Cucsat.G1939 (gene) Cucumber (B10) v3

Overview
NameCucsat.G1939
Typegene
OrganismCucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
DescriptionHTH myb-type domain-containing protein
Locationctg1002: 4461032 .. 4463752 (-)
RNA-Seq ExpressionCucsat.G1939
SyntenyCucsat.G1939
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
GTGTGTGAATTGAATGGAAAGTTAAAGAAATGTGGAAAGGTGAGTGATGGAGAAGAGATTGAGGTTTAGCCAAAACTCCAAAAGGGACCAAAGGTTTTTGCGTTCTTTCCCATAAAGCAAAGCAGGCAAAGGCTGATGATGAGAAGACTGCTCACACTCACACAAACAACAACAACAACAACTTCCTCTTCCACTCTTTTCATTTCAATTTCCAGACAAACCACAGTCACTGTGACCCAAAAATCGAGAGACTGGAAGAAGGAATCAGATGCCATTACTTACATACGTTAGTTTAACTGCCACACTCACAAGGGAATCCAATTTTATCTACTTCTTCTTCCTTTGATTCTCTTAGAAAAGTTTACTTGCCTTCTTCAAACTCCAAAGCTTTCAAGACACTCAGAAATGGCGCCATCCCATTATTGGGGGATGCCTTCTTAGATCTGGGTATCTTCTTATCCTCTTTCTAAACCTGTAATTTTATCTTTCTTTTACATGGGGTTTCTAGTTTAAGTTTTTCTATGCTTTGCAACTGTAACCCCAGCCCATGTTTCTTTGACTTACCCTGATTGTCTACCCTAGAACCCTAGTCACTAGTTCGATTCTTTCAGTCTACTGTTCTTCTTTTCTCTTTCGCTTGTTAGTTCGTTTGTAGCTTTTAACATTTCTCTGAAGGCGTTTGTAATTAGTTTCGGGTTTTGTATGTGATTACCGATTGGAACACGGATGAGGAGGGGGGTTTGTTTCTTTGTTTGAGTGATTGAAGCGTTGGTTACTTACCTTTGAAGGAAATAACTGATGAGGTTCAAATGTTTATTTTTTTTTTTCATTTTGGTGTTGCTTCTAAAGCATCTTAACGAAAACGAATTTGGACTTGTTTTAATGCTCAAGTAACCATTTCGCTGGCTTTAATTATTTTCAAGATTACATCGATTTGATTAGTTGGTTTTTTTTTTTGTGTGAACCAATCGGTGGTGAGAAGGCATCTCTTTCTTTGGCATATTTGTAATTATCATTAACCATTGGTCTTTTCAGATTCTAATCTATTTTCTTTGGTGAAGATAAGTGTGCTGGGGTGACATCTCTCTTGATGTCATGCCCTTTGCTCCATCATTGCTAAATTACTGTTGATTTTCTTGTATATTCTCCAGATACTCCATTTTTTACGTTGTGTTGGGTATAGGTTTGGTCAAGGAAGAATGCCCCTTCTGAAGATCAAATGATCCAAACATCTTTGAAACCCACGAAACCCAATTAAATTGCCAAGTTTTGAGGTTTTCTGTCATTAATCTTGGCAGAAAATATCCATATGTTAGCAAAATCATGAATCTCCATCATAACTCACTTTTATTCAGATTTTGAATTCATTAAGATGCTCTGTTGTTGAACTCTGTCTTCTTTACTTCATTTAGACTTGGTTATTGTTTACAGGTAAATGACATGTTTCAACAACAGAGTGCCCATAATTCAAGCTTTATTCAGAACAACTCATTAGTTTGTGATGGACCCCACAAATGGAAATAATGCTACCAGCAAAAGCCCAAATTTGGCCTCAAAGCAGAGACTGCGATGGACACATGATCTTCACGAACGATTTGTTAATGCAGTCGCACAACTTGGTGGTCCAGATCGTGAGTGAACTCACCTCTAGTAGCTTTGTAGTTTAGCATCTTCGTATATACGTATACTGTGCCTGAGGATGAAAATGTTGATGCCAAATTTAAATTATCGCGTTAGTTCTTTGTTGGCAAGTTGTACAACTTTTCCCTTCCAACTCACATGAGAAAATGAAAGTGTTAGGGTATTCTTGTGCATAATAAAATAAACAAAGATATGAAAAATTGACACCATAAATTGGATGCATCCTGTATATTATATGGGGAGTGGAGGAATAAAACATGATGGACTTAGTAAAAATTGAAGCTAGGGTAGACTATCTTGAACTTGTGTGCCAACAAAGGATGACGTTAGATGATAGAATATTAAATTTACCTTCACTCATCAGTCTAACCTCCTAAATCAATCGACGATTTAAGATGTCTTAAACCATATTTACGGGTGTAAGTTTCATCTTTTCATTAGGTGCTACACCCAAAGGCGTCCTCAGAGTAATGGGTGTTCAAGGTTTAACAATATACCACGTCAAAAGCCACCTACAGGTATGTAATATTTCACATAATTAAGATTGATTTCTTATTCTTACTTAAGATGAGGTTTATGTTAGCATGCATAAAGTTTGTTTTCTAATTTGTCTTCTTGGATTCATCCAGAAATATAGGCTTGCAAAATACCTTCCCGACTCCTCGTCTGATGGTAGGTGAATCGAGTTCCAAATTGTTCCTTTTCCATCTTAATTCGCACAAAATTTTGCAGACAAAACCTCACTAGTGACATCCACCAAGTCATTCACCTGTTTGTTGTATTGTTGATGCAAGGGAAAAAGACCGACAAGAAGGATTCTAGTGACATTCTATCAAACATTGATGGCTCGTCGTAAGTCTAATCCCCATACACTTCTCATTTAGCTCTGCGTTATACTGGAAGTTAATGTAAATATAATGTAGAACGAGGCACCCTTCTTGCTCTTAATTGGCAACTGACTGTTTGATGGCAGTAACCCTAAACTTTTGACCATCTGATCACCAAGGACAAGAAAAATGAAATTTATTATATTTTTGCAGGGGAATGCAAATTACTGAAGCACTTAAGCTGCAGATGGAGGTCCAGAAGCGACTGCATGAACAATTGGAGGTTTGCTCTAGTTATTCTAAAAATTGGAGCACGCACCCTTCACGTTTCAGATATTTTAAAAACTGGAGCACGCACTCAACCTATTACTAAATAGAATGCACGGCGTAACTCGTAATTTGAAGTCTTGGCTAATGAATCACAAGGAATCATGATTCGACTGCTGCGGGGTGGGCTAAATTTTCACAAACATCTGATTGTTTCATCGCATGCAGGTACAGAGACAACTGCAGTTACGGATTGAAGCCCAAGGCAAGTACTTGAAGAAGATAATCGAAGAGCAACAAAAACTTAGTGGGGTTCTTTCAGGAGCTCCAGCTGCCTCTGCCTTTACAGCTCCTGCTTCTGGTGATAACTGCCCAGAAGTTGATAAAAACGACCCCTCGACACCCGCGTCCACATCCGAGTTTCCTCGCCAGGAGAAGGTATCAAAGGAACGTGCCCAAGGCAAGAGTGTCTCTATTGATGATTCTTTCTCGTCTCATCACGAACCATTGACGCCTGATTCTGGTTGCCATAGCTCCCCAAGTGAGAGTCCGAGGCCAGTGAAGAAGCAAATACAGTCAAAGATGATACTTGCACATCAGATACTGGAGTCTAGTTTAAACTCCACTCACAAGGAATGAGCTTCATCTGGAATATCGATAGGGGACGACGGCCAATTAGACTAAACCAAGTTTTTTTAGTCCTAGTGTTCTTTGTTTACAAATTATCTTCCATGGTTAACTCCGAGTATAGTTTTGCTAGTCTTTACATATTTCGGTGTATCATATCACATCTCGGCACATAAATGTTCTCCTGAGTAGGACCAATATTTAGTGAACCATGATGGTTATGTTAATGATCGAGGAAGGACCGATGCTTAATCTTAAAGAATTGTTGGAGTTGAATTCAATATTTGCATGTGATCAATATAATCGACAATCCCCTTTCATTTGGCGATCTATCGTTTGAATCCAATACCAAACCATTAAGGGAAAATCTATGTTAAGCTCCAGCAGATTTAAAATCCATTAAGGTTTC

