKACT LNLF +GLS+HQS+IV+G S DSYIGSSLISFYAKFGCI  GRKVFD MPER
Sbjct: 61  SLLKACTILNLFLDGLSLHQSIIVNGFSLDSYIGSSLISFYAKFGCIDIGRKVFDIMPER 120

Query: 121 NVVPWTTLIGCYSRQGDIDIAFSRFKQMRESGIQPTSVTFLSLLPGVSELPLLLCLHCLI 180
           NVVPWTT+IGCYSR+G+ID+AFS FKQMR +GIQPTSVT LSLLP +SELPLL CLHC I
Sbjct: 121 NVVPWTTIIGCYSREGEIDVAFSMFKQMRATGIQPTSVTLLSLLPSISELPLLQCLHCWI 180

Query: 181 VLYGFESDLALSNSMVNMYGKCGRIADARSLFESMDYRDIVSWNSLLSAYSKIGGIEEIL 240
           +LYGFES+L+LSNSMVN+YG+CG I DARSLFESMDYRDIVSWNSLLSAYSKIG IEEIL
Sbjct: 181 ILYGFESNLSLSNSMVNVYGRCGSIEDARSLFESMDYRDIVSWNSLLSAYSKIGVIEEIL 240

Query: 241 QLVQGMRIEDIKPDKQTFCSALSASAIKGDLRFGKLVHGLILKDGLDIDQQVETALVVLY 300
           QLV GMR EDIKPDKQTFCSALSASAIKGD+R GKLVHGLI+KDGL IDQQVETAL+VLY
Sbjct: 241 QLVLGMRTEDIKPDKQTFCSALSASAIKGDIRLGKLVHGLIIKDGLGIDQQVETALMVLY 300

Query: 301 LRCRCLDLAHKVFESTTEKDVVLWTAMISGLVQNDCADKALGVFSQMIESNVELSTATLA 360
           LRC+ LDLA KVF+STTEKD+VLWTAMISGLVQNDCADKAL VF QM+ESN+E  TATLA
Sbjct: 301 LRCKSLDLALKVFKSTTEKDMVLWTAMISGLVQNDCADKALRVFYQMLESNMEPGTATLA 360

Query: 361 SALAACAQLGCCDIGTSIHGYVLRQGIMLDIPAQNSLVTMYAKCNKLEQSCSIFNKMVEK 420
           SALAACAQLGC DIGT IHGY+LRQGIMLDIPAQN+LVTMYAKCN+LEQSC IFNKMVE+
Sbjct: 361 SALAACAQLGCYDIGTLIHGYILRQGIMLDIPAQNALVTMYAKCNRLEQSCGIFNKMVER 420

Query: 421 DLVSWNAIVAGHAKNGYLSKAIFFFNEMRTSLQRPDSITVTSLLQACGSAGALCQGKWIH 480
           DLVSWNAIVAGHAKNGYLSKAI FFNEMRTSLQRPDSITVTSLLQACGSAGAL QGKWIH
Sbjct: 421 DLVSWNAIVAGHAKNGYLSKAILFFNEMRTSLQRPDSITVTSLLQACGSAGALWQGKWIH 480

Query: 481 NFVLRSSLIPCIMTETALVDMYFKCGNLEIAQKCFDYMLQQDLVTWSILIAGYGFNGKGE 540
           NFV RSSL+PCIM ETAL+DMYFKCGNLEIAQKCFDYM  QDLVTWS LI+GYGFNG GE
Sbjct: 481 NFVFRSSLMPCIMIETALIDMYFKCGNLEIAQKCFDYMPHQDLVTWSTLISGYGFNGNGE 540

Query: 541 IALRKYSEFLGTGMEPNHVIFLSVLSACSHSGLISQGLSIYESMTKDFRMPANLEHRACI 600
           IALRKYSEFLGTG+EPNHVIFLSVLSACSHSGL++QGL IYESMT+DF MP NLEHRACI
Sbjct: 541 IALRKYSEFLGTGLEPNHVIFLSVLSACSHSGLVNQGLRIYESMTRDFLMPPNLEHRACI 600

Query: 601 IDLLSRAGKVDEAYSFYKMMFKEPSIDVLGILLDACRVNGSVELGKVIARDMFELKPVDA 660
           +DLLSRAGKV+EAYSFYKMMF+EPSIDVLGILLDACRVNGSVELG+ IARD+F LKPVD 
Sbjct: 601 VDLLSRAGKVEEAYSFYKMMFQEPSIDVLGILLDACRVNGSVELGEAIARDIFALKPVDP 660

Query: 661 GNFLQLVHSYASMSRWDGVEEAWTQMRSLGLKKLPGWSSIEVHGTSFTFFSVHNSHPKIE 720
           GN++QL HSYASM RWDGVEEAWTQMRSLGLKKLPGWSSIEVHGTSF+F+SVHNSHPKIE
Sbjct: 661 GNYVQLAHSYASMGRWDGVEEAWTQMRSLGLKKLPGWSSIEVHGTSFSFYSVHNSHPKIE 720

Query: 721 DIILTVKSLSNDIRKMHVENEISDDF 740
           +I+LTVKSLSNDIRKMH+ENEI+ DF
Sbjct: 721 EIMLTVKSLSNDIRKMHIENEINKDF 746

BLAST of Lsi06G000580 vs. ExPASy TrEMBL
Match: A0A6J1EZ22 (pentatricopeptide repeat-containing protein At4g04370 OS=Cucurbita moschata OX=3662 GN=LOC111437743 PE=4 SV=1)

HSP 1 Score: 1280.8 bits (3313), Expect = 0.0e+00
Identity = 635/739 (85.93%), Postives = 677/739 (91.61%), Query Frame = 0

Query: 1   MNRLIHEPIAHGSTKSFNSLINRLSSQGAHHQVLQTYISFQNTNTPPDAYTFPSLLKACT 60
           MNRLIHE I HGSTKSFN+LINRLSSQ AHHQVLQTYIS  NTNTPPDAYTFPSLLKACT
Sbjct: 1   MNRLIHESITHGSTKSFNALINRLSSQAAHHQVLQTYISMLNTNTPPDAYTFPSLLKACT 60

Query: 61  NLNLFSNGLSIHQSVIVHGLSHDSYIGSSLISFYAKFGCIQFGRKVFDTMPERNVVPWTT 120
            LN FSNGLSIHQSVIV+GLSHDSYIGSSLISFYAKFGCI  GRKVFDTMPERNVVPWT 
Sbjct: 61  LLNSFSNGLSIHQSVIVNGLSHDSYIGSSLISFYAKFGCIHLGRKVFDTMPERNVVPWTA 120

Query: 121 LIGCYSRQGDIDIAFSRFKQMRESGIQPTSVTFLSLLPGVSELPLLLCLHCLIVLYGFES 180
           +IGCYSRQGD+ IAF+ FKQMRE+ I PTSVTFLSLLPG+SELPLL  LHCLIVLYGF S
Sbjct: 121 IIGCYSRQGDVGIAFTMFKQMRENEIHPTSVTFLSLLPGISELPLLQGLHCLIVLYGFGS 180

Query: 181 DLALSNSMVNMYGKCGRIADARSLFESMDYRDIVSWNSLLSAYSKIGGIEEILQLVQGMR 240
           DLALSNSMV+MYG+CG +  A SLFESMD RDIVSWNSLLSAYSKI GIEEILQLV  MR
Sbjct: 181 DLALSNSMVSMYGRCGSVDYATSLFESMDSRDIVSWNSLLSAYSKIVGIEEILQLVHSMR 240

Query: 241 IEDIKPDKQTFCSALSASAIKGDLRFGKLVHGLILKDGLDIDQQVETALVVLYLRCRCLD 300
           IE IKPDK+TFCS LSASA K D+R GKLVHGL+LK GLD+DQQVET LVVLYL+C CLD
Sbjct: 241 IEGIKPDKRTFCSVLSASATKCDIRLGKLVHGLVLKHGLDMDQQVETTLVVLYLKCSCLD 300

Query: 301 LAHKVFESTTEKDVVLWTAMISGLVQNDCADKALGVFSQMIESNVELSTATLASALAACA 360
            A KVFEST EKDVVLWTAMISGLVQNDC+D AL VF  M+ESNVEL TATLAS LAACA
Sbjct: 301 FALKVFESTIEKDVVLWTAMISGLVQNDCSDNALEVFYHMVESNVELGTATLASILAACA 360

Query: 361 QLGCCDIGTSIHGYVLRQGIMLDIPAQNSLVTMYAKCNKLEQSCSIFNKMVEKDLVSWNA 420
           QLGC  IGTSIHGY+LRQGIM DIPAQNSLVTMYAKCN+LEQSC+IFNK+VEK+LVSWNA
Sbjct: 361 QLGCYHIGTSIHGYILRQGIMFDIPAQNSLVTMYAKCNRLEQSCAIFNKIVEKNLVSWNA 420

Query: 421 IVAGHAKNGYLSKAIFFFNEMR-TSLQRPDSITVTSLLQACGSAGALCQGKWIHNFVLRS 480
           I+AGHAKNGYLSKAIFFF+EMR TS QRPDSITVTSLLQACGSAGALCQGKWIH+F+ RS
Sbjct: 421 IIAGHAKNGYLSKAIFFFSEMRATSFQRPDSITVTSLLQACGSAGALCQGKWIHDFIFRS 480

Query: 481 SLIPCIMTETALVDMYFKCGNLEIAQKCFDYMLQQDLVTWSILIAGYGFNGKGEIALRKY 540
           SLIPCIMTETALVDMYFKCG++E AQKCFDYMLQ+DLVTWS LIAGYGFNG+GEIALRKY
Sbjct: 481 SLIPCIMTETALVDMYFKCGDVENAQKCFDYMLQKDLVTWSTLIAGYGFNGQGEIALRKY 540

