Cp4.1LG10g11150 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG10g11150
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	Unknown protein
Location	Cp4.1LG10: 7669657 .. 7674251 (+)
RNA-Seq Expression	Cp4.1LG10g11150
Synteny	Cp4.1LG10g11150

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAAATCGAAACCTTGGATTTGGGGATGATCTTGACAGCAACATGGCGACCCTTGAGGCTTCCCTTCTTCGCCTTAGCTCTGCAAGTGAACCCAAAATGGCCGCGCCCTACTTCTTCCCCAATCTCATAATGCGCCACAAATTGCTTCGAATATCCAAACTCCCTATTCACCTCAACGACCTCGCTGTCGCCGTTGCCTTCTTCAGGAATCGGGGCCTGATTCGGCTTAGCAGAGCCATGGCGTCGTGCGAGAAGTTCCTTGATGTGTTTCGCCGGCGAAGGCGGCGGGAACGGCCTGGACCGGCGTTTGGCACCGCCGGATGGCGAGTTCTTGAACACGCTAGACAGAGGACTCGGAGTGAAGAACGGAAAATTGGAAGGGGAGTTTCTGGTGTGTGAATCGGCGTTGTCCTCGCATTTCGCCTTAGGGTTTGCGGTCACCTTCGAATGGCAAATTCCCATGGATTTGGAACCCTAGGAGCACAATCGAAAGGGGATAATCAATCACTGAGATGAAGGAGCTTCTTCCATGGGAGAGAGACCTCGAAGGTACCGTTTCTTTGAACTTCTCTAATAATGGCAATGGCAAAGGAGAAATCAATGGCGAAATTAGAAGAAGAAGAGAGAGTTAGTGAGGATCGTAAACGTATTGTTTTCCTTAATGGTTTATTCTGCAATGTTTGTGATAGGTAATCCCAACAAGAATCACTACAAGACGAACATCATGGGAGCAGAAATCAAGGCAAAGAACAAGCAAAGAGGGAAACCAGAACACGTTAATGAGGCCCAGGTGAGACAGAACACAATACAAAATTCTATATTTCATTGCAACTTACAAGTTTAATACTCAAATTTCTGATGATTGTGTGGCCCTATGCTTTATAAATTACTATACTTTGGACCCACCAATGCTTATCTGCTTTGCTTTGTTTAAAACGTCCAATATAGTACCTATGGTAAACCGTAAAATACACCTTAGAGTCCGCATTCTCAGATTTTGCCCTCTTCTTCCTTTCTTGCTCTGATTGTCACCACGTCCACCCTTCTTTTACAGCCACCATCGAACCCCTCGCTCTTGATTCTAAAACCTCTATCTTGAGTCTCTATAGCCCATAACCCATGGTTGTTTCTCCGATTCTACTCTCTATAGACCTCTTTTTGAATTTTTCAGTTCCAAGTTTCACATTGGTTCAAATCCAATGCTCAACTTGCGGGAGGTGTTAAAGATATTTAGAATTCCATTACGGTTTACTATAGATACCATATTTGATCTTTTATTAAAGACAAATATCTAGATATTTATCTTCCATTACCGTTTACCATAAGTACCATATTTGACATTCTATTGTAGACCAATATCTTGTATCCATTTATACCTTTATAATTTATTTGATGATTATAAATAGAGAATTTCACCACCATTTAGGTGGGATGATTTTAGCAAATATTCCCAGTTTCAAGATTTAGAGTCTATTTAAAATGACCTTATGCTCATAAAGTCATTTTCAACGTGTCCTTAGATCTAAAAACAACATAGTTTGGACCATATTTACATCATAATCTAATCATCGAAGTTTAGGAGTTGAATTTGCAACGAGTTTAAACCTAGTTTTAAAAATGTTGGAGCCTAAAGTAGGATATAATCTAATCATATACCATTCAACTATATGAAATAAAAAGGTGGGAAAGTGAGGAAAATGGTTACCAATGTTAGGCAACACATATTATCTCCACTTTCTCTTCTTTTTGTAAGCTTTATATGTGGTGACAAACGAGTTATATTTTATTTTGGTAACAAAGAATGGAAGAATAATGGAAGTGGGGTTGAGGTTTGGCTTGGATCCTTCTATTCCAGGCTGTCTTTGTTGGGTTATCACAAACACCAAGAAAGATAGAATATATATATATATATATATCTATATAAGTTCAATTTCTTGCTTGAGCTTTGCAACAAGATATATATAGTTTATTGAATGACCTTTTGTTTGTATATGAGCTTTTCAGACCTGCTGCCTCCTTTCTCTTTTTCTTTTGTGATTTCAAAAGCTCTTGTTCTTATGTCTTTGGTGGATTTGAATGTGAATGAGGTTCGTGAAATTGTTTGAATTTGTCGATATCATTGTATCGTAGTTTTACCTAAATAATTTTAATTCAACTCATCAAACAATACCATGTTAGAGATTATGAGACTTTAGAAGCGTAGATTGAAAGTTGAAGCATCACTTTTTAGATTCCGTTTGATGACCATTTATGTGAGATTCCACATCGGTTAGAGAGGGGAATGAAACATTCTTTAGAAGGGGTGTGAAAACTTCTTCCTAGCAGACGCGTTTTAAAAACCTTGAGGGGAATCCCAAAAGAGAAAGTCTAAAAAGGACAATATCTGCTAGCGGTGAGCTTGGCTGTTACAAATGGTATCATAGCCAGACACTGGGCCACGAAGGGGGTGGATTGTGAGACCTCACCTCGGTTGGAGGGGGAAACAAAACATTCTTTATAAGGGTGTGGAAACATGTCCCTAGCAGACGTGTTTTAAAAACCTTGAGAGGAAGTCCAAAAGGGAAAGTCTAAAGAGAACAATATCTACTTGCGGCGGGTATGGGCCGTTACAAAATGGTATCAGAACTAGACACTAGGCAGTATGTGAGCGAGGACACTGGGCCCCAAAGGGGGTGGATTGTGAGATCTCACATTGGTCGGAGAGGAAGACCAAACATTTTTTTCTTTTGGTTGTTATCAACCCTCTTTACCCTAATTTTTTAAAACTAAGAACTGTAGGGTGGATTTTGCTTCAAATTTTTAATAATTGTGGTCATTGCTGAAACATCATTTTTCTCATTGTCAGAAAAGGGAGAAAAATGTAGAATTCTTTGGTTTTGCATCCAACTACCACATGGATGGTATAGACTTTGCTTTTTTAGACAAAGAGTGGATAACCTACCAATTTTGATCAAGATCTTCCCTCTCTTCTTCTTCACCACGTACTAGAACAACCAATCCAAGCCTAACTTGACGAGTCAAGTAAAAGAAGAGGTATATGAGAGATCACATTCAAATGATAGCGACCCTTGGAATAAGATGACTAAGAAATACTTAAAAAAATGAAAATTACTAGCTATAGTAATAAAATACACTTTTATTTTCGATGACTCAATGATAGGAACTTCATGGTTATTAGAGCAATTTTATGTCAAGTGACCTCTTAGGAATGTACGTAGGATACATGCGAGTGATGACAAAATTTGCTGAAAGAATTTGTGTTGGTACGTGGGGATAGTCTTCACTTTTAGAAGTGAGTAGTAAGTAATGTTGGGGTCATTCGTGCTAAATCCATACTCTGAATTCTTATTCAAATTATGGGTATGGACCATTACAATTGTCATGAATTTAAATCTTATATTACACCATAATTTAAATTTTGATTTTGGTAAGTTTCTTATACAAAAGTTCTATCGTTGGGAAATTTTATGTCATGTTCAAACAAAATCTAATCGATAGATGTGAATTATTTTTATTAATTTGAAATTGGATTGAAATTTTTTAAGTATATTATAACTAATGGAGATGTCAAAACATACTTTAATATTTTGTGTATACATTTATATCCTAAGTTTGCATTTAATACTATTTTGGTCTTTTCATCTAACACTTCATTATTAAGTATCTTATAAGATCTCAGGTGACAACGTTCTTTTTTATAATTAAATTAAATATTTTTTATATTTTAAAATAGAAATATATTCTATAATTTCTAAATTAATTAATTAATTTTTTATTTTTACTTTTTCTTTTATTTAATTTATCTTTCATTCTTTTCCCTTTTCCCATCTTCTCCATCCTCTCATCAATGGTCATCTTGACTAAGGGAAAAAGTGAGAAAAAAAGGGAAGAGAGGGAAAATAATAATAATAATAATAATAATATATATATATATATATAAATAAAAATGAGGGAGGAATCTTCCACCAGGCTCTATTTTTAATGCCAATTTACTTTATTTATTTATTTAAAAAGGAAAACTTATTTCAAATTTAACATAATTTGGTTTAGATAAAGTCCTTTTAAAATTCTAATCAATTAGGTTTTTGTGTATAATGTTTTGGGGTTTGGAAATTACTTTAAAGACCATTTTTATTAAATTTTTTAACCAATTATATATTTTAGCAATATATTTTTTAATATATATATATATATATATATAAAAGCACCGGAAAGTATAAGAAAATGAAAAGAAAAGATATTTTTTAAATATAAGTCAAGCTTATTGACTCACAACTAGTTCTTTTCTTATGAACATCTTCTACATAAACAGACCACCACCTTTTGATCGAGATGCTACCGTTCCTCCCATCAATCATCGAGTTAGACTAGTAGCAGTCGCCGGTGGATACACACTCTTTCATGATCTCTCTCTTACCCCTCACCCTCACTCTTTCATGTTGAGAGGGGTGTCATCTGTTAGTACTGTACACTGTGTGAAGTTGTTATCTAGGGTTTTAGAATTGAGCTATTTTCTTGTTTTTTTTTTTTCTCGGTAAGAAACCATTGATTCTGAATCAACACTTGAATTGAATACAAATCTATTTAAGTTGAAG

