MS020780 (gene) Bitter gourd (TR) v1

Overview


Name	MS020780
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	GATA-N domain-containing protein
Location	scaffold487: 446602 .. 448237 (+)
RNA-Seq Expression	MS020780
Synteny	MS020780

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

GCGGTGGCGATTTCGCCGTCCCACGGTGGGTTCCCGCCGCAGGGATGGAACGCGTCGAGGCTTGGCCGGAGGTCCAATTACAGAGTTTCGGCGAAAGCGGCGGCGAGCGGCGAGGAGAGAGAAGACGGCGGCGGAAAAGAGAGGAAGAAGTCGCTGTTCAGCAGCGTGACGGAGGCGCTGGATTTCTCTCAGGTCCGATCGAGCCGCGACGCCGAGTTATTGGAAGACGCCCGGCAGGCCACCAGATCCGGCGGCAGAATGACCCGGGAACAGGTAATGGGTCGACCCGTTTCCTCGACTGATCAACCGTTTAGATAGTATCTAGCATATTTGGAATTGGAAATAAATATTACAAAAATATAGTAAAAAAAAAAAAAAATCTTAATATCTTAATTCATTAATAATAAATGTAGCTATAGTTGATTAATATTTAGATACTGTTAACACATGAAAATAAATAGATACAAAATCGATTAGAAGTCGCTTCTAAAAAAAAAGTACTTTTTTTAAAGTTGTATTTATAATTATTTTAATTACTTCTATCTTAATTTATGGTATGTATTTTTCAAATTTAAATCCCACCCCTTTATTTCAGATGTAATATATAAAAAAGAAAAAAATACTGAACGAAATTAACACATATTATTTCACAATAAAAAATTAAAAAAATTAAATTATTTTGTAAATACTTAAAAAAACTAACAAAACAATGGTAATTGATCATGTCTAAATTGGGGGAGAGATGAGAAGTAATTAACTTAAATGTACATCAAAATTAATTGTGATTGAAGCTTTTTACTTGAGTACTAATTATAATTAAAAGTAATGTGTTGTTAAAACTAGTTTCACTCTAAATGAGGCTTACATTATCATTATGTATGGTCTGAAATTGAATGCAGTATGGAGCTCTTAGAAGGAAGATAGGAGGAACATACAAAGACTTTTTCAAATCTTACATAGAAGGTATGTTTCCCAATCCATAATTTTACATATTTTGATTTTTTAGGTTCATTTTGGGTTCATTTTAATACGTAGTTTTAAAAGTTTCATTATTTTAATTCCTGTACTGCATTGTAGTCCTATACCTTTCGTGTTTTAGTCTGAGTACTTCTAACAAGTGACTATTTTGGTTTCTATTTTCAAAATTTTAACATAAACGTCATACATAATGAAAATCCTTTCATAATTAATGACTAAATTTCAAGAAATTTTGTGCGTGATGTATCATGCCAGATAAAAATGAAAATGAAAGGACCAATGATCTCTTTTAAAAAGTACAAGACCAAAACAGATATTTTGAAAGTATATAGTACTAAAATGATCAAAAGTAACAAGTATAAAGACCAAAATGAATCAAACCGAAAGTACGAGACAAACATAGTTTTTAAACAAAAAAAATAAAAATAAATAAGAAGATCTAATTTTGGGTTGTTTGAATTAATTTTTTTCCCCCTTTCTCTCAGTGGATGGGCAATATGTTGAAGAAGGGTGGGTGGACAAGACATGCAAGGTTTGCAAGAAGGACACAAGGGGAGAGGCAAGACAAGTCGACAAACTTGGAAGATATGTCCATGTTGCTTGTTTGGAGAATTCCAACTCTTCCTCTGGCAATTTCTTCTCCAAGTTCTTCTCCAAA