Query: 541 SEFLGTGMEPNHVIFLSVLSACSHSGLISQGLSIYESMTKDFRMPANLEHRACIIDLLSR 600
           SEFLGTGMEPNHVIFLSVLSACSHSGLI+QGLSIYESMTKDF MP NLEHRACIIDLLSR
Sbjct: 541 SEFLGTGMEPNHVIFLSVLSACSHSGLINQGLSIYESMTKDFSMPTNLEHRACIIDLLSR 600

Query: 601 AGKVDEAYSFYKMMFKEPSIDVLGILLDACRVNGSVELGKVIARDMFELKPVDAGNFLQL 660
           AGKV+EAYSFY  MF+EPSIDVLGILLDACRVNG+VELG+VI+RDMFELKPVDAGN++QL
Sbjct: 601 AGKVEEAYSFYNRMFEEPSIDVLGILLDACRVNGNVELGEVISRDMFELKPVDAGNYVQL 660

Query: 661 VHSYASMSRWDGVEEAWTQMRSLGLKKLPGWSSIEVHGTSFTFFSVHNSHPKIEDIILTV 720
            HSYAS SRWDGVE AWTQMRSLGLKKLPGWS IEV GTSFTFFSVHNSHPKIE+I+ TV
Sbjct: 661 AHSYASTSRWDGVEVAWTQMRSLGLKKLPGWSCIEVDGTSFTFFSVHNSHPKIEEIVWTV 720

Query: 721 KSLSNDIRKMHVENEISDD 739
           KSLS DIRKMH+E+EIS D
Sbjct: 721 KSLSKDIRKMHIESEISPD 739

BLAST of Lsi06G000580 vs. ExPASy TrEMBL
Match: A0A5D3CX33 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1610G00070 PE=4 SV=1)

HSP 1 Score: 1278.1 bits (3306), Expect = 0.0e+00
Identity = 627/701 (89.44%), Postives = 665/701 (94.86%), Query Frame = 0

Query: 41  QNTNTPPDAYTFPSLLKACTNLNLFSNGLSIHQSVIVHGLSHDSYIGSSLISFYAKFGCI 100
           Q T+TP DAYTFPSL KACTNLNLFS+GLS+HQSV+V+GLSHDSYIGSSLISFYAKFGCI
Sbjct: 2   QKTHTPSDAYTFPSLFKACTNLNLFSHGLSLHQSVVVNGLSHDSYIGSSLISFYAKFGCI 61

Query: 101 QFGRKVFDTMPERNVVPWTTLIGCYSRQGDIDIAFSRFKQMRESGIQPTSVTFLSLLPGV 160
             GRKVFDTM +RNVVPWTT+IG YSR+GDIDIAFS FKQMRESGIQPTSVT LSLLPG+
Sbjct: 62  HLGRKVFDTMLKRNVVPWTTIIGSYSREGDIDIAFSMFKQMRESGIQPTSVTLLSLLPGI 121

Query: 161 SELPLLLCLHCLIVLYGFESDLALSNSMVNMYGKCGRIADARSLFESMDYRDIVSWNSLL 220
           S+LPLLLCLHCLI LYGFESDLALSNSMVNMYGKCGRIADARSLFES+DYRDIVSWNSLL
Sbjct: 122 SKLPLLLCLHCLIFLYGFESDLALSNSMVNMYGKCGRIADARSLFESIDYRDIVSWNSLL 181

Query: 221 SAYSKIGGIEEILQLVQGMRIEDIKPDKQTFCSALSASAIKGDLRFGKLVHGLILKDGLD 280
           SAYSKIG  EEILQLVQ M+IEDIKPDKQTFCSALSASAIKGDLR GKLVHGL+LKDGL+
Sbjct: 182 SAYSKIGATEEILQLVQAMKIEDIKPDKQTFCSALSASAIKGDLRLGKLVHGLMLKDGLN 241

Query: 281 IDQQVETALVVLYLRCRCLDLAHKVFESTTEKDVVLWTAMISGLVQNDCADKALGVFSQM 340
           IDQ VE+ALVVLYLRCRCLDLAHKVF+STTEKDVV+WTAMISGLVQNDCADKALGVF QM
Sbjct: 242 IDQHVESALVVLYLRCRCLDLAHKVFKSTTEKDVVMWTAMISGLVQNDCADKALGVFYQM 301

Query: 341 IESNVELSTATLASALAACAQLGCCDIGTSIHGYVLRQGIMLDIPAQNSLVTMYAKCNKL 400
           IESNV+ STATLASALAACAQLGCCDIG SIHGYVLRQGIMLDIPAQNSLVTMYAKCNKL
Sbjct: 302 IESNVQPSTATLASALAACAQLGCCDIGASIHGYVLRQGIMLDIPAQNSLVTMYAKCNKL 361

Query: 401 EQSCSIFNKMVEKDLVSWNAIVAGHAKNGYLSKAIFFFNEMRTSLQRPDSITVTSLLQAC 460
           +QSCSIFNKMVEKD+VSWNAIVAG+AKNGYLSKAIFFFNEMRTS QRPDSITVTSLLQAC
Sbjct: 362 QQSCSIFNKMVEKDVVSWNAIVAGNAKNGYLSKAIFFFNEMRTSFQRPDSITVTSLLQAC 421

Query: 461 GSAGALCQGKWIHNFVLRSSLIPCIMTETALVDMYFKCGNLEIAQKCFDYMLQQDLVTWS 520
           GSAGALCQGKWIHNFVLRSSLIPCIMTETALVDMYFKCGNLE AQKCFD M Q+DLV WS
Sbjct: 422 GSAGALCQGKWIHNFVLRSSLIPCIMTETALVDMYFKCGNLENAQKCFDCMSQRDLVAWS 481

Query: 521 ILIAGYGFNGKGEIALRKYSEFLGTGMEPNHVIFLSVLSACSHSGLISQGLSIYESMTKD 580
            LI GYGFNGKGEIALRKYSEFLGTGMEPNHVIF+SVLSACSHSGLISQGLSIYESMTKD
Sbjct: 482 TLIVGYGFNGKGEIALRKYSEFLGTGMEPNHVIFISVLSACSHSGLISQGLSIYESMTKD 541

Query: 581 FRMPANLEHRACIIDLLSRAGKVDEAYSFYKMMFKEPSIDVLGILLDACRVNGSVELGKV 640
           FRMP NLEHRACI+DLLSRAGKVDEAYSFYKMMFKEPS+ VLG LLDACRVNGSVELGKV
Sbjct: 542 FRMPPNLEHRACIVDLLSRAGKVDEAYSFYKMMFKEPSMVVLGTLLDACRVNGSVELGKV 601

Query: 641 IARDMFELKPVDAGNFLQLVHSYASMSRWDGVEEAWTQMRSLGLKKLPGWSSIEVHGTSF 700
           IARDMFELKPVD GNF+QL +SYASM+RWDGVE+AWTQMRSLGLKK PGWSSIE+HGT+F
Sbjct: 602 IARDMFELKPVDPGNFVQLANSYASMNRWDGVEKAWTQMRSLGLKKFPGWSSIELHGTTF 661

Query: 701 TFFSVHNSHPKIEDIILTVKSLSNDIRKMHVENEISDDFVE 742
           TFF+ HNSHPKIE IILTVK+LS DIR ++++NEI +DFVE
Sbjct: 662 TFFAAHNSHPKIEKIILTVKALSKDIRNLYIKNEICEDFVE 702

BLAST of Lsi06G000580 vs. NCBI nr
Match: XP_038878475.1 (pentatricopeptide repeat-containing protein At4g04370 [Benincasa hispida] >XP_038878476.1 pentatricopeptide repeat-containing protein At4g04370 [Benincasa hispida])

HSP 1 Score: 1411.4 bits (3652), Expect = 0.0e+00
Identity = 698/741 (94.20%), Postives = 719/741 (97.03%), Query Frame = 0

Query: 3   RLIHEPIAHGSTKSFNSLINRLSSQGAHHQVLQTYISFQNTNTPPDAYTFPSLLKACTNL 62
           +LIHEPIAHGSTKSFNSL+NRLSSQGAHHQVLQTYISFQNTNTPPDAYTFPSLLKACTNL
Sbjct: 13  KLIHEPIAHGSTKSFNSLLNRLSSQGAHHQVLQTYISFQNTNTPPDAYTFPSLLKACTNL 72

Query: 63  NLFSNGLSIHQSVIVHGLSHDSYIGSSLISFYAKFGCIQFGRKVFDTMPERNVVPWTTLI 122
           N+FSNGLSIHQSVIV+GLSHDSYIGSSLISFYAKFGCI FGRKVFDTMPERNVVPWTTLI
Sbjct: 73  NMFSNGLSIHQSVIVNGLSHDSYIGSSLISFYAKFGCIHFGRKVFDTMPERNVVPWTTLI 132

Query: 123 GCYSRQGDIDIAFSRFKQMRESGIQPTSVTFLSLLPGVSELPLLLCLHCLIVLYGFESDL 182
           GCYSRQGDIDIAFS FKQMRESGIQPTSVTFLSLLPG+SELPLLLCLHCLIVLYGFESDL
Sbjct: 133 GCYSRQGDIDIAFSMFKQMRESGIQPTSVTFLSLLPGISELPLLLCLHCLIVLYGFESDL 192

