Cucsat.G13169 (gene) Cucumber (B10) v3

Overview
NameCucsat.G13169
Typegene
OrganismCucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Descriptionprotein FAR1-RELATED SEQUENCE 5
Locationctg1838: 1495588 .. 1499619 (+)
RNA-Seq ExpressionCucsat.G13169
SyntenyCucsat.G13169
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
AAATCCGAACCCACAATACAAAGCAACAACACAAAAGACTAATACACATCTCTGTTTTCAGTTTTCACCTTCTTTATCTTCTTTTTCACTCCCTTTTCCCTCCATCCTCAACTCTTTTCTCGAAGCTTCTTTCACATTAATCACCCCAAGCAAACGCCGCCCCCGCCCCCGCCACTCCCTTTCTTTCTTCCTTCTGCCCAATCAACTCTTCCACCTCTCATCAACGGTATTGTTTCTCCTACTTCTTCTTCTTCTTTTCCTCTTTTCCAAATTCTTGGCGTTCCAGTTTTAAGTTATGATAAGAAGATAATTGAATTGATTACGCTTGAAAACTCTATTCTTCCTCTGGGTTTCATTTTTTATTGCAAATTCAATTGTTGTTTCTGTTTACTTAACACAGACACCGAATTTTGCTTTACAGAGTCGACTCTAGTTTCCCATTTCAGGACTTGGGTTTGCCGCCATTTTTTGTTTTTGATGATCTGAATTAGGAAATGGGGTATTTATATTTGATGTTTTATGTCAGTTTTTCGCTGTGTCTCTTCCATTGCTGATGGATTTTCCCTTTTTTCCCTCTTTCCTACCCTGTTAATTCAGTCGAGAGGGATTTTTTTTTCATATGCTTTTAGAAATCAATGTGTGATCATCATCTTTCTTTTTTCCACTTTCTTCCTGAGTGATTTAGTTATAAATATTGATAACTTTCAGATGGATTTGAGAGATAATAGTGAAAGATGTCTTCTGGCAGTGGACGCAGACGAGGGAGAGGAAGGGATAGAGGGAGGATCATTAGAGAGTCCAGCGGGAACAGAATTAAATGATTGTGATGGAGATATTATTCTTGAGCCTTATGAGGGAATGGAATTTGAATCGGAAGATGCTGCCAAGATTTTCTATGATAAGTATGCTCGTCAACTGGGATTTGTTATGCGTGTGATGTCCTGTCGTCGTTCTGAAAAAGATGGGCGAATACTTGCTCGAAGACTTGGATGCAACAAAGAGGGACATTGTGTCAGCATCCGAGGTAAATTTGGGGCAGTTCGGAAGCCACGGCCGAGTACACGAGAAGGCTGTAAGGCAATGATTCATGTCAAATATGATAAGTCTGGGAAATGGGTGATTACAAAATTTGTAAAGGAACATAATCATCCTCTTGTGGTTTCTCCTCGTGAAGCTCGGCAGACCATGGTCAGTATTTCTCTTCCCCTATTGTTATCTTCAATCAAACATAATACTTTAGAATAAAACTGTGTTCTTTACTTTTTAAGGGAGATGGAAGTAAAAACATCTTTGCCTCTTCACCCCTCAACTGCTTTGTAGGGTATCTATAAAAATTCAAAGATTATGTATATTTACTGTAGTTGTTACCTTGCTTTTAGGGAGAAACCTCTAGTTTCATCAATAAATTGTTGGAGATTAAAATGGTTTTTTTCTGATCGAAGGACATTAATTTTCTCTATCGGAAGCAAGTATACTAAAGAAGCGGCAAAATTTTATAAGACCAATTTTTAGCATGAAGAATTGTTGATCGTGCATAATGTTTATATTAGTCCTAGTATTAAAATGAATGGATTGTTAAAGAAAGGAAAACAAAGATGAATTTATGAAGTTTATCCAAAAACAATTTTGTCACTTCGCACATTAAAACCACAATTTTCTCGTTCTGCATATTATCTAATCACTATGTCACAGTAAGTTTTACTTTTAGCAAAGCAACTGAACTATTGTTTGCATATTTTATTGACGCATATGCCACTGCTAACCTCTTTAAGTTCGAGTATGGGTTTAACAATAATTTTAGTTTTGTTAGGAGGAAGCTTGGCCTTTTAACTGACTAATATGAATACATCTATTAAATAAAACTGACCTGACCATGATTAGTTCAGCCAGTTAAGGAGAAAAATTGAACGTCCACTTTGGAGTTTGGTAGGGTGCTTGGGTTTGGCGAAGCAAAAGTTATATAGGCAATATACTTGCTAACTCATTTGGATGAAATATGAATTAAGGAGAAGCAAATAACATGCTTATTCCCTTAGAAGTGCTAATATAGACTATGGGGTGTGTTGTTTTGTTGGGTCTTTCGAGAGAGAAACAAAAGAACCTTTCAAAGCTTAGAAAGAGGTCCTTATGATGTTCAGTCTCTTGCTAGGTCCGATGTTTTTATTTGGGTGTAGGCGAAGAAACCTTTTTGTAACAGTAAGTTGGGTCTTATTTTCTAGATTGGAGATCCTTCTTCCTTTAATGGAAAATTCTCGCTTTTGAGCGTGTTTTCTGGATGCTCTTGTGTTCGTTCATTCTTTCTTAATGAATGTTCAGTTCTTTAAAAAAACGTGTGTAAATATATGATATATGTACATATACAAATATATAGACTAAATATGGTTTGGTCCTGTCTGGTATTTTGTTATGAAATTCTTTAGGATGACGCTCCTTCCTTGCTTCTATATTGTGGAACAAAATACAACGAGCGGATTCTCCTTGAGACTGTCCCCCCTAAGCCAACTTGTTCTCCATTTCCGAACTTCCTACATCTTGTCTCTTCTGATTTTTGTTCGAGCTTTTTGGAGTGTAGTAACCAGATAGCTGCACACACACATGACCAGATGACAAATGAATATAACTATTCAGTCTCAATACTGATGGCTATACTGATATAATTACTAAGATTTGGGAAAAGTACAGTTGTTCGTACATACTAACTTGAGCTTCATACCTTCCAGGCATGTCTTTCCCTTTTCAACCACCAATCGGTATATGTTACCTAGCCTTCTTGTTCTATAGGTGAATTTCATCGATTTTTTAGAACATAACATGTTTTGATACTTTCGTTTGTGATGCCTTACGTGATTGTCTGCATTTTCACCTCTATCTTAATGGTTGGAGCCATGATGATCACCCACCTAGCATATTAGTTGCTCGTGAATATTCTACTATACCATTCGTAGTTTGGGAAACTAGTAAACTGACGAGAGATTTGAAACTTAACAACAACAAAAAAAATCTTTAACTGCAATTACAGAAGAAGAATGAATTGTATGTTCATAGCTAAATCTTTCTGTGGGTGATTGACATATAACTATAGTATTGCATCATGATGAAAAATCATTGATTTTGAACTTTCCTTGCAGGATGAAAAAGACAAGCAAATACAGGAACTCACTATAGAGCTGCGGAATAAGAAACGGTTATGTTCGACATACCAAGAACAGCTTGCTGCATTTATGAAAATTGTTGAAGAACATACCGACCAATTATCAAAAAAAGTTCAAAATGTAGTTACCAACCTTAAAGAATTTGAGTCCATTGAGCAAGAACTATTGCATCCTAGGTAGCCTAGCCATTGAGTGAGTATCTGATTGCTATTTAACCCTTCTCCTTCATTTTGAGATTTTTGTTCACTTCATCAAAAAGTATTCATTATGTCATTAAATACAACTAGCTTCTTATGCAGTGTGGTCGGTGGCCATCGATATTTGGAGGTTGGTAGCAGACAAAGAACAATGAGAACCCTTGAGAAAGCCCCTCAAAAGGCATTCTTTACAGTCTACCCTGCCCCACTCCAAACTCAGAGGGAGCTATAGAAATGAGCAATGCAATATTTGTTGTGTGTATCATAGCAAGCAGTGGCACGAAGTTGAAGTACGTGGAGAACATCTGAGCGGAGGGAAAGTTTTGAATGAAGAGACGATTTTATTTACCTCTCTAAGTGAATAACCAATGCAGATTTTTTTAGAAATTTTGCTGAAATTTTATTTGCTTTGTGTATATGTTTGCATCTGATACTGCAAGCAGAACCATCCAAATCCCATCCTGGATGCCCACAGAGCTATAATGAGAAAATCAATATTAGAATTGTTTCATTCTGCTAATTTTTACCAGGATTATCTGTTGGTCTGACTTGTAGTTATTTTATATCTTTTCTCAACTTGGTGGAACCACCGCCACGCTTTCCCCAGGTTGAGATGCTACTTTTCTTTCTTGTGTTTATTTCAGGTGACTTAAAAGCCCAACTTATTAATCTCTCTTTTATAATAACAAAAGAATTGGGAATGAATTTCAGATTTGGGC