Coding sequence (CDS)

ATGGGTGTTCAAGGTTTAACAATATACCACGTCAAAAGCCACCTACAGAAATATAGGCTTGCAAAATACCTTCCCGACTCCTCGTCTGATGGGAAAAAGACCGACAAGAAGGATTCTAGTGACATTCTATCAAACATTGATGGCTCGTCGGGAATGCAAATTACTGAAGCACTTAAGCTGCAGATGGAGGTCCAGAAGCGACTGCATGAACAATTGGAGGTACAGAGACAACTGCAGTTACGGATTGAAGCCCAAGGCAAGTACTTGAAGAAGATAATCGAAGAGCAACAAAAACTTAGTGGGGTTCTTTCAGGAGCTCCAGCTGCCTCTGCCTTTACAGCTCCTGCTTCTGGTGATAACTGCCCAGAAGTTGATAAAAACGACCCCTCGACACCCGCGTCCACATCCGAGTTTCCTCGCCAGGAGAAGGTATCAAAGGAACGTGCCCAAGGCAAGAGTGTCTCTATTGATGATTCTTTCTCGTCTCATCACGAACCATTGACGCCTGATTCTGGTTGCCATAGCTCCCCAAGTGAGAGTCCGAGGCCAGTGAAGAAGCAAATACAGTCAAAGATGATACTTGCACATCAGATACTGGAGTCTAGTTTAAACTCCACTCACAAGGAATGA