Query: 183 ALSNSMVNMYGKCGRIADARSLFESMDYRDIVSWNSLLSAYSKIGGIEEILQLVQGMRIE 242
           AL NSMVNMYGKCG+I DARSLFESMDYRD+VSWNSLLSAYSKIGGIEEIL+ +QGMRIE
Sbjct: 193 ALLNSMVNMYGKCGKIGDARSLFESMDYRDLVSWNSLLSAYSKIGGIEEILKFIQGMRIE 252

Query: 243 DIKPDKQTFCSALSASAIKGDLRFGKLVHGLILKDGLDIDQQVETALVVLYLRCRCLDLA 302
           DIKPDKQTFCSALSASAIKGDLRFGKLVH LILKDG DIDQQVETAL+VLYLRCRCLDLA
Sbjct: 253 DIKPDKQTFCSALSASAIKGDLRFGKLVHCLILKDGSDIDQQVETALIVLYLRCRCLDLA 312

Query: 303 HKVFESTTEKDVVLWTAMISGLVQNDCADKALGVFSQMIESNVELSTATLASALAACAQL 362
           H+VF+STTEKD VLWTAMISGLVQNDCADKALGVF QMIESNVE STATLASAL+ACAQL
Sbjct: 313 HEVFKSTTEKDAVLWTAMISGLVQNDCADKALGVFYQMIESNVEPSTATLASALSACAQL 372

Query: 363 GCCDIGTSIHGYVLRQGIMLDIPAQNSLVTMYAKCNKLEQSCSIFNKMVEKDLVSWNAIV 422
            CCDIGTSIHGYVLRQGI+LDIPAQNSLVTMYAKCNKLEQSCSIFN+MVEKDLVSWNAIV
Sbjct: 373 VCCDIGTSIHGYVLRQGILLDIPAQNSLVTMYAKCNKLEQSCSIFNEMVEKDLVSWNAIV 432

Query: 423 AGHAKNGYLSKAIFFFNEMRTSLQRPDSITVTSLLQACGSAGALCQGKWIHNFVLRSSLI 482
           AGHAKNGYLSKAIFFFNEMRTS QRPDSITVTSLLQACGSAGAL QGKWIHNFVLRSSLI
Sbjct: 433 AGHAKNGYLSKAIFFFNEMRTSFQRPDSITVTSLLQACGSAGALFQGKWIHNFVLRSSLI 492

Query: 483 PCIMTETALVDMYFKCGNLEIAQKCFDYMLQQDLVTWSILIAGYGFNGKGEIALRKYSEF 542
           PCIMTETALVDMYFKCGNL  AQKCFDYMLQ+DLVTWSILIAGYGFNGKGEIALRKYSEF
Sbjct: 493 PCIMTETALVDMYFKCGNLGTAQKCFDYMLQKDLVTWSILIAGYGFNGKGEIALRKYSEF 552

Query: 543 LGTGMEPNHVIFLSVLSACSHSGLISQGLSIYESMTKDFRMPANLEHRACIIDLLSRAGK 602
           LGTGMEPNHVIFLSVLSACSHSGLI QGL+IYESMTKDFRM  NLEHRACIIDLLSRAGK
Sbjct: 553 LGTGMEPNHVIFLSVLSACSHSGLIIQGLNIYESMTKDFRMSPNLEHRACIIDLLSRAGK 612

Query: 603 VDEAYSFYKMMFKEPSIDVLGILLDACRVNGSVELGKVIARDMFELKPVDAGNFLQLVHS 662
           VDEAYSFYKMMFKEP+IDVLGILLDACRVNGSV+LGKVIARDMFELKPVDAGNF+QL HS
Sbjct: 613 VDEAYSFYKMMFKEPAIDVLGILLDACRVNGSVQLGKVIARDMFELKPVDAGNFVQLAHS 672

Query: 663 YASMSRWDGVEEAWTQMRSLGLKKLPGWSSIEVHGTSFTFFSVHNSHPKIEDIILTVKSL 722
           YASMSRWDGVE AWTQMRSLGLKKLPGWSSIEVHGTSFTFFSVHNSHPKIEDIILTVKSL
Sbjct: 673 YASMSRWDGVEAAWTQMRSLGLKKLPGWSSIEVHGTSFTFFSVHNSHPKIEDIILTVKSL 732

Query: 723 SNDIRKMHVENEISDDFVEIS 744
           S DIRKMHVENEI +DFVEIS
Sbjct: 733 SKDIRKMHVENEIREDFVEIS 753

BLAST of Lsi06G000580 vs. NCBI nr
Match: XP_016899786.1 (PREDICTED: pentatricopeptide repeat-containing protein At4g04370 [Cucumis melo])

HSP 1 Score: 1346.6 bits (3484), Expect = 0.0e+00
Identity = 662/741 (89.34%), Postives = 703/741 (94.87%), Query Frame = 0

Query: 1   MNRLIHEPIAHGSTKSFNSLINRLSSQGAHHQVLQTYISFQNTNTPPDAYTFPSLLKACT 60
           M+RLIHE IAHGSTKSFNSL++RLSSQGAHHQVLQTYIS Q T+TP DAYTFPSL KACT
Sbjct: 1   MSRLIHESIAHGSTKSFNSLVSRLSSQGAHHQVLQTYISMQKTHTPSDAYTFPSLFKACT 60

Query: 61  NLNLFSNGLSIHQSVIVHGLSHDSYIGSSLISFYAKFGCIQFGRKVFDTMPERNVVPWTT 120
           NLNLFS+GLS+HQSV+V+GLSHDSYIGSSLISFYAKFGCI  GRKVFDTM +RNVVPWTT
Sbjct: 61  NLNLFSHGLSLHQSVVVNGLSHDSYIGSSLISFYAKFGCIHLGRKVFDTMLKRNVVPWTT 120

Query: 121 LIGCYSRQGDIDIAFSRFKQMRESGIQPTSVTFLSLLPGVSELPLLLCLHCLIVLYGFES 180
           +IG YSR+GDIDIAFS FKQMRESGIQPTSVT LSLLPG+S+LPLLLCLHCLI LYGFES
Sbjct: 121 IIGSYSREGDIDIAFSMFKQMRESGIQPTSVTLLSLLPGISKLPLLLCLHCLIFLYGFES 180

Query: 181 DLALSNSMVNMYGKCGRIADARSLFESMDYRDIVSWNSLLSAYSKIGGIEEILQLVQGMR 240
           DLALSNSMVNMYGKCGRIADARSLFES+DYRDIVSWNSLLSAYSKIG  EEILQLVQ M+
Sbjct: 181 DLALSNSMVNMYGKCGRIADARSLFESIDYRDIVSWNSLLSAYSKIGATEEILQLVQAMK 240

Query: 241 IEDIKPDKQTFCSALSASAIKGDLRFGKLVHGLILKDGLDIDQQVETALVVLYLRCRCLD 300
           IEDIKPDKQTFCSALSASAIKGDLR GKLVHGL+LKDGL+IDQ VE+ALVVLYLRCRCLD
Sbjct: 241 IEDIKPDKQTFCSALSASAIKGDLRLGKLVHGLMLKDGLNIDQHVESALVVLYLRCRCLD 300

Query: 301 LAHKVFESTTEKDVVLWTAMISGLVQNDCADKALGVFSQMIESNVELSTATLASALAACA 360
           LAHKVF+STTEKDVV+WTAMISGLVQNDCADKALGVF QMIESNV+ STATLASALAACA
Sbjct: 301 LAHKVFKSTTEKDVVMWTAMISGLVQNDCADKALGVFYQMIESNVQPSTATLASALAACA 360

Query: 361 QLGCCDIGTSIHGYVLRQGIMLDIPAQNSLVTMYAKCNKLEQSCSIFNKMVEKDLVSWNA 420
           QLGCCDIG SIHGYVLRQGIMLDIPAQNSLVTMYAKCNKL+QSCSIFNKMVEKD+VSWNA
Sbjct: 361 QLGCCDIGASIHGYVLRQGIMLDIPAQNSLVTMYAKCNKLQQSCSIFNKMVEKDVVSWNA 420

Query: 421 IVAGHAKNGYLSKAIFFFNEMRTSLQRPDSITVTSLLQACGSAGALCQGKWIHNFVLRSS 480
           IVAG+AKNGYLSKAIFFFNEMRTS QRPDSITVTSLLQACGSAGALCQGKWIHNFVLRSS
Sbjct: 421 IVAGNAKNGYLSKAIFFFNEMRTSFQRPDSITVTSLLQACGSAGALCQGKWIHNFVLRSS 480

Query: 481 LIPCIMTETALVDMYFKCGNLEIAQKCFDYMLQQDLVTWSILIAGYGFNGKGEIALRKYS 540
           LIPCIMTETALVDMYFKCGNLE AQKCFD M Q+DLV WS LI GYGFNGKGEIALRKYS
Sbjct: 481 LIPCIMTETALVDMYFKCGNLENAQKCFDCMSQRDLVAWSTLIVGYGFNGKGEIALRKYS 540

Query: 541 EFLGTGMEPNHVIFLSVLSACSHSGLISQGLSIYESMTKDFRMPANLEHRACIIDLLSRA 600
           EFLGTGMEPNHVIF+SVLSACSHSGLISQGLSIYESMTKDFRMP NLEHRACI+DLLSRA
Sbjct: 541 EFLGTGMEPNHVIFISVLSACSHSGLISQGLSIYESMTKDFRMPPNLEHRACIVDLLSRA 600

Query: 601 GKVDEAYSFYKMMFKEPSIDVLGILLDACRVNGSVELGKVIARDMFELKPVDAGNFLQLV 660
           GKVDEAYSFYKMMFKEPS+ VLG LLDACRVNGSVELGKVIARDMFELKPVD GNF+QL 
Sbjct: 601 GKVDEAYSFYKMMFKEPSMVVLGTLLDACRVNGSVELGKVIARDMFELKPVDPGNFVQLA 660