mRNA sequence

GCGGTGGCGATTTCGCCGTCCCACGGTGGGTTCCCGCCGCAGGGATGGAACGCGTCGAGGCTTGGCCGGAGGTCCAATTACAGAGTTTCGGCGAAAGCGGCGGCGAGCGGCGAGGAGAGAGAAGACGGCGGCGGAAAAGAGAGGAAGAAGTCGCTGTTCAGCAGCGTGACGGAGGCGCTGGATTTCTCTCAGGTCCGATCGAGCCGCGACGCCGAGTTATTGGAAGACGCCCGGCAGGCCACCAGATCCGGCGGCAGAATGACCCGGGAACAGTATGGAGCTCTTAGAAGGAAGATAGGAGGAACATACAAAGACTTTTTCAAATCTTACATAGAAGTGGATGGGCAATATGTTGAAGAAGGGTGGGTGGACAAGACATGCAAGGTTTGCAAGAAGGACACAAGGGGAGAGGCAAGACAAGTCGACAAACTTGGAAGATATGTCCATGTTGCTTGTTTGGAGAATTCCAACTCTTCCTCTGGCAATTTCTTCTCCAAGTTCTTCTCCAAA

Coding sequence (CDS)

GCGGTGGCGATTTCGCCGTCCCACGGTGGGTTCCCGCCGCAGGGATGGAACGCGTCGAGGCTTGGCCGGAGGTCCAATTACAGAGTTTCGGCGAAAGCGGCGGCGAGCGGCGAGGAGAGAGAAGACGGCGGCGGAAAAGAGAGGAAGAAGTCGCTGTTCAGCAGCGTGACGGAGGCGCTGGATTTCTCTCAGGTCCGATCGAGCCGCGACGCCGAGTTATTGGAAGACGCCCGGCAGGCCACCAGATCCGGCGGCAGAATGACCCGGGAACAGTATGGAGCTCTTAGAAGGAAGATAGGAGGAACATACAAAGACTTTTTCAAATCTTACATAGAAGTGGATGGGCAATATGTTGAAGAAGGGTGGGTGGACAAGACATGCAAGGTTTGCAAGAAGGACACAAGGGGAGAGGCAAGACAAGTCGACAAACTTGGAAGATATGTCCATGTTGCTTGTTTGGAGAATTCCAACTCTTCCTCTGGCAATTTCTTCTCCAAGTTCTTCTCCAAA

Protein sequence

AVAISPSHGGFPPQGWNASRLGRRSNYRVSAKAAASGEEREDGGGKERKKSLFSSVTEALDFSQVRSSRDAELLEDARQATRSGGRMTREQYGALRRKIGGTYKDFFKSYIEVDGQYVEEGWVDKTCKVCKKDTRGEARQVDKLGRYVHVACLENSNSSSGNFFSKFFSK

Homology

[Close]

BLAST of MS020780 vs. NCBI nr
Match: XP_022146826.1 (uncharacterized protein LOC111015936 [Momordica charantia])

HSP 1 Score: 334.0 bits (855), Expect = 7.8e-88
Identity = 169/170 (99.41%), Postives = 169/170 (99.41%), Query Frame = 0


Query: 1   AVAISPSHGGFPPQGWNASRLGRRSNYRVSAKAAASGEEREDGGGKERKKSLFSSVTEAL 60
           AVAISPSHGGFPPQGWNASRLGRRSNYRVSAKAAASGEEREDGGGKERKKSLFSSVTEAL
Sbjct: 5   AVAISPSHGGFPPQGWNASRLGRRSNYRVSAKAAASGEEREDGGGKERKKSLFSSVTEAL 64

Query: 61  DFSQVRSSRDAELLEDARQATRSGGRMTREQYGALRRKIGGTYKDFFKSYIEVDGQYVEE 120
           DFSQVRSSRDAELLEDARQATRSGGRMTREQYGALRRKIGGTYKDFFKSYIEVDGQYVEE
Sbjct: 65  DFSQVRSSRDAELLEDARQATRSGGRMTREQYGALRRKIGGTYKDFFKSYIEVDGQYVEE 124