Coding sequence (CDS)

AATCCGAACCCACAATACAAAGCAACAACACAAAAGACTAATACACATCTCTGTTTTCAGTTTTCACCTTCTTTATCTTCTTTTTCACTCCCTTTTCCCTCCATCCTCAACTCTTTTCTCGAAGCTTCTTTCACATTAATCACCCCAAGCAAACGCCGCCCCCGCCCCCGCCACTCCCTTTCTTTCTTCCTTCTGCCCAATCAACTCTTCCACCTCTCATCAACGATGGATTTGAGAGATAATAGTGAAAGATGTCTTCTGGCAGTGGACGCAGACGAGGGAGAGGAAGGGATAGAGGGAGGATCATTAGAGAGTCCAGCGGGAACAGAATTAAATGATTGTGATGGAGATATTATTCTTGAGCCTTATGAGGGAATGGAATTTGAATCGGAAGATGCTGCCAAGATTTTCTATGATAAGTATGCTCGTCAACTGGGATTTGTTATGCGTGTGATGTCCTGTCGTCGTTCTGAAAAAGATGGGCGAATACTTGCTCGAAGACTTGGATGCAACAAAGAGGGACATTGTGTCAGCATCCGAGGTAAATTTGGGGCAGTTCGGAAGCCACGGCCGAGTACACGAGAAGGCTGTAAGGCAATGATTCATGTCAAATATGATAAGTCTGGGAAATGGGTGATTACAAAATTTGTAAAGGAACATAATCATCCTCTTGTGGTTTCTCCTCGTGAAGCTCGGCAGACCATGGATGAAAAAGACAAGCAAATACAGGAACTCACTATAGAGCTGCGGAATAAGAAACGGTTATGTTCGACATACCAAGAACAGCTTGCTGCATTTATGAAAATTGTTGAAGAACATACCGACCAATTATCAAAAAAAGTTCAAAATGTAGTTACCAACCTTAAAGAATTTGAGTCCATTGAGCAAGAACTATTGCATCCTAGGTAG

