Cucsat.G13169.T17 (mRNA) Cucumber (B10) v3

Overview


Name	Cucsat.G13169.T17
Type	mRNA
Organism	Cucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description	protein FAR1-RELATED SEQUENCE 5
Location	ctg1838: 1495797 .. 1499409 (+)
RNA-Seq Expression	Cucsat.G13169.T17
Synteny	Cucsat.G13169.T17

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

CTTCTTCTTCTTTTCCTCTTTTCCAAATTCTTGGCGTTCCAGTTTTAAGTTATGATAAGAAGATAATTGAATTGATTACGCTTGAAAACTCTATTCTTCCTCTGGGTTTCATTTTTTATTGCAAATTCAATTGTTGTTTCTGTTTACTTAACACAGACACCGAATTTTGCTTTACAGAGTCGACTCTAGTTTCCCATTTCAGGACTTGGGTTTGCCGCCATTTTTTGTTTTTGATGATCTGAATTAGGAAATGGGGTATTTATATTTGATGTTTTATGTCAGTTTTTCGCTGTGTCTCTTCCATTGCTGATGGATTTTCCCTTTTTTCCCTCTTTCCTACCCTGTTAATTCAGTCGAGAGGGATTTTTTTTTCATATGCTTTTAGAAATCAATGTGTGATCATCATCTTTCTTTTTTCCACTTTCTTCCTGAGTGATTTAGTTATAAATATTGATAACTTTCAGATGGATTTGAGAGATAATAGTGAAAGATGTCTTCTGGCAGTGGACGCAGACGAGGGAGAGGAAGGGATAGAGGGAGGATCATTAGAGAGTCCAGCGGGAACAGAATTAAATGATTGTGATGGAGATATTATTCTTGAGCCTTATGAGGGAATGGAATTTGAATCGGAAGATGCTGCCAAGATTTTCTATGATAAGTATGCTCGTCAACTGGGATTTGTTATGCGTGTGATGTCCTGTCGTCGTTCTGAAAAAGATGGGCGAATACTTGCTCGAAGACTTGGATGCAACAAAGAGGGACATTGTGTCAGCATCCGAGGTAAATTTGGGGCAGTTCGGAAGCCACGGCCGAGTACACGAGAAGGCTGTAAGGCAATGATTCATGTCAAATATGATAAGTCTGGGAAATGGGTGATTACAAAATTTGTAAAGGAACATAATCATCCTCTTGTGGTTTCTCCTCGTGAAGCTCGGCAGACCATGGTCAGTATTTCTCTTCCCCTATTGTTATCTTCAATCAAACATAATACTTTAGAATAAAACTGTGTTCTTTACTTTTTAAGGGAGATGGAAGTAAAAACATCTTTGCCTCTTCACCCCTCAACTGCTTTGTAGGGTATCTATAAAAATTCAAAGATTATGTATATTTACTGTAGTTGTTACCTTGCTTTTAGGGAGAAACCTCTAGTTTCATCAATAAATTGTTGGAGATTAAAATGGTTTTTTTCTGATCGAAGGACATTAATTTTCTCTATCGGAAGCAAGTATACTAAAGAAGCGGCAAAATTTTATAAGACCAATTTTTAGCATGAAGAATTGTTGATCGTGCATAATGTTTATATTAGTCCTAGTATTAAAATGAATGGATTGTTAAAGAAAGGAAAACAAAGATGAATTTATGAAGTTTATCCAAAAACAATTTTGTCACTTCGCACATTAAAACCACAATTTTCTCGTTCTGCATATTATCTAATCACTATGTCACAGTAAGTTTTACTTTTAGCAAAGCAACTGAACTATTGTTTGCATATTTTATTGACGCATATGCCACTGCTAACCTCTTTAAGTTCGAGTATGGGTTTAACAATAATTTTAGTTTTGTTAGGAGGAAGCTTGGCCTTTTAACTGACTAATATGAATACATCTATTAAATAAAACTGACCTGACCATGATTAGTTCAGCCAGTTAAGGAGAAAAATTGAACGTCCACTTTGGAGTTTGGTAGGGTGCTTGGGTTTGGCGAAGCAAAAGTTATATAGGCAATATACTTGCTAACTCATTTGGATGAAATATGAATTAAGGAGAAGCAAATAACATGCTTATTCCCTTAGAAGTGCTAATATAGACTATGGGGTGTGTTGTTTTGTTGGGTCTTTCGAGAGAGAAACAAAAGAACCTTTCAAAGCTTAGAAAGAGGTCCTTATGATGTTCAGTCTCTTGCTAGGTCCGATGTTTTTATTTGGGTGTAGGCGAAGAAACCTTTTTGTAACAGTAAGTTGGGTCTTATTTTCTAGATTGGAGATCCTTCTTCCTTTAATGGAAAATTCTCGCTTTTGAGCGTGTTTTCTGGATGCTCTTGTGTTCGTTCATTCTTTCTTAATGAATGTTCAGTTCTTTAAAAAAACGTGTGTAAATATATGATATATGTACATATACAAATATATAGACTAAATATGGTTTGGTCCTGTCTGGTATTTTGTTATGAAATTCTTTAGGATGACGCTCCTTCCTTGCTTCTATATTGTGGAACAAAATACAACGAGCGGATTCTCCTTGAGACTGTCCCCCCTAAGCCAACTTGTTCTCCATTTCCGAACTTCCTACATCTTGTCTCTTCTGATTTTTGTTCGAGCTTTTTGGAGTGTAGTAACCAGATAGCTGCACACACACATGACCAGATGACAAATGAATATAACTATTCAGTCTCAATACTGATGGCTATACTGATATAATTACTAAGATTTGGGAAAAGTACAGTTGTTCGTACATACTAACTTGAGCTTCATACCTTCCAGGCATGTCTTTCCCTTTTCAACCACCAATCGGTATATGTTACCTAGCCTTCTTGTTCTATAGGTGAATTTCATCGATTTTTTAGAACATAACATGTTTTGATACTTTCGTTTGTGATGCCTTACGTGATTGTCTGCATTTTCACCTCTATCTTAATGGTTGGAGCCATGATGATCACCCACCTAGCATATTAGTTGCTCGTGAATATTCTACTATACCATTCGTAGTTTGGGAAACTAGTAAACTGACGAGAGATTTGAAACTTAACAACAACAAAAAAAATCTTTAACTGCAATTACAGAAGAAGAATGAATTGTATGTTCATAGCTAAATCTTTCTGTGGGTGATTGACATATAACTATAGTATTGCATCATGATGAAAAATCATTGATTTTGAACTTTCCTTGCAGGATGAAAAAGACAAGCAAATACAGGAACTCACTATAGAGCTGCGGAATAAGAAACGGTTATGTTCGACATACCAAGAACAGCTTGCTGCATTTATGAAAATTGTTGAAGAACATACCGACCAATTATCAAAAAAAGTTCAAAATGTAGTTACCAACCTTAAAGAATTTGAGTCCATTGAGCAAGAACTATTGCATCCTAGGTAGCCTAGCCATTGAGTGAGTATCTGATTGCTATTTAACCCTTCTCCTTCATTTTGAGATTTTTGTTCACTTCATCAAAAAGTATTCATTATGTCATTAAATACAACTAGCTTCTTATGCAGTGTGGTCGGTGGCCATCGATATTTGGAGGTTGGTAGCAGACAAAGAACAATGAGAACCCTTGAGAAAGCCCCTCAAAAGGCATTCTTTACAGTCTACCCTGCCCCACTCCAAACTCAGAGGGAGCTATAGAAATGAGCAATGCAATATTTGTTGTGTGTATCATAGCAAGCAGTGGCACGAAGTTGAAGTACGTGGAGAACATCTGAGCGGAGGGAAAGTTTTGAATGAAGAGACGATTTTATTTACCTCTCTAAGTGAATAACCAATGCAGATTTTTTTAGAAATTTTGCTGAAATTTTATTTGCTTTGTGTATATGTTTGCATCTGATACTGCAAGCAGAACCATCCAAATCCCATCCTGGATGCCCACAGAGCTATAATGAGAAAATCAATATTAGAATTGTT

