Cucsat.G13169.T14 (mRNA) Cucumber (B10) v3

Overview


Name	Cucsat.G13169.T14
Type	mRNA
Organism	Cucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description	protein FAR1-RELATED SEQUENCE 5
Location	ctg1838: 1495594 .. 1499409 (+)
RNA-Seq Expression	Cucsat.G13169.T14
Synteny	Cucsat.G13169.T14

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATACACATCTCTGTTTTCAGTTTTCACCTTCTTTATCTTCTTTTTCACTCCCTTTTCCCTCCATCCTCAACTCTTTTCTCGAAGCTTCTTTCACATTAATCACCCCAAGCAAACGCCGCCCCCGCCCCCGCCACTCCCTTTCTTTCTTCCTTCTGCCCAATCAACTCTTCCACCTCTCATCAACGGTATTGTTTCTCCTACTTCTTCTTCTTCTTTTCCTCTTTTCCAAATTCTTGGCGTTCCAGTTTTAAGTTATGATAAGAAGATAATTGAATTGATTACGCTTGAAAACTCTATTCTTCCTCTGGGTTTCATTTTTTATTGCAAATTCAATTGTTGTTTCTGTTTACTTAACACAGACACCGAATTTTGCTTTACAGAGTCGACTCTAGTTTCCCATTTCAGGACTTGGGTTTGCCGCCATTTTTTGTTTTTGATGATCTGAATTAGGAAATGGGGTATTTATATTTGATGTTTTATGTCAGTTTTTCGCTGTGTCTCTTCCATTGCTGATGGATTTTCCCTTTTTTCCCTCTTTCCTACCCTGTTAATTCAGTCGAGAGGGATTTTTTTTTCATATGCTTTTAGAAATCAATGTGTGATCATCATCTTTCTTTTTTCCACTTTCTTCCTGAGTGATTTAGTTATAAATATTGATAACTTTCAGATGGATTTGAGAGATAATAGTGAAAGATGTCTTCTGGCAGTGGACGCAGACGAGGGAGAGGAAGGGATAGAGGGAGGATCATTAGAGAGTCCAGCGGGAACAGAATTAAATGATTGTGATGGAGATATTATTCTTGAGCCTTATGAGGGAATGGAATTTGAATCGGAAGATGCTGCCAAGATTTTCTATGATAAGTATGCTCGTCAACTGGGATTTGTTATGCGTGTGATGTCCTGTCGTCGTTCTGAAAAAGATGGGCGAATACTTGCTCGAAGACTTGGATGCAACAAAGAGGGACATTGTGTCAGCATCCGAGGTAAATTTGGGGCAGTTCGGAAGCCACGGCCGAGTACACGAGAAGGCTGTAAGGCAATGATTCATGTCAAATATGATAAGTCTGGGAAATGGGTGATTACAAAATTTGTAAAGGAACATAATCATCCTCTTGTGGTTTCTCCTCGTGAAGCTCGGCAGACCATGGTCAGTATTTCTCTTCCCCTATTGTTATCTTCAATCAAACATAATACTTTAGAATAAAACTGTGTTCTTTACTTTTTAAGGGAGATGGAAGTAAAAACATCTTTGCCTCTTCACCCCTCAACTGCTTTGTAGGGTATCTATAAAAATTCAAAGATTATGTATATTTACTGTAGTTGTTACCTTGCTTTTAGGGAGAAACCTCTAGTTTCATCAATAAATTGTTGGAGATTAAAATGGTTTTTTTCTGATCGAAGGACATTAATTTTCTCTATCGGAAGCAAGTATACTAAAGAAGCGGCAAAATTTTATAAGACCAATTTTTAGCATGAAGAATTGTTGATCGTGCATAATGTTTATATTAGTCCTAGTATTAAAATGAATGGATTGTTAAAGAAAGGAAAACAAAGATGAATTTATGAAGTTTATCCAAAAACAATTTTGTCACTTCGCACATTAAAACCACAATTTTCTCGTTCTGCATATTATCTAATCACTATGTCACAGTAAGTTTTACTTTTAGCAAAGCAACTGAACTATTGTTTGCATATTTTATTGACGCATATGCCACTGCTAACCTCTTTAAGTTCGAGTATGGGTTTAACAATAATTTTAGTTTTGTTAGGAGGAAGCTTGGCCTTTTAACTGACTAATATGAATACATCTATTAAATAAAACTGACCTGACCATGATTAGTTCAGCCAGTTAAGGAGAAAAATTGAACGTCCACTTTGGAGTTTGGTAGGGTGCTTGGGTTTGGCGAAGCAAAAGTTATATAGGCAATATACTTGCTAACTCATTTGGATGAAATATGAATTAAGGAGAAGCAAATAACATGCTTATTCCCTTAGAAGTGCTAATATAGACTATGGGGTGTGTTGTTTTGTTGGGTCTTTCGAGAGAGAAACAAAAGAACCTTTCAAAGCTTAGAAAGAGGTCCTTATGATGTTCAGTCTCTTGCTAGGTCCGATGTTTTTATTTGGGTGTAGGCGAAGAAACCTTTTTGTAACAGTAAGTTGGGTCTTATTTTCTAGATTGGAGATCCTTCTTCCTTTAATGGAAAATTCTCGCTTTTGAGCGTGTTTTCTGGATGCTCTTGTGTTCGTTCATTCTTTCTTAATGAATGTTCAGTTCTTTAAAAAAACGTGTGTAAATATATGATATATGTACATATACAAATATATAGACTAAATATGGTTTGGTCCTGTCTGGTATTTTGTTATGAAATTCTTTAGGATGACGCTCCTTCCTTGCTTCTATATTGTGGAACAAAATACAACGAGCGGATTCTCCTTGAGACTGTCCCCCCTAAGCCAACTTGTTCTCCATTTCCGAACTTCCTACATCTTGTCTCTTCTGATTTTTGTTCGAGCTTTTTGGAGTGTAGTAACCAGATAGCTGCACACACACATGACCAGATGACAAATGAATATAACTATTCAGTCTCAATACTGATGGCTATACTGATATAATTACTAAGATTTGGGAAAAGTACAGTTGTTCGTACATACTAACTTGAGCTTCATACCTTCCAGGCATGTCTTTCCCTTTTCAACCACCAATCGGTATATGTTACCTAGCCTTCTTGTTCTATAGGTGAATTTCATCGATTTTTTAGAACATAACATGTTTTGATACTTTCGTTTGTGATGCCTTACGTGATTGTCTGCATTTTCACCTCTATCTTAATGGTTGGAGCCATGATGATCACCCACCTAGCATATTAGTTGCTCGTGAATATTCTACTATACCATTCGTAGTTTGGGAAACTAGTAAACTGACGAGAGATTTGAAACTTAACAACAACAAAAAAAATCTTTAACTGCAATTACAGAAGAAGAATGAATTGTATGTTCATAGCTAAATCTTTCTGTGGGTGATTGACATATAACTATAGTATTGCATCATGATGAAAAATCATTGATTTTGAACTTTCCTTGCAGGATGAAAAAGACAAGCAAATACAGGAACTCACTATAGAGCTGCGGAATAAGAAACGGTTATGTTCGACATACCAAGAACAGCTTGCTGCATTTATGAAAATTGTTGAAGAACATACCGACCAATTATCAAAAAAAGTTCAAAATGTAGTTACCAACCTTAAAGAATTTGAGTCCATTGAGCAAGAACTATTGCATCCTAGGTAGCCTAGCCATTGAGTGAGTATCTGATTGCTATTTAACCCTTCTCCTTCATTTTGAGATTTTTGTTCACTTCATCAAAAAGTATTCATTATGTCATTAAATACAACTAGCTTCTTATGCAGTGTGGTCGGTGGCCATCGATATTTGGAGGTTGGTAGCAGACAAAGAACAATGAGAACCCTTGAGAAAGCCCCTCAAAAGGCATTCTTTACAGTCTACCCTGCCCCACTCCAAACTCAGAGGGAGCTATAGAAATGAGCAATGCAATATTTGTTGTGTGTATCATAGCAAGCAGTGGCACGAAGTTGAAGTACGTGGAGAACATCTGAGCGGAGGGAAAGTTTTGAATGAAGAGACGATTTTATTTACCTCTCTAAGTGAATAACCAATGCAGATTTTTTTAGAAATTTTGCTGAAATTTTATTTGCTTTGTGTATATGTTTGCATCTGATACTGCAAGCAGAACCATCCAAATCCCATCCTGGATGCCCACAGAGCTATAATGAGAAAATCAATATTAGAATTGTT

