Cucsat.G13169.T6 (mRNA) Cucumber (B10) v3

Overview


Name	Cucsat.G13169.T6
Type	mRNA
Organism	Cucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description	protein FAR1-RELATED SEQUENCE 5
Location	ctg1838: 1495588 .. 1499619 (+)
RNA-Seq Expression	Cucsat.G13169.T6
Synteny	Cucsat.G13169.T6

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

AGACTAATACACATCTCTGTTTTCAGTTTTCACCTTCTTTATCTTCTTTTTCACTCCCTTTTCCCTCCATCCTCAACTCTTTTCTCGAAGCTTCTTTCACATTAATCACCCCAAGCAAACGCCGCCCCCGCCCCCGCCACTCCCTTTCTTTCTTCCTTCTGCCCAATCAACTCTTCCACCTCTCATCAACGGTATTGTTTCTCCTACTTCTTCTTCTTCTTTTCCTCTTTTCCAAATTCTTGGCGTTCCAGTTTTAAGTTATGATAAGAAGATAATTGAATTGATTACGCTTGAAAACTCTATTCTTCCTCTGGGTTTCATTTTTTATTGCAAATTCAATTGTTGTTTCTGTTTACTTAACACAGACACCGAATTTTGCTTTACAGAGTCGACTCTAGTTTCCCATTTCAGGACTTGGGTTTGCCGCCATTTTTTGTTTTTGATGATCTGAATTAGGAAATGGGGTATTTATATTTGATGTTTTATGTCAGTTTTTCGCTGTGTCTCTTCCATTGCTGATGGATTTTCCCTTTTTTCCCTCTTTCCTACCCTGTTAATTCAGTCGAGAGGGATTTTTTTTTCATATGCTTTTAGAAATCAATGTGTGATCATCATCTTTCTTTTTTCCACTTTCTTCCTGAGTGATTTAGTTATAAATATTGATAACTTTCAGATGGATTTGAGAGATAATAGTGAAAGATGTCTTCTGGCAGTGGACGCAGACGAGGGAGAGGAAGGGATAGAGGGAGGATCATTAGAGAGTCCAGCGGGAACAGAATTAAATGATTGTGATGGAGATATTATTCTTGAGCCTTATGAGGGAATGGAATTTGAATCGGAAGATGCTGCCAAGATTTTCTATGATAAGTATGCTCGTCAACTGGGATTTGTTATGCGTGTGATGTCCTGTCGTCGTTCTGAAAAAGATGGGCGAATACTTGCTCGAAGACTTGGATGCAACAAAGAGGGACATTGTGTCAGCATCCGAGGTAAATTTGGGGCAGTTCGGAAGCCACGGCCGAGTACACGAGAAGGCTGTAAGGCAATGATTCATGTCAAATATGATAAGTCTGGGAAATGGGTGATTACAAAATTTGTAAAGGAACATAATCATCCTCTTGTGGTTTCTCCTCGTGAAGCTCGGCAGACCATGGTCAGTATTTCTCTTCCCCTATTGTTATCTTCAATCAAACATAATACTTTAGAATAAAACTGTGTTCTTTACTTTTTAAGGGAGATGGAAGTAAAAACATCTTTGCCTCTTCACCCCTCAACTGCTTTGTAGGGTATCTATAAAAATTCAAAGATTATGTATATTTACTGTAGTTGTTACCTTGCTTTTAGGGAGAAACCTCTAGTTTCATCAATAAATTGTTGGAGATTAAAATGGTTTTTTTCTGATCGAAGGACATTAATTTTCTCTATCGGAAGCAAGTATACTAAAGAAGCGGCAAAATTTTATAAGACCAATTTTTAGCATGAAGAATTGTTGATCGTGCATAATGTTTATATTAGTCCTAGTATTAAAATGAATGGATTGTTAAAGAAAGGAAAACAAAGATGAATTTATGAAGTTTATCCAAAAACAATTTTGTCACTTCGCACATTAAAACCACAATTTTCTCGTTCTGCATATTATCTAATCACTATGTCACAGTAAGTTTTACTTTTAGCAAAGCAACTGAACTATTGTTTGCATATTTTATTGACGCATATGCCACTGCTAACCTCTTTAAGTTCGAGTATGGGTTTAACAATAATTTTAGTTTTGTTAGGAGGAAGCTTGGCCTTTTAACTGACTAATATGAATACATCTATTAAATAAAACTGACCTGACCATGATTAGTTCAGCCAGTTAAGGAGAAAAATTGAACGTCCACTTTGGAGTTTGGTAGGGTGCTTGGGTTTGGCGAAGCAAAAGTTATATAGGCAATATACTTGCTAACTCATTTGGATGAAATATGAATTAAGGAGAAGCAAATAACATGCTTATTCCCTTAGAAGTGCTAATATAGACTATGGGGTGTGTTGTTTTGTTGGGTCTTTCGAGAGAGAAACAAAAGAACCTTTCAAAGCTTAGAAAGAGGTCCTTATGATGTTCAGTCTCTTGCTAGGTCCGATGTTTTTATTTGGGTGTAGGCGAAGAAACCTTTTTGTAACAGTAAGTTGGGTCTTATTTTCTAGATTGGAGATCCTTCTTCCTTTAATGGAAAATTCTCGCTTTTGAGCGTGTTTTCTGGATGCTCTTGTGTTCGTTCATTCTTTCTTAATGAATGTTCAGTTCTTTAAAAAAACGTGTGTAAATATATGATATATGTACATATACAAATATATAGACTAAATATGGTTTGGTCCTGTCTGGTATTTTGTTATGAAATTCTTTAGGATGACGCTCCTTCCTTGCTTCTATATTGTGGAACAAAATACAACGAGCGGATTCTCCTTGAGACTGTCCCCCCTAAGCCAACTTGTTCTCCATTTCCGAACTTCCTACATCTTGTCTCTTCTGATTTTTGTTCGAGCTTTTTGGAGTGTAGTAACCAGATAGCTGCACACACACATGACCAGATGACAAATGAATATAACTATTCAGTCTCAATACTGATGGCTATACTGATATAATTACTAAGATTTGGGAAAAGTACAGTTGTTCGTACATACTAACTTGAGCTTCATACCTTCCAGGCATGTCTTTCCCTTTTCAACCACCAATCGGTATATGTTACCTAGCCTTCTTGTTCTATAGGTGAATTTCATCGATTTTTTAGAACATAACATGTTTTGATACTTTCGTTTGTGATGCCTTACGTGATTGTCTGCATTTTCACCTCTATCTTAATGGTTGGAGCCATGATGATCACCCACCTAGCATATTAGTTGCTCGTGAATATTCTACTATACCATTCGTAGTTTGGGAAACTAGTAAACTGACGAGAGATTTGAAACTTAACAACAACAAAAAAAATCTTTAACTGCAATTACAGAAGAAGAATGAATTGTATGTTCATAGCTAAATCTTTCTGTGGGTGATTGACATATAACTATAGTATTGCATCATGATGAAAAATCATTGATTTTGAACTTTCCTTGCAGGATGAAAAAGACAAGCAAATACAGGAACTCACTATAGAGCTGCGGAATAAGAAACGGTTATGTTCGACATACCAAGAACAGCTTGCTGCATTTATGAAAATTGTTGAAGAACATACCGACCAATTATCAAAAAAAGTTCAAAATGTAGTTACCAACCTTAAAGAATTTGAGTCCATTGAGCAAGAACTATTGCATCCTAGGTAGCCTAGCCATTGAGTGAGTATCTGATTGCTATTTAACCCTTCTCCTTCATTTTGAGATTTTTGTTCACTTCATCAAAAAGTATTCATTATGTCATTAAATACAACTAGCTTCTTATGCAGTGTGGTCGGTGGCCATCGATATTTGGAGGTTGGTAGCAGACAAAGAACAATGAGAACCCTTGAGAAAGCCCCTCAAAAGGCATTCTTTACAGTCTACCCTGCCCCACTCCAAACTCAGAGGGAGCTATAGAAATGAGCAATGCAATATTTGTTGTGTGTATCATAGCAAGCAGTGGCACGAAGTTGAAGTACGTGGAGAACATCTGAGCGGAGGGAAAGTTTTGAATGAAGAGACGATTTTATTTACCTCTCTAAGTGAATAACCAATGCAGATTTTTTTAGAAATTTTGCTGAAATTTTATTTGCTTTGTGTATATGTTTGCATCTGATACTGCAAGCAGAACCATCCAAATCCCATCCTGGATGCCCACAGAGCTATAATGAGAAAATCAATATTAGAATTGTTTCATTCTGCTAATTTTTACCAGGATTATCTGTTGGTCTGACTTGTAGTTATTTTATATCTTTTCTCAACTTGGTGGAACCACCGCCACGCTTTCCCCAGGTTGAGATGCTACTTTTCTTTCTTGTGTTTATTTCAGGTGACTTAAAAGCCCAACTTATTAATCTCTCTTTTATAATAACAAAAGAATTGGGAATGAATTTCAGATTTGGG

