Cp4.1LG10g11150.1 (mRNA) Cucurbita pepo (MU‐CU‐16) v4.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AAAAATCGAAACCTTGGATTTGGGGATGATCTTGACAGCAACATGGCGACCCTTGAGGCTTCCCTTCTTCGCCTTAGCTCTGCAAGTGAACCCAAAATGGCCGCGCCCTACTTCTTCCCCAATCTCATAATGCGCCACAAATTGCTTCGAATATCCAAACTCCCTATTCACCTCAACGACCTCGCTGTCGCCGTTGCCTTCTTCAGGAATCGGGGCCTGATTCGGCTTAGCAGAGCCATGGCGTCGTGCGAGAAGTTCCTTGATGTGTTTCGCCGGCGAAGGCGGCGGGAACGGCCTGGACCGGCGTTTGGCACCGCCGGATGGCGAGTTCTTGAACACGCTAGACAGAGGACTCGGAGTGAAGAACGGAAAATTGGAAGGGGAGTTTCTGGTGTGTGAATCGGCGTTGTCCTCGCATTTCGCCTTAGGGTTTGCGGTCACCTTCGAATGGCAAATTCCCATGGATTTGGAACCCTAGGAGCACAATCGAAAGGGGATAATCAATCACTGAGATGAAGGAGCTTCTTCCATGGGAGAGAGACCTCGAAGGTACCGTTTCTTTGAACTTCTCTAATAATGGCAATGGCAAAGGAGAAATCAATGGCGAAATTAGAAGAAGAAGAGAGAGTTAGTGAGGATCGTAAACGTATTGTTTTCCTTAATGGTTTATTCTGCAATGTTTGTGATAGGTAATCCCAACAAGAATCACTACAAGACGAACATCATGGGAGCAGAAATCAAGGCAAAGAACAAGCAAAGAGGGAAACCAGAACACGTTAATGAGGCCCAGGTGAGACAGAACACAATACAAAATTCTATATTTCATTGCAACTTACAAGTTTAATACTCAAATTTCTGATGATTGTGTGGCCCTATGCTTTATAAATTACTATACTTTGGACCCACCAATGCTTATCTGCTTTGCTTTGTTTAAAACGTCCAATATAGTACCTATGGTAAACCGTAAAATACACCTTAGAGTCCGCATTCTCAGATTTTGCCCTCTTCTTCCTTTCTTGCTCTGATTGTCACCACGTCCACCCTTCTTTTACAGCCACCATCGAACCCCTCGCTCTTGATTCTAAAACCTCTATCTTGAGTCTCTATAGCCCATAACCCATGGTTGTTTCTCCGATTCTACTCTCTATAGACCTCTTTTTGAATTTTTCAGTTCCAAGTTTCACATTGGTTCAAATCCAATGCTCAACTTGCGGGAGGTGTTAAAGATATTTAGAATTCCATTACGGTTTACTATAGATACCATATTTGATCTTTTATTAAAGACAAATATCTAGATATTTATCTTCCATTACCGTTTACCATAAGTACCATATTTGACATTCTATTGTAGACCAATATCTTGTATCCATTTATACCTTTATAATTTATTTGATGATTATAAATAGAGAATTTCACCACCATTTAGGTGGGATGATTTTAGCAAATATTCCCAGTTTCAAGATTTAGAGTCTATTTAAAATGACCTTATGCTCATAAAGTCATTTTCAACGTGTCCTTAGATCTAAAAACAACATAGTTTGGACCATATTTACATCATAATCTAATCATCGAAGTTTAGGAGTTGAATTTGCAACGAGTTTAAACCTAGTTTTAAAAATGTTGGAGCCTAAAGTAGGATATAATCTAATCATATACCATTCAACTATATGAAATAAAAAGGTGGGAAAGTGAGGAAAATGGTTACCAATGTTAGGCAACACATATTATCTCCACTTTCTCTTCTTTTTGTAAGCTTTATATGTGGTGACAAACGAGTTATATTTTATTTTGGTAACAAAGAATGGAAGAATAATGGAAGTGGGGTTGAGGTTTGGCTTGGATCCTTCTATTCCAGGCTGTCTTTGTTGGGTTATCACAAACACCAAGAAAGATAGAATATATATATATATATATATCTATATAAGTTCAATTTCTTGCTTGAGCTTTGCAACAAGATATATATAGTTTATTGAATGACCTTTTGTTTGTATATGAGCTTTTCAGACCTGCTGCCTCCTTTCTCTTTTTCTTTTGTGATTTCAAAAGCTCTTGTTCTTATGTCTTTGGTGGATTTGAATGTGAATGAGGTTCGTGAAATTGTTTGAATTTGTCGATATCATTGTATCGTAGTTTTACCTAAATAATTTTAATTCAACTCATCAAACAATACCATGTTAGAGATTATGAGACTTTAGAAGCGTAGATTGAAAGTTGAAGCATCACTTTTTAGATTCCGTTTGATGACCATTTATGTGAGATTCCACATCGGTTAGAGAGGGGAATGAAACATTCTTTAGAAGGGGTGTGAAAACTTCTTCCTAGCAGACGCGTTTTAAAAACCTTGAGGGGAATCCCAAAAGAGAAAGTCTAAAAAGGACAATATCTGCTAGCGGTGAGCTTGGCTGTTACAAATGGTATCATAGCCAGACACTGGGCCACGAAGGGGGTGGATTGTGAGACCTCACCTCGGTTGGAGGGGGAAACAAAACATTCTTTATAAGGGTGTGGAAACATGTCCCTAGCAGACGTGTTTTAAAAACCTTGAGAGGAAGTCCAAAAGGGAAAGTCTAAAGAGAACAATATCTACTTGCGGCGGGTATGGGCCGTTACAAAATGGTATCAGAACTAGACACTAGGCAGTATGTGAGCGAGGACACTGGGCCCCAAAGGGGGTGGATTGTGAGATCTCACATTGGTCGGAGAGGAAGACCAAACATTTTTTTCTTTTGGTTGTTATCAACCCTCTTTACCCTAATTTTTTAAAACTAAGAACTGTAGGGTGGATTTTGCTTCAAATTTTTAATAATTGTGGTCATTGCTGAAACATCATTTTTCTCATTGTCAGAAAAGGGAGAAAAATGTAGAATTCTTTGGTTTTGCATCCAACTACCACATGGATGGTATAGACTTTGCTTTTTTAGACAAAGAGTGGATAACCTACCAATTTTGATCAAGATCTTCCCTCTCTTCTTCTTCACCACGTACTAGAACAACCAATCCAAGCCTAACTTGACGAGTCAAGTAAAAGAAGAGGTATATGAGAGATCACATTCAAATGATAGCGACCCTTGGAATAAGATGACTAAGAAATACTTAAAAAAATGAAAATTACTAGCTATAGTAATAAAATACACTTTTATTTTCGATGACTCAATGATAGGAACTTCATGGTTATTAGAGCAATTTTATGTCAAGTGACCTCTTAGGAATGTACGTAGGATACATGCGAGTGATGACAAAATTTGCTGAAAGAATTTGTGTTGGTACGTGGGGATAGTCTTCACTTTTAGAAGTGAGTAGTAAGTAATGTTGGGGTCATTCGTGCTAAATCCATACTCTGAATTCTTATTCAAATTATGGGTATGGACCATTACAATTGTCATGAATTTAAATCTTATATTACACCATAATTTAAATTTTGATTTTGGTAAGTTTCTTATACAAAAGTTCTATCGTTGGGAAATTTTATGTCATGTTCAAACAAAATCTAATCGATAGATGTGAATTATTTTTATTAATTTGAAATTGGATTGAAATTTTTTAAGTATATTATAACTAATGGAGATGTCAAAACATACTTTAATATTTTGTGTATACATTTATATCCTAAGTTTGCATTTAATACTATTTTGGTCTTTTCATCTAACACTTCATTATTAAGTATCTTATAAGATCTCAGGTGACAACGTTCTTTTTTATAATTAAATTAAATATTTTTTATATTTTAAAATAGAAATATATTCTATAATTTCTAAATTAATTAATTAATTTTTTATTTTTACTTTTTCTTTTATTTAATTTATCTTTCATTCTTTTCCCTTTTCCCATCTTCTCCATCCTCTCATCAATGGTCATCTTGACTAAGGGAAAAAGTGAGAAAAAAAGGGAAGAGAGGGAAAATAATAATAATAATAATAATAATATATATATATATATATAAATAAAAATGAGGGAGGAATCTTCCACCAGGCTCTATTTTTAATGCCAATTTACTTTATTTATTTATTTAAAAAGGAAAACTTATTTCAAATTTAACATAATTTGGTTTAGATAAAGTCCTTTTAAAATTCTAATCAATTAGGTTTTTGTGTATAATGTTTTGGGGTTTGGAAATTACTTTAAAGACCATTTTTATTAAATTTTTTAACCAATTATATATTTTAGCAATATATTTTTTAATATATATATATATATATATATAAAAGCACCGGAAAGTATAAGAAAATGAAAAGAAAAGATATTTTTTAAATATAAGTCAAGCTTATTGACTCACAACTAGTTCTTTTCTTATGAACATCTTCTACATAAACAGACCACCACCTTTTGATCGAGATGCTACCGTTCCTCCCATCAATCATCGAGTTAGACTAGTAGCAGTCGCCGGTGGATACACACTCTTTCATGATCTCTCTCTTACCCCTCACCCTCACTCTTTCATGTTGAGAGGGGTGTCATCTGTTAGTACTGTACACTGTGTGAAGTTGTTATCTAGGGTTTTAGAATTGAGCTATTTTCTTGTTTTTTTTTTTTCTCGGTAAGAAACCATTGATTCTGAATCAACACTTGAATTGAATACAAATCTATTTAAGTTGAAG