Cucsat.G1939.T12 (mRNA) Cucumber (B10) v3

Overview


Name	Cucsat.G1939.T12
Type	mRNA
Organism	Cucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description	HTH myb-type domain-containing protein
Location	ctg1002: 4460472 .. 4464187 (-)
RNA-Seq Expression	Cucsat.G1939.T12
Synteny	Cucsat.G1939.T12

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

TGGATGTAATTTAAAATTTATGAGTGTGTGAATTGAATGGAAAGTTAAAGAAATGTGGAAAGGTGAGTGATGGAGAAGAGATTGAGGTTTAGCCAAAACTCCAAAAGGGACCAAAGGTTTTTGCGTTCTTTCCCATAAAGCAAAGCAGGCAAAGGCTGATGATGAGAAGACTGCTCACACTCACACAAACAACAACAACAACAACTTCCTCTTCCACTCTTTTCATTTCAATTTCCAGACAAACCACAGTCACTGTGACCCAAAAATCGAGAGACTGGAAGAAGGAATCAGATGCCATTACTTACATACGTTAGTTTAACTGCCACACTCACAAGGGAATCCAATTTTATCTACTTCTTCTTCCTTTGATTCTCTTAGAAAAGTTTACTTGCCTTCTTCAAACTCCAAAGCTTTCAAGACACTCAGAAATGGCGCCATCCCATTATTGGGGGATGCCTTCTTAGATCTGGGTATCTTCTTATCCTCTTTCTAAACCTGTAATTTTATCTTTCTTTTACATGGGGTTTCTAGTTTAAGTTTTTCTATGCTTTGCAACTGTAACCCCAGCCCATGTTTCTTTGACTTACCCTGATTGTCTACCCTAGAACCCTAGTCACTAGTTCGATTCTTTCAGTCTACTGTTCTTCTTTTCTCTTTCGCTTGTTAGTTCGTTTGTAGCTTTTAACATTTCTCTGAAGGCGTTTGTAATTAGTTTCGGGTTTTGTATGTGATTACCGATTGGAACACGGATGAGGAGGGGGGTTTGTTTCTTTGTTTGAGTGATTGAAGCGTTGGTTACTTACCTTTGAAGGAAATAACTGATGAGGTTCAAATGTTTATTTTTTTTTTTCATTTTGGTGTTGCTTCTAAAGCATCTTAACGAAAACGAATTTGGACTTGTTTTAATGCTCAAGTAACCATTTCGCTGGCTTTAATTATTTTCAAGATTACATCGATTTGATTAGTTGGTTTTTTTTTTTGTGTGAACCAATCGGTGGTGAGAAGGCATCTCTTTCTTTGGCATATTTGTAATTATCATTAACCATTGGTCTTTTCAGATTCTAATCTATTTTCTTTGGTGAAGATAAGTGTGCTGGGGTGACATCTCTCTTGATGTCATGCCCTTTGCTCCATCATTGCTAAATTACTGTTGATTTTCTTGTATATTCTCCAGATACTCCATTTTTTACGTTGTGTTGGGTATAGGTTTGGTCAAGGAAGAATGCCCCTTCTGAAGATCAAATGATCCAAACATCTTTGAAACCCACGAAACCCAATTAAATTGCCAAGTTTTGAGGTTTTCTGTCATTAATCTTGGCAGAAAATATCCATATGTTAGCAAAATCATGAATCTCCATCATAACTCACTTTTATTCAGATTTTGAATTCATTAAGATGCTCTGTTGTTGAACTCTGTCTTCTTTACTTCATTTAGACTTGGTTATTGTTTACAGGTAAATGACATGTTTCAACAACAGAGTGCCCATAATTCAAGCTTTATTCAGAACAACTCATTAGTTTGTGATGGACCCCACAAATGGAAATAATGCTACCAGCAAAAGCCCAAATTTGGCCTCAAAGCAGAGACTGCGATGGACACATGATCTTCACGAACGATTTGTTAATGCAGTCGCACAACTTGGTGGTCCAGATCGTGAGTGAACTCACCTCTAGTAGCTTTGTAGTTTAGCATCTTCGTATATACGTATACTGTGCCTGAGGATGAAAATGTTGATGCCAAATTTAAATTATCGCGTTAGTTCTTTGTTGGCAAGTTGTACAACTTTTCCCTTCCAACTCACATGAGAAAATGAAAGTGTTAGGGTATTCTTGTGCATAATAAAATAAACAAAGATATGAAAAATTGACACCATAAATTGGATGCATCCTGTATATTATATGGGGAGTGGAGGAATAAAACATGATGGACTTAGTAAAAATTGAAGCTAGGGTAGACTATCTTGAACTTGTGTGCCAACAAAGGATGACGTTAGATGATAGAATATTAAATTTACCTTCACTCATCAGTCTAACCTCCTAAATCAATCGACGATTTAAGATGTCTTAAACCATATTTACGGGTGTAAGTTTCATCTTTTCATTAGGTGCTACACCCAAAGGCGTCCTCAGAGTAATGGGTGTTCAAGGTTTAACAATATACCACGTCAAAAGCCACCTACAGGTATGTAATATTTCACATAATTAAGATTGATTTCTTATTCTTACTTAAGATGAGGTTTATGTTAGCATGCATAAAGTTTGTTTTCTAATTTGTCTTCTTGGATTCATCCAGAAATATAGGCTTGCAAAATACCTTCCCGACTCCTCGTCTGATGGTAGGTGAATCGAGTTCCAAATTGTTCCTTTTCCATCTTAATTCGCACAAAATTTTGCAGACAAAACCTCACTAGTGACATCCACCAAGTCATTCACCTGTTTGTTGTATTGTTGATGCAAGGGAAAAAGACCGACAAGAAGGATTCTAGTGACATTCTATCAAACATTGATGGCTCGTCGTAAGTCTAATCCCCATACACTTCTCATTTAGCTCTGCGTTATACTGGAAGTTAATGTAAATATAATGTAGAACGAGGCACCCTTCTTGCTCTTAATTGGCAACTGACTGTTTGATGGCAGTAACCCTAAACTTTTGACCATCTGATCACCAAGGACAAGAAAAATGAAATTTATTATATTTTTGCAGGGGAATGCAAATTACTGAAGCACTTAAGCTGCAGATGGAGGTCCAGAAGCGACTGCATGAACAATTGGAGGTTTGCTCTAGTTATTCTAAAAATTGGAGCACGCACCCTTCACGTTTCAGATATTTTAAAAACTGGAGCACGCACTCAACCTATTACTAAATAGAATGCACGGCGTAACTCGTAATTTGAAGTCTTGGCTAATGAATCACAAGGAATCATGATTCGACTGCTGCGGGGTGGGCTAAATTTTCACAAACATCTGATTGTTTCATCGCATGCAGGTACAGAGACAACTGCAGTTACGGATTGAAGCCCAAGGCAAGTACTTGAAGAAGATAATCGAAGAGCAACAAAAACTTAGTGGGGTTCTTTCAGGAGCTCCAGCTGCCTCTGCCTTTACAGCTCCTGCTTCTGGTGATAACTGCCCAGAAGTTGATAAAAACGACCCCTCGACACCCGCGTCCACATCCGAGTTTCCTCGCCAGGAGAAGGTATCAAAGGAACGTGCCCAAGGCAAGAGTGTCTCTATTGATGATTCTTTCTCGTCTCATCACGAACCATTGACGCCTGATTCTGGTTGCCATAGCTCCCCAAGTGAGAGTCCGAGGCCAGTGAAGAAGCAAATACAGTCAAAGATGATACTTGCACATCAGATACTGGAGTCTAGTTTAAACTCCACTCACAAGGAATGAGCTTCATCTGGAATATCGATAGGGGACGACGGCCAATTAGACTAAACCAAGTTTTTTTAGTCCTAGTGTTCTTTGTTTACAAATTATCTTCCATGGTTAACTCCGAGTATAGTTTTGCTAGTCTTTACATATTTCGGTGTATCATATCACATCTCGGCACATAAATGTTCTCCTGAGTAGGACCAATATTTAGTGAACCATGATGGTTATGTTAATGATCGAGGAAGGACCGATGCTTAATCTTAAAGAATTGTTGGAGTTGAATTCAATATTTGCATGTGATCAATATAATCGACAATCCCCTTTCATTTGGCGATCT