Protein sequence

MGVQGLTIYHVKSHLQKYRLAKYLPDSSSDGKKTDKKDSSDILSNIDGSSGMQITEALKLQMEVQKRLHEQLEVQRQLQLRIEAQGKYLKKIIEEQQKLSGVLSGAPAASAFTAPASGDNCPEVDKNDPSTPASTSEFPRQEKVSKERAQGKSVSIDDSFSSHHEPLTPDSGCHSSPSESPRPVKKQIQSKMILAHQILESSLNSTHKE
Homology
[Close]
BLAST of Cucsat.G1939 vs. ExPASy Swiss-Prot
Match: Q9SJW0 (Myb family transcription factor PHL7 OS=Arabidopsis thaliana OX=3702 GN=PHL7 PE=2 SV=1)

HSP 1 Score: 162.2 bits (409), Expect = 3.2e-39
Identity = 83/103 (80.58%), Postives = 91/103 (88.35%), Query Frame = 0 

Query: 1   MDPTNGNNATSKSPNLASKQRLRWTHDLHERFVNAVAQLGGPDRATPKGVLRVMGVQGLT 60
           M+  NG   +S     ASKQRLRWTH+LHERFV+AVAQLGGPDRATPKGVLRVMGVQGLT
Sbjct: 1   MEADNGGPNSSH----ASKQRLRWTHELHERFVDAVAQLGGPDRATPKGVLRVMGVQGLT 60

Query: 61  IYHVKSHLQKYRLAKYLPDSSSDGKKTDKKDSSDILSNIDGSS 104
           IYHVKSHLQKYRLAKYLPDSSS+GKKTDKK+S D+LS +DGSS
Sbjct: 61  IYHVKSHLQKYRLAKYLPDSSSEGKKTDKKESGDMLSGLDGSS 99

[Close]
BLAST of Cucsat.G1939 vs. ExPASy Swiss-Prot
Match: A2X0Q0 (Protein PHOSPHATE STARVATION RESPONSE 3 OS=Oryza sativa subsp. indica OX=39946 GN=PHR3 PE=3 SV=1)

HSP 1 Score: 110.2 bits (274), Expect = 1.5e-23
Identity = 52/87 (59.77%), Postives = 69/87 (79.31%), Query Frame = 0 

Query: 7   NNATSKSPNLASKQRLRWTHDLHERFVNAVAQLGGPDRATPKGVLRVMGVQGLTIYHVKS 66
           ++ +S      +K RLRWT +LHERFV+AV +L GP++ATPKGVL++M V+GLTIYH+KS
Sbjct: 253 SSRSSSGTASCNKPRLRWTPELHERFVDAVNKLEGPEKATPKGVLKLMKVEGLTIYHIKS 312

Query: 67  HLQKYRLAKYLPDSSSDGKKTDKKDSS 94
           HLQKYRLAKYLP++  D K+ +KK  S
Sbjct: 313 HLQKYRLAKYLPETKEDKKQEEKKTKS 339

[Close]
BLAST of Cucsat.G1939 vs. ExPASy Swiss-Prot
Match: Q6YXZ4 (Protein PHOSPHATE STARVATION RESPONSE 3 OS=Oryza sativa subsp. japonica OX=39947 GN=PHR3 PE=2 SV=1)

HSP 1 Score: 110.2 bits (274), Expect = 1.5e-23
Identity = 52/87 (59.77%), Postives = 69/87 (79.31%), Query Frame = 0 

Query: 7   NNATSKSPNLASKQRLRWTHDLHERFVNAVAQLGGPDRATPKGVLRVMGVQGLTIYHVKS 66
           ++ +S      +K RLRWT +LHERFV+AV +L GP++ATPKGVL++M V+GLTIYH+KS
Sbjct: 253 SSRSSSGTASCNKPRLRWTPELHERFVDAVNKLEGPEKATPKGVLKLMKVEGLTIYHIKS 312

Query: 67  HLQKYRLAKYLPDSSSDGKKTDKKDSS 94
           HLQKYRLAKYLP++  D K+ +KK  S
Sbjct: 313 HLQKYRLAKYLPETKEDKKQEEKKTKS 339

[Close]
BLAST of Cucsat.G1939 vs. ExPASy Swiss-Prot
Match: B8ANX9 (Protein PHOSPHATE STARVATION RESPONSE 1 OS=Oryza sativa subsp. indica OX=39946 GN=PHR1 PE=3 SV=1)

HSP 1 Score: 105.1 bits (261), Expect = 4.7e-22
Identity = 58/102 (56.86%), Postives = 75/102 (73.53%), Query Frame = 0 

Query: 3   PTNGNNATSKSPNLASKQRLRWTHDLHERFVNAVAQLGGPDRATPKGVLRVMGVQGLTIY 62
           P N +NA+      ASKQR+RWT +LHE FV+AV +LGG ++ATPKGVL++M V GLTIY
Sbjct: 206 PPNNSNAS------ASKQRMRWTPELHESFVHAVNKLGGSEKATPKGVLKLMKVDGLTIY 265

Query: 63  HVKSHLQKYRLAKYLPDSS----SDGKKTDKKDSSDILSNID 101
           HVKSHLQKYR A+Y PD S     +GK TD+  S D+ +++D
Sbjct: 266 HVKSHLQKYRTARYKPDLSEGKTQEGKTTDEL-SLDLKASMD 300