Query: 121 GWVDKTCKVCKKDTRGEARQVDKLGRYVHVACLENSNSSSGNFFSKFFSK 171
           GWVDKTCKVCKKDTRGEARQVDKLG YVHVACLENSNSSSGNFFSKFFSK
Sbjct: 125 GWVDKTCKVCKKDTRGEARQVDKLGTYVHVACLENSNSSSGNFFSKFFSK 174

[Close]

BLAST of MS020780 vs. NCBI nr
Match: XP_038891315.1 (uncharacterized protein LOC120080762 [Benincasa hispida])

HSP 1 Score: 275.0 bits (702), Expect = 4.3e-70
Identity = 148/175 (84.57%), Postives = 151/175 (86.29%), Query Frame = 0


Query: 2   VAISPSHGGFPP---QGWNA--SRLGRRSNYRVSAKAAASGEERED-GGGKERKKSLFSS 61
           VAISPSHGGFP    QGW     R  R SN RV AKAA  GEERE  GGG E KKSLFSS
Sbjct: 2   VAISPSHGGFPSQLRQGWKTVRGRPDRSSNLRVLAKAAEKGEERESGGGGGENKKSLFSS 61

Query: 62  VTEALDFSQVRSSRDAELLEDARQATRSGGRMTREQYGALRRKIGGTYKDFFKSYIEVDG 121
           VTEALDFS VRSSRDAELL+DARQAT++GGRMTREQYGALRRKIGGTYKDFFKSYIEVDG
Sbjct: 62  VTEALDFSAVRSSRDAELLDDARQATKAGGRMTREQYGALRRKIGGTYKDFFKSYIEVDG 121

Query: 122 QYVEEGWVDKTCKVCKKDTRGEARQVDKLGRYVHVACLENSNSSSGNFFSKFFSK 171
           QYVEEGWVDKTCKVCKKDTRGEARQVDKLGRYVHVACLE S SSSGNFFSK FSK
Sbjct: 122 QYVEEGWVDKTCKVCKKDTRGEARQVDKLGRYVHVACLEKSKSSSGNFFSKLFSK 176

[Close]

BLAST of MS020780 vs. NCBI nr
Match: XP_022941869.1 (uncharacterized protein LOC111447101 [Cucurbita moschata] >KAG6599950.1 hypothetical protein SDJN03_05183, partial [Cucurbita argyrosperma subsp. sororia] >KAG7030630.1 hypothetical protein SDJN02_04667, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 265.8 bits (678), Expect = 2.6e-67
Identity = 140/175 (80.00%), Postives = 151/175 (86.29%), Query Frame = 0


Query: 2   VAISPSHGGFPP---QGWNASR---LGRRSNYRVSAKAAASGEEREDGGGKERKKSLFSS 61
           VAISPSH GF     QGW  +R     R SN RVSAK+   GEE+EDGG ++ K+SLFSS
Sbjct: 2   VAISPSHVGFTSQFGQGWKTAREMTPVRSSNLRVSAKSTEKGEEKEDGGERKNKQSLFSS 61

Query: 62  VTEALDFSQVRSSRDAELLEDARQATRSGGRMTREQYGALRRKIGGTYKDFFKSYIEVDG 121
           VTEALDFSQVRSSRDAELL+DARQAT++GGRM+REQYGALRRKIGGTYKDFFKSYIEVDG
Sbjct: 62  VTEALDFSQVRSSRDAELLDDARQATKAGGRMSREQYGALRRKIGGTYKDFFKSYIEVDG 121

Query: 122 QYVEEGWVDKTCKVCKKDTRGEARQVDKLGRYVHVACLENSNSSSGNFFSKFFSK 171
           QYVEEGWVDKTCKVCKKDTRGEARQVDKLGRY HVACLE SNSSS NFF+KFF K
Sbjct: 122 QYVEEGWVDKTCKVCKKDTRGEARQVDKLGRYAHVACLEKSNSSSPNFFTKFFFK 176

[Close]