Coding sequence (CDS)

ACTAATACACATCTCTGTTTTCAGTTTTCACCTTCTTTATCTTCTTTTTCACTCCCTTTTCCCTCCATCCTCAACTCTTTTCTCGAAGCTTCTTTCACATTAATCACCCCAAGCAAACGCCGCCCCCGCCCCCGCCACTCCCTTTCTTTCTTCCTTCTGCCCAATCAACTCTTCCACCTCTCATCAACGATGGATTTGAGAGATAATAGTGAAAGATGTCTTCTGGCAGTGGACGCAGACGAGGGAGAGGAAGGGATAGAGGGAGGATCATTAGAGAGTCCAGCGGGAACAGAATTAAATGATTGTGATGGAGATATTATTCTTGAGCCTTATGAGGGAATGGAATTTGAATCGGAAGATGCTGCCAAGATTTTCTATGATAAGTATGCTCGTCAACTGGGATTTGTTATGCGTGTGATGTCCTGTCGTCGTTCTGAAAAAGATGGGCGAATACTTGCTCGAAGACTTGGATGCAACAAAGAGGGACATTGTGTCAGCATCCGAGGTAAATTTGGGGCAGTTCGGAAGCCACGGCCGAGTACACGAGAAGGCTGTAAGGCAATGATTCATGTCAAATATGATAAGTCTGGGAAATGGGTGATTACAAAATTTGTAAAGGAACATAATCATCCTCTTGTGGTTTCTCCTCGTGAAGCTCGGCAGACCATGGATGAAAAAGACAAGCAAATACAGGAACTCACTATAGAGCTGCGGAATAAGAAACGGTTATGTTCGACATACCAAGAACAGCTTGCTGCATTTATGAAAATTGTTGAAGAACATACCGACCAATTATCAAAAAAAGTTCAAAATGTAGTTACCAACCTTAAAGAATTTGAGTCCATTGAGCAAGAACTATTGCATCCTAGGTAG

Protein sequence

TNTHLCFQFSPSLSSFSLPFPSILNSFLEASFTLITPSKRRPRPRHSLSFFLLPNQLFHLSSTMDLRDNSERCLLAVDADEGEEGIEGGSLESPAGTELNDCDGDIILEPYEGMEFESEDAAKIFYDKYARQLGFVMRVMSCRRSEKDGRILARRLGCNKEGHCVSIRGKFGAVRKPRPSTREGCKAMIHVKYDKSGKWVITKFVKEHNHPLVVSPREARQTMDEKDKQIQELTIELRNKKRLCSTYQEQLAAFMKIVEEHTDQLSKKVQNVVTNLKEFESIEQELLHPR

