Cucsat.G13169.T6 (mRNA) Cucumber (B10) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.AGACTAATACACATCTCTGTTTTCAGTTTTCACCTTCTTTATCTTCTTTTTCACTCCCTTTTCCCTCCATCCTCAACTCTTTTCTCGAAGCTTCTTTCACATTAATCACCCCAAGCAAACGCCGCCCCCGCCCCCGCCACTCCCTTTCTTTCTTCCTTCTGCCCAATCAACTCTTCCACCTCTCATCAACGGTATTGTTTCTCCTACTTCTTCTTCTTCTTTTCCTCTTTTCCAAATTCTTGGCGTTCCAGTTTTAAGTTATGATAAGAAGATAATTGAATTGATTACGCTTGAAAACTCTATTCTTCCTCTGGGTTTCATTTTTTATTGCAAATTCAATTGTTGTTTCTGTTTACTTAACACAGACACCGAATTTTGCTTTACAGAGTCGACTCTAGTTTCCCATTTCAGGACTTGGGTTTGCCGCCATTTTTTGTTTTTGATGATCTGAATTAGGAAATGGGGTATTTATATTTGATGTTTTATGTCAGTTTTTCGCTGTGTCTCTTCCATTGCTGATGGATTTTCCCTTTTTTCCCTCTTTCCTACCCTGTTAATTCAGTCGAGAGGGATTTTTTTTTCATATGCTTTTAGAAATCAATGTGTGATCATCATCTTTCTTTTTTCCACTTTCTTCCTGAGTGATTTAGTTATAAATATTGATAACTTTCAGATGGATTTGAGAGATAATAGTGAAAGATGTCTTCTGGCAGTGGACGCAGACGAGGGAGAGGAAGGGATAGAGGGAGGATCATTAGAGAGTCCAGCGGGAACAGAATTAAATGATTGTGATGGAGATATTATTCTTGAGCCTTATGAGGGAATGGAATTTGAATCGGAAGATGCTGCCAAGATTTTCTATGATAAGTATGCTCGTCAACTGGGATTTGTTATGCGTGTGATGTCCTGTCGTCGTTCTGAAAAAGATGGGCGAATACTTGCTCGAAGACTTGGATGCAACAAAGAGGGACATTGTGTCAGCATCCGAGGTAAATTTGGGGCAGTTCGGAAGCCACGGCCGAGTACACGAGAAGGCTGTAAGGCAATGATTCATGTCAAATATGATAAGTCTGGGAAATGGGTGATTACAAAATTTGTAAAGGAACATAATCATCCTCTTGTGGTTTCTCCTCGTGAAGCTCGGCAGACCATGGTCAGTATTTCTCTTCCCCTATTGTTATCTTCAATCAAACATAATACTTTAGAATAAAACTGTGTTCTTTACTTTTTAAGGGAGATGGAAGTAAAAACATCTTTGCCTCTTCACCCCTCAACTGCTTTGTAGGGTATCTATAAAAATTCAAAGATTATGTATATTTACTGTAGTTGTTACCTTGCTTTTAGGGAGAAACCTCTAGTTTCATCAATAAATTGTTGGAGATTAAAATGGTTTTTTTCTGATCGAAGGACATTAATTTTCTCTATCGGAAGCAAGTATACTAAAGAAGCGGCAAAATTTTATAAGACCAATTTTTAGCATGAAGAATTGTTGATCGTGCATAATGTTTATATTAGTCCTAGTATTAAAATGAATGGATTGTTAAAGAAAGGAAAACAAAGATGAATTTATGAAGTTTATCCAAAAACAATTTTGTCACTTCGCACATTAAAACCACAATTTTCTCGTTCTGCATATTATCTAATCACTATGTCACAGTAAGTTTTACTTTTAGCAAAGCAACTGAACTATTGTTTGCATATTTTATTGACGCATATGCCACTGCTAACCTCTTTAAGTTCGAGTATGGGTTTAACAATAATTTTAGTTTTGTTAGGAGGAAGCTTGGCCTTTTAACTGACTAATATGAATACATCTATTAAATAAAACTGACCTGACCATGATTAGTTCAGCCAGTTAAGGAGAAAAATTGAACGTCCACTTTGGAGTTTGGTAGGGTGCTTGGGTTTGGCGAAGCAAAAGTTATATAGGCAATATACTTGCTAACTCATTTGGATGAAATATGAATTAAGGAGAAGCAAATAACATGCTTATTCCCTTAGAAGTGCTAATATAGACTATGGGGTGTGTTGTTTTGTTGGGTCTTTCGAGAGAGAAACAAAAGAACCTTTCAAAGCTTAGAAAGAGGTCCTTATGATGTTCAGTCTCTTGCTAGGTCCGATGTTTTTATTTGGGTGTAGGCGAAGAAACCTTTTTGTAACAGTAAGTTGGGTCTTATTTTCTAGATTGGAGATCCTTCTTCCTTTAATGGAAAATTCTCGCTTTTGAGCGTGTTTTCTGGATGCTCTTGTGTTCGTTCATTCTTTCTTAATGAATGTTCAGTTCTTTAAAAAAACGTGTGTAAATATATGATATATGTACATATACAAATATATAGACTAAATATGGTTTGGTCCTGTCTGGTATTTTGTTATGAAATTCTTTAGGATGACGCTCCTTCCTTGCTTCTATATTGTGGAACAAAATACAACGAGCGGATTCTCCTTGAGACTGTCCCCCCTAAGCCAACTTGTTCTCCATTTCCGAACTTCCTACATCTTGTCTCTTCTGATTTTTGTTCGAGCTTTTTGGAGTGTAGTAACCAGATAGCTGCACACACACATGACCAGATGACAAATGAATATAACTATTCAGTCTCAATACTGATGGCTATACTGATATAATTACTAAGATTTGGGAAAAGTACAGTTGTTCGTACATACTAACTTGAGCTTCATACCTTCCAGGCATGTCTTTCCCTTTTCAACCACCAATCGGTATATGTTACCTAGCCTTCTTGTTCTATAGGTGAATTTCATCGATTTTTTAGAACATAACATGTTTTGATACTTTCGTTTGTGATGCCTTACGTGATTGTCTGCATTTTCACCTCTATCTTAATGGTTGGAGCCATGATGATCACCCACCTAGCATATTAGTTGCTCGTGAATATTCTACTATACCATTCGTAGTTTGGGAAACTAGTAAACTGACGAGAGATTTGAAACTTAACAACAACAAAAAAAATCTTTAACTGCAATTACAGAAGAAGAATGAATTGTATGTTCATAGCTAAATCTTTCTGTGGGTGATTGACATATAACTATAGTATTGCATCATGATGAAAAATCATTGATTTTGAACTTTCCTTGCAGGATGAAAAAGACAAGCAAATACAGGAACTCACTATAGAGCTGCGGAATAAGAAACGGTTATGTTCGACATACCAAGAACAGCTTGCTGCATTTATGAAAATTGTTGAAGAACATACCGACCAATTATCAAAAAAAGTTCAAAATGTAGTTACCAACCTTAAAGAATTTGAGTCCATTGAGCAAGAACTATTGCATCCTAGGTAGCCTAGCCATTGAGTGAGTATCTGATTGCTATTTAACCCTTCTCCTTCATTTTGAGATTTTTGTTCACTTCATCAAAAAGTATTCATTATGTCATTAAATACAACTAGCTTCTTATGCAGTGTGGTCGGTGGCCATCGATATTTGGAGGTTGGTAGCAGACAAAGAACAATGAGAACCCTTGAGAAAGCCCCTCAAAAGGCATTCTTTACAGTCTACCCTGCCCCACTCCAAACTCAGAGGGAGCTATAGAAATGAGCAATGCAATATTTGTTGTGTGTATCATAGCAAGCAGTGGCACGAAGTTGAAGTACGTGGAGAACATCTGAGCGGAGGGAAAGTTTTGAATGAAGAGACGATTTTATTTACCTCTCTAAGTGAATAACCAATGCAGATTTTTTTAGAAATTTTGCTGAAATTTTATTTGCTTTGTGTATATGTTTGCATCTGATACTGCAAGCAGAACCATCCAAATCCCATCCTGGATGCCCACAGAGCTATAATGAGAAAATCAATATTAGAATTGTTTCATTCTGCTAATTTTTACCAGGATTATCTGTTGGTCTGACTTGTAGTTATTTTATATCTTTTCTCAACTTGGTGGAACCACCGCCACGCTTTCCCCAGGTTGAGATGCTACTTTTCTTTCTTGTGTTTATTTCAGGTGACTTAAAAGCCCAACTTATTAATCTCTCTTTTATAATAACAAAAGAATTGGGAATGAATTTCAGATTTGGG ACTAATACACATCTCTGTTTTCAGTTTTCACCTTCTTTATCTTCTTTTTCACTCCCTTTTCCCTCCATCCTCAACTCTTTTCTCGAAGCTTCTTTCACATTAATCACCCCAAGCAAACGCCGCCCCCGCCCCCGCCACTCCCTTTCTTTCTTCCTTCTGCCCAATCAACTCTTCCACCTCTCATCAACGATGGATTTGAGAGATAATAGTGAAAGATGTCTTCTGGCAGTGGACGCAGACGAGGGAGAGGAAGGGATAGAGGGAGGATCATTAGAGAGTCCAGCGGGAACAGAATTAAATGATTGTGATGGAGATATTATTCTTGAGCCTTATGAGGGAATGGAATTTGAATCGGAAGATGCTGCCAAGATTTTCTATGATAAGTATGCTCGTCAACTGGGATTTGTTATGCGTGTGATGTCCTGTCGTCGTTCTGAAAAAGATGGGCGAATACTTGCTCGAAGACTTGGATGCAACAAAGAGGGACATTGTGTCAGCATCCGAGGTAAATTTGGGGCAGTTCGGAAGCCACGGCCGAGTACACGAGAAGGCTGTAAGGCAATGATTCATGTCAAATATGATAAGTCTGGGAAATGGGTGATTACAAAATTTGTAAAGGAACATAATCATCCTCTTGTGGTTTCTCCTCGTGAAGCTCGGCAGACCATGGATGAAAAAGACAAGCAAATACAGGAACTCACTATAGAGCTGCGGAATAAGAAACGGTTATGTTCGACATACCAAGAACAGCTTGCTGCATTTATGAAAATTGTTGAAGAACATACCGACCAATTATCAAAAAAAGTTCAAAATGTAGTTACCAACCTTAAAGAATTTGAGTCCATTGAGCAAGAACTATTGCATCCTAGGTAG