Protein sequence

NPNPQYKATTQKTNTHLCFQFSPSLSSFSLPFPSILNSFLEASFTLITPSKRRPRPRHSLSFFLLPNQLFHLSSTMDLRDNSERCLLAVDADEGEEGIEGGSLESPAGTELNDCDGDIILEPYEGMEFESEDAAKIFYDKYARQLGFVMRVMSCRRSEKDGRILARRLGCNKEGHCVSIRGKFGAVRKPRPSTREGCKAMIHVKYDKSGKWVITKFVKEHNHPLVVSPREARQTMDEKDKQIQELTIELRNKKRLCSTYQEQLAAFMKIVEEHTDQLSKKVQNVVTNLKEFESIEQELLHPR
Homology
[Close]
BLAST of Cucsat.G13169 vs. ExPASy Swiss-Prot
Match: Q9SZL8 (Protein FAR1-RELATED SEQUENCE 5 OS=Arabidopsis thaliana OX=3702 GN=FRS5 PE=1 SV=1)

HSP 1 Score: 103.2 bits (256), Expect = 3.1e-21
Identity = 68/180 (37.78%), Postives = 96/180 (53.33%), Query Frame = 0 

Query: 1   MEFESEDAAKIFYDKYARQLGFVMRVMSCRRSEKDGRILARRLGCNKEG--HCVSIRGKF 60
           +EFESE+AAK FY+ YAR++GF  RV S RRS +DG I+ R+  C KEG  +    R K 
Sbjct: 77  LEFESEEAAKAFYNSYARRIGFSTRVSSSRRSRRDGAIIQRQFVCAKEGFRNMNEKRTKD 136

Query: 61  GAVRKPRPSTREGCKAMIHVKYDKSGKWVITKFVKEHNHPLVVSP-----REARQTMDEK 120
             +++PR  TR GCKA + VK   SGKW+++ FVK+HNH LV        R  RQ     
Sbjct: 137 REIKRPRTITRVGCKASLSVKMQDSGKWLVSGFVKDHNHELVPPDQVHCLRSHRQISGPA 196

Query: 121 DKQIQELTIELRNKKRLCSTYQEQLAAFMKIVEEHTDQLSKKVQNVVTNLKEFESIEQEL 174
              I  L       +R+ S   ++     K+     D      +N + N ++ +SIE E+
Sbjct: 197 KTLIDTLQAAGMGPRRIMSALIKEYGGISKVGFTEVD-----CRNYMRNNRQ-KSIEGEI 250

[Close]
BLAST of Cucsat.G13169 vs. ExPASy Swiss-Prot
Match: Q3EBQ3 (Protein FAR1-RELATED SEQUENCE 2 OS=Arabidopsis thaliana OX=3702 GN=FRS2 PE=1 SV=1)

HSP 1 Score: 81.6 bits (200), Expect = 9.5e-15
Identity = 54/155 (34.84%), Postives = 88/155 (56.77%), Query Frame = 0 

Query: 1   MEFESEDAAKIFYDKYARQLGFVMRVMSCRRSEKDGRILARRLGCNKEGHCVSIRGKFGA 60
           M+FES++AA  FY +YAR +GF + + + RRS++ G+ +  ++ C++ G   + R K  A
Sbjct: 42  MDFESKEAAYYFYREYARSVGFGITIKASRRSKRSGKFIDVKIACSRFG---TKREKATA 101

Query: 61  VRKPRPSTREGCKAMIHVKYDKSGKWVITKFVKEHNHPLVVSPREARQTMDEKDKQIQEL 120
           +  PR   + GCKA +H+K  +  KWVI  FVKEHNH   + P +   ++  K+K    L
Sbjct: 102 I-NPRSCPKTGCKAGLHMKRKEDEKWVIYNFVKEHNHE--ICPDDFYVSVRGKNKPAGAL 161

Query: 121 TIELRNKKRLCSTYQEQLAAFMKIVEEHTDQLSKK 156
            I    KK L    +E+    +K++ EH  ++  K
Sbjct: 162 AI----KKGLQLALEEE---DLKLLLEHFMEMQDK 183

[Close]
BLAST of Cucsat.G13169 vs. ExPASy Swiss-Prot
Match: Q6NQJ7 (Protein FAR1-RELATED SEQUENCE 4 OS=Arabidopsis thaliana OX=3702 GN=FRS4 PE=2 SV=2)

HSP 1 Score: 75.1 bits (183), Expect = 8.9e-13
Identity = 47/142 (33.10%), Postives = 71/142 (50.00%), Query Frame = 0 

