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Cucsat.G1939.T12 (mRNA) Cucumber (B10) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.TGGATGTAATTTAAAATTTATGAGTGTGTGAATTGAATGGAAAGTTAAAGAAATGTGGAAAGGTGAGTGATGGAGAAGAGATTGAGGTTTAGCCAAAACTCCAAAAGGGACCAAAGGTTTTTGCGTTCTTTCCCATAAAGCAAAGCAGGCAAAGGCTGATGATGAGAAGACTGCTCACACTCACACAAACAACAACAACAACAACTTCCTCTTCCACTCTTTTCATTTCAATTTCCAGACAAACCACAGTCACTGTGACCCAAAAATCGAGAGACTGGAAGAAGGAATCAGATGCCATTACTTACATACGTTAGTTTAACTGCCACACTCACAAGGGAATCCAATTTTATCTACTTCTTCTTCCTTTGATTCTCTTAGAAAAGTTTACTTGCCTTCTTCAAACTCCAAAGCTTTCAAGACACTCAGAAATGGCGCCATCCCATTATTGGGGGATGCCTTCTTAGATCTGGGTATCTTCTTATCCTCTTTCTAAACCTGTAATTTTATCTTTCTTTTACATGGGGTTTCTAGTTTAAGTTTTTCTATGCTTTGCAACTGTAACCCCAGCCCATGTTTCTTTGACTTACCCTGATTGTCTACCCTAGAACCCTAGTCACTAGTTCGATTCTTTCAGTCTACTGTTCTTCTTTTCTCTTTCGCTTGTTAGTTCGTTTGTAGCTTTTAACATTTCTCTGAAGGCGTTTGTAATTAGTTTCGGGTTTTGTATGTGATTACCGATTGGAACACGGATGAGGAGGGGGGTTTGTTTCTTTGTTTGAGTGATTGAAGCGTTGGTTACTTACCTTTGAAGGAAATAACTGATGAGGTTCAAATGTTTATTTTTTTTTTTCATTTTGGTGTTGCTTCTAAAGCATCTTAACGAAAACGAATTTGGACTTGTTTTAATGCTCAAGTAACCATTTCGCTGGCTTTAATTATTTTCAAGATTACATCGATTTGATTAGTTGGTTTTTTTTTTTGTGTGAACCAATCGGTGGTGAGAAGGCATCTCTTTCTTTGGCATATTTGTAATTATCATTAACCATTGGTCTTTTCAGATTCTAATCTATTTTCTTTGGTGAAGATAAGTGTGCTGGGGTGACATCTCTCTTGATGTCATGCCCTTTGCTCCATCATTGCTAAATTACTGTTGATTTTCTTGTATATTCTCCAGATACTCCATTTTTTACGTTGTGTTGGGTATAGGTTTGGTCAAGGAAGAATGCCCCTTCTGAAGATCAAATGATCCAAACATCTTTGAAACCCACGAAACCCAATTAAATTGCCAAGTTTTGAGGTTTTCTGTCATTAATCTTGGCAGAAAATATCCATATGTTAGCAAAATCATGAATCTCCATCATAACTCACTTTTATTCAGATTTTGAATTCATTAAGATGCTCTGTTGTTGAACTCTGTCTTCTTTACTTCATTTAGACTTGGTTATTGTTTACAGGTAAATGACATGTTTCAACAACAGAGTGCCCATAATTCAAGCTTTATTCAGAACAACTCATTAGTTTGTGATGGACCCCACAAATGGAAATAATGCTACCAGCAAAAGCCCAAATTTGGCCTCAAAGCAGAGACTGCGATGGACACATGATCTTCACGAACGATTTGTTAATGCAGTCGCACAACTTGGTGGTCCAGATCGTGAGTGAACTCACCTCTAGTAGCTTTGTAGTTTAGCATCTTCGTATATACGTATACTGTGCCTGAGGATGAAAATGTTGATGCCAAATTTAAATTATCGCGTTAGTTCTTTGTTGGCAAGTTGTACAACTTTTCCCTTCCAACTCACATGAGAAAATGAAAGTGTTAGGGTATTCTTGTGCATAATAAAATAAACAAAGATATGAAAAATTGACACCATAAATTGGATGCATCCTGTATATTATATGGGGAGTGGAGGAATAAAACATGATGGACTTAGTAAAAATTGAAGCTAGGGTAGACTATCTTGAACTTGTGTGCCAACAAAGGATGACGTTAGATGATAGAATATTAAATTTACCTTCACTCATCAGTCTAACCTCCTAAATCAATCGACGATTTAAGATGTCTTAAACCATATTTACGGGTGTAAGTTTCATCTTTTCATTAGGTGCTACACCCAAAGGCGTCCTCAGAGTAATGGGTGTTCAAGGTTTAACAATATACCACGTCAAAAGCCACCTACAGGTATGTAATATTTCACATAATTAAGATTGATTTCTTATTCTTACTTAAGATGAGGTTTATGTTAGCATGCATAAAGTTTGTTTTCTAATTTGTCTTCTTGGATTCATCCAGAAATATAGGCTTGCAAAATACCTTCCCGACTCCTCGTCTGATGGTAGGTGAATCGAGTTCCAAATTGTTCCTTTTCCATCTTAATTCGCACAAAATTTTGCAGACAAAACCTCACTAGTGACATCCACCAAGTCATTCACCTGTTTGTTGTATTGTTGATGCAAGGGAAAAAGACCGACAAGAAGGATTCTAGTGACATTCTATCAAACATTGATGGCTCGTCGTAAGTCTAATCCCCATACACTTCTCATTTAGCTCTGCGTTATACTGGAAGTTAATGTAAATATAATGTAGAACGAGGCACCCTTCTTGCTCTTAATTGGCAACTGACTGTTTGATGGCAGTAACCCTAAACTTTTGACCATCTGATCACCAAGGACAAGAAAAATGAAATTTATTATATTTTTGCAGGGGAATGCAAATTACTGAAGCACTTAAGCTGCAGATGGAGGTCCAGAAGCGACTGCATGAACAATTGGAGGTTTGCTCTAGTTATTCTAAAAATTGGAGCACGCACCCTTCACGTTTCAGATATTTTAAAAACTGGAGCACGCACTCAACCTATTACTAAATAGAATGCACGGCGTAACTCGTAATTTGAAGTCTTGGCTAATGAATCACAAGGAATCATGATTCGACTGCTGCGGGGTGGGCTAAATTTTCACAAACATCTGATTGTTTCATCGCATGCAGGTACAGAGACAACTGCAGTTACGGATTGAAGCCCAAGGCAAGTACTTGAAGAAGATAATCGAAGAGCAACAAAAACTTAGTGGGGTTCTTTCAGGAGCTCCAGCTGCCTCTGCCTTTACAGCTCCTGCTTCTGGTGATAACTGCCCAGAAGTTGATAAAAACGACCCCTCGACACCCGCGTCCACATCCGAGTTTCCTCGCCAGGAGAAGGTATCAAAGGAACGTGCCCAAGGCAAGAGTGTCTCTATTGATGATTCTTTCTCGTCTCATCACGAACCATTGACGCCTGATTCTGGTTGCCATAGCTCCCCAAGTGAGAGTCCGAGGCCAGTGAAGAAGCAAATACAGTCAAAGATGATACTTGCACATCAGATACTGGAGTCTAGTTTAAACTCCACTCACAAGGAATGAGCTTCATCTGGAATATCGATAGGGGACGACGGCCAATTAGACTAAACCAAGTTTTTTTAGTCCTAGTGTTCTTTGTTTACAAATTATCTTCCATGGTTAACTCCGAGTATAGTTTTGCTAGTCTTTACATATTTCGGTGTATCATATCACATCTCGGCACATAAATGTTCTCCTGAGTAGGACCAATATTTAGTGAACCATGATGGTTATGTTAATGATCGAGGAAGGACCGATGCTTAATCTTAAAGAATTGTTGGAGTTGAATTCAATATTTGCATGTGATCAATATAATCGACAATCCCCTTTCATTTGGCGATCT ATGCAGGTACAGAGACAACTGCAGTTACGGATTGAAGCCCAAGGCAAGTACTTGAAGAAGATAATCGAAGAGCAACAAAAACTTAGTGGGGTTCTTTCAGGAGCTCCAGCTGCCTCTGCCTTTACAGCTCCTGCTTCTGGTGATAACTGCCCAGAAGTTGATAAAAACGACCCCTCGACACCCGCGTCCACATCCGAGTTTCCTCGCCAGGAGAAGGTATCAAAGGAACGTGCCCAAGGCAAGAGTGTCTCTATTGATGATTCTTTCTCGTCTCATCACGAACCATTGACGCCTGATTCTGGTTGCCATAGCTCCCCAAGTGAGAGTCCGAGGCCAGTGAAGAAGCAAATACAGTCAAAGATGATACTTGCACATCAGATACTGGAGTCTAGTTTAAACTCCACTCACAAGGAATGA MQVQRQLQLRIEAQGKYLKKIIEEQQKLSGVLSGAPAASAFTAPASGDNCPEVDKNDPSTPASTSEFPRQEKVSKERAQGKSVSIDDSFSSHHEPLTPDSGCHSSPSESPRPVKKQIQSKMILAHQILESSLNSTHKE Homology
BLAST of Cucsat.G1939.T12 vs. ExPASy Swiss-Prot
Match: Q9SJW0 (Myb family transcription factor PHL7 OS=Arabidopsis thaliana OX=3702 GN=PHL7 PE=2 SV=1) HSP 1 Score: 112.1 bits (279), Expect = 5.1e-24 Identity = 77/150 (51.33%), Postives = 99/150 (66.00%), Query Frame = 0
BLAST of Cucsat.G1939.T12 vs. NCBI nr
Match: ACA24492.1 (putative myb family transcription factor [Cucumis sativus] >KGN49010.1 hypothetical protein Csa_004184 [Cucumis sativus]) HSP 1 Score: 257 bits (657), Expect = 2.84e-84 Identity = 136/138 (98.55%), Postives = 138/138 (100.00%), Query Frame = 0
BLAST of Cucsat.G1939.T12 vs. NCBI nr
Match: XP_031743095.1 (LOW QUALITY PROTEIN: myb family transcription factor PHL7 [Cucumis sativus]) HSP 1 Score: 257 bits (657), Expect = 5.61e-84 Identity = 136/138 (98.55%), Postives = 138/138 (100.00%), Query Frame = 0
BLAST of Cucsat.G1939.T12 vs. NCBI nr