[Close]
BLAST of Cucsat.G1939 vs. ExPASy Swiss-Prot
Match: Q10LZ1 (Protein PHOSPHATE STARVATION RESPONSE 1 OS=Oryza sativa subsp. japonica OX=39947 GN=PHR1 PE=2 SV=1)

HSP 1 Score: 105.1 bits (261), Expect = 4.7e-22
Identity = 58/102 (56.86%), Postives = 75/102 (73.53%), Query Frame = 0 

Query: 3   PTNGNNATSKSPNLASKQRLRWTHDLHERFVNAVAQLGGPDRATPKGVLRVMGVQGLTIY 62
           P N +NA+      ASKQR+RWT +LHE FV+AV +LGG ++ATPKGVL++M V GLTIY
Sbjct: 206 PPNNSNAS------ASKQRMRWTPELHESFVHAVNKLGGSEKATPKGVLKLMKVDGLTIY 265

Query: 63  HVKSHLQKYRLAKYLPDSS----SDGKKTDKKDSSDILSNID 101
           HVKSHLQKYR A+Y PD S     +GK TD+  S D+ +++D
Sbjct: 266 HVKSHLQKYRTARYKPDLSEGKTQEGKTTDEL-SLDLKASMD 300

[Close]
BLAST of Cucsat.G1939 vs. NCBI nr
Match: ACA24492.1 (putative myb family transcription factor [Cucumis sativus] >KGN49010.1 hypothetical protein Csa_004184 [Cucumis sativus])

HSP 1 Score: 205 bits (522), Expect = 2.14e-64
Identity = 103/103 (100.00%), Postives = 103/103 (100.00%), Query Frame = 0 

Query: 1   MDPTNGNNATSKSPNLASKQRLRWTHDLHERFVNAVAQLGGPDRATPKGVLRVMGVQGLT 60
           MDPTNGNNATSKSPNLASKQRLRWTHDLHERFVNAVAQLGGPDRATPKGVLRVMGVQGLT
Sbjct: 1   MDPTNGNNATSKSPNLASKQRLRWTHDLHERFVNAVAQLGGPDRATPKGVLRVMGVQGLT 60

Query: 61  IYHVKSHLQKYRLAKYLPDSSSDGKKTDKKDSSDILSNIDGSS 103
           IYHVKSHLQKYRLAKYLPDSSSDGKKTDKKDSSDILSNIDGSS
Sbjct: 61  IYHVKSHLQKYRLAKYLPDSSSDGKKTDKKDSSDILSNIDGSS 103

[Close]
BLAST of Cucsat.G1939 vs. NCBI nr
Match: XP_031743095.1 (LOW QUALITY PROTEIN: myb family transcription factor PHL7 [Cucumis sativus])

HSP 1 Score: 205 bits (522), Expect = 4.03e-64
Identity = 103/103 (100.00%), Postives = 103/103 (100.00%), Query Frame = 0 

Query: 1   MDPTNGNNATSKSPNLASKQRLRWTHDLHERFVNAVAQLGGPDRATPKGVLRVMGVQGLT 60
           MDPTNGNNATSKSPNLASKQRLRWTHDLHERFVNAVAQLGGPDRATPKGVLRVMGVQGLT
Sbjct: 22  MDPTNGNNATSKSPNLASKQRLRWTHDLHERFVNAVAQLGGPDRATPKGVLRVMGVQGLT 81

Query: 61  IYHVKSHLQKYRLAKYLPDSSSDGKKTDKKDSSDILSNIDGSS 103
           IYHVKSHLQKYRLAKYLPDSSSDGKKTDKKDSSDILSNIDGSS
Sbjct: 82  IYHVKSHLQKYRLAKYLPDSSSDGKKTDKKDSSDILSNIDGSS 124

[Close]
BLAST of Cucsat.G1939 vs. NCBI nr
Match: XP_008440942.1 (PREDICTED: protein PHR1-LIKE 1-like [Cucumis melo] >XP_008440943.1 PREDICTED: protein PHR1-LIKE 1-like [Cucumis melo] >XP_008440944.1 PREDICTED: protein PHR1-LIKE 1-like [Cucumis melo] >XP_016899325.1 PREDICTED: protein PHR1-LIKE 1-like [Cucumis melo])

HSP 1 Score: 204 bits (519), Expect = 7.77e-64
Identity = 102/103 (99.03%), Postives = 103/103 (100.00%), Query Frame = 0 

Query: 1   MDPTNGNNATSKSPNLASKQRLRWTHDLHERFVNAVAQLGGPDRATPKGVLRVMGVQGLT 60
           MDPTNGNNATSK+PNLASKQRLRWTHDLHERFVNAVAQLGGPDRATPKGVLRVMGVQGLT
Sbjct: 1   MDPTNGNNATSKNPNLASKQRLRWTHDLHERFVNAVAQLGGPDRATPKGVLRVMGVQGLT 60

Query: 61  IYHVKSHLQKYRLAKYLPDSSSDGKKTDKKDSSDILSNIDGSS 103
           IYHVKSHLQKYRLAKYLPDSSSDGKKTDKKDSSDILSNIDGSS
Sbjct: 61  IYHVKSHLQKYRLAKYLPDSSSDGKKTDKKDSSDILSNIDGSS 103