Query: 1   MEFESEDAAKIFYDKYARQLGFVMRVMSCRRSEKDGRILARRLGCNKEGHCVSIRGKFGA 60
           MEFE+ + A +FY  YA+ +GF    +S RRS      +  +  C + G     + +   
Sbjct: 1   MEFETHEDAYLFYKDYAKSVGFGTAKLSSRRSRASKEFIDAKFSCIRYGS----KQQSDD 60

Query: 61  VRKPRPSTREGCKAMIHVKYDKSGKWVITKFVKEHNHPLVVSPREARQTMDEKDKQ-IQE 120
              PR S + GCKA +HVK    GKW +  FVKEHNH L+  P +A      ++ + ++ 
Sbjct: 61  AINPRASPKIGCKASMHVKRRPDGKWYVYSFVKEHNHDLL--PEQAHYFRSHRNTELVKS 120

Query: 121 LTIELRNKKRLCSTYQEQLAAF 142
               LR KK    T  + L+A+
Sbjct: 121 NDSRLRRKKNTPLTDCKHLSAY 136

[Close]
BLAST of Cucsat.G13169 vs. ExPASy Swiss-Prot
Match: Q9SWG3 (Protein FAR-RED IMPAIRED RESPONSE 1 OS=Arabidopsis thaliana OX=3702 GN=FAR1 PE=1 SV=1)

HSP 1 Score: 73.2 bits (178), Expect = 3.4e-12
Identity = 34/100 (34.00%), Postives = 57/100 (57.00%), Query Frame = 0 

Query: 1   MEFESEDAAKIFYDKYARQLGFVMRVMSCRRSEKDGRILARRLGCNKEGHCVSIRGKFGA 60
           ++F++ +AA IFY +YA+ +GF   + + RRS+K    +  +  C++ G         G+
Sbjct: 55  IDFDTHEAAYIFYQEYAKSMGFTTSIKNSRRSKKTKDFIDAKFACSRYGVTPESESS-GS 114

Query: 61  VRKPRPSTREGCKAMIHVKYDKSGKWVITKFVKEHNHPLV 101
             +     +  CKA +HVK    GKW+I +FVK+HNH L+
Sbjct: 115 SSRRSTVKKTDCKASMHVKRRPDGKWIIHEFVKDHNHELL 153

[Close]
BLAST of Cucsat.G13169 vs. ExPASy Swiss-Prot
Match: Q9LIE5 (Protein FAR-RED ELONGATED HYPOCOTYL 3 OS=Arabidopsis thaliana OX=3702 GN=FHY3 PE=1 SV=1)

HSP 1 Score: 70.5 bits (171), Expect = 2.2e-11
Identity = 42/121 (34.71%), Postives = 57/121 (47.11%), Query Frame = 0 

Query: 1   MEFESEDAAKIFYDKYARQLGFVMRVMSCRRSEKDGRILARRLGCNKEGHCVSIRGKFGA 60
           MEFES   A  FY +Y+R +GF   + + RRS+     +  +  C++ G        F  
Sbjct: 74  MEFESHGEAYSFYQEYSRAMGFNTAIQNSRRSKTTREFIDAKFACSRYGTKREYDKSFNR 133

Query: 61  VR----KPRPSTREG--------CKAMIHVKYDKSGKWVITKFVKEHNHPLVVSPREARQ 110
            R    K  P    G        CKA +HVK    GKWVI  FV+EHNH L+ +   + Q
Sbjct: 134 PRARQSKQDPENMAGRRTCAKTDCKASMHVKRRPDGKWVIHSFVREHNHELLPAQAVSEQ 193

[Close]
BLAST of Cucsat.G13169 vs. NCBI nr
Match: XP_004136586.3 (protein FAR1-RELATED SEQUENCE 5 [Cucumis sativus] >XP_011652117.2 protein FAR1-RELATED SEQUENCE 5 [Cucumis sativus])

HSP 1 Score: 349 bits (896), Expect = 1.75e-120
Identity = 177/177 (100.00%), Postives = 177/177 (100.00%), Query Frame = 0 

Query: 1   MEFESEDAAKIFYDKYARQLGFVMRVMSCRRSEKDGRILARRLGCNKEGHCVSIRGKFGA 60
           MEFESEDAAKIFYDKYARQLGFVMRVMSCRRSEKDGRILARRLGCNKEGHCVSIRGKFGA
Sbjct: 51  MEFESEDAAKIFYDKYARQLGFVMRVMSCRRSEKDGRILARRLGCNKEGHCVSIRGKFGA 110

Query: 61  VRKPRPSTREGCKAMIHVKYDKSGKWVITKFVKEHNHPLVVSPREARQTMDEKDKQIQEL 120
           VRKPRPSTREGCKAMIHVKYDKSGKWVITKFVKEHNHPLVVSPREARQTMDEKDKQIQEL
Sbjct: 111 VRKPRPSTREGCKAMIHVKYDKSGKWVITKFVKEHNHPLVVSPREARQTMDEKDKQIQEL 170

Query: 121 TIELRNKKRLCSTYQEQLAAFMKIVEEHTDQLSKKVQNVVTNLKEFESIEQELLHPR 177
           TIELRNKKRLCSTYQEQLAAFMKIVEEHTDQLSKKVQNVVTNLKEFESIEQELLHPR
Sbjct: 171 TIELRNKKRLCSTYQEQLAAFMKIVEEHTDQLSKKVQNVVTNLKEFESIEQELLHPR 227