Homology

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BLAST of Cucsat.G13169.T6 vs. ExPASy Swiss-Prot
Match: Q9SZL8 (Protein FAR1-RELATED SEQUENCE 5 OS=Arabidopsis thaliana OX=3702 GN=FRS5 PE=1 SV=1)

HSP 1 Score: 115.2 bits (287), Expect = 1.3e-24
Identity = 79/209 (37.80%), Postives = 110/209 (52.63%), Query Frame = 0


Query: 85  GIEGGSLESPAGTELNDCDGDIILEPYEGMEFESEDAAKIFYDKYARQLGFVMRVMSCRR 144
           G+ G S       E   CD  + LEPY+G+EFESE+AAK FY+ YAR++GF  RV S RR
Sbjct: 49  GLVGNSGNYFPNQEEEACD-LLDLEPYDGLEFESEEAAKAFYNSYARRIGFSTRVSSSRR 108

Query: 145 SEKDGRILARRLGCNKEG--HCVSIRGKFGAVRKPRPSTREGCKAMIHVKYDKSGKWVIT 204
           S +DG I+ R+  C KEG  +    R K   +++PR  TR GCKA + VK   SGKW+++
Sbjct: 109 SRRDGAIIQRQFVCAKEGFRNMNEKRTKDREIKRPRTITRVGCKASLSVKMQDSGKWLVS 168

Query: 205 KFVKEHNHPLVVSP-----REARQTMDEKDKQIQELTIELRNKKRLCSTYQEQLAAFMKI 264
            FVK+HNH LV        R  RQ        I  L       +R+ S   ++     K+
Sbjct: 169 GFVKDHNHELVPPDQVHCLRSHRQISGPAKTLIDTLQAAGMGPRRIMSALIKEYGGISKV 228

Query: 265 VEEHTDQLSKKVQNVVTNLKEFESIEQEL 287
                D      +N + N ++ +SIE E+
Sbjct: 229 GFTEVD-----CRNYMRNNRQ-KSIEGEI 250

[Close]

BLAST of Cucsat.G13169.T6 vs. ExPASy Swiss-Prot
Match: Q9SWG3 (Protein FAR-RED IMPAIRED RESPONSE 1 OS=Arabidopsis thaliana OX=3702 GN=FAR1 PE=1 SV=1)

HSP 1 Score: 85.1 bits (209), Expect = 1.4e-15
Identity = 40/110 (36.36%), Postives = 64/110 (58.18%), Query Frame = 0


Query: 104 GDIILEPYEGMEFESEDAAKIFYDKYARQLGFVMRVMSCRRSEKDGRILARRLGCNKEGH 163
           GD+ LEP  G++F++ +AA IFY +YA+ +GF   + + RRS+K    +  +  C++ G 
Sbjct: 45  GDLDLEPRNGIDFDTHEAAYIFYQEYAKSMGFTTSIKNSRRSKKTKDFIDAKFACSRYGV 104

Query: 164 CVSIRGKFGAVRKPRPSTREGCKAMIHVKYDKSGKWVITKFVKEHNHPLV 214
                   G+  +     +  CKA +HVK    GKW+I +FVK+HNH L+
Sbjct: 105 TPESESS-GSSSRRSTVKKTDCKASMHVKRRPDGKWIIHEFVKDHNHELL 153

[Close]

BLAST of Cucsat.G13169.T6 vs. ExPASy Swiss-Prot
Match: Q3EBQ3 (Protein FAR1-RELATED SEQUENCE 2 OS=Arabidopsis thaliana OX=3702 GN=FRS2 PE=1 SV=1)

HSP 1 Score: 84.3 bits (207), Expect = 2.4e-15
Identity = 59/174 (33.91%), Postives = 94/174 (54.02%), Query Frame = 0


Query: 95  AGTELNDCDGDIILEPYEGMEFESEDAAKIFYDKYARQLGFVMRVMSCRRSEKDGRILAR 154
           A T  N      + E   GM+FES++AA  FY +YAR +GF + + + RRS++ G+ +  
Sbjct: 23  ASTSGNVAQCATVSELRNGMDFESKEAAYYFYREYARSVGFGITIKASRRSKRSGKFIDV 82

Query: 155 RLGCNKEGHCVSIRGKFGAVRKPRPSTREGCKAMIHVKYDKSGKWVITKFVKEHNHPLVV 214
           ++ C++ G   + R K  A+  PR   + GCKA +H+K  +  KWVI  FVKEHNH   +
Sbjct: 83  KIACSRFG---TKREKATAI-NPRSCPKTGCKAGLHMKRKEDEKWVIYNFVKEHNHE--I 142

Query: 215 SPREARQTMDEKDKQIQELTIELRNKKRLCSTYQEQLAAFMKIVEEHTDQLSKK 269
            P +   ++  K+K    L I    KK L    +E+    +K++ EH  ++  K
Sbjct: 143 CPDDFYVSVRGKNKPAGALAI----KKGLQLALEEE---DLKLLLEHFMEMQDK 183

[Close]

BLAST of Cucsat.G13169.T6 vs. ExPASy Swiss-Prot
Match: Q9LIE5 (Protein FAR-RED ELONGATED HYPOCOTYL 3 OS=Arabidopsis thaliana OX=3702 GN=FHY3 PE=1 SV=1)

HSP 1 Score: 78.6 bits (192), Expect = 1.3e-13
Identity = 50/141 (35.46%), Postives = 67/141 (47.52%), Query Frame = 0