Match: XP_008440942.1 (PREDICTED: protein PHR1-LIKE 1-like [Cucumis melo] >XP_008440943.1 PREDICTED: protein PHR1-LIKE 1-like [Cucumis melo] >XP_008440944.1 PREDICTED: protein PHR1-LIKE 1-like [Cucumis melo] >XP_016899325.1 PREDICTED: protein PHR1-LIKE 1-like [Cucumis melo]) HSP 1 Score: 239 bits (610), Expect = 5.08e-77 Identity = 131/146 (89.73%), Postives = 134/146 (91.78%), Query Frame = 0
BLAST of Cucsat.G1939.T12 vs. NCBI nr
Match: KAA0025597.1 (protein PHR1-LIKE 1-like [Cucumis melo var. makuwa] >TYK12472.1 protein PHR1-LIKE 1-like [Cucumis melo var. makuwa]) HSP 1 Score: 223 bits (569), Expect = 1.57e-71 Identity = 121/135 (89.63%), Postives = 123/135 (91.11%), Query Frame = 0
BLAST of Cucsat.G1939.T12 vs. NCBI nr
Match: XP_038881985.1 (myb family transcription factor PHL7 [Benincasa hispida] >XP_038881986.1 myb family transcription factor PHL7 [Benincasa hispida]) HSP 1 Score: 225 bits (573), Expect = 1.12e-70 Identity = 122/146 (83.56%), Postives = 127/146 (86.99%), Query Frame = 0
BLAST of Cucsat.G1939.T12 vs. ExPASy TrEMBL
Match: B3FNK5 (Putative myb family transcription factor OS=Cucumis sativus OX=3659 GN=Csa_6G510280 PE=2 SV=1) HSP 1 Score: 257 bits (657), Expect = 1.37e-84 Identity = 136/138 (98.55%), Postives = 138/138 (100.00%), Query Frame = 0
BLAST of Cucsat.G1939.T12 vs. ExPASy TrEMBL
Match: A0A1S3B2B2 (protein PHR1-LIKE 1-like OS=Cucumis melo OX=3656 GN=LOC103485207 PE=3 SV=1) HSP 1 Score: 239 bits (610), Expect = 2.46e-77 Identity = 131/146 (89.73%), Postives = 134/146 (91.78%), Query Frame = 0
BLAST of Cucsat.G1939.T12 vs. ExPASy TrEMBL
Match: A0A5A7SLM5 (Protein PHR1-LIKE 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G00490 PE=4 SV=1) HSP 1 Score: 223 bits (569), Expect = 7.61e-72 Identity = 121/135 (89.63%), Postives = 123/135 (91.11%), Query Frame = 0
BLAST of Cucsat.G1939.T12 vs. ExPASy TrEMBL
Match: A0A6J1BT33 (myb family transcription factor PHL7 OS=Momordica charantia OX=3673 GN=LOC111005303 PE=3 SV=1) HSP 1 Score: 219 bits (557), Expect = 6.01e-69 Identity = 119/146 (81.51%), Postives = 127/146 (86.99%), Query Frame = 0
BLAST of Cucsat.G1939.T12 vs. ExPASy TrEMBL
Match: A0A6J1GFB1 (myb family transcription factor PHL7-like OS=Cucurbita moschata OX=3662 GN=LOC111453658 PE=3 SV=1) HSP 1 Score: 219 bits (557), Expect = 1.51e-68 Identity = 121/146 (82.88%), Postives = 129/146 (88.36%), Query Frame = 0
BLAST of Cucsat.G1939.T12 vs. TAIR 10
Match: AT2G01060.2 (myb-like HTH transcriptional regulator family protein ) HSP 1 Score: 112.1 bits (279), Expect = 3.6e-25 Identity = 77/150 (51.33%), Postives = 99/150 (66.00%), Query Frame = 0
BLAST of Cucsat.G1939.T12 vs. TAIR 10
Match: AT2G01060.1 (myb-like HTH transcriptional regulator family protein ) HSP 1 Score: 112.1 bits (279), Expect = 3.6e-25 Identity = 77/150 (51.33%), Postives = 99/150 (66.00%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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