BLAST of MS020780 vs. NCBI nr
Match: XP_023532465.1 (uncharacterized protein LOC111794620 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 264.6 bits (675), Expect = 5.8e-67
Identity = 140/175 (80.00%), Postives = 150/175 (85.71%), Query Frame = 0


Query: 2   VAISPSHGGFPP---QGWNASR---LGRRSNYRVSAKAAASGEEREDGGGKERKKSLFSS 61
           VAISPSH GF     QGW  +R     R SN RVSAKA   GEE+ED G ++ K+SLFSS
Sbjct: 2   VAISPSHVGFTSQFGQGWKTAREMTPVRSSNLRVSAKATEKGEEKEDAGERKNKQSLFSS 61

Query: 62  VTEALDFSQVRSSRDAELLEDARQATRSGGRMTREQYGALRRKIGGTYKDFFKSYIEVDG 121
           VTEALDFSQVRSSRDAELL+DARQAT++GGRM+REQYGALRRKIGGTYKDFFKSYIEVDG
Sbjct: 62  VTEALDFSQVRSSRDAELLDDARQATKAGGRMSREQYGALRRKIGGTYKDFFKSYIEVDG 121

Query: 122 QYVEEGWVDKTCKVCKKDTRGEARQVDKLGRYVHVACLENSNSSSGNFFSKFFSK 171
           QYVEEGWVDKTCKVCKKDTRGEARQVDKLGRY HVACLE SNSSS NFF+KFF K
Sbjct: 122 QYVEEGWVDKTCKVCKKDTRGEARQVDKLGRYAHVACLEKSNSSSPNFFTKFFFK 176

[Close]

BLAST of MS020780 vs. NCBI nr
Match: XP_008456929.1 (PREDICTED: uncharacterized protein LOC103496731 [Cucumis melo] >XP_016902036.1 PREDICTED: uncharacterized protein LOC103496731 [Cucumis melo] >KAA0067508.1 uncharacterized protein E6C27_scaffold50G00230 [Cucumis melo var. makuwa] >TYK22436.1 uncharacterized protein E5676_scaffold530G00350 [Cucumis melo var. makuwa])

HSP 1 Score: 264.6 bits (675), Expect = 5.8e-67
Identity = 145/175 (82.86%), Postives = 150/175 (85.71%), Query Frame = 0


Query: 2   VAISPSHGGFPP---QGWNASR---LGRRSNYRVSAKAAASGEEREDGGGKERKKSLFSS 61
           VAISPSHGGFP    QGW + R     R SN RV A+    GEERE  GG E KKSLFSS
Sbjct: 2   VAISPSHGGFPSQLGQGWKSVRGRPDRRSSNLRVMAE---KGEERESVGG-ENKKSLFSS 61

Query: 62  VTEALDFSQVRSSRDAELLEDARQATRSGGRMTREQYGALRRKIGGTYKDFFKSYIEVDG 121
           VTEALDFS VRSSRDAELL+DARQAT++GGRMTREQYGALRRKIGGTYKDFFKSYIEVDG
Sbjct: 62  VTEALDFSAVRSSRDAELLDDARQATKAGGRMTREQYGALRRKIGGTYKDFFKSYIEVDG 121

Query: 122 QYVEEGWVDKTCKVCKKDTRGEARQVDKLGRYVHVACLENSNSSSGNFFSKFFSK 171
           QYVEEGWVDKTCKVCKKDTRGEARQVDKLGRYVHVACLE SNSSSGNFFSK FSK
Sbjct: 122 QYVEEGWVDKTCKVCKKDTRGEARQVDKLGRYVHVACLEKSNSSSGNFFSKLFSK 172

[Close]

BLAST of MS020780 vs. ExPASy TrEMBL
Match: A0A6J1D0J3 (uncharacterized protein LOC111015936 OS=Momordica charantia OX=3673 GN=LOC111015936 PE=4 SV=1)

HSP 1 Score: 334.0 bits (855), Expect = 3.8e-88
Identity = 169/170 (99.41%), Postives = 169/170 (99.41%), Query Frame = 0