Coding sequence (CDS)

TACACATCTCTGTTTTCAGTTTTCACCTTCTTTATCTTCTTTTTCACTCCCTTTTCCCTCCATCCTCAACTCTTTTCTCGAAGCTTCTTTCACATTAATCACCCCAAGCAAACGCCGCCCCCGCCCCCGCCACTCCCTTTCTTTCTTCCTTCTGCCCAATCAACTCTTCCACCTCTCATCAACGTGGACGCAGACGAGGGAGAGGAAGGGATAGAGGGAGGATCATTAGAGAGTCCAGCGGGAACAGAATTAAATGATTGTGATGGAGATATTATTCTTGAGCCTTATGAGGGAATGGAATTTGAATCGGAAGATGCTGCCAAGATTTTCTATGATAAGTATGCTCGTCAACTGGGATTTGTTATGCGTGTGATGTCCTGTCGTCGTTCTGAAAAAGATGGGCGAATACTTGCTCGAAGACTTGGATGCAACAAAGAGGGACATTGTGTCAGCATCCGAGGTAAATTTGGGGCAGTTCGGAAGCCACGGCCGAGTACACGAGAAGGCTGTAAGGCAATGATTCATGTCAAATATGATAAGTCTGGGAAATGGGTGATTACAAAATTTGTAAAGGAACATAATCATCCTCTTGTGGTTTCTCCTCGTGAAGCTCGGCAGACCATGGATGACGCTCCTTCCTTGCTTCTATATTGTGGAACAAAATACAACGAGCGGATTCTCCTTGAGACTGTCCCCCCTAAGCCAACTTGTTCTCCATTTCCGAACTTCCTACATCTTGTCTCTTCTGATTTTTGTTCGAGCTTTTTGGAGTGTAGTAACCAGATAGCTGCACACACACATGACCAGATGACAAATGAATATAACTATTCAGTCTCAATACTGATGGCTATACTGATATAA

