Cucsat.G13169.T14 (mRNA) Cucumber (B10) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATACACATCTCTGTTTTCAGTTTTCACCTTCTTTATCTTCTTTTTCACTCCCTTTTCCCTCCATCCTCAACTCTTTTCTCGAAGCTTCTTTCACATTAATCACCCCAAGCAAACGCCGCCCCCGCCCCCGCCACTCCCTTTCTTTCTTCCTTCTGCCCAATCAACTCTTCCACCTCTCATCAACGGTATTGTTTCTCCTACTTCTTCTTCTTCTTTTCCTCTTTTCCAAATTCTTGGCGTTCCAGTTTTAAGTTATGATAAGAAGATAATTGAATTGATTACGCTTGAAAACTCTATTCTTCCTCTGGGTTTCATTTTTTATTGCAAATTCAATTGTTGTTTCTGTTTACTTAACACAGACACCGAATTTTGCTTTACAGAGTCGACTCTAGTTTCCCATTTCAGGACTTGGGTTTGCCGCCATTTTTTGTTTTTGATGATCTGAATTAGGAAATGGGGTATTTATATTTGATGTTTTATGTCAGTTTTTCGCTGTGTCTCTTCCATTGCTGATGGATTTTCCCTTTTTTCCCTCTTTCCTACCCTGTTAATTCAGTCGAGAGGGATTTTTTTTTCATATGCTTTTAGAAATCAATGTGTGATCATCATCTTTCTTTTTTCCACTTTCTTCCTGAGTGATTTAGTTATAAATATTGATAACTTTCAGATGGATTTGAGAGATAATAGTGAAAGATGTCTTCTGGCAGTGGACGCAGACGAGGGAGAGGAAGGGATAGAGGGAGGATCATTAGAGAGTCCAGCGGGAACAGAATTAAATGATTGTGATGGAGATATTATTCTTGAGCCTTATGAGGGAATGGAATTTGAATCGGAAGATGCTGCCAAGATTTTCTATGATAAGTATGCTCGTCAACTGGGATTTGTTATGCGTGTGATGTCCTGTCGTCGTTCTGAAAAAGATGGGCGAATACTTGCTCGAAGACTTGGATGCAACAAAGAGGGACATTGTGTCAGCATCCGAGGTAAATTTGGGGCAGTTCGGAAGCCACGGCCGAGTACACGAGAAGGCTGTAAGGCAATGATTCATGTCAAATATGATAAGTCTGGGAAATGGGTGATTACAAAATTTGTAAAGGAACATAATCATCCTCTTGTGGTTTCTCCTCGTGAAGCTCGGCAGACCATGGTCAGTATTTCTCTTCCCCTATTGTTATCTTCAATCAAACATAATACTTTAGAATAAAACTGTGTTCTTTACTTTTTAAGGGAGATGGAAGTAAAAACATCTTTGCCTCTTCACCCCTCAACTGCTTTGTAGGGTATCTATAAAAATTCAAAGATTATGTATATTTACTGTAGTTGTTACCTTGCTTTTAGGGAGAAACCTCTAGTTTCATCAATAAATTGTTGGAGATTAAAATGGTTTTTTTCTGATCGAAGGACATTAATTTTCTCTATCGGAAGCAAGTATACTAAAGAAGCGGCAAAATTTTATAAGACCAATTTTTAGCATGAAGAATTGTTGATCGTGCATAATGTTTATATTAGTCCTAGTATTAAAATGAATGGATTGTTAAAGAAAGGAAAACAAAGATGAATTTATGAAGTTTATCCAAAAACAATTTTGTCACTTCGCACATTAAAACCACAATTTTCTCGTTCTGCATATTATCTAATCACTATGTCACAGTAAGTTTTACTTTTAGCAAAGCAACTGAACTATTGTTTGCATATTTTATTGACGCATATGCCACTGCTAACCTCTTTAAGTTCGAGTATGGGTTTAACAATAATTTTAGTTTTGTTAGGAGGAAGCTTGGCCTTTTAACTGACTAATATGAATACATCTATTAAATAAAACTGACCTGACCATGATTAGTTCAGCCAGTTAAGGAGAAAAATTGAACGTCCACTTTGGAGTTTGGTAGGGTGCTTGGGTTTGGCGAAGCAAAAGTTATATAGGCAATATACTTGCTAACTCATTTGGATGAAATATGAATTAAGGAGAAGCAAATAACATGCTTATTCCCTTAGAAGTGCTAATATAGACTATGGGGTGTGTTGTTTTGTTGGGTCTTTCGAGAGAGAAACAAAAGAACCTTTCAAAGCTTAGAAAGAGGTCCTTATGATGTTCAGTCTCTTGCTAGGTCCGATGTTTTTATTTGGGTGTAGGCGAAGAAACCTTTTTGTAACAGTAAGTTGGGTCTTATTTTCTAGATTGGAGATCCTTCTTCCTTTAATGGAAAATTCTCGCTTTTGAGCGTGTTTTCTGGATGCTCTTGTGTTCGTTCATTCTTTCTTAATGAATGTTCAGTTCTTTAAAAAAACGTGTGTAAATATATGATATATGTACATATACAAATATATAGACTAAATATGGTTTGGTCCTGTCTGGTATTTTGTTATGAAATTCTTTAGGATGACGCTCCTTCCTTGCTTCTATATTGTGGAACAAAATACAACGAGCGGATTCTCCTTGAGACTGTCCCCCCTAAGCCAACTTGTTCTCCATTTCCGAACTTCCTACATCTTGTCTCTTCTGATTTTTGTTCGAGCTTTTTGGAGTGTAGTAACCAGATAGCTGCACACACACATGACCAGATGACAAATGAATATAACTATTCAGTCTCAATACTGATGGCTATACTGATATAATTACTAAGATTTGGGAAAAGTACAGTTGTTCGTACATACTAACTTGAGCTTCATACCTTCCAGGCATGTCTTTCCCTTTTCAACCACCAATCGGTATATGTTACCTAGCCTTCTTGTTCTATAGGTGAATTTCATCGATTTTTTAGAACATAACATGTTTTGATACTTTCGTTTGTGATGCCTTACGTGATTGTCTGCATTTTCACCTCTATCTTAATGGTTGGAGCCATGATGATCACCCACCTAGCATATTAGTTGCTCGTGAATATTCTACTATACCATTCGTAGTTTGGGAAACTAGTAAACTGACGAGAGATTTGAAACTTAACAACAACAAAAAAAATCTTTAACTGCAATTACAGAAGAAGAATGAATTGTATGTTCATAGCTAAATCTTTCTGTGGGTGATTGACATATAACTATAGTATTGCATCATGATGAAAAATCATTGATTTTGAACTTTCCTTGCAGGATGAAAAAGACAAGCAAATACAGGAACTCACTATAGAGCTGCGGAATAAGAAACGGTTATGTTCGACATACCAAGAACAGCTTGCTGCATTTATGAAAATTGTTGAAGAACATACCGACCAATTATCAAAAAAAGTTCAAAATGTAGTTACCAACCTTAAAGAATTTGAGTCCATTGAGCAAGAACTATTGCATCCTAGGTAGCCTAGCCATTGAGTGAGTATCTGATTGCTATTTAACCCTTCTCCTTCATTTTGAGATTTTTGTTCACTTCATCAAAAAGTATTCATTATGTCATTAAATACAACTAGCTTCTTATGCAGTGTGGTCGGTGGCCATCGATATTTGGAGGTTGGTAGCAGACAAAGAACAATGAGAACCCTTGAGAAAGCCCCTCAAAAGGCATTCTTTACAGTCTACCCTGCCCCACTCCAAACTCAGAGGGAGCTATAGAAATGAGCAATGCAATATTTGTTGTGTGTATCATAGCAAGCAGTGGCACGAAGTTGAAGTACGTGGAGAACATCTGAGCGGAGGGAAAGTTTTGAATGAAGAGACGATTTTATTTACCTCTCTAAGTGAATAACCAATGCAGATTTTTTTAGAAATTTTGCTGAAATTTTATTTGCTTTGTGTATATGTTTGCATCTGATACTGCAAGCAGAACCATCCAAATCCCATCCTGGATGCCCACAGAGCTATAATGAGAAAATCAATATTAGAATTGTT TACACATCTCTGTTTTCAGTTTTCACCTTCTTTATCTTCTTTTTCACTCCCTTTTCCCTCCATCCTCAACTCTTTTCTCGAAGCTTCTTTCACATTAATCACCCCAAGCAAACGCCGCCCCCGCCCCCGCCACTCCCTTTCTTTCTTCCTTCTGCCCAATCAACTCTTCCACCTCTCATCAACGTGGACGCAGACGAGGGAGAGGAAGGGATAGAGGGAGGATCATTAGAGAGTCCAGCGGGAACAGAATTAAATGATTGTGATGGAGATATTATTCTTGAGCCTTATGAGGGAATGGAATTTGAATCGGAAGATGCTGCCAAGATTTTCTATGATAAGTATGCTCGTCAACTGGGATTTGTTATGCGTGTGATGTCCTGTCGTCGTTCTGAAAAAGATGGGCGAATACTTGCTCGAAGACTTGGATGCAACAAAGAGGGACATTGTGTCAGCATCCGAGGTAAATTTGGGGCAGTTCGGAAGCCACGGCCGAGTACACGAGAAGGCTGTAAGGCAATGATTCATGTCAAATATGATAAGTCTGGGAAATGGGTGATTACAAAATTTGTAAAGGAACATAATCATCCTCTTGTGGTTTCTCCTCGTGAAGCTCGGCAGACCATGGATGACGCTCCTTCCTTGCTTCTATATTGTGGAACAAAATACAACGAGCGGATTCTCCTTGAGACTGTCCCCCCTAAGCCAACTTGTTCTCCATTTCCGAACTTCCTACATCTTGTCTCTTCTGATTTTTGTTCGAGCTTTTTGGAGTGTAGTAACCAGATAGCTGCACACACACATGACCAGATGACAAATGAATATAACTATTCAGTCTCAATACTGATGGCTATACTGATATAA