[Close]
BLAST of Cucsat.G13169 vs. NCBI nr
Match: XP_022983098.1 (protein FAR1-RELATED SEQUENCE 5-like isoform X3 [Cucurbita maxima] >XP_023526124.1 protein FAR1-RELATED SEQUENCE 5-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 345 bits (884), Expect = 2.03e-119
Identity = 174/177 (98.31%), Postives = 177/177 (100.00%), Query Frame = 0 

Query: 1   MEFESEDAAKIFYDKYARQLGFVMRVMSCRRSEKDGRILARRLGCNKEGHCVSIRGKFGA 60
           MEFESEDAAKIFYDKYARQ+GFVMRVMSCRRSEKDGRILARRLGCNKEG+CVSIRGKFGA
Sbjct: 1   MEFESEDAAKIFYDKYARQVGFVMRVMSCRRSEKDGRILARRLGCNKEGYCVSIRGKFGA 60

Query: 61  VRKPRPSTREGCKAMIHVKYDKSGKWVITKFVKEHNHPLVVSPREARQTMDEKDKQIQEL 120
           VRKPRPSTREGCKAMIHVKYDKSGKWVITKFVKEHNHPLVVSPREARQTMDEKDKQIQEL
Sbjct: 61  VRKPRPSTREGCKAMIHVKYDKSGKWVITKFVKEHNHPLVVSPREARQTMDEKDKQIQEL 120

Query: 121 TIELRNKKRLCSTYQEQLAAFMKIVEEHTDQLSKKVQNVVTNLKEFESIEQELLHPR 177
           TIELRNKKRLCSTYQEQLAAFMKIVEEHTDQLS+KVQNVVTNLKEFESIEQELLHPR
Sbjct: 121 TIELRNKKRLCSTYQEQLAAFMKIVEEHTDQLSRKVQNVVTNLKEFESIEQELLHPR 177

[Close]
BLAST of Cucsat.G13169 vs. NCBI nr
Match: XP_023526121.1 (protein FAR1-RELATED SEQUENCE 5-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_023526122.1 protein FAR1-RELATED SEQUENCE 5-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_023526123.1 protein FAR1-RELATED SEQUENCE 5-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 345 bits (884), Expect = 1.18e-118
Identity = 174/177 (98.31%), Postives = 177/177 (100.00%), Query Frame = 0 

Query: 1   MEFESEDAAKIFYDKYARQLGFVMRVMSCRRSEKDGRILARRLGCNKEGHCVSIRGKFGA 60
           MEFESEDAAKIFYDKYARQ+GFVMRVMSCRRSEKDGRILARRLGCNKEG+CVSIRGKFGA
Sbjct: 51  MEFESEDAAKIFYDKYARQVGFVMRVMSCRRSEKDGRILARRLGCNKEGYCVSIRGKFGA 110

Query: 61  VRKPRPSTREGCKAMIHVKYDKSGKWVITKFVKEHNHPLVVSPREARQTMDEKDKQIQEL 120
           VRKPRPSTREGCKAMIHVKYDKSGKWVITKFVKEHNHPLVVSPREARQTMDEKDKQIQEL
Sbjct: 111 VRKPRPSTREGCKAMIHVKYDKSGKWVITKFVKEHNHPLVVSPREARQTMDEKDKQIQEL 170

Query: 121 TIELRNKKRLCSTYQEQLAAFMKIVEEHTDQLSKKVQNVVTNLKEFESIEQELLHPR 177
           TIELRNKKRLCSTYQEQLAAFMKIVEEHTDQLS+KVQNVVTNLKEFESIEQELLHPR
Sbjct: 171 TIELRNKKRLCSTYQEQLAAFMKIVEEHTDQLSRKVQNVVTNLKEFESIEQELLHPR 227

[Close]
BLAST of Cucsat.G13169 vs. NCBI nr
Match: XP_022983097.1 (protein FAR1-RELATED SEQUENCE 5-like isoform X2 [Cucurbita maxima])

HSP 1 Score: 345 bits (884), Expect = 1.18e-118
Identity = 174/177 (98.31%), Postives = 177/177 (100.00%), Query Frame = 0 

Query: 1   MEFESEDAAKIFYDKYARQLGFVMRVMSCRRSEKDGRILARRLGCNKEGHCVSIRGKFGA 60
           MEFESEDAAKIFYDKYARQ+GFVMRVMSCRRSEKDGRILARRLGCNKEG+CVSIRGKFGA
Sbjct: 51  MEFESEDAAKIFYDKYARQVGFVMRVMSCRRSEKDGRILARRLGCNKEGYCVSIRGKFGA 110

Query: 61  VRKPRPSTREGCKAMIHVKYDKSGKWVITKFVKEHNHPLVVSPREARQTMDEKDKQIQEL 120
           VRKPRPSTREGCKAMIHVKYDKSGKWVITKFVKEHNHPLVVSPREARQTMDEKDKQIQEL
Sbjct: 111 VRKPRPSTREGCKAMIHVKYDKSGKWVITKFVKEHNHPLVVSPREARQTMDEKDKQIQEL 170