Coding sequence (CDS)

ATGCAGGTACAGAGACAACTGCAGTTACGGATTGAAGCCCAAGGCAAGTACTTGAAGAAGATAATCGAAGAGCAACAAAAACTTAGTGGGGTTCTTTCAGGAGCTCCAGCTGCCTCTGCCTTTACAGCTCCTGCTTCTGGTGATAACTGCCCAGAAGTTGATAAAAACGACCCCTCGACACCCGCGTCCACATCCGAGTTTCCTCGCCAGGAGAAGGTATCAAAGGAACGTGCCCAAGGCAAGAGTGTCTCTATTGATGATTCTTTCTCGTCTCATCACGAACCATTGACGCCTGATTCTGGTTGCCATAGCTCCCCAAGTGAGAGTCCGAGGCCAGTGAAGAAGCAAATACAGTCAAAGATGATACTTGCACATCAGATACTGGAGTCTAGTTTAAACTCCACTCACAAGGAATGA

Protein sequence

MQVQRQLQLRIEAQGKYLKKIIEEQQKLSGVLSGAPAASAFTAPASGDNCPEVDKNDPSTPASTSEFPRQEKVSKERAQGKSVSIDDSFSSHHEPLTPDSGCHSSPSESPRPVKKQIQSKMILAHQILESSLNSTHKE

Homology

[Close]

BLAST of Cucsat.G1939.T12 vs. ExPASy Swiss-Prot
Match: Q9SJW0 (Myb family transcription factor PHL7 OS=Arabidopsis thaliana OX=3702 GN=PHL7 PE=2 SV=1)

HSP 1 Score: 112.1 bits (279), Expect = 5.1e-24
Identity = 77/150 (51.33%), Postives = 99/150 (66.00%), Query Frame = 0


Query: 1   MQVQRQLQLRIEAQGKYLKKIIEEQQKLSGVLSGAPAASAFTAPASGDNCPEVDKNDPST 60
           ++VQRQLQLRIEAQGKYLKKIIEEQQ+LSGVL G P     +AP +GD       +DP+T
Sbjct: 121 LEVQRQLQLRIEAQGKYLKKIIEEQQRLSGVL-GEP-----SAPVTGD-------SDPAT 180

Query: 61  PASTSEFPRQEKVSKERAQGKSVSIDDSFSSHHEPLTPDSGCH-SSPSES---------P 120
           PA TSE P Q+K  K+    KS+S+D+S SS+ EPLTPDSGC+  SP ES         P
Sbjct: 181 PAPTSESPLQDKSGKDCGPDKSLSVDESLSSYREPLTPDSGCNIGSPDESTGEERLSKKP 240

Query: 121 RPVK--KQIQSKMILAHQILESSLNSTHKE 139
           R V+        +++ H ILES LN+++ +
Sbjct: 241 RLVRGAAGYTPDIVVGHPILESGLNTSYHQ 257

[Close]

BLAST of Cucsat.G1939.T12 vs. NCBI nr
Match: ACA24492.1 (putative myb family transcription factor [Cucumis sativus] >KGN49010.1 hypothetical protein Csa_004184 [Cucumis sativus])

HSP 1 Score: 257 bits (657), Expect = 2.84e-84
Identity = 136/138 (98.55%), Postives = 138/138 (100.00%), Query Frame = 0


Query: 1   MQVQRQLQLRIEAQGKYLKKIIEEQQKLSGVLSGAPAASAFTAPASGDNCPEVDKNDPST 60
           ++VQRQLQLRIEAQGKYLKKIIEEQQKLSGVLSGAPAASAFTAPASGDNCPEVDKNDPST
Sbjct: 125 LEVQRQLQLRIEAQGKYLKKIIEEQQKLSGVLSGAPAASAFTAPASGDNCPEVDKNDPST 184

Query: 61  PASTSEFPRQEKVSKERAQGKSVSIDDSFSSHHEPLTPDSGCHSSPSESPRPVKKQIQSK 120
           PASTSEFPRQEKVSKERAQGKSVSIDDSFSSHHEPLTPDSGCHSSPSESPRPVKKQIQSK
Sbjct: 185 PASTSEFPRQEKVSKERAQGKSVSIDDSFSSHHEPLTPDSGCHSSPSESPRPVKKQIQSK 244