Query: 661 HSYASMSRWDGVEEAWTQMRSLGLKKLPGWSSIEVHGTSFTFFSVHNSHPKIEDIILTVK 720
           +SYASM+RWDGVE+AWTQMRSLGLKK PGWSSIE+HGT+FTFF+ HNSHPKIE IILTVK
Sbjct: 661 NSYASMNRWDGVEKAWTQMRSLGLKKFPGWSSIELHGTTFTFFAAHNSHPKIEKIILTVK 720

Query: 721 SLSNDIRKMHVENEISDDFVE 742
           +LS DIR ++++NEI +DFVE
Sbjct: 721 ALSKDIRNLYIKNEICEDFVE 741

BLAST of Lsi06G000580 vs. NCBI nr
Match: XP_004139152.1 (pentatricopeptide repeat-containing protein At4g04370 [Cucumis sativus])

HSP 1 Score: 1313.1 bits (3397), Expect = 0.0e+00
Identity = 648/743 (87.21%), Postives = 692/743 (93.14%), Query Frame = 0

Query: 1   MNRLIHEPIAHGSTKSFNSLINRLSSQGAHHQVLQTYISFQNTNTPPDAYTFPSLLKACT 60
           M+  IHE IAHG TKSFNSL++RLS QGAHHQVLQTYIS Q T+T  DAYTFPSL KACT
Sbjct: 1   MSGFIHESIAHGCTKSFNSLVSRLSYQGAHHQVLQTYISMQKTHTQLDAYTFPSLFKACT 60

Query: 61  NLNLFSNGLSIHQSVIVHGLSHDSYIGSSLISFYAKFGCIQFGRKVFDTMPERNVVPWTT 120
           NLNLFS+GLS+HQSV+V+GLSHDSYIGSSLISFYAKFGCI  GRKVFDTM +RNVVPWTT
Sbjct: 61  NLNLFSHGLSLHQSVVVNGLSHDSYIGSSLISFYAKFGCIHLGRKVFDTMLKRNVVPWTT 120

Query: 121 LIGCYSRQGDIDIAFSRFKQMRESGIQPTSVTFLSLLPGVSELPLLLCLHCLIVLYGFES 180
           +IG YSR+GDIDIAFS FKQMRESGIQPTSVT LSLLPG+S+LPLLLCLHCLI+L+GFES
Sbjct: 121 IIGSYSREGDIDIAFSMFKQMRESGIQPTSVTLLSLLPGISKLPLLLCLHCLIILHGFES 180

Query: 181 DLALSNSMVNMYGKCGRIADARSLFESMDYRDIVSWNSLLSAYSKIGGIEEILQLVQGMR 240
           DLALSNSMVNMYGKCGRIADAR LF+S+D RDIVSWNSLLSAYSKIG  EEILQL+Q M+
Sbjct: 181 DLALSNSMVNMYGKCGRIADARRLFQSIDCRDIVSWNSLLSAYSKIGATEEILQLLQAMK 240

Query: 241 IEDIKPDKQTFCSALSASAIKGDLRFGKLVHGLILKDGLDIDQQVETALVVLYLRCRCLD 300
           IEDIKPDKQTFCSALSASAIKGDLR GKLVHGL+LKDGL+IDQ VE+ALVVLYLRCRCLD
Sbjct: 241 IEDIKPDKQTFCSALSASAIKGDLRLGKLVHGLMLKDGLNIDQHVESALVVLYLRCRCLD 300

Query: 301 LAHKVFESTTEKDVVLWTAMISGLVQNDCADKALGVFSQMIESNVELSTATLASALAACA 360
            A+KVF+STTEKDVV+WTAMISGLVQNDCADKALGVF QMIESNV+ STATLAS LAACA
Sbjct: 301 PAYKVFKSTTEKDVVMWTAMISGLVQNDCADKALGVFYQMIESNVKPSTATLASGLAACA 360

Query: 361 QLGCCDIGTSIHGYVLRQGIMLDIPAQNSLVTMYAKCNKLEQSCSIFNKMVEKDLVSWNA 420
           QLGCCDIG SIHGYVLRQGIMLDIPAQNSLVTMYAKCNKL+QSCSIFNKMVEKDLVSWNA
Sbjct: 361 QLGCCDIGASIHGYVLRQGIMLDIPAQNSLVTMYAKCNKLQQSCSIFNKMVEKDLVSWNA 420

Query: 421 IVAGHAKNGYLSKAIFFFNEMRTSLQRPDSITVTSLLQACGSAGALCQGKWIHNFVLRSS 480
           IVAGHAKNGYLSK IFFFNEMR S  RPDSITVTSLLQACGSAGALCQGKWIHNFVLRSS
Sbjct: 421 IVAGHAKNGYLSKGIFFFNEMRKSFLRPDSITVTSLLQACGSAGALCQGKWIHNFVLRSS 480

Query: 481 LIPCIMTETALVDMYFKCGNLEIAQKCFDYMLQQDLVTWSILIAGYGFNGKGEIALRKYS 540
           LIPCIMTETALVDMYFKCGNLE AQKCFD MLQ+DLV WS LI GYGFNGKGEIALRKYS
Sbjct: 481 LIPCIMTETALVDMYFKCGNLENAQKCFDCMLQRDLVAWSTLIVGYGFNGKGEIALRKYS 540

Query: 541 EFLGTGMEPNHVIFLSVLSACSHSGLISQGLSIYESMTKDFRMPANLEHRACIIDLLSRA 600
           EFLGTGMEPNHVIF+SVLSACSH GLIS+GLSIYESMTKDFRM  NLEHRAC++DLLSRA
Sbjct: 541 EFLGTGMEPNHVIFISVLSACSHGGLISKGLSIYESMTKDFRMSPNLEHRACVVDLLSRA 600

Query: 601 GKVDEAYSFYKMMFKEPSIDVLGILLDACRVNGSVELGKVIARDMFELKPVDAGNFLQLV 660
           GKVDEAYSFYKMMFKEPSI VLG+LLDACRVNG VELGKVIARDMFELKPVD GNF+QL 
Sbjct: 601 GKVDEAYSFYKMMFKEPSIVVLGMLLDACRVNGRVELGKVIARDMFELKPVDPGNFVQLA 660

Query: 661 HSYASMSRWDGVEEAWTQMRSLGLKKLPGWSSIEVHGTSFTFFSVHNSHPKIEDIILTVK 720
           +SYASMSRWDGVE+AWTQMRSLGLKK PGWSSIEVHGT+FTFF+ HNSHPKIE IILTVK
Sbjct: 661 NSYASMSRWDGVEKAWTQMRSLGLKKYPGWSSIEVHGTTFTFFASHNSHPKIEKIILTVK 720

Query: 721 SLSNDIRKMHVENEISDDFVEIS 744
           +LS +IR ++V+NEI +DFVE S
Sbjct: 721 ALSKNIRNLYVKNEICEDFVEYS 743

BLAST of Lsi06G000580 vs. NCBI nr
Match: XP_022159804.1 (pentatricopeptide repeat-containing protein At4g04370 [Momordica charantia] >XP_022159805.1 pentatricopeptide repeat-containing protein At4g04370 [Momordica charantia] >XP_022159806.1 pentatricopeptide repeat-containing protein At4g04370 [Momordica charantia] >XP_022159807.1 pentatricopeptide repeat-containing protein At4g04370 [Momordica charantia])

HSP 1 Score: 1299.6 bits (3362), Expect = 0.0e+00
Identity = 639/746 (85.66%), Postives = 689/746 (92.36%), Query Frame = 0

Query: 1   MNRLIH-------EPIAHGSTKSFNSLINRLSSQGAHHQVLQTYISFQNTNTPPDAYTFP 60
           MNRLIH        PIA+GSTKSFNS+INRLSSQGAHHQVLQTY S Q T+TPPDAYTFP
Sbjct: 1   MNRLIHGLKPPCPPPIANGSTKSFNSIINRLSSQGAHHQVLQTYASMQKTSTPPDAYTFP 60

Query: 61  SLLKACTNLNLFSNGLSIHQSVIVHGLSHDSYIGSSLISFYAKFGCIQFGRKVFDTMPER 120
           SLLKACT LNLF +GLS+HQS+IV+G S DSYIGSSLISFYAKFGCI  GRKVFD MPER
Sbjct: 61  SLLKACTILNLFLDGLSLHQSIIVNGFSLDSYIGSSLISFYAKFGCIDIGRKVFDIMPER 120

Query: 121 NVVPWTTLIGCYSRQGDIDIAFSRFKQMRESGIQPTSVTFLSLLPGVSELPLLLCLHCLI 180
           NVVPWTT+IGCYSR+G+ID+AFS FKQMR +GIQPTSVT LSLLP +SELPLL CLHC I
Sbjct: 121 NVVPWTTIIGCYSREGEIDVAFSMFKQMRATGIQPTSVTLLSLLPSISELPLLQCLHCWI 180

Query: 181 VLYGFESDLALSNSMVNMYGKCGRIADARSLFESMDYRDIVSWNSLLSAYSKIGGIEEIL 240
           +LYGFES+L+LSNSMVN+YG+CG I DARSLFESMDYRDIVSWNSLLSAYSKIG IEEIL
Sbjct: 181 ILYGFESNLSLSNSMVNVYGRCGSIEDARSLFESMDYRDIVSWNSLLSAYSKIGVIEEIL 240

Query: 241 QLVQGMRIEDIKPDKQTFCSALSASAIKGDLRFGKLVHGLILKDGLDIDQQVETALVVLY 300
           QLV GMR EDIKPDKQTFCSALSASAIKGD+R GKLVHGLI+KDGL IDQQVETAL+VLY
Sbjct: 241 QLVLGMRTEDIKPDKQTFCSALSASAIKGDIRLGKLVHGLIIKDGLGIDQQVETALMVLY 300