mRNA sequence

AAAAATCGAAACCTTGGATTTGGGGATGATCTTGACAGCAACATGGCGACCCTTGAGGCTTCCCTTCTTCGCCTTAGCTCTGCAAGTGAACCCAAAATGGCCGCGCCCTACTTCTTCCCCAATCTCATAATGCGCCACAAATTGCTTCGAATATCCAAACTCCCTATTCACCTCAACGACCTCGCTGTCGCCGTTGCCTTCTTCAGGAATCGGGGCCTGATTCGGCTTAGCAGAGCCATGGCGTCGTGCGAGAAGTTCCTTGATGTGTTTCGCCGGCGAAGGCGGCGGGAACGGCCTGGACCGGCGTTTGGCACCGCCGGATGGCGAGTTCTTGAACACGCTAGACAGAGGACTCGGAGTGAAGAACGGAAAATTGGAAGGGGAGTTTCTGGTAATCCCAACAAGAATCACTACAAGACGAACATCATGGGAGCAGAAATCAAGGCAAAGAACAAGCAAAGAGGGAAACCAGAACACGTTAATGAGGCCCAGACCACCACCTTTTGATCGAGATGCTACCGTTCCTCCCATCAATCATCGAGTTAGACTAGTAGCAGTCGCCGGTGGATACACACTCTTTCATGATCTCTCTCTTACCCCTCACCCTCACTCTTTCATGTTGAGAGGGGTGTCATCTGTTAGTACTGTACACTGTGTGAAGTTGTTATCTAGGGTTTTAGAATTGAGCTATTTTCTTGTTTTTTTTTTTTCTCGGTAAGAAACCATTGATTCTGAATCAACACTTGAATTGAATACAAATCTATTTAAGTTGAAG

Coding sequence (CDS)

AAAAATCGAAACCTTGGATTTGGGGATGATCTTGACAGCAACATGGCGACCCTTGAGGCTTCCCTTCTTCGCCTTAGCTCTGCAAGTGAACCCAAAATGGCCGCGCCCTACTTCTTCCCCAATCTCATAATGCGCCACAAATTGCTTCGAATATCCAAACTCCCTATTCACCTCAACGACCTCGCTGTCGCCGTTGCCTTCTTCAGGAATCGGGGCCTGATTCGGCTTAGCAGAGCCATGGCGTCGTGCGAGAAGTTCCTTGATGTGTTTCGCCGGCGAAGGCGGCGGGAACGGCCTGGACCGGCGTTTGGCACCGCCGGATGGCGAGTTCTTGAACACGCTAGACAGAGGACTCGGAGTGAAGAACGGAAAATTGGAAGGGGAGTTTCTGGTAATCCCAACAAGAATCACTACAAGACGAACATCATGGGAGCAGAAATCAAGGCAAAGAACAAGCAAAGAGGGAAACCAGAACACGTTAATGAGGCCCAGACCACCACCTTTTGA