Query: 94  PAGTELNDCDGDIILEPYEGMEFESEDAAKIFYDKYARQLGFVMRVMSCRRSEKDGRILA 153
           P G EL +    + LEP  GMEFES   A  FY +Y+R +GF   + + RRS+     + 
Sbjct: 55  PTG-ELVEYTEGMNLEPLNGMEFESHGEAYSFYQEYSRAMGFNTAIQNSRRSKTTREFID 114

Query: 154 RRLGCNKEGHCVSIRGKFGAVR----KPRPSTREG--------CKAMIHVKYDKSGKWVI 213
            +  C++ G        F   R    K  P    G        CKA +HVK    GKWVI
Sbjct: 115 AKFACSRYGTKREYDKSFNRPRARQSKQDPENMAGRRTCAKTDCKASMHVKRRPDGKWVI 174

Query: 214 TKFVKEHNHPLVVSPREARQT 223
             FV+EHNH L+ +   + QT
Sbjct: 175 HSFVREHNHELLPAQAVSEQT 194

[Close]

BLAST of Cucsat.G13169.T6 vs. ExPASy Swiss-Prot
Match: Q9ZVC9 (Protein FAR1-RELATED SEQUENCE 3 OS=Arabidopsis thaliana OX=3702 GN=FRS3 PE=1 SV=2)

HSP 1 Score: 75.1 bits (183), Expect = 1.5e-12
Identity = 47/136 (34.56%), Postives = 64/136 (47.06%), Query Frame = 0


Query: 80  DEGEEGIEGGSLESPAGTELNDCDGDIILEPYEGMEFESEDAAKIFYDKYARQLGFVMRV 139
           DEG+      S ++     L   D   I EP  GMEF SE  AK FYD+Y+RQLGF  ++
Sbjct: 19  DEGDVEPSDCSGQNNMDNSLGVQDEIGIAEPCVGMEFNSEKEAKSFYDEYSRQLGFTSKL 78

Query: 140 MSCRRSEKDGRILARRLGCNKEGHCVSIRGKFGAVRKPRPSTREGCKAMIHVKYDKSGKW 199
           +       DG +  R   C+               ++ +    E C AM+ ++     KW
Sbjct: 79  L----PRTDGSVSVREFVCSSSS------------KRSKRRLSESCDAMVRIELQGHEKW 138

Query: 200 VITKFVKEHNHPLVVS 216
           V+TKFVKEH H L  S
Sbjct: 139 VVTKFVKEHTHGLASS 138

[Close]

BLAST of Cucsat.G13169.T6 vs. NCBI nr
Match: XP_004136586.3 (protein FAR1-RELATED SEQUENCE 5 [Cucumis sativus] >XP_011652117.2 protein FAR1-RELATED SEQUENCE 5 [Cucumis sativus])

HSP 1 Score: 449 bits (1154), Expect = 7.85e-158
Identity = 227/227 (100.00%), Postives = 227/227 (100.00%), Query Frame = 0


Query: 64  MDLRDNSERCLLAVDADEGEEGIEGGSLESPAGTELNDCDGDIILEPYEGMEFESEDAAK 123
           MDLRDNSERCLLAVDADEGEEGIEGGSLESPAGTELNDCDGDIILEPYEGMEFESEDAAK
Sbjct: 1   MDLRDNSERCLLAVDADEGEEGIEGGSLESPAGTELNDCDGDIILEPYEGMEFESEDAAK 60

Query: 124 IFYDKYARQLGFVMRVMSCRRSEKDGRILARRLGCNKEGHCVSIRGKFGAVRKPRPSTRE 183
           IFYDKYARQLGFVMRVMSCRRSEKDGRILARRLGCNKEGHCVSIRGKFGAVRKPRPSTRE
Sbjct: 61  IFYDKYARQLGFVMRVMSCRRSEKDGRILARRLGCNKEGHCVSIRGKFGAVRKPRPSTRE 120

Query: 184 GCKAMIHVKYDKSGKWVITKFVKEHNHPLVVSPREARQTMDEKDKQIQELTIELRNKKRL 243
           GCKAMIHVKYDKSGKWVITKFVKEHNHPLVVSPREARQTMDEKDKQIQELTIELRNKKRL
Sbjct: 121 GCKAMIHVKYDKSGKWVITKFVKEHNHPLVVSPREARQTMDEKDKQIQELTIELRNKKRL 180

Query: 244 CSTYQEQLAAFMKIVEEHTDQLSKKVQNVVTNLKEFESIEQELLHPR 290
           CSTYQEQLAAFMKIVEEHTDQLSKKVQNVVTNLKEFESIEQELLHPR
Sbjct: 181 CSTYQEQLAAFMKIVEEHTDQLSKKVQNVVTNLKEFESIEQELLHPR 227

[Close]

BLAST of Cucsat.G13169.T6 vs. NCBI nr
Match: XP_008443098.1 (PREDICTED: protein FAR1-RELATED SEQUENCE 5 [Cucumis melo])

HSP 1 Score: 441 bits (1133), Expect = 1.24e-154
Identity = 224/227 (98.68%), Postives = 225/227 (99.12%), Query Frame = 0


Query: 64  MDLRDNSERCLLAVDADEGEEGIEGGSLESPAGTELNDCDGDIILEPYEGMEFESEDAAK 123
           MDLRDNSERCLLAVDADEGEEGIEGGSLESPAGTELNDCDGDIILEPYEGMEFESEDAAK
Sbjct: 1   MDLRDNSERCLLAVDADEGEEGIEGGSLESPAGTELNDCDGDIILEPYEGMEFESEDAAK 60