Query: 301 LRCRCLDLAHKVFESTTEKDVVLWTAMISGLVQNDCADKALGVFSQMIESNVELSTATLA 360
           LRC+ LDLA KVF+STTEKD+VLWTAMISGLVQNDCADKAL VF QM+ESN+E  TATLA
Sbjct: 301 LRCKSLDLALKVFKSTTEKDMVLWTAMISGLVQNDCADKALRVFYQMLESNMEPGTATLA 360

Query: 361 SALAACAQLGCCDIGTSIHGYVLRQGIMLDIPAQNSLVTMYAKCNKLEQSCSIFNKMVEK 420
           SALAACAQLGC DIGT IHGY+LRQGIMLDIPAQN+LVTMYAKCN+LEQSC IFNKMVE+
Sbjct: 361 SALAACAQLGCYDIGTLIHGYILRQGIMLDIPAQNALVTMYAKCNRLEQSCGIFNKMVER 420

Query: 421 DLVSWNAIVAGHAKNGYLSKAIFFFNEMRTSLQRPDSITVTSLLQACGSAGALCQGKWIH 480
           DLVSWNAIVAGHAKNGYLSKAI FFNEMRTSLQRPDSITVTSLLQACGSAGAL QGKWIH
Sbjct: 421 DLVSWNAIVAGHAKNGYLSKAILFFNEMRTSLQRPDSITVTSLLQACGSAGALWQGKWIH 480

Query: 481 NFVLRSSLIPCIMTETALVDMYFKCGNLEIAQKCFDYMLQQDLVTWSILIAGYGFNGKGE 540
           NFV RSSL+PCIM ETAL+DMYFKCGNLEIAQKCFDYM  QDLVTWS LI+GYGFNG GE
Sbjct: 481 NFVFRSSLMPCIMIETALIDMYFKCGNLEIAQKCFDYMPHQDLVTWSTLISGYGFNGNGE 540

Query: 541 IALRKYSEFLGTGMEPNHVIFLSVLSACSHSGLISQGLSIYESMTKDFRMPANLEHRACI 600
           IALRKYSEFLGTG+EPNHVIFLSVLSACSHSGL++QGL IYESMT+DF MP NLEHRACI
Sbjct: 541 IALRKYSEFLGTGLEPNHVIFLSVLSACSHSGLVNQGLRIYESMTRDFLMPPNLEHRACI 600

Query: 601 IDLLSRAGKVDEAYSFYKMMFKEPSIDVLGILLDACRVNGSVELGKVIARDMFELKPVDA 660
           +DLLSRAGKV+EAYSFYKMMF+EPSIDVLGILLDACRVNGSVELG+ IARD+F LKPVD 
Sbjct: 601 VDLLSRAGKVEEAYSFYKMMFQEPSIDVLGILLDACRVNGSVELGEAIARDIFALKPVDP 660

Query: 661 GNFLQLVHSYASMSRWDGVEEAWTQMRSLGLKKLPGWSSIEVHGTSFTFFSVHNSHPKIE 720
           GN++QL HSYASM RWDGVEEAWTQMRSLGLKKLPGWSSIEVHGTSF+F+SVHNSHPKIE
Sbjct: 661 GNYVQLAHSYASMGRWDGVEEAWTQMRSLGLKKLPGWSSIEVHGTSFSFYSVHNSHPKIE 720

Query: 721 DIILTVKSLSNDIRKMHVENEISDDF 740
           +I+LTVKSLSNDIRKMH+ENEI+ DF
Sbjct: 721 EIMLTVKSLSNDIRKMHIENEINKDF 746

BLAST of Lsi06G000580 vs. NCBI nr
Match: XP_022931568.1 (pentatricopeptide repeat-containing protein At4g04370 [Cucurbita moschata] >XP_022931569.1 pentatricopeptide repeat-containing protein At4g04370 [Cucurbita moschata])

HSP 1 Score: 1280.8 bits (3313), Expect = 0.0e+00
Identity = 635/739 (85.93%), Postives = 677/739 (91.61%), Query Frame = 0

Query: 1   MNRLIHEPIAHGSTKSFNSLINRLSSQGAHHQVLQTYISFQNTNTPPDAYTFPSLLKACT 60
           MNRLIHE I HGSTKSFN+LINRLSSQ AHHQVLQTYIS  NTNTPPDAYTFPSLLKACT
Sbjct: 1   MNRLIHESITHGSTKSFNALINRLSSQAAHHQVLQTYISMLNTNTPPDAYTFPSLLKACT 60

Query: 61  NLNLFSNGLSIHQSVIVHGLSHDSYIGSSLISFYAKFGCIQFGRKVFDTMPERNVVPWTT 120
            LN FSNGLSIHQSVIV+GLSHDSYIGSSLISFYAKFGCI  GRKVFDTMPERNVVPWT 
Sbjct: 61  LLNSFSNGLSIHQSVIVNGLSHDSYIGSSLISFYAKFGCIHLGRKVFDTMPERNVVPWTA 120

Query: 121 LIGCYSRQGDIDIAFSRFKQMRESGIQPTSVTFLSLLPGVSELPLLLCLHCLIVLYGFES 180
           +IGCYSRQGD+ IAF+ FKQMRE+ I PTSVTFLSLLPG+SELPLL  LHCLIVLYGF S
Sbjct: 121 IIGCYSRQGDVGIAFTMFKQMRENEIHPTSVTFLSLLPGISELPLLQGLHCLIVLYGFGS 180

Query: 181 DLALSNSMVNMYGKCGRIADARSLFESMDYRDIVSWNSLLSAYSKIGGIEEILQLVQGMR 240
           DLALSNSMV+MYG+CG +  A SLFESMD RDIVSWNSLLSAYSKI GIEEILQLV  MR
Sbjct: 181 DLALSNSMVSMYGRCGSVDYATSLFESMDSRDIVSWNSLLSAYSKIVGIEEILQLVHSMR 240

Query: 241 IEDIKPDKQTFCSALSASAIKGDLRFGKLVHGLILKDGLDIDQQVETALVVLYLRCRCLD 300
           IE IKPDK+TFCS LSASA K D+R GKLVHGL+LK GLD+DQQVET LVVLYL+C CLD
Sbjct: 241 IEGIKPDKRTFCSVLSASATKCDIRLGKLVHGLVLKHGLDMDQQVETTLVVLYLKCSCLD 300

Query: 301 LAHKVFESTTEKDVVLWTAMISGLVQNDCADKALGVFSQMIESNVELSTATLASALAACA 360
            A KVFEST EKDVVLWTAMISGLVQNDC+D AL VF  M+ESNVEL TATLAS LAACA
Sbjct: 301 FALKVFESTIEKDVVLWTAMISGLVQNDCSDNALEVFYHMVESNVELGTATLASILAACA 360

Query: 361 QLGCCDIGTSIHGYVLRQGIMLDIPAQNSLVTMYAKCNKLEQSCSIFNKMVEKDLVSWNA 420
           QLGC  IGTSIHGY+LRQGIM DIPAQNSLVTMYAKCN+LEQSC+IFNK+VEK+LVSWNA
Sbjct: 361 QLGCYHIGTSIHGYILRQGIMFDIPAQNSLVTMYAKCNRLEQSCAIFNKIVEKNLVSWNA 420

Query: 421 IVAGHAKNGYLSKAIFFFNEMR-TSLQRPDSITVTSLLQACGSAGALCQGKWIHNFVLRS 480
           I+AGHAKNGYLSKAIFFF+EMR TS QRPDSITVTSLLQACGSAGALCQGKWIH+F+ RS
Sbjct: 421 IIAGHAKNGYLSKAIFFFSEMRATSFQRPDSITVTSLLQACGSAGALCQGKWIHDFIFRS 480

Query: 481 SLIPCIMTETALVDMYFKCGNLEIAQKCFDYMLQQDLVTWSILIAGYGFNGKGEIALRKY 540
           SLIPCIMTETALVDMYFKCG++E AQKCFDYMLQ+DLVTWS LIAGYGFNG+GEIALRKY
Sbjct: 481 SLIPCIMTETALVDMYFKCGDVENAQKCFDYMLQKDLVTWSTLIAGYGFNGQGEIALRKY 540

Query: 541 SEFLGTGMEPNHVIFLSVLSACSHSGLISQGLSIYESMTKDFRMPANLEHRACIIDLLSR 600
           SEFLGTGMEPNHVIFLSVLSACSHSGLI+QGLSIYESMTKDF MP NLEHRACIIDLLSR
Sbjct: 541 SEFLGTGMEPNHVIFLSVLSACSHSGLINQGLSIYESMTKDFSMPTNLEHRACIIDLLSR 600

Query: 601 AGKVDEAYSFYKMMFKEPSIDVLGILLDACRVNGSVELGKVIARDMFELKPVDAGNFLQL 660
           AGKV+EAYSFY  MF+EPSIDVLGILLDACRVNG+VELG+VI+RDMFELKPVDAGN++QL
Sbjct: 601 AGKVEEAYSFYNRMFEEPSIDVLGILLDACRVNGNVELGEVISRDMFELKPVDAGNYVQL 660

Query: 661 VHSYASMSRWDGVEEAWTQMRSLGLKKLPGWSSIEVHGTSFTFFSVHNSHPKIEDIILTV 720
            HSYAS SRWDGVE AWTQMRSLGLKKLPGWS IEV GTSFTFFSVHNSHPKIE+I+ TV
Sbjct: 661 AHSYASTSRWDGVEVAWTQMRSLGLKKLPGWSCIEVDGTSFTFFSVHNSHPKIEEIVWTV 720