YTSLFSVFTFFIFFFTPFSLHPQLFSRSFFHINHPKQTPPPPPPLPFFLPSAQSTLPPLINVDADEGEEGIEGGSLESPAGTELNDCDGDIILEPYEGMEFESEDAAKIFYDKYARQLGFVMRVMSCRRSEKDGRILARRLGCNKEGHCVSIRGKFGAVRKPRPSTREGCKAMIHVKYDKSGKWVITKFVKEHNHPLVVSPREARQTMDDAPSLLLYCGTKYNERILLETVPPKPTCSPFPNFLHLVSSDFCSSFLECSNQIAAHTHDQMTNEYNYSVSILMAILI Homology
BLAST of Cucsat.G13169.T14 vs. ExPASy Swiss-Prot
Match: Q9SZL8 (Protein FAR1-RELATED SEQUENCE 5 OS=Arabidopsis thaliana OX=3702 GN=FRS5 PE=1 SV=1) HSP 1 Score: 119.4 bits (298), Expect = 6.7e-26 Identity = 64/131 (48.85%), Postives = 84/131 (64.12%), Query Frame = 0
BLAST of Cucsat.G13169.T14 vs. ExPASy Swiss-Prot
Match: Q3EBQ3 (Protein FAR1-RELATED SEQUENCE 2 OS=Arabidopsis thaliana OX=3702 GN=FRS2 PE=1 SV=1) HSP 1 Score: 85.9 bits (211), Expect = 8.2e-16 Identity = 46/118 (38.98%), Postives = 70/118 (59.32%), Query Frame = 0
BLAST of Cucsat.G13169.T14 vs. ExPASy Swiss-Prot
Match: Q9SWG3 (Protein FAR-RED IMPAIRED RESPONSE 1 OS=Arabidopsis thaliana OX=3702 GN=FAR1 PE=1 SV=1) HSP 1 Score: 85.1 bits (209), Expect = 1.4e-15 Identity = 40/110 (36.36%), Postives = 64/110 (58.18%), Query Frame = 0
BLAST of Cucsat.G13169.T14 vs. ExPASy Swiss-Prot
Match: Q9LIE5 (Protein FAR-RED ELONGATED HYPOCOTYL 3 OS=Arabidopsis thaliana OX=3702 GN=FHY3 PE=1 SV=1) HSP 1 Score: 79.0 bits (193), Expect = 1.0e-13 Identity = 50/141 (35.46%), Postives = 67/141 (47.52%), Query Frame = 0
BLAST of Cucsat.G13169.T14 vs. ExPASy Swiss-Prot
Match: Q9ZVC9 (Protein FAR1-RELATED SEQUENCE 3 OS=Arabidopsis thaliana OX=3702 GN=FRS3 PE=1 SV=2) HSP 1 Score: 75.9 bits (185), Expect = 8.4e-13 Identity = 47/136 (34.56%), Postives = 64/136 (47.06%), Query Frame = 0
BLAST of Cucsat.G13169.T14 vs. NCBI nr
Match: KGN59476.2 (hypothetical protein Csa_001154 [Cucumis sativus]) HSP 1 Score: 454 bits (1168), Expect = 1.68e-157 Identity = 217/219 (99.09%), Postives = 218/219 (99.54%), Query Frame = 0
BLAST of Cucsat.G13169.T14 vs. NCBI nr
Match: XP_004136586.3 (protein FAR1-RELATED SEQUENCE 5 [Cucumis sativus] >XP_011652117.2 protein FAR1-RELATED SEQUENCE 5 [Cucumis sativus]) HSP 1 Score: 311 bits (798), Expect = 1.02e-103 Identity = 160/214 (74.77%), Postives = 173/214 (80.84%), Query Frame = 0