Coding sequence (CDS)

ATGTCAGTTTTTCGCTGTGTCTCTTCCATTGCTGATGGATTTTCCCTTTTTTCCCTCTTTCCTACCCTGTTAATTCAGTCGAGAGGGATTTTTTTTTCATATGCTTTTAGAAATCAATGTGTGATCATCATCTTTCTTTTTTCCACTTTCTTCCTGAGTGATTTAGTTATAAATATTGATAACTTTCAGATGGATTTGAGAGATAATAGTGAAAGATGTCTTCTGGCAGTGGACGCAGACGAGGGAGAGGAAGGGATAGAGGGAGGATCATTAGAGAGTCCAGCGGGAACAGAATTAAATGATTGTGATGGAGATATTATTCTTGAGCCTTATGAGGGAATGGAATTTGAATCGGAAGATGCTGCCAAGATTTTCTATGATAAGTATGCTCGTCAACTGGGATTTGTTATGCGTGTGATGTCCTGTCGTCGTTCTGAAAAAGATGGGCGAATACTTGCTCGAAGACTTGGATGCAACAAAGAGGGACATTGTGTCAGCATCCGAGGTAAATTTGGGGCAGTTCGGAAGCCACGGCCGAGTACACGAGAAGGCTGTAAGGCAATGATTCATGTCAAATATGATAAGTCTGGGAAATGGGTGATTACAAAATTTGTAAAGGAACATAATCATCCTCTTGTGGTTTCTCCTCGTGAAGCTCGGCAGACCATGGATGACGCTCCTTCCTTGCTTCTATATTGTGGAACAAAATACAACGAGCGGATTCTCCTTGAGACTGTCCCCCCTAAGCCAACTTGTTCTCCATTTCCGAACTTCCTACATCTTGTCTCTTCTGATTTTTGTTCGAGCTTTTTGGAGTGTAGTAACCAGATAGCTGCACACACACATGACCAGATGACAAATGAATATAACTATTCAGTCTCAATACTGATGGCTATACTGATATAA

