MS020780 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.GCGGTGGCGATTTCGCCGTCCCACGGTGGGTTCCCGCCGCAGGGATGGAACGCGTCGAGGCTTGGCCGGAGGTCCAATTACAGAGTTTCGGCGAAAGCGGCGGCGAGCGGCGAGGAGAGAGAAGACGGCGGCGGAAAAGAGAGGAAGAAGTCGCTGTTCAGCAGCGTGACGGAGGCGCTGGATTTCTCTCAGGTCCGATCGAGCCGCGACGCCGAGTTATTGGAAGACGCCCGGCAGGCCACCAGATCCGGCGGCAGAATGACCCGGGAACAGGTAATGGGTCGACCCGTTTCCTCGACTGATCAACCGTTTAGATAGTATCTAGCATATTTGGAATTGGAAATAAATATTACAAAAATATAGTAAAAAAAAAAAAAAATCTTAATATCTTAATTCATTAATAATAAATGTAGCTATAGTTGATTAATATTTAGATACTGTTAACACATGAAAATAAATAGATACAAAATCGATTAGAAGTCGCTTCTAAAAAAAAAGTACTTTTTTTAAAGTTGTATTTATAATTATTTTAATTACTTCTATCTTAATTTATGGTATGTATTTTTCAAATTTAAATCCCACCCCTTTATTTCAGATGTAATATATAAAAAAGAAAAAAATACTGAACGAAATTAACACATATTATTTCACAATAAAAAATTAAAAAAATTAAATTATTTTGTAAATACTTAAAAAAACTAACAAAACAATGGTAATTGATCATGTCTAAATTGGGGGAGAGATGAGAAGTAATTAACTTAAATGTACATCAAAATTAATTGTGATTGAAGCTTTTTACTTGAGTACTAATTATAATTAAAAGTAATGTGTTGTTAAAACTAGTTTCACTCTAAATGAGGCTTACATTATCATTATGTATGGTCTGAAATTGAATGCAGTATGGAGCTCTTAGAAGGAAGATAGGAGGAACATACAAAGACTTTTTCAAATCTTACATAGAAGGTATGTTTCCCAATCCATAATTTTACATATTTTGATTTTTTAGGTTCATTTTGGGTTCATTTTAATACGTAGTTTTAAAAGTTTCATTATTTTAATTCCTGTACTGCATTGTAGTCCTATACCTTTCGTGTTTTAGTCTGAGTACTTCTAACAAGTGACTATTTTGGTTTCTATTTTCAAAATTTTAACATAAACGTCATACATAATGAAAATCCTTTCATAATTAATGACTAAATTTCAAGAAATTTTGTGCGTGATGTATCATGCCAGATAAAAATGAAAATGAAAGGACCAATGATCTCTTTTAAAAAGTACAAGACCAAAACAGATATTTTGAAAGTATATAGTACTAAAATGATCAAAAGTAACAAGTATAAAGACCAAAATGAATCAAACCGAAAGTACGAGACAAACATAGTTTTTAAACAAAAAAAATAAAAATAAATAAGAAGATCTAATTTTGGGTTGTTTGAATTAATTTTTTTCCCCCTTTCTCTCAGTGGATGGGCAATATGTTGAAGAAGGGTGGGTGGACAAGACATGCAAGGTTTGCAAGAAGGACACAAGGGGAGAGGCAAGACAAGTCGACAAACTTGGAAGATATGTCCATGTTGCTTGTTTGGAGAATTCCAACTCTTCCTCTGGCAATTTCTTCTCCAAGTTCTTCTCCAAA GCGGTGGCGATTTCGCCGTCCCACGGTGGGTTCCCGCCGCAGGGATGGAACGCGTCGAGGCTTGGCCGGAGGTCCAATTACAGAGTTTCGGCGAAAGCGGCGGCGAGCGGCGAGGAGAGAGAAGACGGCGGCGGAAAAGAGAGGAAGAAGTCGCTGTTCAGCAGCGTGACGGAGGCGCTGGATTTCTCTCAGGTCCGATCGAGCCGCGACGCCGAGTTATTGGAAGACGCCCGGCAGGCCACCAGATCCGGCGGCAGAATGACCCGGGAACAGTATGGAGCTCTTAGAAGGAAGATAGGAGGAACATACAAAGACTTTTTCAAATCTTACATAGAAGTGGATGGGCAATATGTTGAAGAAGGGTGGGTGGACAAGACATGCAAGGTTTGCAAGAAGGACACAAGGGGAGAGGCAAGACAAGTCGACAAACTTGGAAGATATGTCCATGTTGCTTGTTTGGAGAATTCCAACTCTTCCTCTGGCAATTTCTTCTCCAAGTTCTTCTCCAAA GCGGTGGCGATTTCGCCGTCCCACGGTGGGTTCCCGCCGCAGGGATGGAACGCGTCGAGGCTTGGCCGGAGGTCCAATTACAGAGTTTCGGCGAAAGCGGCGGCGAGCGGCGAGGAGAGAGAAGACGGCGGCGGAAAAGAGAGGAAGAAGTCGCTGTTCAGCAGCGTGACGGAGGCGCTGGATTTCTCTCAGGTCCGATCGAGCCGCGACGCCGAGTTATTGGAAGACGCCCGGCAGGCCACCAGATCCGGCGGCAGAATGACCCGGGAACAGTATGGAGCTCTTAGAAGGAAGATAGGAGGAACATACAAAGACTTTTTCAAATCTTACATAGAAGTGGATGGGCAATATGTTGAAGAAGGGTGGGTGGACAAGACATGCAAGGTTTGCAAGAAGGACACAAGGGGAGAGGCAAGACAAGTCGACAAACTTGGAAGATATGTCCATGTTGCTTGTTTGGAGAATTCCAACTCTTCCTCTGGCAATTTCTTCTCCAAGTTCTTCTCCAAA AVAISPSHGGFPPQGWNASRLGRRSNYRVSAKAAASGEEREDGGGKERKKSLFSSVTEALDFSQVRSSRDAELLEDARQATRSGGRMTREQYGALRRKIGGTYKDFFKSYIEVDGQYVEEGWVDKTCKVCKKDTRGEARQVDKLGRYVHVACLENSNSSSGNFFSKFFSK Homology
BLAST of MS020780 vs. NCBI nr
Match: XP_022146826.1 (uncharacterized protein LOC111015936 [Momordica charantia]) HSP 1 Score: 334.0 bits (855), Expect = 7.8e-88 Identity = 169/170 (99.41%), Postives = 169/170 (99.41%), Query Frame = 0
BLAST of MS020780 vs. NCBI nr
Match: XP_038891315.1 (uncharacterized protein LOC120080762 [Benincasa hispida]) HSP 1 Score: 275.0 bits (702), Expect = 4.3e-70 Identity = 148/175 (84.57%), Postives = 151/175 (86.29%), Query Frame = 0
BLAST of MS020780 vs. NCBI nr
Match: XP_022941869.1 (uncharacterized protein LOC111447101 [Cucurbita moschata] >KAG6599950.1 hypothetical protein SDJN03_05183, partial [Cucurbita argyrosperma subsp. sororia] >KAG7030630.1 hypothetical protein SDJN02_04667, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 265.8 bits (678), Expect = 2.6e-67 Identity = 140/175 (80.00%), Postives = 151/175 (86.29%), Query Frame = 0
BLAST of MS020780 vs. NCBI nr
Match: XP_023532465.1 (uncharacterized protein LOC111794620 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 264.6 bits (675), Expect = 5.8e-67 Identity = 140/175 (80.00%), Postives = 150/175 (85.71%), Query Frame = 0
BLAST of MS020780 vs. NCBI nr
Match: XP_008456929.1 (PREDICTED: uncharacterized protein LOC103496731 [Cucumis melo] >XP_016902036.1 PREDICTED: uncharacterized protein LOC103496731 [Cucumis melo] >KAA0067508.1 uncharacterized protein E6C27_scaffold50G00230 [Cucumis melo var. makuwa] >TYK22436.1 uncharacterized protein E5676_scaffold530G00350 [Cucumis melo var. makuwa]) HSP 1 Score: 264.6 bits (675), Expect = 5.8e-67 Identity = 145/175 (82.86%), Postives = 150/175 (85.71%), Query Frame = 0
BLAST of MS020780 vs. ExPASy TrEMBL
Match: A0A6J1D0J3 (uncharacterized protein LOC111015936 OS=Momordica charantia OX=3673 GN=LOC111015936 PE=4 SV=1) HSP 1 Score: 334.0 bits (855), Expect = 3.8e-88 Identity = 169/170 (99.41%), Postives = 169/170 (99.41%), Query Frame = 0
BLAST of MS020780 vs. ExPASy TrEMBL
Match: A0A6J1FPP4 (uncharacterized protein LOC111447101 OS=Cucurbita moschata OX=3662 GN=LOC111447101 PE=4 SV=1) HSP 1 Score: 265.8 bits (678), Expect = 1.3e-67 Identity = 140/175 (80.00%), Postives = 151/175 (86.29%), Query Frame = 0
BLAST of MS020780 vs. ExPASy TrEMBL
Match: A0A1S3C3X8 (uncharacterized protein LOC103496731 OS=Cucumis melo OX=3656 GN=LOC103496731 PE=4 SV=1) HSP 1 Score: 264.6 bits (675), Expect = 2.8e-67 Identity = 145/175 (82.86%), Postives = 150/175 (85.71%), Query Frame = 0
BLAST of MS020780 vs. ExPASy TrEMBL
Match: A0A5D3DFR3 (GATA-N domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold530G00350 PE=4 SV=1) HSP 1 Score: 264.6 bits (675), Expect = 2.8e-67 Identity = 145/175 (82.86%), Postives = 150/175 (85.71%), Query Frame = 0
BLAST of MS020780 vs. ExPASy TrEMBL
Match: A0A0A0KM41 (GATA-N domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G220390 PE=4 SV=1) HSP 1 Score: 263.8 bits (673), Expect = 4.8e-67 Identity = 143/175 (81.71%), Postives = 150/175 (85.71%), Query Frame = 0
BLAST of MS020780 vs. TAIR 10
Match: AT3G56290.1 (unknown protein; Has 39 Blast hits to 39 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 39; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 199.1 bits (505), Expect = 2.8e-51 Identity = 98/137 (71.53%), Postives = 118/137 (86.13%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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