BLAST of Cucsat.G13169.T14 vs. NCBI nr
Match: XP_008443098.1 (PREDICTED: protein FAR1-RELATED SEQUENCE 5 [Cucumis melo]) HSP 1 Score: 308 bits (790), Expect = 1.68e-102 Identity = 159/214 (74.30%), Postives = 172/214 (80.37%), Query Frame = 0
BLAST of Cucsat.G13169.T14 vs. NCBI nr
Match: KAA0043703.1 (protein FAR1-RELATED SEQUENCE 5 [Cucumis melo var. makuwa] >TYK25431.1 protein FAR1-RELATED SEQUENCE 5 [Cucumis melo var. makuwa]) HSP 1 Score: 305 bits (782), Expect = 7.16e-102 Identity = 148/152 (97.37%), Postives = 149/152 (98.03%), Query Frame = 0
BLAST of Cucsat.G13169.T14 vs. NCBI nr
Match: XP_022154282.1 (protein FAR1-RELATED SEQUENCE 5 [Momordica charantia]) HSP 1 Score: 300 bits (768), Expect = 3.69e-99 Identity = 154/214 (71.96%), Postives = 170/214 (79.44%), Query Frame = 0
BLAST of Cucsat.G13169.T14 vs. ExPASy TrEMBL
Match: A0A0A0LBE0 (FAR1 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G811580 PE=4 SV=1) HSP 1 Score: 410 bits (1053), Expect = 5.84e-142 Identity = 212/265 (80.00%), Postives = 224/265 (84.53%), Query Frame = 0
BLAST of Cucsat.G13169.T14 vs. ExPASy TrEMBL
Match: A0A1S3B7B4 (protein FAR1-RELATED SEQUENCE 5 OS=Cucumis melo OX=3656 GN=LOC103486797 PE=4 SV=1) HSP 1 Score: 308 bits (790), Expect = 8.13e-103 Identity = 159/214 (74.30%), Postives = 172/214 (80.37%), Query Frame = 0
BLAST of Cucsat.G13169.T14 vs. ExPASy TrEMBL
Match: A0A5A7TJS5 (Protein FAR1-RELATED SEQUENCE 5 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G005740 PE=4 SV=1) HSP 1 Score: 305 bits (782), Expect = 3.47e-102 Identity = 148/152 (97.37%), Postives = 149/152 (98.03%), Query Frame = 0
BLAST of Cucsat.G13169.T14 vs. ExPASy TrEMBL
Match: A0A6J1DLA3 (protein FAR1-RELATED SEQUENCE 5 OS=Momordica charantia OX=3673 GN=LOC111021572 PE=4 SV=1) HSP 1 Score: 300 bits (768), Expect = 1.79e-99 Identity = 154/214 (71.96%), Postives = 170/214 (79.44%), Query Frame = 0
BLAST of Cucsat.G13169.T14 vs. ExPASy TrEMBL
Match: A0A6J1F5F7 (protein FAR1-RELATED SEQUENCE 5-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111442478 PE=4 SV=1) HSP 1 Score: 292 bits (747), Expect = 2.76e-96 Identity = 151/214 (70.56%), Postives = 168/214 (78.50%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
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