Query: 124 IFYDKYARQLGFVMRVMSCRRSEKDGRILARRLGCNKEGHCVSIRGKFGAVRKPRPSTRE 183
           IFYDKYARQLGFVMRVMSCRRSEKDGRILARRLGCNKEGHCVSIRGKFGAVRKPRPSTRE
Sbjct: 61  IFYDKYARQLGFVMRVMSCRRSEKDGRILARRLGCNKEGHCVSIRGKFGAVRKPRPSTRE 120

Query: 184 GCKAMIHVKYDKSGKWVITKFVKEHNHPLVVSPREARQTMDEKDKQIQELTIELRNKKRL 243
           GCKAMIHVKYDKSGKWVITKFVKEHNHPLVVS REARQTMDEKDKQIQELTIELRNKKRL
Sbjct: 121 GCKAMIHVKYDKSGKWVITKFVKEHNHPLVVSAREARQTMDEKDKQIQELTIELRNKKRL 180

Query: 244 CSTYQEQLAAFMKIVEEHTDQLSKKVQNVVTNLKEFESIEQELLHPR 290
           CSTYQEQLAAFMKIVEEHTDQLS+KVQNVVTNLKEFESIEQELLH R
Sbjct: 181 CSTYQEQLAAFMKIVEEHTDQLSRKVQNVVTNLKEFESIEQELLHLR 227

[Close]

BLAST of Cucsat.G13169.T6 vs. NCBI nr
Match: XP_022154282.1 (protein FAR1-RELATED SEQUENCE 5 [Momordica charantia])

HSP 1 Score: 434 bits (1115), Expect = 6.86e-152
Identity = 219/227 (96.48%), Postives = 223/227 (98.24%), Query Frame = 0


Query: 64  MDLRDNSERCLLAVDADEGEEGIEGGSLESPAGTELNDCDGDIILEPYEGMEFESEDAAK 123
           MDLRDNSERCLL VDADEGEEGIEGGS ESPAGTEL +CDGDIILEPYEGMEFESED AK
Sbjct: 1   MDLRDNSERCLLTVDADEGEEGIEGGSFESPAGTELIECDGDIILEPYEGMEFESEDDAK 60

Query: 124 IFYDKYARQLGFVMRVMSCRRSEKDGRILARRLGCNKEGHCVSIRGKFGAVRKPRPSTRE 183
           IFYDKYARQ+GFVMRVMSCRRSEKDGRILARRLGCNKEG+CVSIRGKFGAVRKPRPSTRE
Sbjct: 61  IFYDKYARQVGFVMRVMSCRRSEKDGRILARRLGCNKEGYCVSIRGKFGAVRKPRPSTRE 120

Query: 184 GCKAMIHVKYDKSGKWVITKFVKEHNHPLVVSPREARQTMDEKDKQIQELTIELRNKKRL 243
           GCKAMIHVKYDKSGKWVITKFVKEHNHPLVVSPREARQTMDEKDKQIQELTIELRNKKRL
Sbjct: 121 GCKAMIHVKYDKSGKWVITKFVKEHNHPLVVSPREARQTMDEKDKQIQELTIELRNKKRL 180

Query: 244 CSTYQEQLAAFMKIVEEHTDQLSKKVQNVVTNLKEFESIEQELLHPR 290
           CSTYQEQLAAFMKIVEEHTDQLS+KVQNVVTNLKEFESIEQELLHPR
Sbjct: 181 CSTYQEQLAAFMKIVEEHTDQLSRKVQNVVTNLKEFESIEQELLHPR 227

[Close]

BLAST of Cucsat.G13169.T6 vs. NCBI nr
Match: XP_038905874.1 (protein FAR1-RELATED SEQUENCE 2 isoform X1 [Benincasa hispida] >XP_038905875.1 protein FAR1-RELATED SEQUENCE 2 isoform X1 [Benincasa hispida])

HSP 1 Score: 431 bits (1109), Expect = 5.63e-151
Identity = 218/227 (96.04%), Postives = 222/227 (97.80%), Query Frame = 0


Query: 64  MDLRDNSERCLLAVDADEGEEGIEGGSLESPAGTELNDCDGDIILEPYEGMEFESEDAAK 123
           MDLRDNSERCLL VDADEGEEGIEGGS ESPAGT+L +CDGDIILEPYEGMEFESEDAAK
Sbjct: 1   MDLRDNSERCLLTVDADEGEEGIEGGSFESPAGTQLIECDGDIILEPYEGMEFESEDAAK 60

Query: 124 IFYDKYARQLGFVMRVMSCRRSEKDGRILARRLGCNKEGHCVSIRGKFGAVRKPRPSTRE 183
           IFYDKYARQLGFVMRVMSCRRSEKDGRILARRLGCNKEG+CVSIRGKFGAVRKPRPSTRE
Sbjct: 61  IFYDKYARQLGFVMRVMSCRRSEKDGRILARRLGCNKEGYCVSIRGKFGAVRKPRPSTRE 120

Query: 184 GCKAMIHVKYDKSGKWVITKFVKEHNHPLVVSPREARQTMDEKDKQIQELTIELRNKKRL 243
           GCKAMIHVKYDKSG WVITKFVKEHNHPLVVSPREARQTMDEKDKQIQELTIELRNKKRL
Sbjct: 121 GCKAMIHVKYDKSGTWVITKFVKEHNHPLVVSPREARQTMDEKDKQIQELTIELRNKKRL 180

Query: 244 CSTYQEQLAAFMKIVEEHTDQLSKKVQNVVTNLKEFESIEQELLHPR 290
           CSTYQEQLAAFMKIVEEHTDQLS+KVQ VVTNLKEFESIEQELLHPR
Sbjct: 181 CSTYQEQLAAFMKIVEEHTDQLSRKVQKVVTNLKEFESIEQELLHPR 227

[Close]