AAAAATCGAAACCTTGGATTTGGGGATGATCTTGACAGCAACATGGCGACCCTTGAGGCTTCCCTTCTTCGCCTTAGCTCTGCAAGTGAACCCAAAATGGCCGCGCCCTACTTCTTCCCCAATCTCATAATGCGCCACAAATTGCTTCGAATATCCAAACTCCCTATTCACCTCAACGACCTCGCTGTCGCCGTTGCCTTCTTCAGGAATCGGGGCCTGATTCGGCTTAGCAGAGCCATGGCGTCGTGCGAGAAGTTCCTTGATGTGTTTCGCCGGCGAAGGCGGCGGGAACGGCCTGGACCGGCGTTTGGCACCGCCGGATGGCGAGTTCTTGAACACGCTAGACAGAGGACTCGGAGTGAAGAACGGAAAATTGGAAGGGGAGTTTCTGGTAATCCCAACAAGAATCACTACAAGACGAACATCATGGGAGCAGAAATCAAGGCAAAGAACAAGCAAAGAGGGAAACCAGAACACGTTAATGAGGCCCAGACCACCACCTTTTGATCGAGATGCTACCGTTCCTCCCATCAATCATCGAGTTAGACTAGTAGCAGTCGCCGGTGGATACACACTCTTTCATGATCTCTCTCTTACCCCTCACCCTCACTCTTTCATGTTGAGAGGGGTGTCATCTGTTAGTACTGTACACTGTGTGAAGTTGTTATCTAGGGTTTTAGAATTGAGCTATTTTCTTGTTTTTTTTTTTTCTCGGTAAGAAACCATTGATTCTGAATCAACACTTGAATTGAATACAAATCTATTTAAGTTGAAG AAAAATCGAAACCTTGGATTTGGGGATGATCTTGACAGCAACATGGCGACCCTTGAGGCTTCCCTTCTTCGCCTTAGCTCTGCAAGTGAACCCAAAATGGCCGCGCCCTACTTCTTCCCCAATCTCATAATGCGCCACAAATTGCTTCGAATATCCAAACTCCCTATTCACCTCAACGACCTCGCTGTCGCCGTTGCCTTCTTCAGGAATCGGGGCCTGATTCGGCTTAGCAGAGCCATGGCGTCGTGCGAGAAGTTCCTTGATGTGTTTCGCCGGCGAAGGCGGCGGGAACGGCCTGGACCGGCGTTTGGCACCGCCGGATGGCGAGTTCTTGAACACGCTAGACAGAGGACTCGGAGTGAAGAACGGAAAATTGGAAGGGGAGTTTCTGGTAATCCCAACAAGAATCACTACAAGACGAACATCATGGGAGCAGAAATCAAGGCAAAGAACAAGCAAAGAGGGAAACCAGAACACGTTAATGAGGCCCAGACCACCACCTTTTGA KNRNLGFGDDLDSNMATLEASLLRLSSASEPKMAAPYFFPNLIMRHKLLRISKLPIHLNDLAVAVAFFRNRGLIRLSRAMASCEKFLDVFRRRRRRERPGPAFGTAGWRVLEHARQRTRSEERKIGRGVSGNPNKNHYKTNIMGAEIKAKNKQRGKPEHVNEAQTTTF Homology
BLAST of Cp4.1LG10g11150.1 vs. NCBI nr
Match: KAG6603302.1 (hypothetical protein SDJN03_03911, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 75.9 bits (185), Expect = 1.82e-14 Identity = 36/40 (90.00%), Postives = 37/40 (92.50%), Query Frame = 0
BLAST of Cp4.1LG10g11150.1 vs. ExPASy TrEMBL
Match: A0A7C9AWR7 (Uncharacterized protein OS=Opuntia streptacantha OX=393608 PE=4 SV=1) HSP 1 Score: 60.1 bits (144), Expect = 8.80e-08 Identity = 44/115 (38.26%), Postives = 59/115 (51.30%), Query Frame = 0
BLAST of Cp4.1LG10g11150.1 vs. ExPASy TrEMBL
Match: B9F8K7 (Uncharacterized protein OS=Oryza sativa subsp. japonica OX=39947 GN=OsJ_10963 PE=4 SV=1) HSP 1 Score: 49.7 bits (117), Expect = 9.74e-04 Identity = 34/95 (35.79%), Postives = 53/95 (55.79%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
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