Query: 121 TIELRNKKRLCSTYQEQLAAFMKIVEEHTDQLSKKVQNVVTNLKEFESIEQELLHPR 177
           TIELRNKKRLCSTYQEQLAAFMKIVEEHTDQLS+KVQNVVTNLKEFESIEQELLHPR
Sbjct: 171 TIELRNKKRLCSTYQEQLAAFMKIVEEHTDQLSRKVQNVVTNLKEFESIEQELLHPR 227

[Close]
BLAST of Cucsat.G13169 vs. NCBI nr
Match: XP_022983095.1 (protein FAR1-RELATED SEQUENCE 5-like isoform X1 [Cucurbita maxima] >XP_022983096.1 protein FAR1-RELATED SEQUENCE 5-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 345 bits (884), Expect = 1.41e-118
Identity = 174/177 (98.31%), Postives = 177/177 (100.00%), Query Frame = 0 

Query: 1   MEFESEDAAKIFYDKYARQLGFVMRVMSCRRSEKDGRILARRLGCNKEGHCVSIRGKFGA 60
           MEFESEDAAKIFYDKYARQ+GFVMRVMSCRRSEKDGRILARRLGCNKEG+CVSIRGKFGA
Sbjct: 56  MEFESEDAAKIFYDKYARQVGFVMRVMSCRRSEKDGRILARRLGCNKEGYCVSIRGKFGA 115

Query: 61  VRKPRPSTREGCKAMIHVKYDKSGKWVITKFVKEHNHPLVVSPREARQTMDEKDKQIQEL 120
           VRKPRPSTREGCKAMIHVKYDKSGKWVITKFVKEHNHPLVVSPREARQTMDEKDKQIQEL
Sbjct: 116 VRKPRPSTREGCKAMIHVKYDKSGKWVITKFVKEHNHPLVVSPREARQTMDEKDKQIQEL 175

Query: 121 TIELRNKKRLCSTYQEQLAAFMKIVEEHTDQLSKKVQNVVTNLKEFESIEQELLHPR 177
           TIELRNKKRLCSTYQEQLAAFMKIVEEHTDQLS+KVQNVVTNLKEFESIEQELLHPR
Sbjct: 176 TIELRNKKRLCSTYQEQLAAFMKIVEEHTDQLSRKVQNVVTNLKEFESIEQELLHPR 232

[Close]
BLAST of Cucsat.G13169 vs. ExPASy TrEMBL
Match: A0A0A0LBE0 (FAR1 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G811580 PE=4 SV=1)

HSP 1 Score: 349 bits (896), Expect = 5.98e-120
Identity = 177/177 (100.00%), Postives = 177/177 (100.00%), Query Frame = 0 

Query: 1   MEFESEDAAKIFYDKYARQLGFVMRVMSCRRSEKDGRILARRLGCNKEGHCVSIRGKFGA 60
           MEFESEDAAKIFYDKYARQLGFVMRVMSCRRSEKDGRILARRLGCNKEGHCVSIRGKFGA
Sbjct: 107 MEFESEDAAKIFYDKYARQLGFVMRVMSCRRSEKDGRILARRLGCNKEGHCVSIRGKFGA 166

Query: 61  VRKPRPSTREGCKAMIHVKYDKSGKWVITKFVKEHNHPLVVSPREARQTMDEKDKQIQEL 120
           VRKPRPSTREGCKAMIHVKYDKSGKWVITKFVKEHNHPLVVSPREARQTMDEKDKQIQEL
Sbjct: 167 VRKPRPSTREGCKAMIHVKYDKSGKWVITKFVKEHNHPLVVSPREARQTMDEKDKQIQEL 226

Query: 121 TIELRNKKRLCSTYQEQLAAFMKIVEEHTDQLSKKVQNVVTNLKEFESIEQELLHPR 177
           TIELRNKKRLCSTYQEQLAAFMKIVEEHTDQLSKKVQNVVTNLKEFESIEQELLHPR
Sbjct: 227 TIELRNKKRLCSTYQEQLAAFMKIVEEHTDQLSKKVQNVVTNLKEFESIEQELLHPR 283

[Close]
BLAST of Cucsat.G13169 vs. ExPASy TrEMBL
Match: A0A6J1J6T2 (protein FAR1-RELATED SEQUENCE 5-like isoform X3 OS=Cucurbita maxima OX=3661 GN=LOC111481745 PE=4 SV=1)

HSP 1 Score: 345 bits (884), Expect = 9.84e-120
Identity = 174/177 (98.31%), Postives = 177/177 (100.00%), Query Frame = 0 

Query: 1   MEFESEDAAKIFYDKYARQLGFVMRVMSCRRSEKDGRILARRLGCNKEGHCVSIRGKFGA 60
           MEFESEDAAKIFYDKYARQ+GFVMRVMSCRRSEKDGRILARRLGCNKEG+CVSIRGKFGA
Sbjct: 1   MEFESEDAAKIFYDKYARQVGFVMRVMSCRRSEKDGRILARRLGCNKEGYCVSIRGKFGA 60

Query: 61  VRKPRPSTREGCKAMIHVKYDKSGKWVITKFVKEHNHPLVVSPREARQTMDEKDKQIQEL 120
           VRKPRPSTREGCKAMIHVKYDKSGKWVITKFVKEHNHPLVVSPREARQTMDEKDKQIQEL
Sbjct: 61  VRKPRPSTREGCKAMIHVKYDKSGKWVITKFVKEHNHPLVVSPREARQTMDEKDKQIQEL 120