TNTHLCFQFSPSLSSFSLPFPSILNSFLEASFTLITPSKRRPRPRHSLSFFLLPNQLFHLSSTMDLRDNSERCLLAVDADEGEEGIEGGSLESPAGTELNDCDGDIILEPYEGMEFESEDAAKIFYDKYARQLGFVMRVMSCRRSEKDGRILARRLGCNKEGHCVSIRGKFGAVRKPRPSTREGCKAMIHVKYDKSGKWVITKFVKEHNHPLVVSPREARQTMDEKDKQIQELTIELRNKKRLCSTYQEQLAAFMKIVEEHTDQLSKKVQNVVTNLKEFESIEQELLHPR Homology
BLAST of Cucsat.G13169.T6 vs. ExPASy Swiss-Prot
Match: Q9SZL8 (Protein FAR1-RELATED SEQUENCE 5 OS=Arabidopsis thaliana OX=3702 GN=FRS5 PE=1 SV=1) HSP 1 Score: 115.2 bits (287), Expect = 1.3e-24 Identity = 79/209 (37.80%), Postives = 110/209 (52.63%), Query Frame = 0
BLAST of Cucsat.G13169.T6 vs. ExPASy Swiss-Prot
Match: Q9SWG3 (Protein FAR-RED IMPAIRED RESPONSE 1 OS=Arabidopsis thaliana OX=3702 GN=FAR1 PE=1 SV=1) HSP 1 Score: 85.1 bits (209), Expect = 1.4e-15 Identity = 40/110 (36.36%), Postives = 64/110 (58.18%), Query Frame = 0
BLAST of Cucsat.G13169.T6 vs. ExPASy Swiss-Prot
Match: Q3EBQ3 (Protein FAR1-RELATED SEQUENCE 2 OS=Arabidopsis thaliana OX=3702 GN=FRS2 PE=1 SV=1) HSP 1 Score: 84.3 bits (207), Expect = 2.4e-15 Identity = 59/174 (33.91%), Postives = 94/174 (54.02%), Query Frame = 0
BLAST of Cucsat.G13169.T6 vs. ExPASy Swiss-Prot
Match: Q9LIE5 (Protein FAR-RED ELONGATED HYPOCOTYL 3 OS=Arabidopsis thaliana OX=3702 GN=FHY3 PE=1 SV=1) HSP 1 Score: 78.6 bits (192), Expect = 1.3e-13 Identity = 50/141 (35.46%), Postives = 67/141 (47.52%), Query Frame = 0
BLAST of Cucsat.G13169.T6 vs. ExPASy Swiss-Prot
Match: Q9ZVC9 (Protein FAR1-RELATED SEQUENCE 3 OS=Arabidopsis thaliana OX=3702 GN=FRS3 PE=1 SV=2) HSP 1 Score: 75.1 bits (183), Expect = 1.5e-12 Identity = 47/136 (34.56%), Postives = 64/136 (47.06%), Query Frame = 0
BLAST of Cucsat.G13169.T6 vs. NCBI nr
Match: XP_004136586.3 (protein FAR1-RELATED SEQUENCE 5 [Cucumis sativus] >XP_011652117.2 protein FAR1-RELATED SEQUENCE 5 [Cucumis sativus]) HSP 1 Score: 449 bits (1154), Expect = 7.85e-158 Identity = 227/227 (100.00%), Postives = 227/227 (100.00%), Query Frame = 0
BLAST of Cucsat.G13169.T6 vs. NCBI nr
Match: XP_008443098.1 (PREDICTED: protein FAR1-RELATED SEQUENCE 5 [Cucumis melo]) HSP 1 Score: 441 bits (1133), Expect = 1.24e-154 Identity = 224/227 (98.68%), Postives = 225/227 (99.12%), Query Frame = 0
BLAST of Cucsat.G13169.T6 vs. NCBI nr
