Cucsat.G1939 (gene) Cucumber (B10) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.GTGTGTGAATTGAATGGAAAGTTAAAGAAATGTGGAAAGGTGAGTGATGGAGAAGAGATTGAGGTTTAGCCAAAACTCCAAAAGGGACCAAAGGTTTTTGCGTTCTTTCCCATAAAGCAAAGCAGGCAAAGGCTGATGATGAGAAGACTGCTCACACTCACACAAACAACAACAACAACAACTTCCTCTTCCACTCTTTTCATTTCAATTTCCAGACAAACCACAGTCACTGTGACCCAAAAATCGAGAGACTGGAAGAAGGAATCAGATGCCATTACTTACATACGTTAGTTTAACTGCCACACTCACAAGGGAATCCAATTTTATCTACTTCTTCTTCCTTTGATTCTCTTAGAAAAGTTTACTTGCCTTCTTCAAACTCCAAAGCTTTCAAGACACTCAGAAATGGCGCCATCCCATTATTGGGGGATGCCTTCTTAGATCTGGGTATCTTCTTATCCTCTTTCTAAACCTGTAATTTTATCTTTCTTTTACATGGGGTTTCTAGTTTAAGTTTTTCTATGCTTTGCAACTGTAACCCCAGCCCATGTTTCTTTGACTTACCCTGATTGTCTACCCTAGAACCCTAGTCACTAGTTCGATTCTTTCAGTCTACTGTTCTTCTTTTCTCTTTCGCTTGTTAGTTCGTTTGTAGCTTTTAACATTTCTCTGAAGGCGTTTGTAATTAGTTTCGGGTTTTGTATGTGATTACCGATTGGAACACGGATGAGGAGGGGGGTTTGTTTCTTTGTTTGAGTGATTGAAGCGTTGGTTACTTACCTTTGAAGGAAATAACTGATGAGGTTCAAATGTTTATTTTTTTTTTTCATTTTGGTGTTGCTTCTAAAGCATCTTAACGAAAACGAATTTGGACTTGTTTTAATGCTCAAGTAACCATTTCGCTGGCTTTAATTATTTTCAAGATTACATCGATTTGATTAGTTGGTTTTTTTTTTTGTGTGAACCAATCGGTGGTGAGAAGGCATCTCTTTCTTTGGCATATTTGTAATTATCATTAACCATTGGTCTTTTCAGATTCTAATCTATTTTCTTTGGTGAAGATAAGTGTGCTGGGGTGACATCTCTCTTGATGTCATGCCCTTTGCTCCATCATTGCTAAATTACTGTTGATTTTCTTGTATATTCTCCAGATACTCCATTTTTTACGTTGTGTTGGGTATAGGTTTGGTCAAGGAAGAATGCCCCTTCTGAAGATCAAATGATCCAAACATCTTTGAAACCCACGAAACCCAATTAAATTGCCAAGTTTTGAGGTTTTCTGTCATTAATCTTGGCAGAAAATATCCATATGTTAGCAAAATCATGAATCTCCATCATAACTCACTTTTATTCAGATTTTGAATTCATTAAGATGCTCTGTTGTTGAACTCTGTCTTCTTTACTTCATTTAGACTTGGTTATTGTTTACAGGTAAATGACATGTTTCAACAACAGAGTGCCCATAATTCAAGCTTTATTCAGAACAACTCATTAGTTTGTGATGGACCCCACAAATGGAAATAATGCTACCAGCAAAAGCCCAAATTTGGCCTCAAAGCAGAGACTGCGATGGACACATGATCTTCACGAACGATTTGTTAATGCAGTCGCACAACTTGGTGGTCCAGATCGTGAGTGAACTCACCTCTAGTAGCTTTGTAGTTTAGCATCTTCGTATATACGTATACTGTGCCTGAGGATGAAAATGTTGATGCCAAATTTAAATTATCGCGTTAGTTCTTTGTTGGCAAGTTGTACAACTTTTCCCTTCCAACTCACATGAGAAAATGAAAGTGTTAGGGTATTCTTGTGCATAATAAAATAAACAAAGATATGAAAAATTGACACCATAAATTGGATGCATCCTGTATATTATATGGGGAGTGGAGGAATAAAACATGATGGACTTAGTAAAAATTGAAGCTAGGGTAGACTATCTTGAACTTGTGTGCCAACAAAGGATGACGTTAGATGATAGAATATTAAATTTACCTTCACTCATCAGTCTAACCTCCTAAATCAATCGACGATTTAAGATGTCTTAAACCATATTTACGGGTGTAAGTTTCATCTTTTCATTAGGTGCTACACCCAAAGGCGTCCTCAGAGTAATGGGTGTTCAAGGTTTAACAATATACCACGTCAAAAGCCACCTACAGGTATGTAATATTTCACATAATTAAGATTGATTTCTTATTCTTACTTAAGATGAGGTTTATGTTAGCATGCATAAAGTTTGTTTTCTAATTTGTCTTCTTGGATTCATCCAGAAATATAGGCTTGCAAAATACCTTCCCGACTCCTCGTCTGATGGTAGGTGAATCGAGTTCCAAATTGTTCCTTTTCCATCTTAATTCGCACAAAATTTTGCAGACAAAACCTCACTAGTGACATCCACCAAGTCATTCACCTGTTTGTTGTATTGTTGATGCAAGGGAAAAAGACCGACAAGAAGGATTCTAGTGACATTCTATCAAACATTGATGGCTCGTCGTAAGTCTAATCCCCATACACTTCTCATTTAGCTCTGCGTTATACTGGAAGTTAATGTAAATATAATGTAGAACGAGGCACCCTTCTTGCTCTTAATTGGCAACTGACTGTTTGATGGCAGTAACCCTAAACTTTTGACCATCTGATCACCAAGGACAAGAAAAATGAAATTTATTATATTTTTGCAGGGGAATGCAAATTACTGAAGCACTTAAGCTGCAGATGGAGGTCCAGAAGCGACTGCATGAACAATTGGAGGTTTGCTCTAGTTATTCTAAAAATTGGAGCACGCACCCTTCACGTTTCAGATATTTTAAAAACTGGAGCACGCACTCAACCTATTACTAAATAGAATGCACGGCGTAACTCGTAATTTGAAGTCTTGGCTAATGAATCACAAGGAATCATGATTCGACTGCTGCGGGGTGGGCTAAATTTTCACAAACATCTGATTGTTTCATCGCATGCAGGTACAGAGACAACTGCAGTTACGGATTGAAGCCCAAGGCAAGTACTTGAAGAAGATAATCGAAGAGCAACAAAAACTTAGTGGGGTTCTTTCAGGAGCTCCAGCTGCCTCTGCCTTTACAGCTCCTGCTTCTGGTGATAACTGCCCAGAAGTTGATAAAAACGACCCCTCGACACCCGCGTCCACATCCGAGTTTCCTCGCCAGGAGAAGGTATCAAAGGAACGTGCCCAAGGCAAGAGTGTCTCTATTGATGATTCTTTCTCGTCTCATCACGAACCATTGACGCCTGATTCTGGTTGCCATAGCTCCCCAAGTGAGAGTCCGAGGCCAGTGAAGAAGCAAATACAGTCAAAGATGATACTTGCACATCAGATACTGGAGTCTAGTTTAAACTCCACTCACAAGGAATGAGCTTCATCTGGAATATCGATAGGGGACGACGGCCAATTAGACTAAACCAAGTTTTTTTAGTCCTAGTGTTCTTTGTTTACAAATTATCTTCCATGGTTAACTCCGAGTATAGTTTTGCTAGTCTTTACATATTTCGGTGTATCATATCACATCTCGGCACATAAATGTTCTCCTGAGTAGGACCAATATTTAGTGAACCATGATGGTTATGTTAATGATCGAGGAAGGACCGATGCTTAATCTTAAAGAATTGTTGGAGTTGAATTCAATATTTGCATGTGATCAATATAATCGACAATCCCCTTTCATTTGGCGATCTATCGTTTGAATCCAATACCAAACCATTAAGGGAAAATCTATGTTAAGCTCCAGCAGATTTAAAATCCATTAAGGTTTC ATGGGTGTTCAAGGTTTAACAATATACCACGTCAAAAGCCACCTACAGAAATATAGGCTTGCAAAATACCTTCCCGACTCCTCGTCTGATGGGAAAAAGACCGACAAGAAGGATTCTAGTGACATTCTATCAAACATTGATGGCTCGTCGGGAATGCAAATTACTGAAGCACTTAAGCTGCAGATGGAGGTCCAGAAGCGACTGCATGAACAATTGGAGGTACAGAGACAACTGCAGTTACGGATTGAAGCCCAAGGCAAGTACTTGAAGAAGATAATCGAAGAGCAACAAAAACTTAGTGGGGTTCTTTCAGGAGCTCCAGCTGCCTCTGCCTTTACAGCTCCTGCTTCTGGTGATAACTGCCCAGAAGTTGATAAAAACGACCCCTCGACACCCGCGTCCACATCCGAGTTTCCTCGCCAGGAGAAGGTATCAAAGGAACGTGCCCAAGGCAAGAGTGTCTCTATTGATGATTCTTTCTCGTCTCATCACGAACCATTGACGCCTGATTCTGGTTGCCATAGCTCCCCAAGTGAGAGTCCGAGGCCAGTGAAGAAGCAAATACAGTCAAAGATGATACTTGCACATCAGATACTGGAGTCTAGTTTAAACTCCACTCACAAGGAATGA MGVQGLTIYHVKSHLQKYRLAKYLPDSSSDGKKTDKKDSSDILSNIDGSSGMQITEALKLQMEVQKRLHEQLEVQRQLQLRIEAQGKYLKKIIEEQQKLSGVLSGAPAASAFTAPASGDNCPEVDKNDPSTPASTSEFPRQEKVSKERAQGKSVSIDDSFSSHHEPLTPDSGCHSSPSESPRPVKKQIQSKMILAHQILESSLNSTHKE Homology
BLAST of Cucsat.G1939 vs. ExPASy Swiss-Prot
Match: Q9SJW0 (Myb family transcription factor PHL7 OS=Arabidopsis thaliana OX=3702 GN=PHL7 PE=2 SV=1) HSP 1 Score: 162.2 bits (409), Expect = 3.2e-39 Identity = 83/103 (80.58%), Postives = 91/103 (88.35%), Query Frame = 0
BLAST of Cucsat.G1939 vs. ExPASy Swiss-Prot
Match: A2X0Q0 (Protein PHOSPHATE STARVATION RESPONSE 3 OS=Oryza sativa subsp. indica OX=39946 GN=PHR3 PE=3 SV=1) HSP 1 Score: 110.2 bits (274), Expect = 1.5e-23 Identity = 52/87 (59.77%), Postives = 69/87 (79.31%), Query Frame = 0