Protein sequence

YTSLFSVFTFFIFFFTPFSLHPQLFSRSFFHINHPKQTPPPPPPLPFFLPSAQSTLPPLINVDADEGEEGIEGGSLESPAGTELNDCDGDIILEPYEGMEFESEDAAKIFYDKYARQLGFVMRVMSCRRSEKDGRILARRLGCNKEGHCVSIRGKFGAVRKPRPSTREGCKAMIHVKYDKSGKWVITKFVKEHNHPLVVSPREARQTMDDAPSLLLYCGTKYNERILLETVPPKPTCSPFPNFLHLVSSDFCSSFLECSNQIAAHTHDQMTNEYNYSVSILMAILI

Homology

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BLAST of Cucsat.G13169.T14 vs. ExPASy Swiss-Prot
Match: Q9SZL8 (Protein FAR1-RELATED SEQUENCE 5 OS=Arabidopsis thaliana OX=3702 GN=FRS5 PE=1 SV=1)

HSP 1 Score: 119.4 bits (298), Expect = 6.7e-26
Identity = 64/131 (48.85%), Postives = 84/131 (64.12%), Query Frame = 0


Query: 70  GIEGGSLESPAGTELNDCDGDIILEPYEGMEFESEDAAKIFYDKYARQLGFVMRVMSCRR 129
           G+ G S       E   CD  + LEPY+G+EFESE+AAK FY+ YAR++GF  RV S RR
Sbjct: 49  GLVGNSGNYFPNQEEEACD-LLDLEPYDGLEFESEEAAKAFYNSYARRIGFSTRVSSSRR 108

Query: 130 SEKDGRILARRLGCNKEG--HCVSIRGKFGAVRKPRPSTREGCKAMIHVKYDKSGKWVIT 189
           S +DG I+ R+  C KEG  +    R K   +++PR  TR GCKA + VK   SGKW+++
Sbjct: 109 SRRDGAIIQRQFVCAKEGFRNMNEKRTKDREIKRPRTITRVGCKASLSVKMQDSGKWLVS 168

Query: 190 KFVKEHNHPLV 199
            FVK+HNH LV
Sbjct: 169 GFVKDHNHELV 178

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BLAST of Cucsat.G13169.T14 vs. ExPASy Swiss-Prot
Match: Q3EBQ3 (Protein FAR1-RELATED SEQUENCE 2 OS=Arabidopsis thaliana OX=3702 GN=FRS2 PE=1 SV=1)

HSP 1 Score: 85.9 bits (211), Expect = 8.2e-16
Identity = 46/118 (38.98%), Postives = 70/118 (59.32%), Query Frame = 0


Query: 80  AGTELNDCDGDIILEPYEGMEFESEDAAKIFYDKYARQLGFVMRVMSCRRSEKDGRILAR 139
           A T  N      + E   GM+FES++AA  FY +YAR +GF + + + RRS++ G+ +  
Sbjct: 23  ASTSGNVAQCATVSELRNGMDFESKEAAYYFYREYARSVGFGITIKASRRSKRSGKFIDV 82

Query: 140 RLGCNKEGHCVSIRGKFGAVRKPRPSTREGCKAMIHVKYDKSGKWVITKFVKEHNHPL 198
           ++ C++ G   + R K  A+  PR   + GCKA +H+K  +  KWVI  FVKEHNH +
Sbjct: 83  KIACSRFG---TKREKATAI-NPRSCPKTGCKAGLHMKRKEDEKWVIYNFVKEHNHEI 136

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BLAST of Cucsat.G13169.T14 vs. ExPASy Swiss-Prot
Match: Q9SWG3 (Protein FAR-RED IMPAIRED RESPONSE 1 OS=Arabidopsis thaliana OX=3702 GN=FAR1 PE=1 SV=1)

HSP 1 Score: 85.1 bits (209), Expect = 1.4e-15
Identity = 40/110 (36.36%), Postives = 64/110 (58.18%), Query Frame = 0


Query: 89  GDIILEPYEGMEFESEDAAKIFYDKYARQLGFVMRVMSCRRSEKDGRILARRLGCNKEGH 148
           GD+ LEP  G++F++ +AA IFY +YA+ +GF   + + RRS+K    +  +  C++ G 
Sbjct: 45  GDLDLEPRNGIDFDTHEAAYIFYQEYAKSMGFTTSIKNSRRSKKTKDFIDAKFACSRYGV 104

Query: 149 CVSIRGKFGAVRKPRPSTREGCKAMIHVKYDKSGKWVITKFVKEHNHPLV 199
                   G+  +     +  CKA +HVK    GKW+I +FVK+HNH L+
Sbjct: 105 TPESESS-GSSSRRSTVKKTDCKASMHVKRRPDGKWIIHEFVKDHNHELL 153

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BLAST of Cucsat.G13169.T14 vs. ExPASy Swiss-Prot
Match: Q9LIE5 (Protein FAR-RED ELONGATED HYPOCOTYL 3 OS=Arabidopsis thaliana OX=3702 GN=FHY3 PE=1 SV=1)

HSP 1 Score: 79.0 bits (193), Expect = 1.0e-13
Identity = 50/141 (35.46%), Postives = 67/141 (47.52%), Query Frame = 0