[Close]
BLAST of Cucsat.G1939 vs. NCBI nr
Match: XP_038881985.1 (myb family transcription factor PHL7 [Benincasa hispida] >XP_038881986.1 myb family transcription factor PHL7 [Benincasa hispida])

HSP 1 Score: 191 bits (486), Expect = 3.72e-58
Identity = 97/103 (94.17%), Postives = 99/103 (96.12%), Query Frame = 0 

Query: 1   MDPTNGNNATSKSPNLASKQRLRWTHDLHERFVNAVAQLGGPDRATPKGVLRVMGVQGLT 60
           MDPTNGNN TS +PNLASKQRLRWTHDLHERFVNAVAQLGGPDRATPKGVLRVMGVQGLT
Sbjct: 31  MDPTNGNN-TSNNPNLASKQRLRWTHDLHERFVNAVAQLGGPDRATPKGVLRVMGVQGLT 90

Query: 61  IYHVKSHLQKYRLAKYLPDSSSDGKKTDKKDSSDILSNIDGSS 103
           IYHVKSHLQKYRLAKYLPDSSSDGKK DKKDS DIL+NIDGSS
Sbjct: 91  IYHVKSHLQKYRLAKYLPDSSSDGKKADKKDSGDILANIDGSS 132

[Close]
BLAST of Cucsat.G1939 vs. NCBI nr
Match: XP_022950611.1 (myb family transcription factor PHL7-like [Cucurbita moschata] >XP_022950612.1 myb family transcription factor PHL7-like [Cucurbita moschata] >XP_022950613.1 myb family transcription factor PHL7-like [Cucurbita moschata])

HSP 1 Score: 189 bits (480), Expect = 3.15e-57
Identity = 94/103 (91.26%), Postives = 98/103 (95.15%), Query Frame = 0 

Query: 1   MDPTNGNNATSKSPNLASKQRLRWTHDLHERFVNAVAQLGGPDRATPKGVLRVMGVQGLT 60
           M+PTNG+N  SK PNLASKQRLRWTHDLHERFVNAVAQLGGPDRATPKGVLRVMGVQGLT
Sbjct: 31  MEPTNGSNDPSKPPNLASKQRLRWTHDLHERFVNAVAQLGGPDRATPKGVLRVMGVQGLT 90

Query: 61  IYHVKSHLQKYRLAKYLPDSSSDGKKTDKKDSSDILSNIDGSS 103
           IYHVKSHLQKYRLAKYLPDSSSDGKK DKKDS D+LSNI+GSS
Sbjct: 91  IYHVKSHLQKYRLAKYLPDSSSDGKKADKKDSIDVLSNIEGSS 133

[Close]
BLAST of Cucsat.G1939 vs. ExPASy TrEMBL
Match: B3FNK5 (Putative myb family transcription factor OS=Cucumis sativus OX=3659 GN=Csa_6G510280 PE=2 SV=1)

HSP 1 Score: 205 bits (522), Expect = 1.03e-64
Identity = 103/103 (100.00%), Postives = 103/103 (100.00%), Query Frame = 0 

Query: 1   MDPTNGNNATSKSPNLASKQRLRWTHDLHERFVNAVAQLGGPDRATPKGVLRVMGVQGLT 60
           MDPTNGNNATSKSPNLASKQRLRWTHDLHERFVNAVAQLGGPDRATPKGVLRVMGVQGLT
Sbjct: 1   MDPTNGNNATSKSPNLASKQRLRWTHDLHERFVNAVAQLGGPDRATPKGVLRVMGVQGLT 60

Query: 61  IYHVKSHLQKYRLAKYLPDSSSDGKKTDKKDSSDILSNIDGSS 103
           IYHVKSHLQKYRLAKYLPDSSSDGKKTDKKDSSDILSNIDGSS
Sbjct: 61  IYHVKSHLQKYRLAKYLPDSSSDGKKTDKKDSSDILSNIDGSS 103

[Close]
BLAST of Cucsat.G1939 vs. ExPASy TrEMBL
Match: A0A1S3B2B2 (protein PHR1-LIKE 1-like OS=Cucumis melo OX=3656 GN=LOC103485207 PE=3 SV=1)

HSP 1 Score: 204 bits (519), Expect = 3.76e-64
Identity = 102/103 (99.03%), Postives = 103/103 (100.00%), Query Frame = 0 

Query: 1   MDPTNGNNATSKSPNLASKQRLRWTHDLHERFVNAVAQLGGPDRATPKGVLRVMGVQGLT 60
           MDPTNGNNATSK+PNLASKQRLRWTHDLHERFVNAVAQLGGPDRATPKGVLRVMGVQGLT
Sbjct: 1   MDPTNGNNATSKNPNLASKQRLRWTHDLHERFVNAVAQLGGPDRATPKGVLRVMGVQGLT 60