Protein sequence

MSVFRCVSSIADGFSLFSLFPTLLIQSRGIFFSYAFRNQCVIIIFLFSTFFLSDLVINIDNFQMDLRDNSERCLLAVDADEGEEGIEGGSLESPAGTELNDCDGDIILEPYEGMEFESEDAAKIFYDKYARQLGFVMRVMSCRRSEKDGRILARRLGCNKEGHCVSIRGKFGAVRKPRPSTREGCKAMIHVKYDKSGKWVITKFVKEHNHPLVVSPREARQTMDDAPSLLLYCGTKYNERILLETVPPKPTCSPFPNFLHLVSSDFCSSFLECSNQIAAHTHDQMTNEYNYSVSILMAILI

Homology

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BLAST of Cucsat.G13169.T17 vs. ExPASy Swiss-Prot
Match: Q9SZL8 (Protein FAR1-RELATED SEQUENCE 5 OS=Arabidopsis thaliana OX=3702 GN=FRS5 PE=1 SV=1)

HSP 1 Score: 119.4 bits (298), Expect = 7.0e-26
Identity = 64/131 (48.85%), Postives = 84/131 (64.12%), Query Frame = 0


Query: 85  GIEGGSLESPAGTELNDCDGDIILEPYEGMEFESEDAAKIFYDKYARQLGFVMRVMSCRR 144
           G+ G S       E   CD  + LEPY+G+EFESE+AAK FY+ YAR++GF  RV S RR
Sbjct: 49  GLVGNSGNYFPNQEEEACD-LLDLEPYDGLEFESEEAAKAFYNSYARRIGFSTRVSSSRR 108

Query: 145 SEKDGRILARRLGCNKEG--HCVSIRGKFGAVRKPRPSTREGCKAMIHVKYDKSGKWVIT 204
           S +DG I+ R+  C KEG  +    R K   +++PR  TR GCKA + VK   SGKW+++
Sbjct: 109 SRRDGAIIQRQFVCAKEGFRNMNEKRTKDREIKRPRTITRVGCKASLSVKMQDSGKWLVS 168

Query: 205 KFVKEHNHPLV 214
            FVK+HNH LV
Sbjct: 169 GFVKDHNHELV 178

[Close]

BLAST of Cucsat.G13169.T17 vs. ExPASy Swiss-Prot
Match: Q3EBQ3 (Protein FAR1-RELATED SEQUENCE 2 OS=Arabidopsis thaliana OX=3702 GN=FRS2 PE=1 SV=1)

HSP 1 Score: 85.9 bits (211), Expect = 8.6e-16
Identity = 46/118 (38.98%), Postives = 70/118 (59.32%), Query Frame = 0


Query: 95  AGTELNDCDGDIILEPYEGMEFESEDAAKIFYDKYARQLGFVMRVMSCRRSEKDGRILAR 154
           A T  N      + E   GM+FES++AA  FY +YAR +GF + + + RRS++ G+ +  
Sbjct: 23  ASTSGNVAQCATVSELRNGMDFESKEAAYYFYREYARSVGFGITIKASRRSKRSGKFIDV 82

Query: 155 RLGCNKEGHCVSIRGKFGAVRKPRPSTREGCKAMIHVKYDKSGKWVITKFVKEHNHPL 213
           ++ C++ G   + R K  A+  PR   + GCKA +H+K  +  KWVI  FVKEHNH +
Sbjct: 83  KIACSRFG---TKREKATAI-NPRSCPKTGCKAGLHMKRKEDEKWVIYNFVKEHNHEI 136

[Close]

BLAST of Cucsat.G13169.T17 vs. ExPASy Swiss-Prot
Match: Q9SWG3 (Protein FAR-RED IMPAIRED RESPONSE 1 OS=Arabidopsis thaliana OX=3702 GN=FAR1 PE=1 SV=1)

HSP 1 Score: 85.1 bits (209), Expect = 1.5e-15
Identity = 40/110 (36.36%), Postives = 64/110 (58.18%), Query Frame = 0


Query: 104 GDIILEPYEGMEFESEDAAKIFYDKYARQLGFVMRVMSCRRSEKDGRILARRLGCNKEGH 163
           GD+ LEP  G++F++ +AA IFY +YA+ +GF   + + RRS+K    +  +  C++ G 
Sbjct: 45  GDLDLEPRNGIDFDTHEAAYIFYQEYAKSMGFTTSIKNSRRSKKTKDFIDAKFACSRYGV 104

Query: 164 CVSIRGKFGAVRKPRPSTREGCKAMIHVKYDKSGKWVITKFVKEHNHPLV 214
                   G+  +     +  CKA +HVK    GKW+I +FVK+HNH L+
Sbjct: 105 TPESESS-GSSSRRSTVKKTDCKASMHVKRRPDGKWIIHEFVKDHNHELL 153

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BLAST of Cucsat.G13169.T17 vs. ExPASy Swiss-Prot
Match: Q9LIE5 (Protein FAR-RED ELONGATED HYPOCOTYL 3 OS=Arabidopsis thaliana OX=3702 GN=FHY3 PE=1 SV=1)

HSP 1 Score: 79.0 bits (193), Expect = 1.0e-13
Identity = 50/141 (35.46%), Postives = 67/141 (47.52%), Query Frame = 0


Query: 94  PAGTELNDCDGDIILEPYEGMEFESEDAAKIFYDKYARQLGFVMRVMSCRRSEKDGRILA 153
           P G EL +    + LEP  GMEFES   A  FY +Y+R +GF   + + RRS+     + 
Sbjct: 55  PTG-ELVEYTEGMNLEPLNGMEFESHGEAYSFYQEYSRAMGFNTAIQNSRRSKTTREFID 114