BLAST of Cucsat.G13169.T6 vs. NCBI nr
Match: XP_023526121.1 (protein FAR1-RELATED SEQUENCE 5-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_023526122.1 protein FAR1-RELATED SEQUENCE 5-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_023526123.1 protein FAR1-RELATED SEQUENCE 5-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 428 bits (1100), Expect = 1.32e-149
Identity = 217/227 (95.59%), Postives = 222/227 (97.80%), Query Frame = 0


Query: 64  MDLRDNSERCLLAVDADEGEEGIEGGSLESPAGTELNDCDGDIILEPYEGMEFESEDAAK 123
           MDLRDNSERC+L VDAD GEEGIEGGS ESPAGTEL + DGDIILEPYEGMEFESEDAAK
Sbjct: 1   MDLRDNSERCVLTVDADAGEEGIEGGSFESPAGTELIEGDGDIILEPYEGMEFESEDAAK 60

Query: 124 IFYDKYARQLGFVMRVMSCRRSEKDGRILARRLGCNKEGHCVSIRGKFGAVRKPRPSTRE 183
           IFYDKYARQ+GFVMRVMSCRRSEKDGRILARRLGCNKEG+CVSIRGKFGAVRKPRPSTRE
Sbjct: 61  IFYDKYARQVGFVMRVMSCRRSEKDGRILARRLGCNKEGYCVSIRGKFGAVRKPRPSTRE 120

Query: 184 GCKAMIHVKYDKSGKWVITKFVKEHNHPLVVSPREARQTMDEKDKQIQELTIELRNKKRL 243
           GCKAMIHVKYDKSGKWVITKFVKEHNHPLVVSPREARQTMDEKDKQIQELTIELRNKKRL
Sbjct: 121 GCKAMIHVKYDKSGKWVITKFVKEHNHPLVVSPREARQTMDEKDKQIQELTIELRNKKRL 180

Query: 244 CSTYQEQLAAFMKIVEEHTDQLSKKVQNVVTNLKEFESIEQELLHPR 290
           CSTYQEQLAAFMKIVEEHTDQLS+KVQNVVTNLKEFESIEQELLHPR
Sbjct: 181 CSTYQEQLAAFMKIVEEHTDQLSRKVQNVVTNLKEFESIEQELLHPR 227

[Close]

BLAST of Cucsat.G13169.T6 vs. ExPASy TrEMBL
Match: A0A1S3B7B4 (protein FAR1-RELATED SEQUENCE 5 OS=Cucumis melo OX=3656 GN=LOC103486797 PE=4 SV=1)

HSP 1 Score: 441 bits (1133), Expect = 6.02e-155
Identity = 224/227 (98.68%), Postives = 225/227 (99.12%), Query Frame = 0


Query: 64  MDLRDNSERCLLAVDADEGEEGIEGGSLESPAGTELNDCDGDIILEPYEGMEFESEDAAK 123
           MDLRDNSERCLLAVDADEGEEGIEGGSLESPAGTELNDCDGDIILEPYEGMEFESEDAAK
Sbjct: 1   MDLRDNSERCLLAVDADEGEEGIEGGSLESPAGTELNDCDGDIILEPYEGMEFESEDAAK 60

Query: 124 IFYDKYARQLGFVMRVMSCRRSEKDGRILARRLGCNKEGHCVSIRGKFGAVRKPRPSTRE 183
           IFYDKYARQLGFVMRVMSCRRSEKDGRILARRLGCNKEGHCVSIRGKFGAVRKPRPSTRE
Sbjct: 61  IFYDKYARQLGFVMRVMSCRRSEKDGRILARRLGCNKEGHCVSIRGKFGAVRKPRPSTRE 120

Query: 184 GCKAMIHVKYDKSGKWVITKFVKEHNHPLVVSPREARQTMDEKDKQIQELTIELRNKKRL 243
           GCKAMIHVKYDKSGKWVITKFVKEHNHPLVVS REARQTMDEKDKQIQELTIELRNKKRL
Sbjct: 121 GCKAMIHVKYDKSGKWVITKFVKEHNHPLVVSAREARQTMDEKDKQIQELTIELRNKKRL 180

Query: 244 CSTYQEQLAAFMKIVEEHTDQLSKKVQNVVTNLKEFESIEQELLHPR 290
           CSTYQEQLAAFMKIVEEHTDQLS+KVQNVVTNLKEFESIEQELLH R
Sbjct: 181 CSTYQEQLAAFMKIVEEHTDQLSRKVQNVVTNLKEFESIEQELLHLR 227

[Close]

BLAST of Cucsat.G13169.T6 vs. ExPASy TrEMBL
Match: A0A6J1DLA3 (protein FAR1-RELATED SEQUENCE 5 OS=Momordica charantia OX=3673 GN=LOC111021572 PE=4 SV=1)

HSP 1 Score: 434 bits (1115), Expect = 3.32e-152
Identity = 219/227 (96.48%), Postives = 223/227 (98.24%), Query Frame = 0


Query: 64  MDLRDNSERCLLAVDADEGEEGIEGGSLESPAGTELNDCDGDIILEPYEGMEFESEDAAK 123
           MDLRDNSERCLL VDADEGEEGIEGGS ESPAGTEL +CDGDIILEPYEGMEFESED AK
Sbjct: 1   MDLRDNSERCLLTVDADEGEEGIEGGSFESPAGTELIECDGDIILEPYEGMEFESEDDAK 60

Query: 124 IFYDKYARQLGFVMRVMSCRRSEKDGRILARRLGCNKEGHCVSIRGKFGAVRKPRPSTRE 183
           IFYDKYARQ+GFVMRVMSCRRSEKDGRILARRLGCNKEG+CVSIRGKFGAVRKPRPSTRE
Sbjct: 61  IFYDKYARQVGFVMRVMSCRRSEKDGRILARRLGCNKEGYCVSIRGKFGAVRKPRPSTRE 120