Query: 721 KSLSNDIRKMHVENEISDD 739
           KSLS DIRKMH+E+EIS D
Sbjct: 721 KSLSKDIRKMHIESEISPD 739

BLAST of Lsi06G000580 vs. TAIR 10
Match: AT4G04370.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 797.3 bits (2058), Expect = 1.0e-230
Identity = 391/722 (54.16%), Postives = 520/722 (72.02%), Query Frame = 0

Query: 13  STKSFNSLINRLSSQGAHHQVLQTYISFQNTNTPPDAYTFPSLLKACTNLNLFSNGLSIH 72
           STK FNS IN LSS G H QVL T+ S       PD +TFPSLLKAC +L   S GLSIH
Sbjct: 10  STKYFNSHINHLSSHGDHKQVLSTFSSMLANKLLPDTFTFPSLLKACASLQRLSFGLSIH 69

Query: 73  QSVIVHGLSHDSYIGSSLISFYAKFGCIQFGRKVFDTMPERNVVPWTTLIGCYSRQGDID 132
           Q V+V+G S D YI SSL++ YAKFG +   RKVF+ M ER+VV WT +IGCYSR G + 
Sbjct: 70  QQVLVNGFSSDFYISSSLVNLYAKFGLLAHARKVFEEMRERDVVHWTAMIGCYSRAGIVG 129

Query: 133 IAFSRFKQMRESGIQPTSVTFLSLLPGVSELPLLLCLHCLIVLYGFESDLALSNSMVNMY 192
            A S   +MR  GI+P  VT L +L GV E+  L CLH   V+YGF+ D+A+ NSM+N+Y
Sbjct: 130 EACSLVNEMRFQGIKPGPVTLLEMLSGVLEITQLQCLHDFAVIYGFDCDIAVMNSMLNLY 189

Query: 193 GKCGRIADARSLFESMDYRDIVSWNSLLSAYSKIGGIEEILQLVQGMRIEDIKPDKQTFC 252
            KC  + DA+ LF+ M+ RD+VSWN+++S Y+ +G + EIL+L+  MR + ++PD+QTF 
Sbjct: 190 CKCDHVGDAKDLFDQMEQRDMVSWNTMISGYASVGNMSEILKLLYRMRGDGLRPDQQTFG 249

Query: 253 SALSASAIKGDLRFGKLVHGLILKDGLDIDQQVETALVVLYLRCRCLDLAHKVFESTTEK 312
           ++LS S    DL  G+++H  I+K G D+D  ++TAL+ +YL+C   + +++V E+   K
Sbjct: 250 ASLSVSGTMCDLEMGRMLHCQIVKTGFDVDMHLKTALITMYLKCGKEEASYRVLETIPNK 309

Query: 313 DVVLWTAMISGLVQNDCADKALGVFSQMIESNVELSTATLASALAACAQLGCCDIGTSIH 372
           DVV WT MISGL++   A+KAL VFS+M++S  +LS+  +AS +A+CAQLG  D+G S+H
Sbjct: 310 DVVCWTVMISGLMRLGRAEKALIVFSEMLQSGSDLSSEAIASVVASCAQLGSFDLGASVH 369

Query: 373 GYVLRQGIMLDIPAQNSLVTMYAKCNKLEQSCSIFNKMVEKDLVSWNAIVAGHAKNGYLS 432
           GYVLR G  LD PA NSL+TMYAKC  L++S  IF +M E+DLVSWNAI++G+A+N  L 
Sbjct: 370 GYVLRHGYTLDTPALNSLITMYAKCGHLDKSLVIFERMNERDLVSWNAIISGYAQNVDLC 429

Query: 433 KAIFFFNEMR-TSLQRPDSITVTSLLQACGSAGALCQGKWIHNFVLRSSLIPCIMTETAL 492
           KA+  F EM+  ++Q+ DS TV SLLQAC SAGAL  GK IH  V+RS + PC + +TAL
Sbjct: 430 KALLLFEEMKFKTVQQVDSFTVVSLLQACSSAGALPVGKLIHCIVIRSFIRPCSLVDTAL 489

Query: 493 VDMYFKCGNLEIAQKCFDYMLQQDLVTWSILIAGYGFNGKGEIALRKYSEFLGTGMEPNH 552
           VDMY KCG LE AQ+CFD +  +D+V+W ILIAGYGF+GKG+IAL  YSEFL +GMEPNH
Sbjct: 490 VDMYSKCGYLEAAQRCFDSISWKDVVSWGILIAGYGFHGKGDIALEIYSEFLHSGMEPNH 549

Query: 553 VIFLSVLSACSHSGLISQGLSIYESMTKDFRMPANLEHRACIIDLLSRAGKVDEAYSFYK 612
           VIFL+VLS+CSH+G++ QGL I+ SM +DF +  N EH AC++DLL RA ++++A+ FYK
Sbjct: 550 VIFLAVLSSCSHNGMVQQGLKIFSSMVRDFGVEPNHEHLACVVDLLCRAKRIEDAFKFYK 609

Query: 613 MMFKEPSIDVLGILLDACRVNGSVELGKVIARDMFELKPVDAGNFLQLVHSYASMSRWDG 672
             F  PSIDVLGI+LDACR NG  E+  +I  DM ELKP DAG++++L HS+A+M RWD 
Sbjct: 610 ENFTRPSIDVLGIILDACRANGKTEVEDIICEDMIELKPGDAGHYVKLGHSFAAMKRWDD 669

Query: 673 VEEAWTQMRSLGLKKLPGWSSIEVHGTSFTFFSVHNSHPKIEDIILTVKSLSNDIRKMHV 732
           V E+W QMRSLGLKKLPGWS IE++G + TFF  H SH   +D +  +K LS ++ +   
Sbjct: 670 VSESWNQMRSLGLKKLPGWSKIEMNGKTTTFFMNHTSHS--DDTVSLLKLLSREMMQFGS 729

Query: 733 EN 734
            N
Sbjct: 730 NN 729

BLAST of Lsi06G000580 vs. TAIR 10
Match: AT1G11290.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 437.6 bits (1124), Expect = 2.0e-122
Identity = 234/710 (32.96%), Postives = 397/710 (55.92%), Query Frame = 0

Query: 46  PPDAYTFPS--LLKACTNLNLFSNGLSIHQSVIVHGLSHDSYIGSSLISFYAKFGCIQFG 105
           P + Y  P+  LL+ C++L      L +   V  +GL  + +  + L+S + ++G +   
Sbjct: 32  PANVYEHPAALLLERCSSLKELRQILPL---VFKNGLYQEHFFQTKLVSLFCRYGSVDEA 91

Query: 106 RKVFDTMPERNVVPWTTLIGCYSRQGDIDIAFSRFKQMRESGIQPTSVTFLSLLP---GV 165
            +VF+ +  +  V + T++  +++  D+D A   F +MR   ++P    F  LL      
Sbjct: 92  ARVFEPIDSKLNVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDE 151

Query: 166 SELPLLLCLHCLIVLYGFESDLALSNSMVNMYGKCGRIADARSLFESMDYRDIVSWNSLL 225
           +EL +   +H L+V  GF  DL     + NMY KC ++ +AR +F+ M  RD+VSWN+++
Sbjct: 152 AELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIV 211

Query: 226 SAYSKIGGIEEILQLVQGMRIEDIKPDKQTFCSALSASAIKGDLRFGKLVHGLILKDGLD 285
           + YS+ G     L++V+ M  E++KP   T  S L A +    +  GK +HG  ++ G D
Sbjct: 212 AGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFD 271

Query: 286 IDQQVETALVVLYLRCRCLDLAHKVFESTTEKDVVLWTAMISGLVQNDCADKALGVFSQM 345
               + TALV +Y +C  L+ A ++F+   E++VV W +MI   VQN+   +A+ +F +M
Sbjct: 272 SLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKM 331

Query: 346 IESNVELSTATLASALAACAQLGCCDIGTSIHGYVLRQGIMLDIPAQNSLVTMYAKCNKL 405
           ++  V+ +  ++  AL ACA LG  + G  IH   +  G+  ++   NSL++MY KC ++
Sbjct: 332 LDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEV 391

Query: 406 EQSCSIFNKMVEKDLVSWNAIVAGHAKNGYLSKAIFFFNEMRTSLQRPDSITVTSLLQAC 465
           + + S+F K+  + LVSWNA++ G A+NG    A+ +F++MR+   +PD+ T  S++ A 
Sbjct: 392 DTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAI 451

Query: 466 GSAGALCQGKWIHNFVLRSSLIPCIMTETALVDMYFKCGNLEIAQKCFDYMLQQDLVTWS 525
                    KWIH  V+RS L   +   TALVDMY KCG + IA+  FD M ++ + TW+
Sbjct: 452 AELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWN 511

Query: 526 ILIAGYGFNGKGEIALRKYSEFLGTGMEPNHVIFLSVLSACSHSGLISQGLSIYESMTKD 585
            +I GYG +G G+ AL  + E     ++PN V FLSV+SACSHSGL+  GL  +  M ++
Sbjct: 512 AMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKEN 571

Query: 586 FRMPANLEHRACIIDLLSRAGKVDEAYSFYKMMFKEPSIDVLGILLDACRVNGSVELGKV 645
           + +  +++H   ++DLL RAG+++EA+ F   M  +P+++V G +L AC+++ +V   + 
Sbjct: 572 YSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFAEK 631

Query: 646 IARDMFELKPVDAGNFLQLVHSYASMSRWDGVEEAWTQMRSLGLKKLPGWSSIEVHGTSF 705
            A  +FEL P D G  + L + Y + S W+ V +    M   GL+K PG S +E+     
Sbjct: 632 AAERLFELNPDDGGYHVLLANIYRAASMWEKVGQVRVSMLRQGLRKTPGCSMVEIKNEVH 691