Query: 154 RRLGCNKEGHCVSIRGKFGAVR----KPRPSTREG--------CKAMIHVKYDKSGKWVI 213
            +  C++ G        F   R    K  P    G        CKA +HVK    GKWVI
Sbjct: 115 AKFACSRYGTKREYDKSFNRPRARQSKQDPENMAGRRTCAKTDCKASMHVKRRPDGKWVI 174

Query: 214 TKFVKEHNHPLVVSPREARQT 223
             FV+EHNH L+ +   + QT
Sbjct: 175 HSFVREHNHELLPAQAVSEQT 194

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BLAST of Cucsat.G13169.T17 vs. ExPASy Swiss-Prot
Match: Q9ZVC9 (Protein FAR1-RELATED SEQUENCE 3 OS=Arabidopsis thaliana OX=3702 GN=FRS3 PE=1 SV=2)

HSP 1 Score: 75.1 bits (183), Expect = 1.5e-12
Identity = 47/136 (34.56%), Postives = 64/136 (47.06%), Query Frame = 0


Query: 80  DEGEEGIEGGSLESPAGTELNDCDGDIILEPYEGMEFESEDAAKIFYDKYARQLGFVMRV 139
           DEG+      S ++     L   D   I EP  GMEF SE  AK FYD+Y+RQLGF  ++
Sbjct: 19  DEGDVEPSDCSGQNNMDNSLGVQDEIGIAEPCVGMEFNSEKEAKSFYDEYSRQLGFTSKL 78

Query: 140 MSCRRSEKDGRILARRLGCNKEGHCVSIRGKFGAVRKPRPSTREGCKAMIHVKYDKSGKW 199
           +       DG +  R   C+               ++ +    E C AM+ ++     KW
Sbjct: 79  L----PRTDGSVSVREFVCSSSS------------KRSKRRLSESCDAMVRIELQGHEKW 138

Query: 200 VITKFVKEHNHPLVVS 216
           V+TKFVKEH H L  S
Sbjct: 139 VVTKFVKEHTHGLASS 138

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BLAST of Cucsat.G13169.T17 vs. NCBI nr
Match: KGN59476.2 (hypothetical protein Csa_001154 [Cucumis sativus])

HSP 1 Score: 474 bits (1221), Expect = 2.65e-165
Identity = 229/229 (100.00%), Postives = 229/229 (100.00%), Query Frame = 0


Query: 64  MDLRDNSERCLLAVDADEGEEGIEGGSLESPAGTELNDCDGDIILEPYEGMEFESEDAAK 123
           MDLRDNSERCLLAVDADEGEEGIEGGSLESPAGTELNDCDGDIILEPYEGMEFESEDAAK
Sbjct: 48  MDLRDNSERCLLAVDADEGEEGIEGGSLESPAGTELNDCDGDIILEPYEGMEFESEDAAK 107

Query: 124 IFYDKYARQLGFVMRVMSCRRSEKDGRILARRLGCNKEGHCVSIRGKFGAVRKPRPSTRE 183
           IFYDKYARQLGFVMRVMSCRRSEKDGRILARRLGCNKEGHCVSIRGKFGAVRKPRPSTRE
Sbjct: 108 IFYDKYARQLGFVMRVMSCRRSEKDGRILARRLGCNKEGHCVSIRGKFGAVRKPRPSTRE 167

Query: 184 GCKAMIHVKYDKSGKWVITKFVKEHNHPLVVSPREARQTMDDAPSLLLYCGTKYNERILL 243
           GCKAMIHVKYDKSGKWVITKFVKEHNHPLVVSPREARQTMDDAPSLLLYCGTKYNERILL
Sbjct: 168 GCKAMIHVKYDKSGKWVITKFVKEHNHPLVVSPREARQTMDDAPSLLLYCGTKYNERILL 227

Query: 244 ETVPPKPTCSPFPNFLHLVSSDFCSSFLECSNQIAAHTHDQMTNEYNYS 292
           ETVPPKPTCSPFPNFLHLVSSDFCSSFLECSNQIAAHTHDQMTNEYNYS
Sbjct: 228 ETVPPKPTCSPFPNFLHLVSSDFCSSFLECSNQIAAHTHDQMTNEYNYS 276

[Close]

BLAST of Cucsat.G13169.T17 vs. NCBI nr
Match: XP_004136586.3 (protein FAR1-RELATED SEQUENCE 5 [Cucumis sativus] >XP_011652117.2 protein FAR1-RELATED SEQUENCE 5 [Cucumis sativus])

HSP 1 Score: 332 bits (851), Expect = 1.58e-111
Identity = 172/224 (76.79%), Postives = 184/224 (82.14%), Query Frame = 0


Query: 64  MDLRDNSERCLLAVDADEGEEGIEGGSLESPAGTELNDCDGDIILEPYEGMEFESEDAAK 123
           MDLRDNSERCLLAVDADEGEEGIEGGSLESPAGTELNDCDGDIILEPYEGMEFESEDAAK
Sbjct: 1   MDLRDNSERCLLAVDADEGEEGIEGGSLESPAGTELNDCDGDIILEPYEGMEFESEDAAK 60