Query: 61  IYHVKSHLQKYRLAKYLPDSSSDGKKTDKKDSSDILSNIDGSS 103
           IYHVKSHLQKYRLAKYLPDSSSDGKKTDKKDSSDILSNIDGSS
Sbjct: 61  IYHVKSHLQKYRLAKYLPDSSSDGKKTDKKDSSDILSNIDGSS 103

[Close]
BLAST of Cucsat.G1939 vs. ExPASy TrEMBL
Match: A0A6J1GFB1 (myb family transcription factor PHL7-like OS=Cucurbita moschata OX=3662 GN=LOC111453658 PE=3 SV=1)

HSP 1 Score: 189 bits (480), Expect = 1.53e-57
Identity = 94/103 (91.26%), Postives = 98/103 (95.15%), Query Frame = 0 

Query: 1   MDPTNGNNATSKSPNLASKQRLRWTHDLHERFVNAVAQLGGPDRATPKGVLRVMGVQGLT 60
           M+PTNG+N  SK PNLASKQRLRWTHDLHERFVNAVAQLGGPDRATPKGVLRVMGVQGLT
Sbjct: 31  MEPTNGSNDPSKPPNLASKQRLRWTHDLHERFVNAVAQLGGPDRATPKGVLRVMGVQGLT 90

Query: 61  IYHVKSHLQKYRLAKYLPDSSSDGKKTDKKDSSDILSNIDGSS 103
           IYHVKSHLQKYRLAKYLPDSSSDGKK DKKDS D+LSNI+GSS
Sbjct: 91  IYHVKSHLQKYRLAKYLPDSSSDGKKADKKDSIDVLSNIEGSS 133

[Close]
BLAST of Cucsat.G1939 vs. ExPASy TrEMBL
Match: A0A2P2LCH0 (Transcription factor OS=Rhizophora mucronata OX=61149 PE=3 SV=1)

HSP 1 Score: 180 bits (457), Expect = 7.32e-56
Identity = 87/103 (84.47%), Postives = 96/103 (93.20%), Query Frame = 0 

Query: 1   MDPTNGNNATSKSPNLASKQRLRWTHDLHERFVNAVAQLGGPDRATPKGVLRVMGVQGLT 60
           MDP NG N  S +P+LASKQRLRWTH+LHERFV+AVAQLGGPDRATPKGVLRVMGVQGLT
Sbjct: 31  MDPANGGNGLSNNPSLASKQRLRWTHELHERFVDAVAQLGGPDRATPKGVLRVMGVQGLT 90

Query: 61  IYHVKSHLQKYRLAKYLPDSSSDGKKTDKKDSSDILSNIDGSS 103
           IYHVKSHLQKYRLAKYLPD+SSDGKK DKK++ D+LSN+DGSS
Sbjct: 91  IYHVKSHLQKYRLAKYLPDTSSDGKKADKKETGDVLSNLDGSS 133

[Close]
BLAST of Cucsat.G1939 vs. ExPASy TrEMBL
Match: A0A6J1BT33 (myb family transcription factor PHL7 OS=Momordica charantia OX=3673 GN=LOC111005303 PE=3 SV=1)

HSP 1 Score: 183 bits (464), Expect = 1.69e-55
Identity = 91/103 (88.35%), Postives = 95/103 (92.23%), Query Frame = 0 

Query: 1   MDPTNGNNATSKSPNLASKQRLRWTHDLHERFVNAVAQLGGPDRATPKGVLRVMGVQGLT 60
           M+P+NG+N    +PNLASKQRLRWTHDLH RFVNAVAQLGGPDRATPKGVLRVMGVQGLT
Sbjct: 1   MEPSNGSNGPISNPNLASKQRLRWTHDLHNRFVNAVAQLGGPDRATPKGVLRVMGVQGLT 60

Query: 61  IYHVKSHLQKYRLAKYLPDSSSDGKKTDKKDSSDILSNIDGSS 103
           IYHVKSHLQKYRLAKYLPD SSDGKK DKKDSSDILSNID SS
Sbjct: 61  IYHVKSHLQKYRLAKYLPDCSSDGKKADKKDSSDILSNIDSSS 103

[Close]
BLAST of Cucsat.G1939 vs. TAIR 10
Match: AT2G01060.1 (myb-like HTH transcriptional regulator family protein )

HSP 1 Score: 162.2 bits (409), Expect = 2.3e-40
Identity = 83/103 (80.58%), Postives = 91/103 (88.35%), Query Frame = 0 

Query: 1   MDPTNGNNATSKSPNLASKQRLRWTHDLHERFVNAVAQLGGPDRATPKGVLRVMGVQGLT 60
           M+  NG   +S     ASKQRLRWTH+LHERFV+AVAQLGGPDRATPKGVLRVMGVQGLT
Sbjct: 1   MEADNGGPNSSH----ASKQRLRWTHELHERFVDAVAQLGGPDRATPKGVLRVMGVQGLT 60

Query: 61  IYHVKSHLQKYRLAKYLPDSSSDGKKTDKKDSSDILSNIDGSS 104
           IYHVKSHLQKYRLAKYLPDSSS+GKKTDKK+S D+LS +DGSS
Sbjct: 61  IYHVKSHLQKYRLAKYLPDSSSEGKKTDKKESGDMLSGLDGSS 99