BLAST of Cucsat.G1939 vs. ExPASy Swiss-Prot
Match: Q6YXZ4 (Protein PHOSPHATE STARVATION RESPONSE 3 OS=Oryza sativa subsp. japonica OX=39947 GN=PHR3 PE=2 SV=1) HSP 1 Score: 110.2 bits (274), Expect = 1.5e-23 Identity = 52/87 (59.77%), Postives = 69/87 (79.31%), Query Frame = 0
BLAST of Cucsat.G1939 vs. ExPASy Swiss-Prot
Match: B8ANX9 (Protein PHOSPHATE STARVATION RESPONSE 1 OS=Oryza sativa subsp. indica OX=39946 GN=PHR1 PE=3 SV=1) HSP 1 Score: 105.1 bits (261), Expect = 4.7e-22 Identity = 58/102 (56.86%), Postives = 75/102 (73.53%), Query Frame = 0
BLAST of Cucsat.G1939 vs. ExPASy Swiss-Prot
Match: Q10LZ1 (Protein PHOSPHATE STARVATION RESPONSE 1 OS=Oryza sativa subsp. japonica OX=39947 GN=PHR1 PE=2 SV=1) HSP 1 Score: 105.1 bits (261), Expect = 4.7e-22 Identity = 58/102 (56.86%), Postives = 75/102 (73.53%), Query Frame = 0
BLAST of Cucsat.G1939 vs. NCBI nr
Match: ACA24492.1 (putative myb family transcription factor [Cucumis sativus] >KGN49010.1 hypothetical protein Csa_004184 [Cucumis sativus]) HSP 1 Score: 205 bits (522), Expect = 2.14e-64 Identity = 103/103 (100.00%), Postives = 103/103 (100.00%), Query Frame = 0
BLAST of Cucsat.G1939 vs. NCBI nr
Match: XP_031743095.1 (LOW QUALITY PROTEIN: myb family transcription factor PHL7 [Cucumis sativus]) HSP 1 Score: 205 bits (522), Expect = 4.03e-64 Identity = 103/103 (100.00%), Postives = 103/103 (100.00%), Query Frame = 0
BLAST of Cucsat.G1939 vs. NCBI nr
Match: XP_008440942.1 (PREDICTED: protein PHR1-LIKE 1-like [Cucumis melo] >XP_008440943.1 PREDICTED: protein PHR1-LIKE 1-like [Cucumis melo] >XP_008440944.1 PREDICTED: protein PHR1-LIKE 1-like [Cucumis melo] >XP_016899325.1 PREDICTED: protein PHR1-LIKE 1-like [Cucumis melo]) HSP 1 Score: 204 bits (519), Expect = 7.77e-64 Identity = 102/103 (99.03%), Postives = 103/103 (100.00%), Query Frame = 0
BLAST of Cucsat.G1939 vs. NCBI nr
Match: XP_038881985.1 (myb family transcription factor PHL7 [Benincasa hispida] >XP_038881986.1 myb family transcription factor PHL7 [Benincasa hispida]) HSP 1 Score: 191 bits (486), Expect = 3.72e-58 Identity = 97/103 (94.17%), Postives = 99/103 (96.12%), Query Frame = 0
BLAST of Cucsat.G1939 vs. NCBI nr
Match: XP_022950611.1 (myb family transcription factor PHL7-like [Cucurbita moschata] >XP_022950612.1 myb family transcription factor PHL7-like [Cucurbita moschata] >XP_022950613.1 myb family transcription factor PHL7-like [Cucurbita moschata]) HSP 1 Score: 189 bits (480), Expect = 3.15e-57 Identity = 94/103 (91.26%), Postives = 98/103 (95.15%), Query Frame = 0