Query: 121 MILAHQILESSLNSTHKE 138
           MILAHQILESSLNSTHKE
Sbjct: 245 MILAHQILESSLNSTHKE 262

[Close]

BLAST of Cucsat.G1939.T12 vs. NCBI nr
Match: XP_031743095.1 (LOW QUALITY PROTEIN: myb family transcription factor PHL7 [Cucumis sativus])

HSP 1 Score: 257 bits (657), Expect = 5.61e-84
Identity = 136/138 (98.55%), Postives = 138/138 (100.00%), Query Frame = 0


Query: 1   MQVQRQLQLRIEAQGKYLKKIIEEQQKLSGVLSGAPAASAFTAPASGDNCPEVDKNDPST 60
           ++VQRQLQLRIEAQGKYLKKIIEEQQKLSGVLSGAPAASAFTAPASGDNCPEVDKNDPST
Sbjct: 146 LEVQRQLQLRIEAQGKYLKKIIEEQQKLSGVLSGAPAASAFTAPASGDNCPEVDKNDPST 205

Query: 61  PASTSEFPRQEKVSKERAQGKSVSIDDSFSSHHEPLTPDSGCHSSPSESPRPVKKQIQSK 120
           PASTSEFPRQEKVSKERAQGKSVSIDDSFSSHHEPLTPDSGCHSSPSESPRPVKKQIQSK
Sbjct: 206 PASTSEFPRQEKVSKERAQGKSVSIDDSFSSHHEPLTPDSGCHSSPSESPRPVKKQIQSK 265

Query: 121 MILAHQILESSLNSTHKE 138
           MILAHQILESSLNSTHKE
Sbjct: 266 MILAHQILESSLNSTHKE 283

[Close]

BLAST of Cucsat.G1939.T12 vs. NCBI nr
Match: XP_008440942.1 (PREDICTED: protein PHR1-LIKE 1-like [Cucumis melo] >XP_008440943.1 PREDICTED: protein PHR1-LIKE 1-like [Cucumis melo] >XP_008440944.1 PREDICTED: protein PHR1-LIKE 1-like [Cucumis melo] >XP_016899325.1 PREDICTED: protein PHR1-LIKE 1-like [Cucumis melo])

HSP 1 Score: 239 bits (610), Expect = 5.08e-77
Identity = 131/146 (89.73%), Postives = 134/146 (91.78%), Query Frame = 0


Query: 1   MQVQRQLQLRIEAQGKYLKKIIEEQQKLSGVLSGAPAASAFTAPASGDNCPEVDKNDPST 60
           ++VQRQLQLRIEAQGKYLKKIIEEQQKLSGVLSGAPAASAFTAPASGDNCPE DKNDP T
Sbjct: 125 LEVQRQLQLRIEAQGKYLKKIIEEQQKLSGVLSGAPAASAFTAPASGDNCPEADKNDPPT 184

Query: 61  PASTSEFPRQEKVSKERAQGKSVSIDDSFSSHHEPLTPDSGCHSSPSESPRPVKKQIQ-- 120
           PASTSEFPRQEKVSKERAQGKSVSIDDSFSSHHEPLTPDSGCHSSPSES RPVKKQ Q  
Sbjct: 185 PASTSEFPRQEKVSKERAQGKSVSIDDSFSSHHEPLTPDSGCHSSPSESARPVKKQRQDM 244

Query: 121 ------SKMILAHQILESSLNSTHKE 138
                 S+MILAHQILESSLNSTHKE
Sbjct: 245 DGAFAKSEMILAHQILESSLNSTHKE 270

[Close]

BLAST of Cucsat.G1939.T12 vs. NCBI nr
Match: KAA0025597.1 (protein PHR1-LIKE 1-like [Cucumis melo var. makuwa] >TYK12472.1 protein PHR1-LIKE 1-like [Cucumis melo var. makuwa])

HSP 1 Score: 223 bits (569), Expect = 1.57e-71
Identity = 121/135 (89.63%), Postives = 123/135 (91.11%), Query Frame = 0