[Close]
BLAST of Cucsat.G1939 vs. TAIR 10
Match: AT4G28610.1 (phosphate starvation response 1 )

HSP 1 Score: 101.3 bits (251), Expect = 4.8e-22
Identity = 50/94 (53.19%), Postives = 65/94 (69.15%), Query Frame = 0 

Query: 7   NNATSKSPNLASKQRLRWTHDLHERFVNAVAQLGGPDRATPKGVLRVMGVQGLTIYHVKS 66
           +  +S S N   K R+RWT +LHE FV AV  LGG +RATPKGVL++M V+GLTIYHVKS
Sbjct: 213 STTSSNSNNGTGKARMRWTPELHEAFVEAVNSLGGSERATPKGVLKIMKVEGLTIYHVKS 272

Query: 67  HLQKYRLAKYLPDSSSDGKKTDKKDSSDILSNID 101
           HLQKYR A+Y P+ S  G    K    + ++++D
Sbjct: 273 HLQKYRTARYRPEPSETGSPERKLTPLEHITSLD 306

[Close]
BLAST of Cucsat.G1939 vs. TAIR 10
Match: AT5G06800.1 (myb-like HTH transcriptional regulator family protein )

HSP 1 Score: 100.5 bits (249), Expect = 8.2e-22
Identity = 50/98 (51.02%), Postives = 68/98 (69.39%), Query Frame = 0 

Query: 3   PTNGNNATSKSPNLASKQRLRWTHDLHERFVNAVAQLGGPDRATPKGVLRVMGVQGLTIY 62
           P+   +  S +PN  +K R+RWT DLHE+FV  V +LGG D+ATPK +L+ M   GLTI+
Sbjct: 176 PSFSIHGGSMAPNCVNKTRIRWTQDLHEKFVECVNRLGGADKATPKAILKRMDSDGLTIF 235

Query: 63  HVKSHLQKYRLAKYLPDSSSDGKKTDKKDSSDILSNID 101
           HVKSHLQKYR+AKY+P+S     K +K+  +  LS +D
Sbjct: 236 HVKSHLQKYRIAKYMPESQEG--KFEKRACAKELSQLD 271

[Close]
BLAST of Cucsat.G1939 vs. TAIR 10
Match: AT5G06800.2 (myb-like HTH transcriptional regulator family protein )

HSP 1 Score: 100.5 bits (249), Expect = 8.2e-22
Identity = 50/98 (51.02%), Postives = 68/98 (69.39%), Query Frame = 0 

Query: 3   PTNGNNATSKSPNLASKQRLRWTHDLHERFVNAVAQLGGPDRATPKGVLRVMGVQGLTIY 62
           P+   +  S +PN  +K R+RWT DLHE+FV  V +LGG D+ATPK +L+ M   GLTI+
Sbjct: 176 PSFSIHGGSMAPNCVNKTRIRWTQDLHEKFVECVNRLGGADKATPKAILKRMDSDGLTIF 235

Query: 63  HVKSHLQKYRLAKYLPDSSSDGKKTDKKDSSDILSNID 101
           HVKSHLQKYR+AKY+P+S     K +K+  +  LS +D
Sbjct: 236 HVKSHLQKYRIAKYMPESQEG--KFEKRACAKELSQLD 271

[Close]
BLAST of Cucsat.G1939 vs. TAIR 10
Match: AT3G04450.1 (Homeodomain-like superfamily protein )

HSP 1 Score: 100.1 bits (248), Expect = 1.1e-21
Identity = 47/83 (56.63%), Postives = 61/83 (73.49%), Query Frame = 0 

Query: 1   MDPTNGNNATSKSPNLASKQRLRWTHDLHERFVNAVAQLGGPDRATPKGVLRVMGVQGLT 60
           M+P N  +  + S  + SKQR+RWT +LHE FV A+ QLGG +RATPK VL+++   GLT
Sbjct: 222 MEPFNAKSPPASS--MTSKQRMRWTPELHEAFVEAINQLGGSERATPKAVLKLINSPGLT 281