Query: 184 GCKAMIHVKYDKSGKWVITKFVKEHNHPLVVSPREARQTMDEKDKQIQELTIELRNKKRL 243
           GCKAMIHVKYDKSGKWVITKFVKEHNHPLVVSPREARQTMDEKDKQIQELTIELRNKKRL
Sbjct: 121 GCKAMIHVKYDKSGKWVITKFVKEHNHPLVVSPREARQTMDEKDKQIQELTIELRNKKRL 180

Query: 244 CSTYQEQLAAFMKIVEEHTDQLSKKVQNVVTNLKEFESIEQELLHPR 290
           CSTYQEQLAAFMKIVEEHTDQLS+KVQNVVTNLKEFESIEQELLHPR
Sbjct: 181 CSTYQEQLAAFMKIVEEHTDQLSRKVQNVVTNLKEFESIEQELLHPR 227

[Close]

BLAST of Cucsat.G13169.T6 vs. ExPASy TrEMBL
Match: A0A6J1F5F7 (protein FAR1-RELATED SEQUENCE 5-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111442478 PE=4 SV=1)

HSP 1 Score: 426 bits (1094), Expect = 5.25e-149
Identity = 216/227 (95.15%), Postives = 221/227 (97.36%), Query Frame = 0


Query: 64  MDLRDNSERCLLAVDADEGEEGIEGGSLESPAGTELNDCDGDIILEPYEGMEFESEDAAK 123
           MDLRDNSERC+L VDAD GEEGIEGGS ESPAGTEL + DGDIILEPYEGMEFESEDAAK
Sbjct: 1   MDLRDNSERCVLTVDADAGEEGIEGGSFESPAGTELIEGDGDIILEPYEGMEFESEDAAK 60

Query: 124 IFYDKYARQLGFVMRVMSCRRSEKDGRILARRLGCNKEGHCVSIRGKFGAVRKPRPSTRE 183
           IFYDKYARQ+GFVMRVMSCRRSEKDGRILARRLGCNKEG+CVSIRGKFGAVRKPRPSTRE
Sbjct: 61  IFYDKYARQVGFVMRVMSCRRSEKDGRILARRLGCNKEGYCVSIRGKFGAVRKPRPSTRE 120

Query: 184 GCKAMIHVKYDKSGKWVITKFVKEHNHPLVVSPREARQTMDEKDKQIQELTIELRNKKRL 243
           GCKAMIHVKYDK GKWVITKFVKEHNHPLVVSPREARQTMDEKDKQIQELTIELRNKKRL
Sbjct: 121 GCKAMIHVKYDKFGKWVITKFVKEHNHPLVVSPREARQTMDEKDKQIQELTIELRNKKRL 180

Query: 244 CSTYQEQLAAFMKIVEEHTDQLSKKVQNVVTNLKEFESIEQELLHPR 290
           CSTYQEQLAAFMKIVEEHTDQLS+KVQNVVTNLKEFESIEQELLHPR
Sbjct: 181 CSTYQEQLAAFMKIVEEHTDQLSRKVQNVVTNLKEFESIEQELLHPR 227

[Close]

BLAST of Cucsat.G13169.T6 vs. ExPASy TrEMBL
Match: A0A6J1IYB6 (protein FAR1-RELATED SEQUENCE 5-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111481745 PE=4 SV=1)

HSP 1 Score: 424 bits (1091), Expect = 1.50e-148
Identity = 216/227 (95.15%), Postives = 221/227 (97.36%), Query Frame = 0


Query: 64  MDLRDNSERCLLAVDADEGEEGIEGGSLESPAGTELNDCDGDIILEPYEGMEFESEDAAK 123
           MDLRDNSERC+L VDAD  EEGIEGGS ESPAGTEL + DGDIILEPYEGMEFESEDAAK
Sbjct: 1   MDLRDNSERCVLTVDADAVEEGIEGGSFESPAGTELIEGDGDIILEPYEGMEFESEDAAK 60

Query: 124 IFYDKYARQLGFVMRVMSCRRSEKDGRILARRLGCNKEGHCVSIRGKFGAVRKPRPSTRE 183
           IFYDKYARQ+GFVMRVMSCRRSEKDGRILARRLGCNKEG+CVSIRGKFGAVRKPRPSTRE
Sbjct: 61  IFYDKYARQVGFVMRVMSCRRSEKDGRILARRLGCNKEGYCVSIRGKFGAVRKPRPSTRE 120

Query: 184 GCKAMIHVKYDKSGKWVITKFVKEHNHPLVVSPREARQTMDEKDKQIQELTIELRNKKRL 243
           GCKAMIHVKYDKSGKWVITKFVKEHNHPLVVSPREARQTMDEKDKQIQELTIELRNKKRL
Sbjct: 121 GCKAMIHVKYDKSGKWVITKFVKEHNHPLVVSPREARQTMDEKDKQIQELTIELRNKKRL 180

Query: 244 CSTYQEQLAAFMKIVEEHTDQLSKKVQNVVTNLKEFESIEQELLHPR 290
           CSTYQEQLAAFMKIVEEHTDQLS+KVQNVVTNLKEFESIEQELLHPR
Sbjct: 181 CSTYQEQLAAFMKIVEEHTDQLSRKVQNVVTNLKEFESIEQELLHPR 227

[Close]

BLAST of Cucsat.G13169.T6 vs. ExPASy TrEMBL
Match: A0A6J1J157 (protein FAR1-RELATED SEQUENCE 5-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111481745 PE=4 SV=1)

HSP 1 Score: 424 bits (1091), Expect = 1.80e-148
Identity = 216/227 (95.15%), Postives = 221/227 (97.36%), Query Frame = 0