Query: 12  EAQGKYLKKIIEEQQKLSGVLSGAPAASAFTAPASGDNCPEVDKNDPSTPASTSEFPRQE 71
           +AQGKYLKKIIEEQQKLSGVLSGAPAASAFTAPASGDNCPE DKNDP TPASTSEFPRQE
Sbjct: 83  DAQGKYLKKIIEEQQKLSGVLSGAPAASAFTAPASGDNCPEADKNDPPTPASTSEFPRQE 142

Query: 72  KVSKERAQGKSVSIDDSFSSHHEPLTPDSGCHSSPSESPRPVKKQIQ--------SKMIL 131
           KVSKERAQGKSVSIDDSFSSHHEPLTPDSGCHSSPSES RPVKKQ Q        S+MIL
Sbjct: 143 KVSKERAQGKSVSIDDSFSSHHEPLTPDSGCHSSPSESARPVKKQRQDMDGAFAKSEMIL 202

Query: 132 AHQILESSLNSTHKE 138
           AHQILESSLNSTHKE
Sbjct: 203 AHQILESSLNSTHKE 217

[Close]

BLAST of Cucsat.G1939.T12 vs. NCBI nr
Match: XP_038881985.1 (myb family transcription factor PHL7 [Benincasa hispida] >XP_038881986.1 myb family transcription factor PHL7 [Benincasa hispida])

HSP 1 Score: 225 bits (573), Expect = 1.12e-70
Identity = 122/146 (83.56%), Postives = 127/146 (86.99%), Query Frame = 0


Query: 1   MQVQRQLQLRIEAQGKYLKKIIEEQQKLSGVLSGAPAASAFTAPASGDNCPEVDKNDPST 60
           ++VQRQLQLRIEAQGKYLKKIIEEQQKLSGVLSGAP ASAFTAPASGD CPE DKNDP T
Sbjct: 154 LEVQRQLQLRIEAQGKYLKKIIEEQQKLSGVLSGAPVASAFTAPASGDKCPETDKNDPPT 213

Query: 61  PASTSEFPRQEKVSKERAQGKSVSIDDSFSSHHEPLTPDSGCHSSPSESPRPVKKQIQ-- 120
           PA TSE PRQEK SKER Q KSVS+DDS SSHHEPLTPDSGCHSSP+ESPRPVKKQ Q  
Sbjct: 214 PAPTSEIPRQEKTSKERVQAKSVSVDDSLSSHHEPLTPDSGCHSSPNESPRPVKKQRQYR 273

Query: 121 ------SKMILAHQILESSLNSTHKE 138
                 S+MILAHQILESSLNSTHKE
Sbjct: 274 DGAFSKSEMILAHQILESSLNSTHKE 299

[Close]

BLAST of Cucsat.G1939.T12 vs. ExPASy TrEMBL
Match: B3FNK5 (Putative myb family transcription factor OS=Cucumis sativus OX=3659 GN=Csa_6G510280 PE=2 SV=1)

HSP 1 Score: 257 bits (657), Expect = 1.37e-84
Identity = 136/138 (98.55%), Postives = 138/138 (100.00%), Query Frame = 0


Query: 1   MQVQRQLQLRIEAQGKYLKKIIEEQQKLSGVLSGAPAASAFTAPASGDNCPEVDKNDPST 60
           ++VQRQLQLRIEAQGKYLKKIIEEQQKLSGVLSGAPAASAFTAPASGDNCPEVDKNDPST
Sbjct: 125 LEVQRQLQLRIEAQGKYLKKIIEEQQKLSGVLSGAPAASAFTAPASGDNCPEVDKNDPST 184

Query: 61  PASTSEFPRQEKVSKERAQGKSVSIDDSFSSHHEPLTPDSGCHSSPSESPRPVKKQIQSK 120
           PASTSEFPRQEKVSKERAQGKSVSIDDSFSSHHEPLTPDSGCHSSPSESPRPVKKQIQSK
Sbjct: 185 PASTSEFPRQEKVSKERAQGKSVSIDDSFSSHHEPLTPDSGCHSSPSESPRPVKKQIQSK 244

Query: 121 MILAHQILESSLNSTHKE 138
           MILAHQILESSLNSTHKE
Sbjct: 245 MILAHQILESSLNSTHKE 262

[Close]