Query: 61  IYHVKSHLQKYRLAKYLPDSSSD 84
           +YHVKSHLQKYR A+Y P+ S D
Sbjct: 282 VYHVKSHLQKYRTARYKPELSKD 302

The following BLAST results are available for this feature:
BLAST of Cucsat.G1939 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9SJW03.2e-3980.58Myb family transcription factor PHL7 OS=Arabidopsis thaliana OX=3702 GN=PHL7 PE=... [more]
A2X0Q01.5e-2359.77Protein PHOSPHATE STARVATION RESPONSE 3 OS=Oryza sativa subsp. indica OX=39946 G... [more]
Q6YXZ41.5e-2359.77Protein PHOSPHATE STARVATION RESPONSE 3 OS=Oryza sativa subsp. japonica OX=39947... [more]
B8ANX94.7e-2256.86Protein PHOSPHATE STARVATION RESPONSE 1 OS=Oryza sativa subsp. indica OX=39946 G... [more]
Q10LZ14.7e-2256.86Protein PHOSPHATE STARVATION RESPONSE 1 OS=Oryza sativa subsp. japonica OX=39947... [more]
BLAST of Cucsat.G1939 vs. NCBI nr
Match NameE-valueIdentityDescription
ACA24492.12.14e-64100.00putative myb family transcription factor [Cucumis sativus] >KGN49010.1 hypotheti... [more]
XP_031743095.14.03e-64100.00LOW QUALITY PROTEIN: myb family transcription factor PHL7 [Cucumis sativus][more]
XP_008440942.17.77e-6499.03PREDICTED: protein PHR1-LIKE 1-like [Cucumis melo] >XP_008440943.1 PREDICTED: pr... [more]
XP_038881985.13.72e-5894.17myb family transcription factor PHL7 [Benincasa hispida] >XP_038881986.1 myb fam... [more]
XP_022950611.13.15e-5791.26myb family transcription factor PHL7-like [Cucurbita moschata] >XP_022950612.1 m... [more]
BLAST of Cucsat.G1939 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
B3FNK51.03e-64100.00Putative myb family transcription factor OS=Cucumis sativus OX=3659 GN=Csa_6G510... [more]
A0A1S3B2B23.76e-6499.03protein PHR1-LIKE 1-like OS=Cucumis melo OX=3656 GN=LOC103485207 PE=3 SV=1[more]
A0A6J1GFB11.53e-5791.26myb family transcription factor PHL7-like OS=Cucurbita moschata OX=3662 GN=LOC11... [more]
A0A2P2LCH07.32e-5684.47Transcription factor OS=Rhizophora mucronata OX=61149 PE=3 SV=1[more]
A0A6J1BT331.69e-5588.35myb family transcription factor PHL7 OS=Momordica charantia OX=3673 GN=LOC111005... [more]
BLAST of Cucsat.G1939 vs. TAIR 10
Match NameE-valueIdentityDescription
AT2G01060.12.3e-4080.58myb-like HTH transcriptional regulator family protein [more]
AT4G28610.14.8e-2253.19phosphate starvation response 1 [more]
AT5G06800.18.2e-2251.02myb-like HTH transcriptional regulator family protein [more]
AT5G06800.28.2e-2251.02myb-like HTH transcriptional regulator family protein [more]
AT3G04450.11.1e-2156.63Homeodomain-like superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006447Myb domain, plantsTIGRFAMTIGR01557TIGR01557coord: 19..74
e-value: 1.5E-26
score: 90.5
NoneNo IPR availableGENE3D1.10.10.60coord: 18..77
e-value: 6.2E-30
score: 105.1
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..20
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 79..100
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 79..95
NoneNo IPR availablePANTHERPTHR31314:SF112MYB FAMILY TRANSCRIPTION FACTOR PHL7coord: 1..127
IPR025756MYB-CC type transcription factor, LHEQLE-containing domainPFAMPF14379Myb_CC_LHEQLEcoord: 105..127
e-value: 5.8E-11
score: 41.9
IPR017930Myb domainPFAMPF00249Myb_DNA-bindingcoord: 22..72
e-value: 3.1E-8
score: 33.7
IPR017930Myb domainPROSITEPS51294HTH_MYBcoord: 16..76
score: 13.699375
IPR044848PHR1-likePANTHERPTHR31314MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKEcoord: 1..127
IPR009057Homeobox-like domain superfamilySUPERFAMILY46689Homeodomain-likecoord: 18..74

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cucsat.G1939.T14Cucsat.G1939.T14mRNA
Cucsat.G1939.T8Cucsat.G1939.T8mRNA
Cucsat.G1939.T3Cucsat.G1939.T3mRNA
Cucsat.G1939.T1Cucsat.G1939.T1mRNA
Cucsat.G1939.T6Cucsat.G1939.T6mRNA
Cucsat.G1939.T5Cucsat.G1939.T5mRNA
Cucsat.G1939.T2Cucsat.G1939.T2mRNA
Cucsat.G1939.T7Cucsat.G1939.T7mRNA
Cucsat.G1939.T18Cucsat.G1939.T18mRNA
Cucsat.G1939.T11Cucsat.G1939.T11mRNA
Cucsat.G1939.T9Cucsat.G1939.T9mRNA
Cucsat.G1939.T16Cucsat.G1939.T16mRNA
Cucsat.G1939.T15Cucsat.G1939.T15mRNA
Cucsat.G1939.T12Cucsat.G1939.T12mRNA
Cucsat.G1939.T4Cucsat.G1939.T4mRNA
Cucsat.G1939.T17Cucsat.G1939.T17mRNA
Cucsat.G1939.T21Cucsat.G1939.T21mRNA
Cucsat.G1939.T19Cucsat.G1939.T19mRNA
Cucsat.G1939.T13Cucsat.G1939.T13mRNA
Cucsat.G1939.T10Cucsat.G1939.T10mRNA
Cucsat.G1939.T20Cucsat.G1939.T20mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
cellular_component GO:0005634 nucleus
molecular_function GO:0003677 DNA binding
molecular_function GO:0003700 DNA-binding transcription factor activity