Query: 1   AVAISPSHGGFPPQGWNASRLGRRSNYRVSAKAAASGEEREDGGGKERKKSLFSSVTEAL 60
           AVAISPSHGGFPPQGWNASRLGRRSNYRVSAKAAASGEEREDGGGKERKKSLFSSVTEAL
Sbjct: 5   AVAISPSHGGFPPQGWNASRLGRRSNYRVSAKAAASGEEREDGGGKERKKSLFSSVTEAL 64

Query: 61  DFSQVRSSRDAELLEDARQATRSGGRMTREQYGALRRKIGGTYKDFFKSYIEVDGQYVEE 120
           DFSQVRSSRDAELLEDARQATRSGGRMTREQYGALRRKIGGTYKDFFKSYIEVDGQYVEE
Sbjct: 65  DFSQVRSSRDAELLEDARQATRSGGRMTREQYGALRRKIGGTYKDFFKSYIEVDGQYVEE 124

Query: 121 GWVDKTCKVCKKDTRGEARQVDKLGRYVHVACLENSNSSSGNFFSKFFSK 171
           GWVDKTCKVCKKDTRGEARQVDKLG YVHVACLENSNSSSGNFFSKFFSK
Sbjct: 125 GWVDKTCKVCKKDTRGEARQVDKLGTYVHVACLENSNSSSGNFFSKFFSK 174

[Close]

BLAST of MS020780 vs. ExPASy TrEMBL
Match: A0A6J1FPP4 (uncharacterized protein LOC111447101 OS=Cucurbita moschata OX=3662 GN=LOC111447101 PE=4 SV=1)

HSP 1 Score: 265.8 bits (678), Expect = 1.3e-67
Identity = 140/175 (80.00%), Postives = 151/175 (86.29%), Query Frame = 0


Query: 2   VAISPSHGGFPP---QGWNASR---LGRRSNYRVSAKAAASGEEREDGGGKERKKSLFSS 61
           VAISPSH GF     QGW  +R     R SN RVSAK+   GEE+EDGG ++ K+SLFSS
Sbjct: 2   VAISPSHVGFTSQFGQGWKTAREMTPVRSSNLRVSAKSTEKGEEKEDGGERKNKQSLFSS 61

Query: 62  VTEALDFSQVRSSRDAELLEDARQATRSGGRMTREQYGALRRKIGGTYKDFFKSYIEVDG 121
           VTEALDFSQVRSSRDAELL+DARQAT++GGRM+REQYGALRRKIGGTYKDFFKSYIEVDG
Sbjct: 62  VTEALDFSQVRSSRDAELLDDARQATKAGGRMSREQYGALRRKIGGTYKDFFKSYIEVDG 121

Query: 122 QYVEEGWVDKTCKVCKKDTRGEARQVDKLGRYVHVACLENSNSSSGNFFSKFFSK 171
           QYVEEGWVDKTCKVCKKDTRGEARQVDKLGRY HVACLE SNSSS NFF+KFF K
Sbjct: 122 QYVEEGWVDKTCKVCKKDTRGEARQVDKLGRYAHVACLEKSNSSSPNFFTKFFFK 176

[Close]

BLAST of MS020780 vs. ExPASy TrEMBL
Match: A0A1S3C3X8 (uncharacterized protein LOC103496731 OS=Cucumis melo OX=3656 GN=LOC103496731 PE=4 SV=1)

HSP 1 Score: 264.6 bits (675), Expect = 2.8e-67
Identity = 145/175 (82.86%), Postives = 150/175 (85.71%), Query Frame = 0


Query: 2   VAISPSHGGFPP---QGWNASR---LGRRSNYRVSAKAAASGEEREDGGGKERKKSLFSS 61
           VAISPSHGGFP    QGW + R     R SN RV A+    GEERE  GG E KKSLFSS
Sbjct: 2   VAISPSHGGFPSQLGQGWKSVRGRPDRRSSNLRVMAE---KGEERESVGG-ENKKSLFSS 61