Query: 124 IFYDKYARQLGFVMRVMSCRRSEKDGRILARRLGCNKEGHCVSIRGKFGAVRKPRPSTRE 183
           IFYDKYARQLGFVMRVMSCRRSEKDGRILARRLGCNKEGHCVSIRGKFGAVRKPRPSTRE
Sbjct: 61  IFYDKYARQLGFVMRVMSCRRSEKDGRILARRLGCNKEGHCVSIRGKFGAVRKPRPSTRE 120

Query: 184 GCKAMIHVKYDKSGKWVITKFVKEHNHPLVVSPREARQTMDDAPSLLLYCGTKYNERILL 243
           GCKAMIHVKYDKSGKWVITKFVKEHNHPLVVSPREARQTMD+          K  + + +
Sbjct: 121 GCKAMIHVKYDKSGKWVITKFVKEHNHPLVVSPREARQTMDEKD--------KQIQELTI 180

Query: 244 ETVPPKPTCSPFPNFLHLVSSDFCSSFLECSNQIAAHTHDQMTN 287
           E    K  CS +   L    + F     E ++Q++    + +TN
Sbjct: 181 ELRNKKRLCSTYQEQL----AAFMKIVEEHTDQLSKKVQNVVTN 212

[Close]

BLAST of Cucsat.G13169.T17 vs. NCBI nr
Match: XP_008443098.1 (PREDICTED: protein FAR1-RELATED SEQUENCE 5 [Cucumis melo])

HSP 1 Score: 329 bits (843), Expect = 2.59e-110
Identity = 171/224 (76.34%), Postives = 183/224 (81.70%), Query Frame = 0


Query: 64  MDLRDNSERCLLAVDADEGEEGIEGGSLESPAGTELNDCDGDIILEPYEGMEFESEDAAK 123
           MDLRDNSERCLLAVDADEGEEGIEGGSLESPAGTELNDCDGDIILEPYEGMEFESEDAAK
Sbjct: 1   MDLRDNSERCLLAVDADEGEEGIEGGSLESPAGTELNDCDGDIILEPYEGMEFESEDAAK 60

Query: 124 IFYDKYARQLGFVMRVMSCRRSEKDGRILARRLGCNKEGHCVSIRGKFGAVRKPRPSTRE 183
           IFYDKYARQLGFVMRVMSCRRSEKDGRILARRLGCNKEGHCVSIRGKFGAVRKPRPSTRE
Sbjct: 61  IFYDKYARQLGFVMRVMSCRRSEKDGRILARRLGCNKEGHCVSIRGKFGAVRKPRPSTRE 120

Query: 184 GCKAMIHVKYDKSGKWVITKFVKEHNHPLVVSPREARQTMDDAPSLLLYCGTKYNERILL 243
           GCKAMIHVKYDKSGKWVITKFVKEHNHPLVVS REARQTMD+          K  + + +
Sbjct: 121 GCKAMIHVKYDKSGKWVITKFVKEHNHPLVVSAREARQTMDEKD--------KQIQELTI 180

Query: 244 ETVPPKPTCSPFPNFLHLVSSDFCSSFLECSNQIAAHTHDQMTN 287
           E    K  CS +   L    + F     E ++Q++    + +TN
Sbjct: 181 ELRNKKRLCSTYQEQL----AAFMKIVEEHTDQLSRKVQNVVTN 212

[Close]

BLAST of Cucsat.G13169.T17 vs. NCBI nr
Match: KAA0043703.1 (protein FAR1-RELATED SEQUENCE 5 [Cucumis melo var. makuwa] >TYK25431.1 protein FAR1-RELATED SEQUENCE 5 [Cucumis melo var. makuwa])

HSP 1 Score: 326 bits (835), Expect = 1.09e-109
Identity = 160/162 (98.77%), Postives = 160/162 (98.77%), Query Frame = 0


Query: 64  MDLRDNSERCLLAVDADEGEEGIEGGSLESPAGTELNDCDGDIILEPYEGMEFESEDAAK 123
           MDLRDNSERCLLAVDADEGEEGIEGGSLESPAGTELNDCDGDIILEPYEGMEFESEDAAK
Sbjct: 1   MDLRDNSERCLLAVDADEGEEGIEGGSLESPAGTELNDCDGDIILEPYEGMEFESEDAAK 60

Query: 124 IFYDKYARQLGFVMRVMSCRRSEKDGRILARRLGCNKEGHCVSIRGKFGAVRKPRPSTRE 183
           IFYDKYARQLGFVMRVMSCRRSEKDGRILARRLGCNKEGHCVSIRGKFGAVRKPRPSTRE
Sbjct: 61  IFYDKYARQLGFVMRVMSCRRSEKDGRILARRLGCNKEGHCVSIRGKFGAVRKPRPSTRE 120

Query: 184 GCKAMIHVKYDKSGKWVITKFVKEHNHPLVVSPREARQTMDD 225
           GCKAMIHVKYDKSGKWVITKFVKEHNHPLVVS REARQTM D
Sbjct: 121 GCKAMIHVKYDKSGKWVITKFVKEHNHPLVVSAREARQTMGD 162

[Close]

BLAST of Cucsat.G13169.T17 vs. NCBI nr
Match: XP_022154282.1 (protein FAR1-RELATED SEQUENCE 5 [Momordica charantia])

HSP 1 Score: 318 bits (815), Expect = 4.66e-106
Identity = 165/224 (73.66%), Postives = 180/224 (80.36%), Query Frame = 0


Query: 64  MDLRDNSERCLLAVDADEGEEGIEGGSLESPAGTELNDCDGDIILEPYEGMEFESEDAAK 123
           MDLRDNSERCLL VDADEGEEGIEGGS ESPAGTEL +CDGDIILEPYEGMEFESED AK
Sbjct: 1   MDLRDNSERCLLTVDADEGEEGIEGGSFESPAGTELIECDGDIILEPYEGMEFESEDDAK 60

Query: 124 IFYDKYARQLGFVMRVMSCRRSEKDGRILARRLGCNKEGHCVSIRGKFGAVRKPRPSTRE 183
           IFYDKYARQ+GFVMRVMSCRRSEKDGRILARRLGCNKEG+CVSIRGKFGAVRKPRPSTRE
Sbjct: 61  IFYDKYARQVGFVMRVMSCRRSEKDGRILARRLGCNKEGYCVSIRGKFGAVRKPRPSTRE 120

Query: 184 GCKAMIHVKYDKSGKWVITKFVKEHNHPLVVSPREARQTMDDAPSLLLYCGTKYNERILL 243
           GCKAMIHVKYDKSGKWVITKFVKEHNHPLVVSPREARQTMD+          K  + + +
Sbjct: 121 GCKAMIHVKYDKSGKWVITKFVKEHNHPLVVSPREARQTMDEKD--------KQIQELTI 180

Query: 244 ETVPPKPTCSPFPNFLHLVSSDFCSSFLECSNQIAAHTHDQMTN 287
           E    K  CS +   L    + F     E ++Q++    + +TN
Sbjct: 181 ELRNKKRLCSTYQEQL----AAFMKIVEEHTDQLSRKVQNVVTN 212

[Close]

BLAST of Cucsat.G13169.T17 vs. ExPASy TrEMBL
Match: A0A1S3B7B4 (protein FAR1-RELATED SEQUENCE 5 OS=Cucumis melo OX=3656 GN=LOC103486797 PE=4 SV=1)

HSP 1 Score: 329 bits (843), Expect = 1.25e-110
Identity = 171/224 (76.34%), Postives = 183/224 (81.70%), Query Frame = 0


Query: 64  MDLRDNSERCLLAVDADEGEEGIEGGSLESPAGTELNDCDGDIILEPYEGMEFESEDAAK 123
           MDLRDNSERCLLAVDADEGEEGIEGGSLESPAGTELNDCDGDIILEPYEGMEFESEDAAK
Sbjct: 1   MDLRDNSERCLLAVDADEGEEGIEGGSLESPAGTELNDCDGDIILEPYEGMEFESEDAAK 60

Query: 124 IFYDKYARQLGFVMRVMSCRRSEKDGRILARRLGCNKEGHCVSIRGKFGAVRKPRPSTRE 183
           IFYDKYARQLGFVMRVMSCRRSEKDGRILARRLGCNKEGHCVSIRGKFGAVRKPRPSTRE
Sbjct: 61  IFYDKYARQLGFVMRVMSCRRSEKDGRILARRLGCNKEGHCVSIRGKFGAVRKPRPSTRE 120

Query: 184 GCKAMIHVKYDKSGKWVITKFVKEHNHPLVVSPREARQTMDDAPSLLLYCGTKYNERILL 243
           GCKAMIHVKYDKSGKWVITKFVKEHNHPLVVS REARQTMD+          K  + + +
Sbjct: 121 GCKAMIHVKYDKSGKWVITKFVKEHNHPLVVSAREARQTMDEKD--------KQIQELTI 180

Query: 244 ETVPPKPTCSPFPNFLHLVSSDFCSSFLECSNQIAAHTHDQMTN 287
           E    K  CS +   L    + F     E ++Q++    + +TN
Sbjct: 181 ELRNKKRLCSTYQEQL----AAFMKIVEEHTDQLSRKVQNVVTN 212

[Close]

BLAST of Cucsat.G13169.T17 vs. ExPASy TrEMBL
Match: A0A5A7TJS5 (Protein FAR1-RELATED SEQUENCE 5 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G005740 PE=4 SV=1)

HSP 1 Score: 326 bits (835), Expect = 5.29e-110
Identity = 160/162 (98.77%), Postives = 160/162 (98.77%), Query Frame = 0


Query: 64  MDLRDNSERCLLAVDADEGEEGIEGGSLESPAGTELNDCDGDIILEPYEGMEFESEDAAK 123
           MDLRDNSERCLLAVDADEGEEGIEGGSLESPAGTELNDCDGDIILEPYEGMEFESEDAAK
Sbjct: 1   MDLRDNSERCLLAVDADEGEEGIEGGSLESPAGTELNDCDGDIILEPYEGMEFESEDAAK 60

Query: 124 IFYDKYARQLGFVMRVMSCRRSEKDGRILARRLGCNKEGHCVSIRGKFGAVRKPRPSTRE 183
           IFYDKYARQLGFVMRVMSCRRSEKDGRILARRLGCNKEGHCVSIRGKFGAVRKPRPSTRE
Sbjct: 61  IFYDKYARQLGFVMRVMSCRRSEKDGRILARRLGCNKEGHCVSIRGKFGAVRKPRPSTRE 120

Query: 184 GCKAMIHVKYDKSGKWVITKFVKEHNHPLVVSPREARQTMDD 225
           GCKAMIHVKYDKSGKWVITKFVKEHNHPLVVS REARQTM D
Sbjct: 121 GCKAMIHVKYDKSGKWVITKFVKEHNHPLVVSAREARQTMGD 162

[Close]

BLAST of Cucsat.G13169.T17 vs. ExPASy TrEMBL
Match: A0A6J1DLA3 (protein FAR1-RELATED SEQUENCE 5 OS=Momordica charantia OX=3673 GN=LOC111021572 PE=4 SV=1)

HSP 1 Score: 318 bits (815), Expect = 2.25e-106
Identity = 165/224 (73.66%), Postives = 180/224 (80.36%), Query Frame = 0


Query: 64  MDLRDNSERCLLAVDADEGEEGIEGGSLESPAGTELNDCDGDIILEPYEGMEFESEDAAK 123
           MDLRDNSERCLL VDADEGEEGIEGGS ESPAGTEL +CDGDIILEPYEGMEFESED AK
Sbjct: 1   MDLRDNSERCLLTVDADEGEEGIEGGSFESPAGTELIECDGDIILEPYEGMEFESEDDAK 60

Query: 124 IFYDKYARQLGFVMRVMSCRRSEKDGRILARRLGCNKEGHCVSIRGKFGAVRKPRPSTRE 183
           IFYDKYARQ+GFVMRVMSCRRSEKDGRILARRLGCNKEG+CVSIRGKFGAVRKPRPSTRE
Sbjct: 61  IFYDKYARQVGFVMRVMSCRRSEKDGRILARRLGCNKEGYCVSIRGKFGAVRKPRPSTRE 120

Query: 184 GCKAMIHVKYDKSGKWVITKFVKEHNHPLVVSPREARQTMDDAPSLLLYCGTKYNERILL 243
           GCKAMIHVKYDKSGKWVITKFVKEHNHPLVVSPREARQTMD+          K  + + +
Sbjct: 121 GCKAMIHVKYDKSGKWVITKFVKEHNHPLVVSPREARQTMDEKD--------KQIQELTI 180

Query: 244 ETVPPKPTCSPFPNFLHLVSSDFCSSFLECSNQIAAHTHDQMTN 287
           E    K  CS +   L    + F     E ++Q++    + +TN
Sbjct: 181 ELRNKKRLCSTYQEQL----AAFMKIVEEHTDQLSRKVQNVVTN 212

[Close]

BLAST of Cucsat.G13169.T17 vs. ExPASy TrEMBL
Match: A0A6J1J157 (protein FAR1-RELATED SEQUENCE 5-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111481745 PE=4 SV=1)

HSP 1 Score: 317 bits (813), Expect = 5.40e-106
Identity = 166/228 (72.81%), Postives = 182/228 (79.82%), Query Frame = 0


Query: 60  DNFQMDLRDNSERCLLAVDADEGEEGIEGGSLESPAGTELNDCDGDIILEPYEGMEFESE 119
           DNFQMDLRDNSERC+L VDAD  EEGIEGGS ESPAGTEL + DGDIILEPYEGMEFESE
Sbjct: 2   DNFQMDLRDNSERCVLTVDADAVEEGIEGGSFESPAGTELIEGDGDIILEPYEGMEFESE 61

Query: 120 DAAKIFYDKYARQLGFVMRVMSCRRSEKDGRILARRLGCNKEGHCVSIRGKFGAVRKPRP 179
           DAAKIFYDKYARQ+GFVMRVMSCRRSEKDGRILARRLGCNKEG+CVSIRGKFGAVRKPRP
Sbjct: 62  DAAKIFYDKYARQVGFVMRVMSCRRSEKDGRILARRLGCNKEGYCVSIRGKFGAVRKPRP 121

Query: 180 STREGCKAMIHVKYDKSGKWVITKFVKEHNHPLVVSPREARQTMDDAPSLLLYCGTKYNE 239
           STREGCKAMIHVKYDKSGKWVITKFVKEHNHPLVVSPREARQTMD+          K  +
Sbjct: 122 STREGCKAMIHVKYDKSGKWVITKFVKEHNHPLVVSPREARQTMDEKD--------KQIQ 181

Query: 240 RILLETVPPKPTCSPFPNFLHLVSSDFCSSFLECSNQIAAHTHDQMTN 287
            + +E    K  CS +   L    + F     E ++Q++    + +TN
Sbjct: 182 ELTIELRNKKRLCSTYQEQL----AAFMKIVEEHTDQLSRKVQNVVTN 217

[Close]

BLAST of Cucsat.G13169.T17 vs. ExPASy TrEMBL
Match: A0A6J1F5F7 (protein FAR1-RELATED SEQUENCE 5-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111442478 PE=4 SV=1)

HSP 1 Score: 310 bits (794), Expect = 3.49e-103
Identity = 162/224 (72.32%), Postives = 178/224 (79.46%), Query Frame = 0


Query: 64  MDLRDNSERCLLAVDADEGEEGIEGGSLESPAGTELNDCDGDIILEPYEGMEFESEDAAK 123
           MDLRDNSERC+L VDAD GEEGIEGGS ESPAGTEL + DGDIILEPYEGMEFESEDAAK
Sbjct: 1   MDLRDNSERCVLTVDADAGEEGIEGGSFESPAGTELIEGDGDIILEPYEGMEFESEDAAK 60

Query: 124 IFYDKYARQLGFVMRVMSCRRSEKDGRILARRLGCNKEGHCVSIRGKFGAVRKPRPSTRE 183
           IFYDKYARQ+GFVMRVMSCRRSEKDGRILARRLGCNKEG+CVSIRGKFGAVRKPRPSTRE
Sbjct: 61  IFYDKYARQVGFVMRVMSCRRSEKDGRILARRLGCNKEGYCVSIRGKFGAVRKPRPSTRE 120

Query: 184 GCKAMIHVKYDKSGKWVITKFVKEHNHPLVVSPREARQTMDDAPSLLLYCGTKYNERILL 243
           GCKAMIHVKYDK GKWVITKFVKEHNHPLVVSPREARQTMD+          K  + + +
Sbjct: 121 GCKAMIHVKYDKFGKWVITKFVKEHNHPLVVSPREARQTMDEKD--------KQIQELTI 180

Query: 244 ETVPPKPTCSPFPNFLHLVSSDFCSSFLECSNQIAAHTHDQMTN 287
           E    K  CS +   L    + F     E ++Q++    + +TN
Sbjct: 181 ELRNKKRLCSTYQEQL----AAFMKIVEEHTDQLSRKVQNVVTN 212

The following BLAST results are available for this feature:

BLAST of Cucsat.G13169.T17 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SZL8	7.0e-26	48.85	Protein FAR1-RELATED SEQUENCE 5 OS=Arabidopsis thaliana OX=3702 GN=FRS5 PE=1 SV=...	[more]
Q3EBQ3	8.6e-16	38.98	Protein FAR1-RELATED SEQUENCE 2 OS=Arabidopsis thaliana OX=3702 GN=FRS2 PE=1 SV=...	[more]
Q9SWG3	1.5e-15	36.36	Protein FAR-RED IMPAIRED RESPONSE 1 OS=Arabidopsis thaliana OX=3702 GN=FAR1 PE=1...	[more]
Q9LIE5	1.0e-13	35.46	Protein FAR-RED ELONGATED HYPOCOTYL 3 OS=Arabidopsis thaliana OX=3702 GN=FHY3 PE...	[more]
Q9ZVC9	1.5e-12	34.56	Protein FAR1-RELATED SEQUENCE 3 OS=Arabidopsis thaliana OX=3702 GN=FRS3 PE=1 SV=...	[more]

BLAST of Cucsat.G13169.T17 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN59476.2	2.65e-165	100.00	hypothetical protein Csa_001154 [Cucumis sativus]	[more]
XP_004136586.3	1.58e-111	76.79	protein FAR1-RELATED SEQUENCE 5 [Cucumis sativus] >XP_011652117.2 protein FAR1-R...	[more]
XP_008443098.1	2.59e-110	76.34	PREDICTED: protein FAR1-RELATED SEQUENCE 5 [Cucumis melo]	[more]
KAA0043703.1	1.09e-109	98.77	protein FAR1-RELATED SEQUENCE 5 [Cucumis melo var. makuwa] >TYK25431.1 protein F...	[more]
XP_022154282.1	4.66e-106	73.66	protein FAR1-RELATED SEQUENCE 5 [Momordica charantia]	[more]

BLAST of Cucsat.G13169.T17 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3B7B4	1.25e-110	76.34	protein FAR1-RELATED SEQUENCE 5 OS=Cucumis melo OX=3656 GN=LOC103486797 PE=4 SV=...	[more]
A0A5A7TJS5	5.29e-110	98.77	Protein FAR1-RELATED SEQUENCE 5 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_...	[more]
A0A6J1DLA3	2.25e-106	73.66	protein FAR1-RELATED SEQUENCE 5 OS=Momordica charantia OX=3673 GN=LOC111021572 P...	[more]
A0A6J1J157	5.40e-106	72.81	protein FAR1-RELATED SEQUENCE 5-like isoform X1 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1F5F7	3.49e-103	72.32	protein FAR1-RELATED SEQUENCE 5-like isoform X1 OS=Cucurbita moschata OX=3662 GN...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004330	FAR1 DNA binding domain	PFAM	PF03101	FAR1	coord: 125..213 e-value: 3.2E-28 score: 98.3
None	No IPR available	PANTHER	PTHR46328:SF17	FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN	coord: 80..225
None	No IPR available	PANTHER	PTHR46328	FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED	coord: 80..225

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cucsat.G13169	Cucsat.G13169	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsat.G13169.T17.E1	Cucsat.G13169.T17.E1	exon
Cucsat.G13169.T17.E2	Cucsat.G13169.T17.E2	exon
Cucsat.G13169.T17.E3	Cucsat.G13169.T17.E3	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsat.G13169.T17.C1	Cucsat.G13169.T17.C1	CDS
Cucsat.G13169.T17.C2	Cucsat.G13169.T17.C2	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cucsat.G13169.T17	Cucsat.G13169.T17-protein	polypeptide