Match: XP_022154282.1 (protein FAR1-RELATED SEQUENCE 5 [Momordica charantia]) HSP 1 Score: 434 bits (1115), Expect = 6.86e-152 Identity = 219/227 (96.48%), Postives = 223/227 (98.24%), Query Frame = 0
BLAST of Cucsat.G13169.T6 vs. NCBI nr
Match: XP_038905874.1 (protein FAR1-RELATED SEQUENCE 2 isoform X1 [Benincasa hispida] >XP_038905875.1 protein FAR1-RELATED SEQUENCE 2 isoform X1 [Benincasa hispida]) HSP 1 Score: 431 bits (1109), Expect = 5.63e-151 Identity = 218/227 (96.04%), Postives = 222/227 (97.80%), Query Frame = 0
BLAST of Cucsat.G13169.T6 vs. NCBI nr
Match: XP_023526121.1 (protein FAR1-RELATED SEQUENCE 5-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_023526122.1 protein FAR1-RELATED SEQUENCE 5-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_023526123.1 protein FAR1-RELATED SEQUENCE 5-like isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 428 bits (1100), Expect = 1.32e-149 Identity = 217/227 (95.59%), Postives = 222/227 (97.80%), Query Frame = 0
BLAST of Cucsat.G13169.T6 vs. ExPASy TrEMBL
Match: A0A1S3B7B4 (protein FAR1-RELATED SEQUENCE 5 OS=Cucumis melo OX=3656 GN=LOC103486797 PE=4 SV=1) HSP 1 Score: 441 bits (1133), Expect = 6.02e-155 Identity = 224/227 (98.68%), Postives = 225/227 (99.12%), Query Frame = 0
BLAST of Cucsat.G13169.T6 vs. ExPASy TrEMBL
Match: A0A6J1DLA3 (protein FAR1-RELATED SEQUENCE 5 OS=Momordica charantia OX=3673 GN=LOC111021572 PE=4 SV=1) HSP 1 Score: 434 bits (1115), Expect = 3.32e-152 Identity = 219/227 (96.48%), Postives = 223/227 (98.24%), Query Frame = 0
BLAST of Cucsat.G13169.T6 vs. ExPASy TrEMBL
Match: A0A6J1F5F7 (protein FAR1-RELATED SEQUENCE 5-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111442478 PE=4 SV=1) HSP 1 Score: 426 bits (1094), Expect = 5.25e-149 Identity = 216/227 (95.15%), Postives = 221/227 (97.36%), Query Frame = 0
BLAST of Cucsat.G13169.T6 vs. ExPASy TrEMBL
Match: A0A6J1IYB6 (protein FAR1-RELATED SEQUENCE 5-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111481745 PE=4 SV=1) HSP 1 Score: 424 bits (1091), Expect = 1.50e-148 Identity = 216/227 (95.15%), Postives = 221/227 (97.36%), Query Frame = 0
BLAST of Cucsat.G13169.T6 vs. ExPASy TrEMBL
Match: A0A6J1J157 (protein FAR1-RELATED SEQUENCE 5-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111481745 PE=4 SV=1) HSP 1 Score: 424 bits (1091), Expect = 1.80e-148 Identity = 216/227 (95.15%), Postives = 221/227 (97.36%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
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