Query: 62  VTEALDFSQVRSSRDAELLEDARQATRSGGRMTREQYGALRRKIGGTYKDFFKSYIEVDG 121
           VTEALDFS VRSSRDAELL+DARQAT++GGRMTREQYGALRRKIGGTYKDFFKSYIEVDG
Sbjct: 62  VTEALDFSAVRSSRDAELLDDARQATKAGGRMTREQYGALRRKIGGTYKDFFKSYIEVDG 121

Query: 122 QYVEEGWVDKTCKVCKKDTRGEARQVDKLGRYVHVACLENSNSSSGNFFSKFFSK 171
           QYVEEGWVDKTCKVCKKDTRGEARQVDKLGRYVHVACLE SNSSSGNFFSK FSK
Sbjct: 122 QYVEEGWVDKTCKVCKKDTRGEARQVDKLGRYVHVACLEKSNSSSGNFFSKLFSK 172

[Close]

BLAST of MS020780 vs. ExPASy TrEMBL
Match: A0A5D3DFR3 (GATA-N domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold530G00350 PE=4 SV=1)

HSP 1 Score: 264.6 bits (675), Expect = 2.8e-67
Identity = 145/175 (82.86%), Postives = 150/175 (85.71%), Query Frame = 0


Query: 2   VAISPSHGGFPP---QGWNASR---LGRRSNYRVSAKAAASGEEREDGGGKERKKSLFSS 61
           VAISPSHGGFP    QGW + R     R SN RV A+    GEERE  GG E KKSLFSS
Sbjct: 2   VAISPSHGGFPSQLGQGWKSVRGRPDRRSSNLRVMAE---KGEERESVGG-ENKKSLFSS 61

Query: 62  VTEALDFSQVRSSRDAELLEDARQATRSGGRMTREQYGALRRKIGGTYKDFFKSYIEVDG 121
           VTEALDFS VRSSRDAELL+DARQAT++GGRMTREQYGALRRKIGGTYKDFFKSYIEVDG
Sbjct: 62  VTEALDFSAVRSSRDAELLDDARQATKAGGRMTREQYGALRRKIGGTYKDFFKSYIEVDG 121

Query: 122 QYVEEGWVDKTCKVCKKDTRGEARQVDKLGRYVHVACLENSNSSSGNFFSKFFSK 171
           QYVEEGWVDKTCKVCKKDTRGEARQVDKLGRYVHVACLE SNSSSGNFFSK FSK
Sbjct: 122 QYVEEGWVDKTCKVCKKDTRGEARQVDKLGRYVHVACLEKSNSSSGNFFSKLFSK 172

[Close]

BLAST of MS020780 vs. ExPASy TrEMBL
Match: A0A0A0KM41 (GATA-N domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G220390 PE=4 SV=1)

HSP 1 Score: 263.8 bits (673), Expect = 4.8e-67
Identity = 143/175 (81.71%), Postives = 150/175 (85.71%), Query Frame = 0


Query: 2   VAISPSHGGFPP---QGWNASR---LGRRSNYRVSAKAAASGEEREDGGGKERKKSLFSS 61
           VAI PSHGGFP    QGW + R     R SN RV A+    GEERE GGG E KKSLFSS
Sbjct: 2   VAICPSHGGFPSQLGQGWKSVRGRPDRRSSNLRVRAE---KGEERESGGG-ENKKSLFSS 61

Query: 62  VTEALDFSQVRSSRDAELLEDARQATRSGGRMTREQYGALRRKIGGTYKDFFKSYIEVDG 121
           VTEALDFS VRS+RDAELL+DARQAT++GGRM+REQYGALRRKIGGTYKDFFKSYIEVDG
Sbjct: 62  VTEALDFSAVRSTRDAELLDDARQATKAGGRMSREQYGALRRKIGGTYKDFFKSYIEVDG 121