Query: 706 TFFSVHNSHPKIEDIILTVKSLSNDIRK----------MHVENEISDDFV 741
           +FFS   +HP  + I   ++ L   I++          + VEN++ +  +
Sbjct: 692 SFFSGSTAHPDSKKIYAFLEKLICHIKEAGYVPDTNLVLGVENDVKEQLL 738

BLAST of Lsi06G000580 vs. TAIR 10
Match: AT1G69350.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 422.9 bits (1086), Expect = 5.2e-118
Identity = 233/703 (33.14%), Postives = 393/703 (55.90%), Query Frame = 0

Query: 34  LQTYISFQNTNTPPDAYTFPSLLKACT-NLNLFSNGLSIHQSVIVHGLSHDSYIGSSLIS 93
           +  Y    +  T    + FPS+L+AC  +    S G  +H  +I  G+  D+ I +SL+ 
Sbjct: 85  IDLYHRLVSETTQISKFVFPSVLRACAGSREHLSVGGKVHGRIIKGGVDDDAVIETSLLC 144

Query: 94  FYAKFGCIQFGRKVFDTMPERNVVPWTTLIGCYSRQGDIDIAFSRFKQMRESGIQPTSVT 153
            Y + G +    KVFD MP R++V W+TL+      G++  A   FK M + G++P +VT
Sbjct: 145 MYGQTGNLSDAEKVFDGMPVRDLVAWSTLVSSCLENGEVVKALRMFKCMVDDGVEPDAVT 204

Query: 154 FLSLLPGVSELPLL---LCLHCLIVLYGFESDLALSNSMVNMYGKCGRIADARSLFESMD 213
            +S++ G +EL  L     +H  I    F+ D  L NS++ MY KCG +  +  +FE + 
Sbjct: 205 MISVVEGCAELGCLRIARSVHGQITRKMFDLDETLCNSLLTMYSKCGDLLSSERIFEKIA 264

Query: 214 YRDIVSWNSLLSAYSKIGGIEEILQLVQGMRIEDIKPDKQTFCSALSASAIKGDLRFGKL 273
            ++ VSW +++S+Y++    E+ L+    M    I+P+  T  S LS+  + G +R GK 
Sbjct: 265 KKNAVSWTAMISSYNRGEFSEKALRSFSEMIKSGIEPNLVTLYSVLSSCGLIGLIREGKS 324

Query: 274 VHGLILKDGLDID-QQVETALVVLYLRCRCLDLAHKVFESTTEKDVVLWTAMISGLVQND 333
           VHG  ++  LD + + +  ALV LY  C  L     V    +++++V W ++IS      
Sbjct: 325 VHGFAVRRELDPNYESLSLALVELYAECGKLSDCETVLRVVSDRNIVAWNSLISLYAHRG 384

Query: 334 CADKALGVFSQMIESNVELSTATLASALAACAQLGCCDIGTSIHGYVLRQGIMLDIPAQN 393
              +ALG+F QM+   ++    TLAS+++AC   G   +G  IHG+V+R  +  D   QN
Sbjct: 385 MVIQALGLFRQMVTQRIKPDAFTLASSISACENAGLVPLGKQIHGHVIRTDVS-DEFVQN 444

Query: 394 SLVTMYAKCNKLEQSCSIFNKMVEKDLVSWNAIVAGHAKNGYLSKAIFFFNEMRTSLQRP 453
           SL+ MY+K   ++ + ++FN++  + +V+WN+++ G ++NG   +AI  F+ M  S    
Sbjct: 445 SLIDMYSKSGSVDSASTVFNQIKHRSVVTWNSMLCGFSQNGNSVEAISLFDYMYHSYLEM 504

Query: 454 DSITVTSLLQACGSAGALCQGKWIHNFVLRSSLIPCIMTETALVDMYFKCGNLEIAQKCF 513
           + +T  +++QAC S G+L +GKW+H+ ++ S L   + T+TAL+DMY KCG+L  A+  F
Sbjct: 505 NEVTFLAVIQACSSIGSLEKGKWVHHKLIISGL-KDLFTDTALIDMYAKCGDLNAAETVF 564

Query: 514 DYMLQQDLVTWSILIAGYGFNGKGEIALRKYSEFLGTGMEPNHVIFLSVLSACSHSGLIS 573
             M  + +V+WS +I  YG +G+   A+  +++ + +G +PN V+F++VLSAC HSG + 
Sbjct: 565 RAMSSRSIVSWSSMINAYGMHGRIGSAISTFNQMVESGTKPNEVVFMNVLSACGHSGSVE 624

Query: 574 QGLSIYESMTKDFRMPANLEHRACIIDLLSRAGKVDEAYSFYKMMFKEPSIDVLGILLDA 633
           +G   Y ++ K F +  N EH AC IDLLSR+G + EAY   K M       V G L++ 
Sbjct: 625 EG-KYYFNLMKSFGVSPNSEHFACFIDLLSRSGDLKEAYRTIKEMPFLADASVWGSLVNG 684

Query: 634 CRVNGSVELGKVIARDMFELKPVDAGNFLQLVHSYASMSRWDGVEEAWTQMRSLGLKKLP 693
           CR++  +++ K I  D+ ++   D G +  L + YA    W+      + M+S  LKK+P
Sbjct: 685 CRIHQKMDIIKAIKNDLSDIVTDDTGYYTLLSNIYAEEGEWEEFRRLRSAMKSSNLKKVP 744

Query: 694 GWSSIEVHGTSFTFFSVHNSHPKIEDIILTVKSLSNDIRKMHV 732
           G+S+IE+    F F +   +  + ++I   + +L N   + HV
Sbjct: 745 GYSAIEIDQKVFRFGAGEENRIQTDEIYRFLGNLQNLTNEEHV 784

BLAST of Lsi06G000580 vs. TAIR 10
Match: AT4G21300.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 419.5 bits (1077), Expect = 5.7e-117
Identity = 227/723 (31.40%), Postives = 398/723 (55.05%), Query Frame = 0

Query: 9   IAHGSTKSFNSLINRLSSQGAHHQVLQTYISFQNTNTPPDAYTFPSLLKACTNLNLFSNG 68
           +   S + +NS+I+     G  +Q L  Y         PD  TFP L+KAC  L  F   
Sbjct: 98  LRRSSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFKGI 157

Query: 69  LSIHQSVIVHGLSHDSYIGSSLISFYAKFGCIQFGRKVFDTMPERNVVPWTTLIGCYSRQ 128
             +  +V   G+  + ++ SSLI  Y ++G I    K+FD + +++ V W  ++  Y++ 
Sbjct: 158 DFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKC 217

Query: 129 GDIDIAFSRFKQMRESGIQPTSVTF---LSLLPGVSELPLLLCLHCLIVLYGFESDLALS 188
           G +D     F  MR   I P +VTF   LS+      + L + LH L+V+ G + + ++ 
Sbjct: 218 GALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIK 277

Query: 189 NSMVNMYGKCGRIADARSLFESMDYRDIVSWNSLLSAYSKIGGIEEILQLVQGMRIEDIK 248
           NS+++MY KCGR  DA  LF  M   D V+WN ++S Y + G +EE L     M    + 
Sbjct: 278 NSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVL 337

Query: 249 PDKQTFCSALSASAIKGDLRFGKLVHGLILKDGLDIDQQVETALVVLYLRCRCLDLAHKV 308
           PD  TF S L + +   +L + K +H  I++  + +D  + +AL+  Y +CR + +A  +
Sbjct: 338 PDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNI 397

Query: 309 FESTTEKDVVLWTAMISGLVQNDCADKALGVFSQMIESNVELSTATLASALAACAQLGCC 368
           F      DVV++TAMISG + N     +L +F  +++  +  +  TL S L     L   
Sbjct: 398 FSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLAL 457

Query: 369 DIGTSIHGYVLRQGIMLDIPAQNSLVTMYAKCNKLEQSCSIFNKMVEKDLVSWNAIVAGH 428
            +G  +HG+++++G         +++ MYAKC ++  +  IF ++ ++D+VSWN+++   
Sbjct: 458 KLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIVSWNSMITRC 517

Query: 429 AKNGYLSKAIFFFNEMRTSLQRPDSITVTSLLQACGSAGALCQGKWIHNFVLRSSLIPCI 488
           A++   S AI  F +M  S    D +++++ L AC +  +   GK IH F+++ SL   +
Sbjct: 518 AQSDNPSAAIDIFRQMGVSGICYDCVSISAALSACANLPSESFGKAIHGFMIKHSLASDV 577

Query: 489 MTETALVDMYFKCGNLEIAQKCFDYMLQQDLVTWSILIAGYGFNGKGEIALRKYSEFL-G 548
            +E+ L+DMY KCGNL+ A   F  M ++++V+W+ +IA  G +GK + +L  + E +  
Sbjct: 578 YSESTLIDMYAKCGNLKAAMNVFKTMKEKNIVSWNSIIAACGNHGKLKDSLCLFHEMVEK 637

Query: 549 TGMEPNHVIFLSVLSACSHSGLISQGLSIYESMTKDFRMPANLEHRACIIDLLSRAGKVD 608
           +G+ P+ + FL ++S+C H G + +G+  + SMT+D+ +    EH AC++DL  RAG++ 
Sbjct: 638 SGIRPDQITFLEIISSCCHVGDVDEGVRFFRSMTEDYGIQPQQEHYACVVDLFGRAGRLT 697