BLAST of Cucsat.G1939.T12 vs. ExPASy TrEMBL
Match: A0A1S3B2B2 (protein PHR1-LIKE 1-like OS=Cucumis melo OX=3656 GN=LOC103485207 PE=3 SV=1)

HSP 1 Score: 239 bits (610), Expect = 2.46e-77
Identity = 131/146 (89.73%), Postives = 134/146 (91.78%), Query Frame = 0


Query: 1   MQVQRQLQLRIEAQGKYLKKIIEEQQKLSGVLSGAPAASAFTAPASGDNCPEVDKNDPST 60
           ++VQRQLQLRIEAQGKYLKKIIEEQQKLSGVLSGAPAASAFTAPASGDNCPE DKNDP T
Sbjct: 125 LEVQRQLQLRIEAQGKYLKKIIEEQQKLSGVLSGAPAASAFTAPASGDNCPEADKNDPPT 184

Query: 61  PASTSEFPRQEKVSKERAQGKSVSIDDSFSSHHEPLTPDSGCHSSPSESPRPVKKQIQ-- 120
           PASTSEFPRQEKVSKERAQGKSVSIDDSFSSHHEPLTPDSGCHSSPSES RPVKKQ Q  
Sbjct: 185 PASTSEFPRQEKVSKERAQGKSVSIDDSFSSHHEPLTPDSGCHSSPSESARPVKKQRQDM 244

Query: 121 ------SKMILAHQILESSLNSTHKE 138
                 S+MILAHQILESSLNSTHKE
Sbjct: 245 DGAFAKSEMILAHQILESSLNSTHKE 270

[Close]

BLAST of Cucsat.G1939.T12 vs. ExPASy TrEMBL
Match: A0A5A7SLM5 (Protein PHR1-LIKE 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G00490 PE=4 SV=1)

HSP 1 Score: 223 bits (569), Expect = 7.61e-72
Identity = 121/135 (89.63%), Postives = 123/135 (91.11%), Query Frame = 0


Query: 12  EAQGKYLKKIIEEQQKLSGVLSGAPAASAFTAPASGDNCPEVDKNDPSTPASTSEFPRQE 71
           +AQGKYLKKIIEEQQKLSGVLSGAPAASAFTAPASGDNCPE DKNDP TPASTSEFPRQE
Sbjct: 83  DAQGKYLKKIIEEQQKLSGVLSGAPAASAFTAPASGDNCPEADKNDPPTPASTSEFPRQE 142

Query: 72  KVSKERAQGKSVSIDDSFSSHHEPLTPDSGCHSSPSESPRPVKKQIQ--------SKMIL 131
           KVSKERAQGKSVSIDDSFSSHHEPLTPDSGCHSSPSES RPVKKQ Q        S+MIL
Sbjct: 143 KVSKERAQGKSVSIDDSFSSHHEPLTPDSGCHSSPSESARPVKKQRQDMDGAFAKSEMIL 202

Query: 132 AHQILESSLNSTHKE 138
           AHQILESSLNSTHKE
Sbjct: 203 AHQILESSLNSTHKE 217

[Close]

BLAST of Cucsat.G1939.T12 vs. ExPASy TrEMBL
Match: A0A6J1BT33 (myb family transcription factor PHL7 OS=Momordica charantia OX=3673 GN=LOC111005303 PE=3 SV=1)

HSP 1 Score: 219 bits (557), Expect = 6.01e-69
Identity = 119/146 (81.51%), Postives = 127/146 (86.99%), Query Frame = 0


Query: 1   MQVQRQLQLRIEAQGKYLKKIIEEQQKLSGVLSGAPAASAFTAPASGDNCPEVDKNDPST 60
           ++VQRQLQLRIEAQGKYLKKIIEEQQKLSGVLSGAP  S+F+APASGDNCPE DKNDP T
Sbjct: 125 LEVQRQLQLRIEAQGKYLKKIIEEQQKLSGVLSGAPVPSSFSAPASGDNCPETDKNDPPT 184