Query: 79  PAGTELNDCDGDIILEPYEGMEFESEDAAKIFYDKYARQLGFVMRVMSCRRSEKDGRILA 138
           P G EL +    + LEP  GMEFES   A  FY +Y+R +GF   + + RRS+     + 
Sbjct: 55  PTG-ELVEYTEGMNLEPLNGMEFESHGEAYSFYQEYSRAMGFNTAIQNSRRSKTTREFID 114

Query: 139 RRLGCNKEGHCVSIRGKFGAVR----KPRPSTREG--------CKAMIHVKYDKSGKWVI 198
            +  C++ G        F   R    K  P    G        CKA +HVK    GKWVI
Sbjct: 115 AKFACSRYGTKREYDKSFNRPRARQSKQDPENMAGRRTCAKTDCKASMHVKRRPDGKWVI 174

Query: 199 TKFVKEHNHPLVVSPREARQT 208
             FV+EHNH L+ +   + QT
Sbjct: 175 HSFVREHNHELLPAQAVSEQT 194

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BLAST of Cucsat.G13169.T14 vs. ExPASy Swiss-Prot
Match: Q9ZVC9 (Protein FAR1-RELATED SEQUENCE 3 OS=Arabidopsis thaliana OX=3702 GN=FRS3 PE=1 SV=2)

HSP 1 Score: 75.9 bits (185), Expect = 8.4e-13
Identity = 47/136 (34.56%), Postives = 64/136 (47.06%), Query Frame = 0


Query: 65  DEGEEGIEGGSLESPAGTELNDCDGDIILEPYEGMEFESEDAAKIFYDKYARQLGFVMRV 124
           DEG+      S ++     L   D   I EP  GMEF SE  AK FYD+Y+RQLGF  ++
Sbjct: 19  DEGDVEPSDCSGQNNMDNSLGVQDEIGIAEPCVGMEFNSEKEAKSFYDEYSRQLGFTSKL 78

Query: 125 MSCRRSEKDGRILARRLGCNKEGHCVSIRGKFGAVRKPRPSTREGCKAMIHVKYDKSGKW 184
           +       DG +  R   C+               ++ +    E C AM+ ++     KW
Sbjct: 79  L----PRTDGSVSVREFVCSSSS------------KRSKRRLSESCDAMVRIELQGHEKW 138

Query: 185 VITKFVKEHNHPLVVS 201
           V+TKFVKEH H L  S
Sbjct: 139 VVTKFVKEHTHGLASS 138

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BLAST of Cucsat.G13169.T14 vs. NCBI nr
Match: KGN59476.2 (hypothetical protein Csa_001154 [Cucumis sativus])

HSP 1 Score: 454 bits (1168), Expect = 1.68e-157
Identity = 217/219 (99.09%), Postives = 218/219 (99.54%), Query Frame = 0


Query: 59  LINVDADEGEEGIEGGSLESPAGTELNDCDGDIILEPYEGMEFESEDAAKIFYDKYARQL 118
           L+ VDADEGEEGIEGGSLESPAGTELNDCDGDIILEPYEGMEFESEDAAKIFYDKYARQL
Sbjct: 58  LLAVDADEGEEGIEGGSLESPAGTELNDCDGDIILEPYEGMEFESEDAAKIFYDKYARQL 117

Query: 119 GFVMRVMSCRRSEKDGRILARRLGCNKEGHCVSIRGKFGAVRKPRPSTREGCKAMIHVKY 178
           GFVMRVMSCRRSEKDGRILARRLGCNKEGHCVSIRGKFGAVRKPRPSTREGCKAMIHVKY
Sbjct: 118 GFVMRVMSCRRSEKDGRILARRLGCNKEGHCVSIRGKFGAVRKPRPSTREGCKAMIHVKY 177

Query: 179 DKSGKWVITKFVKEHNHPLVVSPREARQTMDDAPSLLLYCGTKYNERILLETVPPKPTCS 238
           DKSGKWVITKFVKEHNHPLVVSPREARQTMDDAPSLLLYCGTKYNERILLETVPPKPTCS
Sbjct: 178 DKSGKWVITKFVKEHNHPLVVSPREARQTMDDAPSLLLYCGTKYNERILLETVPPKPTCS 237

Query: 239 PFPNFLHLVSSDFCSSFLECSNQIAAHTHDQMTNEYNYS 277
           PFPNFLHLVSSDFCSSFLECSNQIAAHTHDQMTNEYNYS
Sbjct: 238 PFPNFLHLVSSDFCSSFLECSNQIAAHTHDQMTNEYNYS 276

[Close]

BLAST of Cucsat.G13169.T14 vs. NCBI nr
Match: XP_004136586.3 (protein FAR1-RELATED SEQUENCE 5 [Cucumis sativus] >XP_011652117.2 protein FAR1-RELATED SEQUENCE 5 [Cucumis sativus])

HSP 1 Score: 311 bits (798), Expect = 1.02e-103
Identity = 160/214 (74.77%), Postives = 173/214 (80.84%), Query Frame = 0


Query: 59  LINVDADEGEEGIEGGSLESPAGTELNDCDGDIILEPYEGMEFESEDAAKIFYDKYARQL 118
           L+ VDADEGEEGIEGGSLESPAGTELNDCDGDIILEPYEGMEFESEDAAKIFYDKYARQL
Sbjct: 11  LLAVDADEGEEGIEGGSLESPAGTELNDCDGDIILEPYEGMEFESEDAAKIFYDKYARQL 70

Query: 119 GFVMRVMSCRRSEKDGRILARRLGCNKEGHCVSIRGKFGAVRKPRPSTREGCKAMIHVKY 178
           GFVMRVMSCRRSEKDGRILARRLGCNKEGHCVSIRGKFGAVRKPRPSTREGCKAMIHVKY
Sbjct: 71  GFVMRVMSCRRSEKDGRILARRLGCNKEGHCVSIRGKFGAVRKPRPSTREGCKAMIHVKY 130

Query: 179 DKSGKWVITKFVKEHNHPLVVSPREARQTMDDAPSLLLYCGTKYNERILLETVPPKPTCS 238
           DKSGKWVITKFVKEHNHPLVVSPREARQTMD+          K  + + +E    K  CS
Sbjct: 131 DKSGKWVITKFVKEHNHPLVVSPREARQTMDEKD--------KQIQELTIELRNKKRLCS 190

Query: 239 PFPNFLHLVSSDFCSSFLECSNQIAAHTHDQMTN 272
            +   L    + F     E ++Q++    + +TN
Sbjct: 191 TYQEQL----AAFMKIVEEHTDQLSKKVQNVVTN 212

[Close]

BLAST of Cucsat.G13169.T14 vs. NCBI nr
Match: XP_008443098.1 (PREDICTED: protein FAR1-RELATED SEQUENCE 5 [Cucumis melo])

HSP 1 Score: 308 bits (790), Expect = 1.68e-102
Identity = 159/214 (74.30%), Postives = 172/214 (80.37%), Query Frame = 0


Query: 59  LINVDADEGEEGIEGGSLESPAGTELNDCDGDIILEPYEGMEFESEDAAKIFYDKYARQL 118
           L+ VDADEGEEGIEGGSLESPAGTELNDCDGDIILEPYEGMEFESEDAAKIFYDKYARQL
Sbjct: 11  LLAVDADEGEEGIEGGSLESPAGTELNDCDGDIILEPYEGMEFESEDAAKIFYDKYARQL 70

Query: 119 GFVMRVMSCRRSEKDGRILARRLGCNKEGHCVSIRGKFGAVRKPRPSTREGCKAMIHVKY 178
           GFVMRVMSCRRSEKDGRILARRLGCNKEGHCVSIRGKFGAVRKPRPSTREGCKAMIHVKY
Sbjct: 71  GFVMRVMSCRRSEKDGRILARRLGCNKEGHCVSIRGKFGAVRKPRPSTREGCKAMIHVKY 130

Query: 179 DKSGKWVITKFVKEHNHPLVVSPREARQTMDDAPSLLLYCGTKYNERILLETVPPKPTCS 238
           DKSGKWVITKFVKEHNHPLVVS REARQTMD+          K  + + +E    K  CS
Sbjct: 131 DKSGKWVITKFVKEHNHPLVVSAREARQTMDEKD--------KQIQELTIELRNKKRLCS 190

Query: 239 PFPNFLHLVSSDFCSSFLECSNQIAAHTHDQMTN 272
            +   L    + F     E ++Q++    + +TN
Sbjct: 191 TYQEQL----AAFMKIVEEHTDQLSRKVQNVVTN 212

[Close]

BLAST of Cucsat.G13169.T14 vs. NCBI nr
Match: KAA0043703.1 (protein FAR1-RELATED SEQUENCE 5 [Cucumis melo var. makuwa] >TYK25431.1 protein FAR1-RELATED SEQUENCE 5 [Cucumis melo var. makuwa])

HSP 1 Score: 305 bits (782), Expect = 7.16e-102
Identity = 148/152 (97.37%), Postives = 149/152 (98.03%), Query Frame = 0


Query: 59  LINVDADEGEEGIEGGSLESPAGTELNDCDGDIILEPYEGMEFESEDAAKIFYDKYARQL 118
           L+ VDADEGEEGIEGGSLESPAGTELNDCDGDIILEPYEGMEFESEDAAKIFYDKYARQL
Sbjct: 11  LLAVDADEGEEGIEGGSLESPAGTELNDCDGDIILEPYEGMEFESEDAAKIFYDKYARQL 70

Query: 119 GFVMRVMSCRRSEKDGRILARRLGCNKEGHCVSIRGKFGAVRKPRPSTREGCKAMIHVKY 178
           GFVMRVMSCRRSEKDGRILARRLGCNKEGHCVSIRGKFGAVRKPRPSTREGCKAMIHVKY
Sbjct: 71  GFVMRVMSCRRSEKDGRILARRLGCNKEGHCVSIRGKFGAVRKPRPSTREGCKAMIHVKY 130

Query: 179 DKSGKWVITKFVKEHNHPLVVSPREARQTMDD 210
           DKSGKWVITKFVKEHNHPLVVS REARQTM D
Sbjct: 131 DKSGKWVITKFVKEHNHPLVVSAREARQTMGD 162

[Close]

BLAST of Cucsat.G13169.T14 vs. NCBI nr
Match: XP_022154282.1 (protein FAR1-RELATED SEQUENCE 5 [Momordica charantia])

HSP 1 Score: 300 bits (768), Expect = 3.69e-99
Identity = 154/214 (71.96%), Postives = 170/214 (79.44%), Query Frame = 0


Query: 59  LINVDADEGEEGIEGGSLESPAGTELNDCDGDIILEPYEGMEFESEDAAKIFYDKYARQL 118
           L+ VDADEGEEGIEGGS ESPAGTEL +CDGDIILEPYEGMEFESED AKIFYDKYARQ+
Sbjct: 11  LLTVDADEGEEGIEGGSFESPAGTELIECDGDIILEPYEGMEFESEDDAKIFYDKYARQV 70

Query: 119 GFVMRVMSCRRSEKDGRILARRLGCNKEGHCVSIRGKFGAVRKPRPSTREGCKAMIHVKY 178
           GFVMRVMSCRRSEKDGRILARRLGCNKEG+CVSIRGKFGAVRKPRPSTREGCKAMIHVKY
Sbjct: 71  GFVMRVMSCRRSEKDGRILARRLGCNKEGYCVSIRGKFGAVRKPRPSTREGCKAMIHVKY 130

Query: 179 DKSGKWVITKFVKEHNHPLVVSPREARQTMDDAPSLLLYCGTKYNERILLETVPPKPTCS 238
           DKSGKWVITKFVKEHNHPLVVSPREARQTMD+          K  + + +E    K  CS
Sbjct: 131 DKSGKWVITKFVKEHNHPLVVSPREARQTMDEKD--------KQIQELTIELRNKKRLCS 190

Query: 239 PFPNFLHLVSSDFCSSFLECSNQIAAHTHDQMTN 272
            +   L    + F     E ++Q++    + +TN
Sbjct: 191 TYQEQL----AAFMKIVEEHTDQLSRKVQNVVTN 212

[Close]

BLAST of Cucsat.G13169.T14 vs. ExPASy TrEMBL
Match: A0A0A0LBE0 (FAR1 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G811580 PE=4 SV=1)

HSP 1 Score: 410 bits (1053), Expect = 5.84e-142
Identity = 212/265 (80.00%), Postives = 224/265 (84.53%), Query Frame = 0


Query: 8   FTFFIFFFTPFSLHPQLFSRSFFHINHPKQTPPPPPPLPFFLPSAQSTLPPLINVDADEG 67
           FTFFIFFFTPFSLHPQLFSRSFFHINHPKQTPPPPPPLPFFLPSAQSTLPPLINVDADEG
Sbjct: 16  FTFFIFFFTPFSLHPQLFSRSFFHINHPKQTPPPPPPLPFFLPSAQSTLPPLINVDADEG 75

Query: 68  EEGIEGGSLESPAGTELNDCDGDIILEPYEGMEFESEDAAKIFYDKYARQLGFVMRVMSC 127
           EE IEGGSLESPAGTELNDCDGDIILEPYEGMEFESEDAAKIFYDKYARQLGFVMRVMSC
Sbjct: 76  EEVIEGGSLESPAGTELNDCDGDIILEPYEGMEFESEDAAKIFYDKYARQLGFVMRVMSC 135

Query: 128 RRSEKDGRILARRLGCNKEGHCVSIRGKFGAVRKPRPSTREGCKAMIHVKYDKSGKWVIT 187
           RRSEKDGRILARRLGCNKEGHCVSIRGKFGAVRKPRPSTREGCKAMIHVKYDKSGKWVIT
Sbjct: 136 RRSEKDGRILARRLGCNKEGHCVSIRGKFGAVRKPRPSTREGCKAMIHVKYDKSGKWVIT 195

Query: 188 KFVKEHNHPLVVSPREARQTMDDAPSLLLYCGTKYNERILLETVPPKPTCSPFPNFLHLV 247
           KFVKEHNHPLVVSPREARQTMD+          K  + + +E    K  CS +   L   
Sbjct: 196 KFVKEHNHPLVVSPREARQTMDEKD--------KQIQELTIELRNKKRLCSTYQEQL--- 255

Query: 248 SSDFCSSFLECSNQIAAHTHDQMTN 272
            + F     E ++Q++    + +TN
Sbjct: 256 -AAFMKIVEEHTDQLSKKVQNVVTN 268

[Close]

BLAST of Cucsat.G13169.T14 vs. ExPASy TrEMBL
Match: A0A1S3B7B4 (protein FAR1-RELATED SEQUENCE 5 OS=Cucumis melo OX=3656 GN=LOC103486797 PE=4 SV=1)

HSP 1 Score: 308 bits (790), Expect = 8.13e-103
Identity = 159/214 (74.30%), Postives = 172/214 (80.37%), Query Frame = 0


Query: 59  LINVDADEGEEGIEGGSLESPAGTELNDCDGDIILEPYEGMEFESEDAAKIFYDKYARQL 118
           L+ VDADEGEEGIEGGSLESPAGTELNDCDGDIILEPYEGMEFESEDAAKIFYDKYARQL
Sbjct: 11  LLAVDADEGEEGIEGGSLESPAGTELNDCDGDIILEPYEGMEFESEDAAKIFYDKYARQL 70

Query: 119 GFVMRVMSCRRSEKDGRILARRLGCNKEGHCVSIRGKFGAVRKPRPSTREGCKAMIHVKY 178
           GFVMRVMSCRRSEKDGRILARRLGCNKEGHCVSIRGKFGAVRKPRPSTREGCKAMIHVKY
Sbjct: 71  GFVMRVMSCRRSEKDGRILARRLGCNKEGHCVSIRGKFGAVRKPRPSTREGCKAMIHVKY 130

Query: 179 DKSGKWVITKFVKEHNHPLVVSPREARQTMDDAPSLLLYCGTKYNERILLETVPPKPTCS 238
           DKSGKWVITKFVKEHNHPLVVS REARQTMD+          K  + + +E    K  CS
Sbjct: 131 DKSGKWVITKFVKEHNHPLVVSAREARQTMDEKD--------KQIQELTIELRNKKRLCS 190

Query: 239 PFPNFLHLVSSDFCSSFLECSNQIAAHTHDQMTN 272
            +   L    + F     E ++Q++    + +TN
Sbjct: 191 TYQEQL----AAFMKIVEEHTDQLSRKVQNVVTN 212

[Close]

BLAST of Cucsat.G13169.T14 vs. ExPASy TrEMBL
Match: A0A5A7TJS5 (Protein FAR1-RELATED SEQUENCE 5 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G005740 PE=4 SV=1)

HSP 1 Score: 305 bits (782), Expect = 3.47e-102
Identity = 148/152 (97.37%), Postives = 149/152 (98.03%), Query Frame = 0


Query: 59  LINVDADEGEEGIEGGSLESPAGTELNDCDGDIILEPYEGMEFESEDAAKIFYDKYARQL 118
           L+ VDADEGEEGIEGGSLESPAGTELNDCDGDIILEPYEGMEFESEDAAKIFYDKYARQL
Sbjct: 11  LLAVDADEGEEGIEGGSLESPAGTELNDCDGDIILEPYEGMEFESEDAAKIFYDKYARQL 70

Query: 119 GFVMRVMSCRRSEKDGRILARRLGCNKEGHCVSIRGKFGAVRKPRPSTREGCKAMIHVKY 178
           GFVMRVMSCRRSEKDGRILARRLGCNKEGHCVSIRGKFGAVRKPRPSTREGCKAMIHVKY
Sbjct: 71  GFVMRVMSCRRSEKDGRILARRLGCNKEGHCVSIRGKFGAVRKPRPSTREGCKAMIHVKY 130

Query: 179 DKSGKWVITKFVKEHNHPLVVSPREARQTMDD 210
           DKSGKWVITKFVKEHNHPLVVS REARQTM D
Sbjct: 131 DKSGKWVITKFVKEHNHPLVVSAREARQTMGD 162

[Close]

BLAST of Cucsat.G13169.T14 vs. ExPASy TrEMBL
Match: A0A6J1DLA3 (protein FAR1-RELATED SEQUENCE 5 OS=Momordica charantia OX=3673 GN=LOC111021572 PE=4 SV=1)

HSP 1 Score: 300 bits (768), Expect = 1.79e-99
Identity = 154/214 (71.96%), Postives = 170/214 (79.44%), Query Frame = 0


Query: 59  LINVDADEGEEGIEGGSLESPAGTELNDCDGDIILEPYEGMEFESEDAAKIFYDKYARQL 118
           L+ VDADEGEEGIEGGS ESPAGTEL +CDGDIILEPYEGMEFESED AKIFYDKYARQ+
Sbjct: 11  LLTVDADEGEEGIEGGSFESPAGTELIECDGDIILEPYEGMEFESEDDAKIFYDKYARQV 70

Query: 119 GFVMRVMSCRRSEKDGRILARRLGCNKEGHCVSIRGKFGAVRKPRPSTREGCKAMIHVKY 178
           GFVMRVMSCRRSEKDGRILARRLGCNKEG+CVSIRGKFGAVRKPRPSTREGCKAMIHVKY
Sbjct: 71  GFVMRVMSCRRSEKDGRILARRLGCNKEGYCVSIRGKFGAVRKPRPSTREGCKAMIHVKY 130

Query: 179 DKSGKWVITKFVKEHNHPLVVSPREARQTMDDAPSLLLYCGTKYNERILLETVPPKPTCS 238
           DKSGKWVITKFVKEHNHPLVVSPREARQTMD+          K  + + +E    K  CS
Sbjct: 131 DKSGKWVITKFVKEHNHPLVVSPREARQTMDEKD--------KQIQELTIELRNKKRLCS 190

Query: 239 PFPNFLHLVSSDFCSSFLECSNQIAAHTHDQMTN 272
            +   L    + F     E ++Q++    + +TN
Sbjct: 191 TYQEQL----AAFMKIVEEHTDQLSRKVQNVVTN 212

[Close]

BLAST of Cucsat.G13169.T14 vs. ExPASy TrEMBL
Match: A0A6J1F5F7 (protein FAR1-RELATED SEQUENCE 5-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111442478 PE=4 SV=1)

HSP 1 Score: 292 bits (747), Expect = 2.76e-96
Identity = 151/214 (70.56%), Postives = 168/214 (78.50%), Query Frame = 0


Query: 59  LINVDADEGEEGIEGGSLESPAGTELNDCDGDIILEPYEGMEFESEDAAKIFYDKYARQL 118
           ++ VDAD GEEGIEGGS ESPAGTEL + DGDIILEPYEGMEFESEDAAKIFYDKYARQ+
Sbjct: 11  VLTVDADAGEEGIEGGSFESPAGTELIEGDGDIILEPYEGMEFESEDAAKIFYDKYARQV 70

Query: 119 GFVMRVMSCRRSEKDGRILARRLGCNKEGHCVSIRGKFGAVRKPRPSTREGCKAMIHVKY 178
           GFVMRVMSCRRSEKDGRILARRLGCNKEG+CVSIRGKFGAVRKPRPSTREGCKAMIHVKY
Sbjct: 71  GFVMRVMSCRRSEKDGRILARRLGCNKEGYCVSIRGKFGAVRKPRPSTREGCKAMIHVKY 130

Query: 179 DKSGKWVITKFVKEHNHPLVVSPREARQTMDDAPSLLLYCGTKYNERILLETVPPKPTCS 238
           DK GKWVITKFVKEHNHPLVVSPREARQTMD+          K  + + +E    K  CS
Sbjct: 131 DKFGKWVITKFVKEHNHPLVVSPREARQTMDEKD--------KQIQELTIELRNKKRLCS 190

Query: 239 PFPNFLHLVSSDFCSSFLECSNQIAAHTHDQMTN 272
            +   L    + F     E ++Q++    + +TN
Sbjct: 191 TYQEQL----AAFMKIVEEHTDQLSRKVQNVVTN 212

The following BLAST results are available for this feature:

BLAST of Cucsat.G13169.T14 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SZL8	6.7e-26	48.85	Protein FAR1-RELATED SEQUENCE 5 OS=Arabidopsis thaliana OX=3702 GN=FRS5 PE=1 SV=...	[more]
Q3EBQ3	8.2e-16	38.98	Protein FAR1-RELATED SEQUENCE 2 OS=Arabidopsis thaliana OX=3702 GN=FRS2 PE=1 SV=...	[more]
Q9SWG3	1.4e-15	36.36	Protein FAR-RED IMPAIRED RESPONSE 1 OS=Arabidopsis thaliana OX=3702 GN=FAR1 PE=1...	[more]
Q9LIE5	1.0e-13	35.46	Protein FAR-RED ELONGATED HYPOCOTYL 3 OS=Arabidopsis thaliana OX=3702 GN=FHY3 PE...	[more]
Q9ZVC9	8.4e-13	34.56	Protein FAR1-RELATED SEQUENCE 3 OS=Arabidopsis thaliana OX=3702 GN=FRS3 PE=1 SV=...	[more]

BLAST of Cucsat.G13169.T14 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN59476.2	1.68e-157	99.09	hypothetical protein Csa_001154 [Cucumis sativus]	[more]
XP_004136586.3	1.02e-103	74.77	protein FAR1-RELATED SEQUENCE 5 [Cucumis sativus] >XP_011652117.2 protein FAR1-R...	[more]
XP_008443098.1	1.68e-102	74.30	PREDICTED: protein FAR1-RELATED SEQUENCE 5 [Cucumis melo]	[more]
KAA0043703.1	7.16e-102	97.37	protein FAR1-RELATED SEQUENCE 5 [Cucumis melo var. makuwa] >TYK25431.1 protein F...	[more]
XP_022154282.1	3.69e-99	71.96	protein FAR1-RELATED SEQUENCE 5 [Momordica charantia]	[more]

BLAST of Cucsat.G13169.T14 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LBE0	5.84e-142	80.00	FAR1 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G811580 PE=4 S...	[more]
A0A1S3B7B4	8.13e-103	74.30	protein FAR1-RELATED SEQUENCE 5 OS=Cucumis melo OX=3656 GN=LOC103486797 PE=4 SV=...	[more]
A0A5A7TJS5	3.47e-102	97.37	Protein FAR1-RELATED SEQUENCE 5 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_...	[more]
A0A6J1DLA3	1.79e-99	71.96	protein FAR1-RELATED SEQUENCE 5 OS=Momordica charantia OX=3673 GN=LOC111021572 P...	[more]
A0A6J1F5F7	2.76e-96	70.56	protein FAR1-RELATED SEQUENCE 5-like isoform X1 OS=Cucurbita moschata OX=3662 GN...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004330	FAR1 DNA binding domain	PFAM	PF03101	FAR1	coord: 110..198 e-value: 2.9E-28 score: 98.4
None	No IPR available	PANTHER	PTHR46328	FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED	coord: 62..210
None	No IPR available	PANTHER	PTHR46328:SF17	FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN	coord: 62..210

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cucsat.G13169	Cucsat.G13169	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsat.G13169.T14.E1	Cucsat.G13169.T14.E1	exon
Cucsat.G13169.T14.E2	Cucsat.G13169.T14.E2	exon
Cucsat.G13169.T14.E3	Cucsat.G13169.T14.E3	exon
Cucsat.G13169.T14.E4	Cucsat.G13169.T14.E4	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsat.G13169.T14.C1	Cucsat.G13169.T14.C1	CDS
Cucsat.G13169.T14.C2	Cucsat.G13169.T14.C2	CDS
Cucsat.G13169.T14.C3	Cucsat.G13169.T14.C3	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cucsat.G13169.T14	Cucsat.G13169.T14-protein	polypeptide