Query: 609 EAYSFYKMMFKEPSIDVLGILLDACRVNGSVELGKVIARDMFELKPVDAGNFLQLVHSYA 668
           EAY   K M   P   V G LL ACR++ +VEL +V +  + +L P ++G ++ + +++A
Sbjct: 698 EAYETVKSMPFPPDAGVWGTLLGACRLHKNVELAEVASSKLMDLDPSNSGYYVLISNAHA 757

Query: 669 SMSRWDGVEEAWTQMRSLGLKKLPGWSSIEVHGTSFTFFSVHNSHPKIEDIILTVKSLSN 728
           +   W+ V +  + M+   ++K+PG+S IE++  +  F S   +HP+   I   + SL  
Sbjct: 758 NAREWESVTKVRSLMKEREVQKIPGYSWIEINKRTHLFVSGDVNHPESSHIYSLLNSLLG 817

BLAST of Lsi06G000580 vs. TAIR 10
Match: AT3G57430.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 417.2 bits (1071), Expect = 2.9e-116
Identity = 238/718 (33.15%), Postives = 409/718 (56.96%), Query Frame = 0

Query: 32  QVLQTYISFQNTNTPPDAYTFPSLLKACTNLNLFSNGLSIHQSVIVHGLSHDSY-IGSSL 91
           + + TY+        PD Y FP+LLKA  +L     G  IH  V   G   DS  + ++L
Sbjct: 80  EAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTL 139

Query: 92  ISFYAKFGCIQFGRKVFDTMPERNVVPWTTLIGCYSRQGDIDIAFSRFKQMRESGIQPTS 151
           ++ Y K G      KVFD + ERN V W +LI         ++A   F+ M +  ++P+S
Sbjct: 140 VNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSS 199

Query: 152 VTFLSLLPGVSELPLL--LCLHCLIVLYGF---ESDLALSNSMVNMYGKCGRIADARSLF 211
            T +S++   S LP+   L +   +  YG    E +  + N++V MYGK G++A ++ L 
Sbjct: 200 FTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGELNSFIINTLVAMYGKLGKLASSKVLL 259

Query: 212 ESMDYRDIVSWNSLLSAYSKIGGIEEILQLVQGMRIEDIKPDKQTFCSALSASAIKGDLR 271
            S   RD+V+WN++LS+  +   + E L+ ++ M +E ++PD+ T  S L A +    LR
Sbjct: 260 GSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLR 319

Query: 272 FGKLVHGLILKDG-LDIDQQVETALVVLYLRCRCLDLAHKVFESTTEKDVVLWTAMISGL 331
            GK +H   LK+G LD +  V +ALV +Y  C+ +    +VF+   ++ + LW AMI+G 
Sbjct: 320 TGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGY 379

Query: 332 VQNDCADKALGVFSQMIES-NVELSTATLASALAACAQLGCCDIGTSIHGYVLRQGIMLD 391
            QN+   +AL +F  M ES  +  ++ T+A  + AC + G      +IHG+V+++G+  D
Sbjct: 380 SQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRD 439

Query: 392 IPAQNSLVTMYAKCNKLEQSCSIFNKMVEKDLVSWNAIVAGHAKNGYLSKAIFFFNEM-- 451
              QN+L+ MY++  K++ +  IF KM ++DLV+WN ++ G+  + +   A+   ++M  
Sbjct: 440 RFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQN 499

Query: 452 ----------RTSLQRPDSITVTSLLQACGSAGALCQGKWIHNFVLRSSLIPCIMTETAL 511
                     R SL +P+SIT+ ++L +C +  AL +GK IH + ++++L   +   +AL
Sbjct: 500 LERKVSKGASRVSL-KPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSAL 559

Query: 512 VDMYFKCGNLEIAQKCFDYMLQQDLVTWSILIAGYGFNGKGEIALRKYSEFLGTGMEPNH 571
           VDMY KCG L++++K FD + Q++++TW+++I  YG +G G+ A+      +  G++PN 
Sbjct: 560 VDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNE 619

Query: 572 VIFLSVLSACSHSGLISQGLSIYESMTKDFRMPANLEHRACIIDLLSRAGKVDEAYSFYK 631
           V F+SV +ACSHSG++ +GL I+  M  D+ +  + +H AC++DLL RAG++ EAY    
Sbjct: 620 VTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMN 679

Query: 632 MMFKE-PSIDVLGILLDACRVNGSVELGKVIARDMFELKPVDAGNFLQLVHSYASMSRWD 691
           MM ++         LL A R++ ++E+G++ A+++ +L+P  A +++ L + Y+S   WD
Sbjct: 680 MMPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGLWD 739

Query: 692 GVEEAWTQMRSLGLKKLPGWSSIEVHGTSFTFFSVHNSHPKIEDIILTVKSLSNDIRK 729
              E    M+  G++K PG S IE       F +  +SHP+ E +   +++L   +RK
Sbjct: 740 KATEVRRNMKEQGVRKEPGCSWIEHGDEVHKFVAGDSSHPQSEKLSGYLETLWERMRK 796

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Q9XE981.4e-22954.16Pentatricopeptide repeat-containing protein At4g04370 OS=Arabidopsis thaliana OX... [more]
Q3E6Q12.9e-12132.96Pentatricopeptide repeat-containing protein At1g11290, chloroplastic OS=Arabidop... [more]
Q9C5077.3e-11733.14Putative pentatricopeptide repeat-containing protein At1g69350, mitochondrial OS... [more]
Q9STE18.1e-11631.40Pentatricopeptide repeat-containing protein At4g21300 OS=Arabidopsis thaliana OX... [more]
Q7Y2114.0e-11533.15Pentatricopeptide repeat-containing protein At3g57430, chloroplastic OS=Arabidop... [more]
Match NameE-valueIdentityDescription
A0A1S4DUX50.0e+0089.34pentatricopeptide repeat-containing protein At4g04370 OS=Cucumis melo OX=3656 GN... [more]
A0A0A0M0F80.0e+0087.21Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G650050 PE=4 SV=1[more]
A0A6J1E5220.0e+0085.66pentatricopeptide repeat-containing protein At4g04370 OS=Momordica charantia OX=... [more]
A0A6J1EZ220.0e+0085.93pentatricopeptide repeat-containing protein At4g04370 OS=Cucurbita moschata OX=3... [more]
A0A5D3CX330.0e+0089.44Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... [more]
Match NameE-valueIdentityDescription
XP_038878475.10.0e+0094.20pentatricopeptide repeat-containing protein At4g04370 [Benincasa hispida] >XP_03... [more]
XP_016899786.10.0e+0089.34PREDICTED: pentatricopeptide repeat-containing protein At4g04370 [Cucumis melo][more]
XP_004139152.10.0e+0087.21pentatricopeptide repeat-containing protein At4g04370 [Cucumis sativus][more]
XP_022159804.10.0e+0085.66pentatricopeptide repeat-containing protein At4g04370 [Momordica charantia] >XP_... [more]
XP_022931568.10.0e+0085.93pentatricopeptide repeat-containing protein At4g04370 [Cucurbita moschata] >XP_0... [more]
Match NameE-valueIdentityDescription
AT4G04370.11.0e-23054.16Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT1G11290.12.0e-12232.96Pentatricopeptide repeat (PPR) superfamily protein [more]
AT1G69350.15.2e-11833.14Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT4G21300.15.7e-11731.40Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT3G57430.12.9e-11633.15Tetratricopeptide repeat (TPR)-like superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 214..247
e-value: 2.8E-4
score: 18.9
coord: 315..348
e-value: 2.6E-6
score: 25.3
coord: 416..443
e-value: 3.2E-4
score: 18.7
coord: 186..208
e-value: 0.002
score: 16.2
coord: 118..149
e-value: 1.1E-7
score: 29.5
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 517..541
e-value: 0.057
score: 13.7
coord: 552..579
e-value: 0.44
score: 10.9
coord: 214..240
e-value: 0.0016
score: 18.5
coord: 186..211
e-value: 0.001
score: 19.2
coord: 489..513
e-value: 0.11
score: 12.8
coord: 593..615
e-value: 0.02
score: 15.1
coord: 315..345
e-value: 2.6E-6
score: 27.3
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 113..159
e-value: 4.5E-10
score: 39.6
coord: 413..460
e-value: 2.6E-9
score: 37.1
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 181..211
score: 8.516988
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 414..448
score: 10.128299
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 114..148
score: 12.199985
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 212..246
score: 11.147699
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 515..549
score: 9.536388
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 313..347
score: 10.369448
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 265..367
e-value: 1.6E-16
score: 62.6
coord: 13..164
e-value: 2.1E-28
score: 101.6
coord: 368..469
e-value: 2.2E-19
score: 72.0
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 569..700
e-value: 5.3E-10
score: 41.2
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 165..264
e-value: 8.5E-20
score: 72.8
coord: 470..568
e-value: 3.5E-17
score: 64.3
NoneNo IPR availablePANTHERPTHR47928:SF60PPR CONTAINING PLANT-LIKE PROTEINcoord: 115..214
NoneNo IPR availablePANTHERPTHR47928REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATEDcoord: 210..386
NoneNo IPR availablePANTHERPTHR47928REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATEDcoord: 115..214
coord: 9..117
coord: 482..732
NoneNo IPR availablePANTHERPTHR47928:SF60PPR CONTAINING PLANT-LIKE PROTEINcoord: 388..481
coord: 210..386
NoneNo IPR availablePANTHERPTHR47928:SF60PPR CONTAINING PLANT-LIKE PROTEINcoord: 9..117
NoneNo IPR availablePANTHERPTHR47928:SF60PPR CONTAINING PLANT-LIKE PROTEINcoord: 482..732
NoneNo IPR availablePANTHERPTHR47928REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATEDcoord: 388..481

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi06G000580.1Lsi06G000580.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding