CSPI04G17360 (gene) Cucumber (PI 183967) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.CTTTTGCTTTAAGATTGCCCTTCTTTTTCTGTCTGTATCAGCAGTAAGGATTGTGCTTAGAGTTATCAAACGACTCTCAAATGAGTGTCTTAAGTTAAAAGAGTTAAAAGACGCTGCAAAAGAACACAACTATGGCGTCTCGATTGCAGCAGATCGAAAAGGATGAATCTGTGCTCTTGCGTGTCACCCATGCCAATCTCAAGTCCTTCACATCTGATGTTCGTTTTTCCCTTCAGGTTTGTATCATTTCTAAAGACCAGGCATCTCTTTTTAGCCTTTCCCGATTGCCCATTATGGGTTTTTATCTAAATTTGATGCTGGGGTTCTTCCATTGTAGATGAGCGTGGAGTCTGTCAAGGAAAAATTGTGGAGAAAATGTGGTACTTCTGTGAACTCTATGTGCCTCGAACTCTACGATGATTCCGGTTCTAAAATTTCCGATTTGACGGATAATTGCATTCCCTTGGGCTTCTATTCTCCCTTAGATGGGTACTTGTTCTTCTTGTTCTTCCATTTTCTTTCAATCATTTCTTTACTTGGTTTCGTTTTCCACTCTGTTAACTGCAATTCATATTGTTTCATTGATTAGAAACTCTGCTAATTTAATGGTTTTTATAAGCAGAATATGCTTTTTATGAGAATATGTGCTTTCTCTTGGAAAGGTACCGGCTGCATATTATTGATCTTGACCCCTCATCAGTTACTTCTGGTGGTTGGCTTGAAGATACCTCACTAGTGGAGAAGTTCCAGATCTCTGAAGAAGCCTATGATAAACGTGATGGTTAGTTTCTTGCCAAGCTTCCTGCATCATTAATGAAGTTTGCATGTAATTCTCTCAATTGCTTATCAAATAGGCTACGCTGAAGGCCTCCCCTCACACCCAATGACAATTGTTGGTCAGCCACAAGAATCATTAAACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAAAGAAAGAAAGAAAGAAAAGAAGAAAAGGCTTAGGCACTGGGACCTAGGGATCTGCAGTAGACAACTACCTTCCAACTGTCTTGAATTTGCATTTCGTGGTTCTATTTAAAAAGCTTTTGGGATAGTAAAGCTGTGCTTACATATTTAAATAATGGAAGGAAAAAAGTGTAGACGATTGATCACTATATGATGCAATTGTTTTTTCTTATTGCCTTAGATTCAATCACTTGAATGCTTCATTAACTTTCCCTTCATTAGCTCTCCCTTCCTCTATAAGAACCAATTGGATACATATATTCTGTATCTCTTGTGGTTAGCAGCCTGTTGTGTGTTTCATTATTTAAATGAAATAATCCTCAAGGCATTGTGCATGGTTTACCTTCTTCTTATGGTTTCTTTTTTCAGACACATTTAGAAAATTTAAAGAAAAATTGGCATCCCAGAATCCTTCAGCATTTGAGAGTAAAGTAAGCCTCATGTTTTCTACTTTTGCTAACAATATGAATGTCCAGAGAAATTTTATTCATTTGCGCCCTGCCAGAACTATAAATTTTGATGTAGACACTACCTATTACTTTATTTAGTTCATGGCTTTTAAAGTAGAGATCTGTGCCGGGCATCTCAGTTTTTTTTTTAATTCTTTTTTATTTTATTACTTTGGTGTGTGTGTGTTCTGAATGATGATGCTGAGGCTGCATGGTATTTCTGCTCATGGTAGAATTGGAAACGTGTATCCTTCTTCTTGTCTTAGTATCCTTGAGCTCTGGTTTTTGTTCTGCGTCTCTAAGAAATTTAGGGACATGTCCATCTCTATTCTAGTCATGCTTGGTCTATTCTTACTGAGTAGCAAAATATTTGCAGATATCTGATAACTACATGGAAGAGCTCTGTGCAAATATTAAGGTTAGTTACCTTCCTTGCTTTAGAAGTGTATAATGGATGTATTCAACTATAAACTTCTTATATTAAACTTTAAAGAGTTGAATTGTCAACTGTCATGATGAAAGAAATGAATTATGTGGATCAAAATTATGTGAACGAGATTGAAAGTTAATTGACTTCCATTTTCCCCAGAGGGGTTTAGAAAATTTTTAGAATGGTGCAGTATTTGTTACTTGGTCAGGTGATTCCTAAGCGTAATTTTCCAGTCATATATTTATGTTGTCTTTTTTCTCTTTTGGAATGAGAACAACTTCTCATTAATATATGAAAAAAGGAAGAATGATCTTCAAGGATACAAGCTCCAATGGGAACAAAAATGTACAATACAAACAGAAAGGATCCTAAAAATACATGAGGATAAAACAATGAATAACACCTAGCGAAGCAATAAAAATCACAGCCAATAATCTGCATAATAGAGCACCCTCTTCAGCTTTTATGTCAGAAACTTTGAAGGAGGACAGTATAACCAAGGCACAATTGCAGCTTTTGACCCAAAATAATGTAGCCAAGAAACAATTTCTTCTGAAACACTTCTTGCATTTGATAGAGGTAGTGCCAACAGACCAAGATCTTTGGGACTGGAAAATAAAATTTCCTCTAAAACATTCTGAGTCAGCTTAAGAAGAAACCCGATATCAAAATTCATTCTAAGGAGAACACTACCATATTCGTTTGTTAAGTACCAAATTGCTTATTCTGTAAAGCAAATTGTATCAAAGTACCTAGAGTTGATTGCTTTGAAGTTTCCCAAGATCTCTAATATGCTGTGAATAATATTCGTTGAGGGAATAGTAAAAGTATTAATTAACCTTTTATCTGATGTGAATGAGGTTGAATTTCAAGCATCTGAAAACTGAAAATCTCAATAAGAGATGAAATTTTGTTAGGATTTGAGGGAGTGGACTCTTTAAGTTCATTGACTGCTGAGAGATCTCTTTCATTATTTAAAGCCAAACCACTTCATGTAAAGCTGATTCAATAACACTGGGAGAAATTACACCTTTGAAGGTGGCTACTGATCATGTCCATTTCAAATATGTTATCATTCTTTGATTAACTTTAACCTGCAAATTCCTCTCCAAGTTTCATGAAGATGAACAACTTTTGCTTCTAAGACTAGGGCAGCTGACTGAACTGCGGGAATCACAAGTCCCAGGCAATCTTCTTAGATAGTATGTGTACTAGCCTCCGAGACTTCAGCAATGTTTTTGAGAAGACACAAAGTAGACATGCTAATAAGTAATAAATGCTCCCTTTTCTTATTACCTCGTAAATCACACAGTGTAGTCAGTGTTGACTTCTGAGTTCTGATATGTAGCATTCTTTTGAGTCTTATGTCCGGAAACTATATATTATAGGTAATGTATTTACACTCTGCTCCTTGAAATCCTGTTGTCCGGTTGTACTAAACTTGACTTTTACATGATGTAGGTTGGTGATAGATGTCAAGTTGAACCCGGGGAGAAACGGGGTGTTGTGAAATTTGTTGGCCGGGCTGAATCGCTTGCTCCTGGTTTTTGGGTTGGAGTTCAATATGATGAACCATTGGGAAAAAATGATGGCACGTAAGATGACCCTTGTGATTAATTTGTTTTTCATTGTCTCTGAAGGGACGATTGACTTGTTTTTCCCAGTTCCTACTATCTGCTTCTATTCTTCCTTATAAGAAACTTTAGTTCTTGAATGTTCACTAAAATTTTTTACCCTTCCTTTTAAAGGGAGAAAAAACATTACTACGAAATATGAACATTGGAGCACATAACCTATCAATGCCCCCCTAATTTGGAAAAATTGTTTTTATTTTAGATATAGCTGTTCTGCCAGAACCGTTTTTACTCTGATCATTCTCAAATTCTTTAGGATTTTGTGCATTATATATATGGATACTTTGTATGCTACTTCTCGTGTTATAATTTGATAAAATTATCATCATTCATTTGTGTTGATTAAAAAGTTCTTATTGGTCTTAGAATCCACCTTTTACGCAATAAAGTAATCTTCCTGGTTTCAAGTTTTTCCTCCCCACTTTAGAGATTTTGATCACATATTCTGTGGGCTAAATGTGTAAAACTCCGCAGGGTAAAAGGGATCCACTATTTTGACTGCTCTCCTTTTCATGGTGCGATGGTTAGGCCTGACAAAGTGAAGGTTCGATTTTCTGCTCCATTAATCTGTTTTCCAACTTTAAAGCTTCAAAGTATGTTACATGAAATAGTTTTTTTTCCTGAACTTGGTATAATATCACATGCTTTAAATTCTTAAAAAGTAATTTATTGCTTTAGGAAAGTCAGCTTGTGGATTTGTAAATATACTACAGATGTATCTTATATTATTGGATTTCCTCAACATATTACAATATAGATGTTGATGATATATAATTAAATTTGCCTTCAACTACAGGCTTAAGCTTTTGGGTGAATTGGTGGTTTAATATGGTATCAGAGCAGGTGGTCCAAGGAGGTCCTAGTGTTCAACCCCTTGCATTGTCGTTTCCTCCCCAAGTAAAATCGATTTCCACTTGTTGGCCTTTCAAATATTTCAAGCCCACAAGTGAGGGGGAATGTTGGTGATATATAAAGAAATTTGTCTTCCAACACAAGCTTAAGCTTTTGGGTGAATTGGTGGTTTAATAATAAAAATACAATTTCTCACAAAATTCTTGATCACATATGATCAATCAAACTTATAGCAACAGAAAACACAAACAACTCTAAACAGAAATGCAAGAAAGAAAAAATCACAAAGAACTAAGATCCAACATTAGGGACCTGGATCCTTCTTCCTCTCTTGGTGCGCAAGGAGGAATGCAGCCTCTGCTTCTCCAGAAAATATCTTCAATGCTCTCCCCCTTCTCATTCCTTTTCTTTTATTCTAA CTTTTGCTTTAAGATTGCCCTTCTTTTTCTGTCTGTATCAGCAGTAAGGATTGTGCTTAGAGTTATCAAACGACTCTCAAATGAGTGTCTTAAGTTAAAAGAGTTAAAAGACGCTGCAAAAGAACACAACTATGGCGTCTCGATTGCAGCAGATCGAAAAGGATGAATCTGTGCTCTTGCGTGTCACCCATGCCAATCTCAAGTCCTTCACATCTGATGTTCGTTTTTCCCTTCAGATGAGCGTGGAGTCTGTCAAGGAAAAATTGTGGAGAAAATGTGGTACTTCTGTGAACTCTATGTGCCTCGAACTCTACGATGATTCCGGTTCTAAAATTTCCGATTTGACGGATAATTGCATTCCCTTGGGCTTCTATTCTCCCTTAGATGGGTACCGGCTGCATATTATTGATCTTGACCCCTCATCAGTTACTTCTGGTGGTTGGCTTGAAGATACCTCACTAGTGGAGAAGTTCCAGATCTCTGAAGAAGCCTATGATAAACGTGATGACACATTTAGAAAATTTAAAGAAAAATTGGCATCCCAGAATCCTTCAGCATTTGAGAGTAAAATATCTGATAACTACATGGAAGAGCTCTGTGCAAATATTAAGGTTGGTGATAGATGTCAAGTTGAACCCGGGGAGAAACGGGGTGTTGTGAAATTTGTTGGCCGGGCTGAATCGCTTGCTCCTGGTTTTTGGGTTGGAGTTCAATATGATGAACCATTGGGAAAAAATGATGGCACGGTAAAAGGGATCCACTATTTTGACTGCTCTCCTTTTCATGGTGCGATGGTTAGGCCTGACAAAGTGAAGGTTCGATTTTCTGCTCCATTAATCTGTTTTCCAACTTTAAAGCTTCAAAGCTTAAGCTTTTGGGTGAATTGGTGGTTTAATATGGTATCAGAGCAGGTGGTCCAAGGAGGTCCTAGTGTTCAACCCCTTGCATTGTCGTTTCCTCCCCAAGGACCTGGATCCTTCTTCCTCTCTTGGTGCGCAAGGAGGAATGCAGCCTCTGCTTCTCCAGAAAATATCTTCAATGCTCTCCCCCTTCTCATTCCTTTTCTTTTATTCTAA ATGGCGTCTCGATTGCAGCAGATCGAAAAGGATGAATCTGTGCTCTTGCGTGTCACCCATGCCAATCTCAAGTCCTTCACATCTGATGTTCGTTTTTCCCTTCAGATGAGCGTGGAGTCTGTCAAGGAAAAATTGTGGAGAAAATGTGGTACTTCTGTGAACTCTATGTGCCTCGAACTCTACGATGATTCCGGTTCTAAAATTTCCGATTTGACGGATAATTGCATTCCCTTGGGCTTCTATTCTCCCTTAGATGGGTACCGGCTGCATATTATTGATCTTGACCCCTCATCAGTTACTTCTGGTGGTTGGCTTGAAGATACCTCACTAGTGGAGAAGTTCCAGATCTCTGAAGAAGCCTATGATAAACGTGATGACACATTTAGAAAATTTAAAGAAAAATTGGCATCCCAGAATCCTTCAGCATTTGAGAGTAAAATATCTGATAACTACATGGAAGAGCTCTGTGCAAATATTAAGGTTGGTGATAGATGTCAAGTTGAACCCGGGGAGAAACGGGGTGTTGTGAAATTTGTTGGCCGGGCTGAATCGCTTGCTCCTGGTTTTTGGGTTGGAGTTCAATATGATGAACCATTGGGAAAAAATGATGGCACGGTAAAAGGGATCCACTATTTTGACTGCTCTCCTTTTCATGGTGCGATGGTTAGGCCTGACAAAGTGAAGGTTCGATTTTCTGCTCCATTAATCTGTTTTCCAACTTTAAAGCTTCAAAGCTTAAGCTTTTGGGTGAATTGGTGGTTTAATATGGTATCAGAGCAGGTGGTCCAAGGAGGTCCTAGTGTTCAACCCCTTGCATTGTCGTTTCCTCCCCAAGGACCTGGATCCTTCTTCCTCTCTTGGTGCGCAAGGAGGAATGCAGCCTCTGCTTCTCCAGAAAATATCTTCAATGCTCTCCCCCTTCTCATTCCTTTTCTTTTATTCTAA MASRLQQIEKDESVLLRVTHANLKSFTSDVRFSLQMSVESVKEKLWRKCGTSVNSMCLELYDDSGSKISDLTDNCIPLGFYSPLDGYRLHIIDLDPSSVTSGGWLEDTSLVEKFQISEEAYDKRDDTFRKFKEKLASQNPSAFESKISDNYMEELCANIKVGDRCQVEPGEKRGVVKFVGRAESLAPGFWVGVQYDEPLGKNDGTVKGIHYFDCSPFHGAMVRPDKVKVRFSAPLICFPTLKLQSLSFWVNWWFNMVSEQVVQGGPSVQPLALSFPPQGPGSFFLSWCARRNAASASPENIFNALPLLIPFLLF* Homology
BLAST of CSPI04G17360 vs. ExPASy Swiss-Prot
Match: Q67Z52 (Tubulin-folding cofactor B OS=Arabidopsis thaliana OX=3702 GN=TFCB PE=1 SV=1) HSP 1 Score: 358.2 bits (918), Expect = 9.4e-98 Identity = 170/229 (74.24%), Postives = 197/229 (86.03%), Query Frame = 0
BLAST of CSPI04G17360 vs. ExPASy Swiss-Prot
Match: Q20728 (Tubulin-specific chaperone B OS=Caenorhabditis elegans OX=6239 GN=tbcb-1 PE=1 SV=1) HSP 1 Score: 154.1 bits (388), Expect = 2.7e-36 Identity = 88/213 (41.31%), Postives = 123/213 (57.75%), Query Frame = 0
BLAST of CSPI04G17360 vs. ExPASy Swiss-Prot
Match: Q5E951 (Tubulin-folding cofactor B OS=Bos taurus OX=9913 GN=TBCB PE=2 SV=1) HSP 1 Score: 138.7 bits (348), Expect = 1.2e-31 Identity = 85/219 (38.81%), Postives = 121/219 (55.25%), Query Frame = 0
BLAST of CSPI04G17360 vs. ExPASy Swiss-Prot
Match: Q9D1E6 (Tubulin-folding cofactor B OS=Mus musculus OX=10090 GN=Tbcb PE=1 SV=2) HSP 1 Score: 138.3 bits (347), Expect = 1.5e-31 Identity = 86/221 (38.91%), Postives = 122/221 (55.20%), Query Frame = 0
BLAST of CSPI04G17360 vs. ExPASy Swiss-Prot
Match: Q99426 (Tubulin-folding cofactor B OS=Homo sapiens OX=9606 GN=TBCB PE=1 SV=2) HSP 1 Score: 137.5 bits (345), Expect = 2.6e-31 Identity = 86/219 (39.27%), Postives = 121/219 (55.25%), Query Frame = 0
BLAST of CSPI04G17360 vs. ExPASy TrEMBL
Match: A0A0A0L346 (CAP-Gly domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G354120 PE=4 SV=1) HSP 1 Score: 505.0 bits (1299), Expect = 2.3e-139 Identity = 247/257 (96.11%), Postives = 252/257 (98.05%), Query Frame = 0
BLAST of CSPI04G17360 vs. ExPASy TrEMBL
Match: A0A1S3C118 (tubulin-folding cofactor B isoform X1 OS=Cucumis melo OX=3656 GN=LOC103495804 PE=4 SV=1) HSP 1 Score: 492.7 bits (1267), Expect = 1.2e-135 Identity = 241/245 (98.37%), Postives = 243/245 (99.18%), Query Frame = 0
BLAST of CSPI04G17360 vs. ExPASy TrEMBL
Match: A0A1S3C1L1 (tubulin-folding cofactor B isoform X2 OS=Cucumis melo OX=3656 GN=LOC103495804 PE=4 SV=1) HSP 1 Score: 463.0 bits (1190), Expect = 1.0e-126 Identity = 227/229 (99.13%), Postives = 227/229 (99.13%), Query Frame = 0
BLAST of CSPI04G17360 vs. ExPASy TrEMBL
Match: A0A6J1DKD2 (tubulin-folding cofactor B OS=Momordica charantia OX=3673 GN=LOC111021286 PE=4 SV=1) HSP 1 Score: 444.1 bits (1141), Expect = 4.8e-121 Identity = 215/229 (93.89%), Postives = 222/229 (96.94%), Query Frame = 0
BLAST of CSPI04G17360 vs. ExPASy TrEMBL
Match: A0A6J1HTU0 (tubulin-folding cofactor B OS=Cucurbita maxima OX=3661 GN=LOC111466096 PE=4 SV=1) HSP 1 Score: 437.2 bits (1123), Expect = 5.9e-119 Identity = 214/229 (93.45%), Postives = 220/229 (96.07%), Query Frame = 0
BLAST of CSPI04G17360 vs. NCBI nr
Match: XP_008455690.1 (PREDICTED: tubulin-folding cofactor B isoform X1 [Cucumis melo]) HSP 1 Score: 492.7 bits (1267), Expect = 2.4e-135 Identity = 241/245 (98.37%), Postives = 243/245 (99.18%), Query Frame = 0
BLAST of CSPI04G17360 vs. NCBI nr
Match: XP_004142648.1 (tubulin-folding cofactor B [Cucumis sativus] >KAE8649611.1 hypothetical protein Csa_012598 [Cucumis sativus]) HSP 1 Score: 469.2 bits (1206), Expect = 2.9e-128 Identity = 229/229 (100.00%), Postives = 229/229 (100.00%), Query Frame = 0
BLAST of CSPI04G17360 vs. NCBI nr
Match: XP_008455691.1 (PREDICTED: tubulin-folding cofactor B isoform X2 [Cucumis melo]) HSP 1 Score: 463.0 bits (1190), Expect = 2.1e-126 Identity = 227/229 (99.13%), Postives = 227/229 (99.13%), Query Frame = 0
BLAST of CSPI04G17360 vs. NCBI nr
Match: XP_022153874.1 (tubulin-folding cofactor B [Momordica charantia]) HSP 1 Score: 444.1 bits (1141), Expect = 9.9e-121 Identity = 215/229 (93.89%), Postives = 222/229 (96.94%), Query Frame = 0
BLAST of CSPI04G17360 vs. NCBI nr
Match: XP_038889058.1 (tubulin-folding cofactor B [Benincasa hispida]) HSP 1 Score: 442.6 bits (1137), Expect = 2.9e-120 Identity = 215/229 (93.89%), Postives = 223/229 (97.38%), Query Frame = 0
BLAST of CSPI04G17360 vs. TAIR 10
Match: AT3G10220.1 (tubulin folding cofactor B ) HSP 1 Score: 358.2 bits (918), Expect = 6.7e-99 Identity = 170/229 (74.24%), Postives = 197/229 (86.03%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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