Query: 61  PASTSEFPRQEKVSKERAQGKSVSIDDSFSSHHEPLTPDSGCHSSPSESPRPVKKQIQ-- 120
           PA TSE PRQEK SKERAQ KS+S+DDS SSHHEPLTPDSGCHSSPSESPRPVKK  Q  
Sbjct: 185 PAPTSESPRQEKASKERAQAKSISVDDSSSSHHEPLTPDSGCHSSPSESPRPVKKPRQCR 244

Query: 121 ------SKMILAHQILESSLNSTHKE 138
                 S+MILAHQILESSLNST+KE
Sbjct: 245 DGAFSKSEMILAHQILESSLNSTYKE 270

[Close]

BLAST of Cucsat.G1939.T12 vs. ExPASy TrEMBL
Match: A0A6J1GFB1 (myb family transcription factor PHL7-like OS=Cucurbita moschata OX=3662 GN=LOC111453658 PE=3 SV=1)

HSP 1 Score: 219 bits (557), Expect = 1.51e-68
Identity = 121/146 (82.88%), Postives = 129/146 (88.36%), Query Frame = 0


Query: 1   MQVQRQLQLRIEAQGKYLKKIIEEQQKLSGVLSGA-PAASAFTAPASGDNCPEVDKNDPS 60
           ++VQRQLQLRIEAQGKYLKKIIEEQQKL+GVLSGA P AS+F+APASG+NCPE DKNDP 
Sbjct: 155 LEVQRQLQLRIEAQGKYLKKIIEEQQKLTGVLSGAAPVASSFSAPASGENCPETDKNDPP 214

Query: 61  TPASTSEFPRQEKVSKERAQGKSVSIDDSFSSHHEPLTPDSGCHSSPSESPRPVKKQIQ- 120
           TPA TSEFPRQEK SKERAQ KSVSIDDSFSS HEPLTPDSGCHSSP+ESPRPVKKQ Q 
Sbjct: 215 TPAPTSEFPRQEKASKERAQAKSVSIDDSFSSRHEPLTPDSGCHSSPNESPRPVKKQRQY 274

Query: 121 -------SKMILAHQILESSLNSTHK 137
                  S+MILAHQILESSLNSTHK
Sbjct: 275 QDGAFAKSEMILAHQILESSLNSTHK 300

[Close]

BLAST of Cucsat.G1939.T12 vs. TAIR 10
Match: AT2G01060.2 (myb-like HTH transcriptional regulator family protein )

HSP 1 Score: 112.1 bits (279), Expect = 3.6e-25
Identity = 77/150 (51.33%), Postives = 99/150 (66.00%), Query Frame = 0


Query: 1   MQVQRQLQLRIEAQGKYLKKIIEEQQKLSGVLSGAPAASAFTAPASGDNCPEVDKNDPST 60
           ++VQRQLQLRIEAQGKYLKKIIEEQQ+LSGVL G P     +AP +GD       +DP+T
Sbjct: 72  LEVQRQLQLRIEAQGKYLKKIIEEQQRLSGVL-GEP-----SAPVTGD-------SDPAT 131

Query: 61  PASTSEFPRQEKVSKERAQGKSVSIDDSFSSHHEPLTPDSGCH-SSPSES---------P 120
           PA TSE P Q+K  K+    KS+S+D+S SS+ EPLTPDSGC+  SP ES         P
Sbjct: 132 PAPTSESPLQDKSGKDCGPDKSLSVDESLSSYREPLTPDSGCNIGSPDESTGEERLSKKP 191

Query: 121 RPVK--KQIQSKMILAHQILESSLNSTHKE 139
           R V+        +++ H ILES LN+++ +
Sbjct: 192 RLVRGAAGYTPDIVVGHPILESGLNTSYHQ 208

[Close]

BLAST of Cucsat.G1939.T12 vs. TAIR 10
Match: AT2G01060.1 (myb-like HTH transcriptional regulator family protein )

HSP 1 Score: 112.1 bits (279), Expect = 3.6e-25
Identity = 77/150 (51.33%), Postives = 99/150 (66.00%), Query Frame = 0


Query: 1   MQVQRQLQLRIEAQGKYLKKIIEEQQKLSGVLSGAPAASAFTAPASGDNCPEVDKNDPST 60
           ++VQRQLQLRIEAQGKYLKKIIEEQQ+LSGVL G P     +AP +GD       +DP+T
Sbjct: 121 LEVQRQLQLRIEAQGKYLKKIIEEQQRLSGVL-GEP-----SAPVTGD-------SDPAT 180