Query: 122 QYVEEGWVDKTCKVCKKDTRGEARQVDKLGRYVHVACLENSNSSSGNFFSKFFSK 171
           QYVEEGWVDKTCKVCKKDTRGEARQVDKLGRYVHVACLE SNSS GNFFSKFFSK
Sbjct: 122 QYVEEGWVDKTCKVCKKDTRGEARQVDKLGRYVHVACLEKSNSSPGNFFSKFFSK 172

[Close]

BLAST of MS020780 vs. TAIR 10
Match: AT3G56290.1 (unknown protein; Has 39 Blast hits to 39 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 39; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 199.1 bits (505), Expect = 2.8e-51
Identity = 98/137 (71.53%), Postives = 118/137 (86.13%), Query Frame = 0


Query: 34  AASGEEREDGGGKERKKSLFSSVTEALDFSQVRSSRDAELLEDARQATRSGGRMTREQYG 93
           +A  E+ ED    E + SLF+ +T+ALDFSQVRS +DAELL +AR+AT+SG +MT+EQYG
Sbjct: 39  SAKQEKDEDKKKNEEETSLFTQLTDALDFSQVRSEKDAELLYEAREATKSGRKMTQEQYG 98

Query: 94  ALRRKIGGTYKDFFKSYIEVDGQYVEEGWVDKTCKVCKKDTRGEARQVDKLGRYVHVACL 153
           ALRRKIGGTYKDFFKSY+EVDGQYVEEGWVDKTCK+CKKDT+GEARQVDKLGRY HV+CL
Sbjct: 99  ALRRKIGGTYKDFFKSYVEVDGQYVEEGWVDKTCKICKKDTKGEARQVDKLGRYAHVSCL 158

Query: 154 ENSNSSSGNFFSKFFSK 171
           +  N  SGNFF++ FS+
Sbjct: 159 Q--NPPSGNFFTRLFSR 173

The following BLAST results are available for this feature:

BLAST of MS020780 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022146826.1	7.8e-88	99.41	uncharacterized protein LOC111015936 [Momordica charantia]	[more]
XP_038891315.1	4.3e-70	84.57	uncharacterized protein LOC120080762 [Benincasa hispida]	[more]
XP_022941869.1	2.6e-67	80.00	uncharacterized protein LOC111447101 [Cucurbita moschata] >KAG6599950.1 hypothet...	[more]
XP_023532465.1	5.8e-67	80.00	uncharacterized protein LOC111794620 [Cucurbita pepo subsp. pepo]	[more]
XP_008456929.1	5.8e-67	82.86	PREDICTED: uncharacterized protein LOC103496731 [Cucumis melo] >XP_016902036.1 P...	[more]

BLAST of MS020780 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MS020780 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1D0J3	3.8e-88	99.41	uncharacterized protein LOC111015936 OS=Momordica charantia OX=3673 GN=LOC111015...	[more]
A0A6J1FPP4	1.3e-67	80.00	uncharacterized protein LOC111447101 OS=Cucurbita moschata OX=3662 GN=LOC1114471...	[more]
A0A1S3C3X8	2.8e-67	82.86	uncharacterized protein LOC103496731 OS=Cucumis melo OX=3656 GN=LOC103496731 PE=...	[more]
A0A5D3DFR3	2.8e-67	82.86	GATA-N domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676...	[more]
A0A0A0KM41	4.8e-67	81.71	GATA-N domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G220390 PE=4...	[more]

BLAST of MS020780 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G56290.1	2.8e-51	71.53	unknown protein; Has 39 Blast hits to 39 proteins in 15 species: Archae - 0; Bac...	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008013	GATA-type transcription activator, N-terminal	PFAM	PF05349	GATA-N	coord: 54..113 e-value: 5.0E-4 score: 20.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 34..50
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..50
None	No IPR available	PANTHER	PTHR36771	POTASSIUM TRANSPORTER	coord: 19..170

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS020780.1	MS020780.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045893	positive regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0008270	zinc ion binding