Query: 121 TIELRNKKRLCSTYQEQLAAFMKIVEEHTDQLSKKVQNVVTNLKEFESIEQELLHPR 177
           TIELRNKKRLCSTYQEQLAAFMKIVEEHTDQLS+KVQNVVTNLKEFESIEQELLHPR
Sbjct: 121 TIELRNKKRLCSTYQEQLAAFMKIVEEHTDQLSRKVQNVVTNLKEFESIEQELLHPR 177

[Close]
BLAST of Cucsat.G13169 vs. ExPASy TrEMBL
Match: A0A6J1IYB6 (protein FAR1-RELATED SEQUENCE 5-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111481745 PE=4 SV=1)

HSP 1 Score: 345 bits (884), Expect = 5.71e-119
Identity = 174/177 (98.31%), Postives = 177/177 (100.00%), Query Frame = 0 

Query: 1   MEFESEDAAKIFYDKYARQLGFVMRVMSCRRSEKDGRILARRLGCNKEGHCVSIRGKFGA 60
           MEFESEDAAKIFYDKYARQ+GFVMRVMSCRRSEKDGRILARRLGCNKEG+CVSIRGKFGA
Sbjct: 51  MEFESEDAAKIFYDKYARQVGFVMRVMSCRRSEKDGRILARRLGCNKEGYCVSIRGKFGA 110

Query: 61  VRKPRPSTREGCKAMIHVKYDKSGKWVITKFVKEHNHPLVVSPREARQTMDEKDKQIQEL 120
           VRKPRPSTREGCKAMIHVKYDKSGKWVITKFVKEHNHPLVVSPREARQTMDEKDKQIQEL
Sbjct: 111 VRKPRPSTREGCKAMIHVKYDKSGKWVITKFVKEHNHPLVVSPREARQTMDEKDKQIQEL 170

Query: 121 TIELRNKKRLCSTYQEQLAAFMKIVEEHTDQLSKKVQNVVTNLKEFESIEQELLHPR 177
           TIELRNKKRLCSTYQEQLAAFMKIVEEHTDQLS+KVQNVVTNLKEFESIEQELLHPR
Sbjct: 171 TIELRNKKRLCSTYQEQLAAFMKIVEEHTDQLSRKVQNVVTNLKEFESIEQELLHPR 227

[Close]
BLAST of Cucsat.G13169 vs. ExPASy TrEMBL
Match: A0A6J1J157 (protein FAR1-RELATED SEQUENCE 5-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111481745 PE=4 SV=1)

HSP 1 Score: 345 bits (884), Expect = 6.81e-119
Identity = 174/177 (98.31%), Postives = 177/177 (100.00%), Query Frame = 0 

Query: 1   MEFESEDAAKIFYDKYARQLGFVMRVMSCRRSEKDGRILARRLGCNKEGHCVSIRGKFGA 60
           MEFESEDAAKIFYDKYARQ+GFVMRVMSCRRSEKDGRILARRLGCNKEG+CVSIRGKFGA
Sbjct: 56  MEFESEDAAKIFYDKYARQVGFVMRVMSCRRSEKDGRILARRLGCNKEGYCVSIRGKFGA 115

Query: 61  VRKPRPSTREGCKAMIHVKYDKSGKWVITKFVKEHNHPLVVSPREARQTMDEKDKQIQEL 120
           VRKPRPSTREGCKAMIHVKYDKSGKWVITKFVKEHNHPLVVSPREARQTMDEKDKQIQEL
Sbjct: 116 VRKPRPSTREGCKAMIHVKYDKSGKWVITKFVKEHNHPLVVSPREARQTMDEKDKQIQEL 175

Query: 121 TIELRNKKRLCSTYQEQLAAFMKIVEEHTDQLSKKVQNVVTNLKEFESIEQELLHPR 177
           TIELRNKKRLCSTYQEQLAAFMKIVEEHTDQLS+KVQNVVTNLKEFESIEQELLHPR
Sbjct: 176 TIELRNKKRLCSTYQEQLAAFMKIVEEHTDQLSRKVQNVVTNLKEFESIEQELLHPR 232

[Close]
BLAST of Cucsat.G13169 vs. ExPASy TrEMBL
Match: A0A6J1F658 (protein FAR1-RELATED SEQUENCE 5-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111442478 PE=4 SV=1)

HSP 1 Score: 342 bits (878), Expect = 8.09e-119
Identity = 173/177 (97.74%), Postives = 176/177 (99.44%), Query Frame = 0 

Query: 1   MEFESEDAAKIFYDKYARQLGFVMRVMSCRRSEKDGRILARRLGCNKEGHCVSIRGKFGA 60
           MEFESEDAAKIFYDKYARQ+GFVMRVMSCRRSEKDGRILARRLGCNKEG+CVSIRGKFGA
Sbjct: 1   MEFESEDAAKIFYDKYARQVGFVMRVMSCRRSEKDGRILARRLGCNKEGYCVSIRGKFGA 60

Query: 61  VRKPRPSTREGCKAMIHVKYDKSGKWVITKFVKEHNHPLVVSPREARQTMDEKDKQIQEL 120
           VRKPRPSTREGCKAMIHVKYDK GKWVITKFVKEHNHPLVVSPREARQTMDEKDKQIQEL
Sbjct: 61  VRKPRPSTREGCKAMIHVKYDKFGKWVITKFVKEHNHPLVVSPREARQTMDEKDKQIQEL 120