Protein sequence

KNRNLGFGDDLDSNMATLEASLLRLSSASEPKMAAPYFFPNLIMRHKLLRISKLPIHLNDLAVAVAFFRNRGLIRLSRAMASCEKFLDVFRRRRRRERPGPAFGTAGWRVLEHARQRTRSEERKIGRGVSGNPNKNHYKTNIMGAEIKAKNKQRGKPEHVNEAQTTTF

Homology

[Close]

BLAST of Cp4.1LG10g11150 vs. NCBI nr
Match: KAG6603302.1 (hypothetical protein SDJN03_03911, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 75.9 bits (185), Expect = 1.82e-14
Identity = 36/40 (90.00%), Postives = 37/40 (92.50%), Query Frame = 0


Query: 127 RGVSGNPNKNHYKTNIMGAEIKAKNKQRGKPEHVNEAQTT 166
           R + GNPNKNHYKTNIMGAEIKAKNKQRGKPEHVNEAQ T
Sbjct: 9   RDLEGNPNKNHYKTNIMGAEIKAKNKQRGKPEHVNEAQRT 48

[Close]

BLAST of Cp4.1LG10g11150 vs. ExPASy TrEMBL
Match: A0A7C9AWR7 (Uncharacterized protein OS=Opuntia streptacantha OX=393608 PE=4 SV=1)

HSP 1 Score: 60.1 bits (144), Expect = 8.80e-08
Identity = 44/115 (38.26%), Postives = 59/115 (51.30%), Query Frame = 0


Query: 5   LGFGDDLDSNMATLEASLLRLSSASEPKMAAPYFFPNLIMRHKLLRISKLPIHLNDLAVA 64
           LGFG++LDSN   LE + L L  A  PKM +P   P LI+  K+L I+K  I L   ++ 
Sbjct: 11  LGFGNNLDSNDLILELTPLTLGRACMPKMPSPNLLPQLILSPKILSITKAFIQLLP-SLP 70

Query: 65  VAFFRNRGLIRLSRAMASCEKFLDVFRRRRRRERP--GPAFGTAGWRVLEHARQR 117
               R    + L R    C++ L+V  RRR R+RP   P +   GWR      QR
Sbjct: 71  PILLRYAPFLGLHRPEPLCQRRLNVLGRRRWRKRPLEEPPWRRPGWRRRHSGGQR 124

[Close]

BLAST of Cp4.1LG10g11150 vs. ExPASy TrEMBL
Match: B9F8K7 (Uncharacterized protein OS=Oryza sativa subsp. japonica OX=39947 GN=OsJ_10963 PE=4 SV=1)

HSP 1 Score: 49.7 bits (117), Expect = 9.74e-04
Identity = 34/95 (35.79%), Postives = 53/95 (55.79%), Query Frame = 0


Query: 5   LGFGDDLDSNMATLEASLLRLSSASEPKMAAPYFFPNLIMRHKLLRISKLPIHLNDLAVA 64
           LG GDDLD ++  LE +LL    A   ++AA      L++  ++   ++  +  +     
Sbjct: 33  LGLGDDLDGDVVALELALLAGGGAGVAEVAAANLAAELVLGGEVPGEAEALVQRH---AG 92

Query: 65  VAFFRNRGLIRLSRAMASCEKFLDVFRRRRRRERP 99
           +A  R+  L+RL RA+A  ++  DV RRRRRRERP
Sbjct: 93  LAGLRDGRLVRLHRAVAPRQERADVLRRRRRRERP 124

The following BLAST results are available for this feature:

BLAST of Cp4.1LG10g11150 vs.


Match Name	E-value	Identity	Description

BLAST of Cp4.1LG10g11150 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6603302.1	1.82e-14	90.00	hypothetical protein SDJN03_03911, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of Cp4.1LG10g11150 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A7C9AWR7	8.80e-08	38.26	Uncharacterized protein OS=Opuntia streptacantha OX=393608 PE=4 SV=1	[more]
B9F8K7	9.74e-04	35.79	Uncharacterized protein OS=Oryza sativa subsp. japonica OX=39947 GN=OsJ_10963 PE...	[more]

BLAST of Cp4.1LG10g11150 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 119..138

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG10g11150.1	Cp4.1LG10g11150.1	mRNA