Query: 64  MDLRDNSERCLLAVDADEGEEGIEGGSLESPAGTELNDCDGDIILEPYEGMEFESEDAAK 123
           MDLRDNSERC+L VDAD  EEGIEGGS ESPAGTEL + DGDIILEPYEGMEFESEDAAK
Sbjct: 6   MDLRDNSERCVLTVDADAVEEGIEGGSFESPAGTELIEGDGDIILEPYEGMEFESEDAAK 65

Query: 124 IFYDKYARQLGFVMRVMSCRRSEKDGRILARRLGCNKEGHCVSIRGKFGAVRKPRPSTRE 183
           IFYDKYARQ+GFVMRVMSCRRSEKDGRILARRLGCNKEG+CVSIRGKFGAVRKPRPSTRE
Sbjct: 66  IFYDKYARQVGFVMRVMSCRRSEKDGRILARRLGCNKEGYCVSIRGKFGAVRKPRPSTRE 125

Query: 184 GCKAMIHVKYDKSGKWVITKFVKEHNHPLVVSPREARQTMDEKDKQIQELTIELRNKKRL 243
           GCKAMIHVKYDKSGKWVITKFVKEHNHPLVVSPREARQTMDEKDKQIQELTIELRNKKRL
Sbjct: 126 GCKAMIHVKYDKSGKWVITKFVKEHNHPLVVSPREARQTMDEKDKQIQELTIELRNKKRL 185

Query: 244 CSTYQEQLAAFMKIVEEHTDQLSKKVQNVVTNLKEFESIEQELLHPR 290
           CSTYQEQLAAFMKIVEEHTDQLS+KVQNVVTNLKEFESIEQELLHPR
Sbjct: 186 CSTYQEQLAAFMKIVEEHTDQLSRKVQNVVTNLKEFESIEQELLHPR 232

The following BLAST results are available for this feature:

BLAST of Cucsat.G13169.T6 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SZL8	1.3e-24	37.80	Protein FAR1-RELATED SEQUENCE 5 OS=Arabidopsis thaliana OX=3702 GN=FRS5 PE=1 SV=...	[more]
Q9SWG3	1.4e-15	36.36	Protein FAR-RED IMPAIRED RESPONSE 1 OS=Arabidopsis thaliana OX=3702 GN=FAR1 PE=1...	[more]
Q3EBQ3	2.4e-15	33.91	Protein FAR1-RELATED SEQUENCE 2 OS=Arabidopsis thaliana OX=3702 GN=FRS2 PE=1 SV=...	[more]
Q9LIE5	1.3e-13	35.46	Protein FAR-RED ELONGATED HYPOCOTYL 3 OS=Arabidopsis thaliana OX=3702 GN=FHY3 PE...	[more]
Q9ZVC9	1.5e-12	34.56	Protein FAR1-RELATED SEQUENCE 3 OS=Arabidopsis thaliana OX=3702 GN=FRS3 PE=1 SV=...	[more]

BLAST of Cucsat.G13169.T6 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004136586.3	7.85e-158	100.00	protein FAR1-RELATED SEQUENCE 5 [Cucumis sativus] >XP_011652117.2 protein FAR1-R...	[more]
XP_008443098.1	1.24e-154	98.68	PREDICTED: protein FAR1-RELATED SEQUENCE 5 [Cucumis melo]	[more]
XP_022154282.1	6.86e-152	96.48	protein FAR1-RELATED SEQUENCE 5 [Momordica charantia]	[more]
XP_038905874.1	5.63e-151	96.04	protein FAR1-RELATED SEQUENCE 2 isoform X1 [Benincasa hispida] >XP_038905875.1 p...	[more]
XP_023526121.1	1.32e-149	95.59	protein FAR1-RELATED SEQUENCE 5-like isoform X1 [Cucurbita pepo subsp. pepo] >XP...	[more]

BLAST of Cucsat.G13169.T6 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3B7B4	6.02e-155	98.68	protein FAR1-RELATED SEQUENCE 5 OS=Cucumis melo OX=3656 GN=LOC103486797 PE=4 SV=...	[more]
A0A6J1DLA3	3.32e-152	96.48	protein FAR1-RELATED SEQUENCE 5 OS=Momordica charantia OX=3673 GN=LOC111021572 P...	[more]
A0A6J1F5F7	5.25e-149	95.15	protein FAR1-RELATED SEQUENCE 5-like isoform X1 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1IYB6	1.50e-148	95.15	protein FAR1-RELATED SEQUENCE 5-like isoform X2 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1J157	1.80e-148	95.15	protein FAR1-RELATED SEQUENCE 5-like isoform X1 OS=Cucurbita maxima OX=3661 GN=L...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 223..250
None	No IPR available	PANTHER	PTHR46328	FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED	coord: 80..289
None	No IPR available	PANTHER	PTHR46328:SF17	FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN	coord: 80..289
IPR004330	FAR1 DNA binding domain	PFAM	PF03101	FAR1	coord: 125..213 e-value: 3.0E-28 score: 98.4

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cucsat.G13169	Cucsat.G13169	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsat.G13169.T6.E1	Cucsat.G13169.T6.E1	exon
Cucsat.G13169.T6.E2	Cucsat.G13169.T6.E2	exon
Cucsat.G13169.T6.E3	Cucsat.G13169.T6.E3	exon
Cucsat.G13169.T6.E4	Cucsat.G13169.T6.E4	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsat.G13169.T6.C1	Cucsat.G13169.T6.C1	CDS
Cucsat.G13169.T6.C2	Cucsat.G13169.T6.C2	CDS
Cucsat.G13169.T6.C3	Cucsat.G13169.T6.C3	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cucsat.G13169.T6	Cucsat.G13169.T6-protein	polypeptide