Query: 121 TIELRNKKRLCSTYQEQLAAFMKIVEEHTDQLSKKVQNVVTNLKEFESIEQELLHPR 177
           TIELRNKKRLCSTYQEQLAAFMKIVEEHTDQLS+KVQNVVTNLKEFESIEQELLHPR
Sbjct: 121 TIELRNKKRLCSTYQEQLAAFMKIVEEHTDQLSRKVQNVVTNLKEFESIEQELLHPR 177

The following BLAST results are available for this feature:
BLAST of Cucsat.G13169 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9SZL83.1e-2137.78Protein FAR1-RELATED SEQUENCE 5 OS=Arabidopsis thaliana OX=3702 GN=FRS5 PE=1 SV=... [more]
Q3EBQ39.5e-1534.84Protein FAR1-RELATED SEQUENCE 2 OS=Arabidopsis thaliana OX=3702 GN=FRS2 PE=1 SV=... [more]
Q6NQJ78.9e-1333.10Protein FAR1-RELATED SEQUENCE 4 OS=Arabidopsis thaliana OX=3702 GN=FRS4 PE=2 SV=... [more]
Q9SWG33.4e-1234.00Protein FAR-RED IMPAIRED RESPONSE 1 OS=Arabidopsis thaliana OX=3702 GN=FAR1 PE=1... [more]
Q9LIE52.2e-1134.71Protein FAR-RED ELONGATED HYPOCOTYL 3 OS=Arabidopsis thaliana OX=3702 GN=FHY3 PE... [more]
BLAST of Cucsat.G13169 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004136586.31.75e-120100.00protein FAR1-RELATED SEQUENCE 5 [Cucumis sativus] >XP_011652117.2 protein FAR1-R... [more]
XP_022983098.12.03e-11998.31protein FAR1-RELATED SEQUENCE 5-like isoform X3 [Cucurbita maxima] >XP_023526124... [more]
XP_023526121.11.18e-11898.31protein FAR1-RELATED SEQUENCE 5-like isoform X1 [Cucurbita pepo subsp. pepo] >XP... [more]
XP_022983097.11.18e-11898.31protein FAR1-RELATED SEQUENCE 5-like isoform X2 [Cucurbita maxima][more]
XP_022983095.11.41e-11898.31protein FAR1-RELATED SEQUENCE 5-like isoform X1 [Cucurbita maxima] >XP_022983096... [more]
BLAST of Cucsat.G13169 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LBE05.98e-120100.00FAR1 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G811580 PE=4 S... [more]
A0A6J1J6T29.84e-12098.31protein FAR1-RELATED SEQUENCE 5-like isoform X3 OS=Cucurbita maxima OX=3661 GN=L... [more]
A0A6J1IYB65.71e-11998.31protein FAR1-RELATED SEQUENCE 5-like isoform X2 OS=Cucurbita maxima OX=3661 GN=L... [more]
A0A6J1J1576.81e-11998.31protein FAR1-RELATED SEQUENCE 5-like isoform X1 OS=Cucurbita maxima OX=3661 GN=L... [more]
A0A6J1F6588.09e-11997.74protein FAR1-RELATED SEQUENCE 5-like isoform X2 OS=Cucurbita moschata OX=3662 GN... [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004330FAR1 DNA binding domainPFAMPF03101FAR1coord: 110..198
e-value: 1.8E-28
score: 99.1
NoneNo IPR availablePANTHERPTHR46328:SF17FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEINcoord: 61..208
NoneNo IPR availablePANTHERPTHR46328FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATEDcoord: 61..208

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cucsat.G13169.T1Cucsat.G13169.T1mRNA
Cucsat.G13169.T8Cucsat.G13169.T8mRNA
Cucsat.G13169.T6Cucsat.G13169.T6mRNA
Cucsat.G13169.T2Cucsat.G13169.T2mRNA
Cucsat.G13169.T9Cucsat.G13169.T9mRNA
Cucsat.G13169.T14Cucsat.G13169.T14mRNA
Cucsat.G13169.T15Cucsat.G13169.T15mRNA
Cucsat.G13169.T10Cucsat.G13169.T10mRNA
Cucsat.G13169.T22Cucsat.G13169.T22mRNA
Cucsat.G13169.T20Cucsat.G13169.T20mRNA
Cucsat.G13169.T5Cucsat.G13169.T5mRNA
Cucsat.G13169.T7Cucsat.G13169.T7mRNA
Cucsat.G13169.T3Cucsat.G13169.T3mRNA
Cucsat.G13169.T16Cucsat.G13169.T16mRNA
Cucsat.G13169.T11Cucsat.G13169.T11mRNA
Cucsat.G13169.T12Cucsat.G13169.T12mRNA
Cucsat.G13169.T4Cucsat.G13169.T4mRNA
Cucsat.G13169.T24Cucsat.G13169.T24mRNA
Cucsat.G13169.T21Cucsat.G13169.T21mRNA
Cucsat.G13169.T17Cucsat.G13169.T17mRNA
Cucsat.G13169.T18Cucsat.G13169.T18mRNA