BLAST of Cucsat.G1939 vs. ExPASy TrEMBL
Match: B3FNK5 (Putative myb family transcription factor OS=Cucumis sativus OX=3659 GN=Csa_6G510280 PE=2 SV=1) HSP 1 Score: 205 bits (522), Expect = 1.03e-64 Identity = 103/103 (100.00%), Postives = 103/103 (100.00%), Query Frame = 0
BLAST of Cucsat.G1939 vs. ExPASy TrEMBL
Match: A0A1S3B2B2 (protein PHR1-LIKE 1-like OS=Cucumis melo OX=3656 GN=LOC103485207 PE=3 SV=1) HSP 1 Score: 204 bits (519), Expect = 3.76e-64 Identity = 102/103 (99.03%), Postives = 103/103 (100.00%), Query Frame = 0
BLAST of Cucsat.G1939 vs. ExPASy TrEMBL
Match: A0A6J1GFB1 (myb family transcription factor PHL7-like OS=Cucurbita moschata OX=3662 GN=LOC111453658 PE=3 SV=1) HSP 1 Score: 189 bits (480), Expect = 1.53e-57 Identity = 94/103 (91.26%), Postives = 98/103 (95.15%), Query Frame = 0
BLAST of Cucsat.G1939 vs. ExPASy TrEMBL
Match: A0A2P2LCH0 (Transcription factor OS=Rhizophora mucronata OX=61149 PE=3 SV=1) HSP 1 Score: 180 bits (457), Expect = 7.32e-56 Identity = 87/103 (84.47%), Postives = 96/103 (93.20%), Query Frame = 0
BLAST of Cucsat.G1939 vs. ExPASy TrEMBL
Match: A0A6J1BT33 (myb family transcription factor PHL7 OS=Momordica charantia OX=3673 GN=LOC111005303 PE=3 SV=1) HSP 1 Score: 183 bits (464), Expect = 1.69e-55 Identity = 91/103 (88.35%), Postives = 95/103 (92.23%), Query Frame = 0
BLAST of Cucsat.G1939 vs. TAIR 10
Match: AT2G01060.1 (myb-like HTH transcriptional regulator family protein ) HSP 1 Score: 162.2 bits (409), Expect = 2.3e-40 Identity = 83/103 (80.58%), Postives = 91/103 (88.35%), Query Frame = 0
BLAST of Cucsat.G1939 vs. TAIR 10
Match: AT4G28610.1 (phosphate starvation response 1 ) HSP 1 Score: 101.3 bits (251), Expect = 4.8e-22 Identity = 50/94 (53.19%), Postives = 65/94 (69.15%), Query Frame = 0
BLAST of Cucsat.G1939 vs. TAIR 10
Match: AT5G06800.1 (myb-like HTH transcriptional regulator family protein ) HSP 1 Score: 100.5 bits (249), Expect = 8.2e-22 Identity = 50/98 (51.02%), Postives = 68/98 (69.39%), Query Frame = 0
BLAST of Cucsat.G1939 vs. TAIR 10
Match: AT5G06800.2 (myb-like HTH transcriptional regulator family protein ) HSP 1 Score: 100.5 bits (249), Expect = 8.2e-22 Identity = 50/98 (51.02%), Postives = 68/98 (69.39%), Query Frame = 0
BLAST of Cucsat.G1939 vs. TAIR 10
Match: AT3G04450.1 (Homeodomain-like superfamily protein ) HSP 1 Score: 100.1 bits (248), Expect = 1.1e-21 Identity = 47/83 (56.63%), Postives = 61/83 (73.49%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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