Query: 61  PASTSEFPRQEKVSKERAQGKSVSIDDSFSSHHEPLTPDSGCH-SSPSES---------P 120
           PA TSE P Q+K  K+    KS+S+D+S SS+ EPLTPDSGC+  SP ES         P
Sbjct: 181 PAPTSESPLQDKSGKDCGPDKSLSVDESLSSYREPLTPDSGCNIGSPDESTGEERLSKKP 240

Query: 121 RPVK--KQIQSKMILAHQILESSLNSTHKE 139
           R V+        +++ H ILES LN+++ +
Sbjct: 241 RLVRGAAGYTPDIVVGHPILESGLNTSYHQ 257

The following BLAST results are available for this feature:

BLAST of Cucsat.G1939.T12 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SJW0	5.1e-24	51.33	Myb family transcription factor PHL7 OS=Arabidopsis thaliana OX=3702 GN=PHL7 PE=...	[more]

BLAST of Cucsat.G1939.T12 vs. NCBI nr


Match Name	E-value	Identity	Description
ACA24492.1	2.84e-84	98.55	putative myb family transcription factor [Cucumis sativus] >KGN49010.1 hypotheti...	[more]
XP_031743095.1	5.61e-84	98.55	LOW QUALITY PROTEIN: myb family transcription factor PHL7 [Cucumis sativus]	[more]
XP_008440942.1	5.08e-77	89.73	PREDICTED: protein PHR1-LIKE 1-like [Cucumis melo] >XP_008440943.1 PREDICTED: pr...	[more]
KAA0025597.1	1.57e-71	89.63	protein PHR1-LIKE 1-like [Cucumis melo var. makuwa] >TYK12472.1 protein PHR1-LIK...	[more]
XP_038881985.1	1.12e-70	83.56	myb family transcription factor PHL7 [Benincasa hispida] >XP_038881986.1 myb fam...	[more]

BLAST of Cucsat.G1939.T12 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
B3FNK5	1.37e-84	98.55	Putative myb family transcription factor OS=Cucumis sativus OX=3659 GN=Csa_6G510...	[more]
A0A1S3B2B2	2.46e-77	89.73	protein PHR1-LIKE 1-like OS=Cucumis melo OX=3656 GN=LOC103485207 PE=3 SV=1	[more]
A0A5A7SLM5	7.61e-72	89.63	Protein PHR1-LIKE 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol...	[more]
A0A6J1BT33	6.01e-69	81.51	myb family transcription factor PHL7 OS=Momordica charantia OX=3673 GN=LOC111005...	[more]
A0A6J1GFB1	1.51e-68	82.88	myb family transcription factor PHL7-like OS=Cucurbita moschata OX=3662 GN=LOC11...	[more]

BLAST of Cucsat.G1939.T12 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G01060.2	3.6e-25	51.33	myb-like HTH transcriptional regulator family protein	[more]
AT2G01060.1	3.6e-25	51.33	myb-like HTH transcriptional regulator family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR025756	MYB-CC type transcription factor, LHEQLE-containing domain	PFAM	PF14379	Myb_CC_LHEQLE	coord: 2..27 e-value: 9.3E-9 score: 34.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 83..114
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 42..120
None	No IPR available	PANTHER	PTHR31314:SF112	MYB FAMILY TRANSCRIPTION FACTOR PHL7	coord: 2..137
IPR044848	PHR1-like	PANTHER	PTHR31314	MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE	coord: 2..137

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cucsat.G1939	Cucsat.G1939	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsat.G1939.T12.E1	Cucsat.G1939.T12.E1	exon
Cucsat.G1939.T12.E2	Cucsat.G1939.T12.E2	exon
Cucsat.G1939.T12.E3	Cucsat.G1939.T12.E3	exon
Cucsat.G1939.T12.E4	Cucsat.G1939.T12.E4	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsat.G1939.T12.C1	Cucsat.G1939.T12.C1	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cucsat.G1939.T12	Cucsat.G1939.T12-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003700	DNA-binding transcription factor activity
molecular_function	GO:0003677	DNA binding