Homology
BLAST of Sed0017755.1 vs. NCBI nr
Match:
XP_038881482.1 (U1 small nuclear ribonucleoprotein 70 kDa [Benincasa hispida])
HSP 1 Score: 802.4 bits (2071), Expect = 2.2e-228
Identity = 440/508 (86.61%), Postives = 466/508 (91.73%), Query Frame = 0
Query: 1 MGDYNDAFMRNQNAAVQARTKAQNRASVLQLKLIGQSHPTGLTNNLLKLFEPRPPLEFKP 60
MGDYNDAFMRNQNAAVQARTKAQNRA+VLQLKLIGQSHPTGLT NLLKLFEPRPPLEFKP
Sbjct: 1 MGDYNDAFMRNQNAAVQARTKAQNRANVLQLKLIGQSHPTGLTANLLKLFEPRPPLEFKP 60
Query: 61 PPEKRKCPPLLGMAQFVSHFAEPGDPEYAPPIQKGETPAQRKARIHLLKIEKGAEKVAEE 120
PPEKRKCPPL GMAQFVS FAEP DPEYAPP+QKGETPA+R+ARIHLL+IEKGAEK AEE
Sbjct: 61 PPEKRKCPPLTGMAQFVSSFAEPDDPEYAPPVQKGETPAERRARIHLLRIEKGAEKAAEE 120
Query: 121 LPKYLERDDPNVTGDPYKTLFVARLNYETTESRIKRELESYGPIKRVRLITDEVTGKPKG 180
LPKYLERDDPNVTGDPYKTLFVARLNYETTESRIKRE ESYGPIKRVRLITD+VTGKPKG
Sbjct: 121 LPKYLERDDPNVTGDPYKTLFVARLNYETTESRIKREFESYGPIKRVRLITDKVTGKPKG 180
Query: 181 YAFIEYMHKRDMKSAYKQADGKKIDGRRVLVDVERGRTVPNWRPRRLGGGLGTSRVGGED 240
YAFIEYMHKRDMK+AYKQADG+KIDGRRVLVDVERGRTVPNWRPRRLGGGLGT+RVGGE+
Sbjct: 181 YAFIEYMHKRDMKAAYKQADGRKIDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEE 240
Query: 241 NNQRHSGREQQQSGAPSRSEEPRAREDRHGERDREKSYEKGRDRE------REKSHERSK 300
N+QRHSGREQQQ+GAPSRSEEPRAREDRH ERDREKSY+KGRDRE RE+SHERSK
Sbjct: 241 NSQRHSGREQQQAGAPSRSEEPRAREDRHAERDREKSYDKGRDRERDREKSRERSHERSK 300
Query: 301 DRDAREDKPHRDRDRTRDRDRDRDRERERDRDRTRDRDRGRDRG--------RDRERHRD 360
DRD RED+ HRDRDRTRDRDRDRDRER+R DR R RDRGRDRG RDR+RHRD
Sbjct: 301 DRDVREDRHHRDRDRTRDRDRDRDRERDRGYDRDRTRDRGRDRGRDHDRDRDRDRDRHRD 360
Query: 361 RDRE--RDRDHDGGYADPDRGRSHDRESNYDRVESKYEKDRHGDRDRDIDHAETEDGHGW 420
RDRE RDRDH+GGY DPDRGRSHDR+ +YDR+ESKYEKDRHGDRDRDIDHAETEDG GW
Sbjct: 361 RDRERDRDRDHEGGYPDPDRGRSHDRD-DYDRIESKYEKDRHGDRDRDIDHAETEDGRGW 420
Query: 421 YDQPEHGQRHPDTDHDPQYNDHFEHSRSRGQHDHPEDHRDEDRYDQNDRMEEDDYHYERG 480
YDQPEHG RHPDTDHDPQY DHFEH+RSRGQ+DH E HRD+DRYDQ D EDDY YERG
Sbjct: 421 YDQPEHGHRHPDTDHDPQYYDHFEHNRSRGQYDHSEGHRDQDRYDQYDDRMEDDYPYERG 480
Query: 481 TSESRDRERSRDLNHEYRRSERSHSREH 493
TSES DRERSRDLNHEY+RSERSHSRE+
Sbjct: 481 TSESHDRERSRDLNHEYKRSERSHSREY 507
BLAST of Sed0017755.1 vs. NCBI nr
Match:
XP_022132461.1 (U1 small nuclear ribonucleoprotein 70 kDa [Momordica charantia])
HSP 1 Score: 801.2 bits (2068), Expect = 5.0e-228
Identity = 440/511 (86.11%), Postives = 469/511 (91.78%), Query Frame = 0
Query: 1 MGDYNDAFMRNQNAAVQARTKAQNRASVLQLKLIGQSHPTGLTNNLLKLFEPRPPLEFKP 60
MGDYNDAFMRNQNAAVQARTKAQNRA+VLQLKLIGQSHPTGLT NLLKLFEPRPPLE+KP
Sbjct: 1 MGDYNDAFMRNQNAAVQARTKAQNRANVLQLKLIGQSHPTGLTANLLKLFEPRPPLEYKP 60
Query: 61 PPEKRKCPPLLGMAQFVSHFAEPGDPEYAPPIQKGETPAQRKARIHLLKIEKGAEKVAEE 120
PPEKRKCPPL GMAQFVS+FAEP DPEYAPP+QKGETPAQR+ARIHLL+IEKGAEK AEE
Sbjct: 61 PPEKRKCPPLTGMAQFVSNFAEPDDPEYAPPVQKGETPAQRRARIHLLRIEKGAEKAAEE 120
Query: 121 LPKYLERDDPNVTGDPYKTLFVARLNYETTESRIKRELESYGPIKRVRLITDEVTGKPKG 180
LPKYLERDDPNVTGDPYKTLFVARLNYETTESRIKRE ESYGPIKRVRLITD+VTGKPKG
Sbjct: 121 LPKYLERDDPNVTGDPYKTLFVARLNYETTESRIKREFESYGPIKRVRLITDKVTGKPKG 180
Query: 181 YAFIEYMHKRDMKSAYKQADGKKIDGRRVLVDVERGRTVPNWRPRRLGGGLGTSRVGGED 240
YAFIEYMHKRDMK+AYKQADG+KIDGRRVLVDVERGRTVPNWRPRRLGGGLGT+RVGGE+
Sbjct: 181 YAFIEYMHKRDMKAAYKQADGRKIDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEE 240
Query: 241 NNQRHSGREQQQSGAPSRSEEPRAREDRHGERDREKSYEKGRDRE------REKSHERSK 300
NNQRHSGREQQQSGAPSRSEEPR REDRHGERDREKS+EKGRDRE RE+SHERSK
Sbjct: 241 NNQRHSGREQQQSGAPSRSEEPRGREDRHGERDREKSHEKGRDREREREKSRERSHERSK 300
Query: 301 DRDAREDKPHRDRDRTRDRDRDRDRERER----DRDRTRDRDRGRDRG--------RDRE 360
DRD RED+ HRDRDRTRDRDRDR+RERER DRD+TRDRDRGRDRG RDR+
Sbjct: 301 DRDLREDRHHRDRDRTRDRDRDRERERERDRGYDRDKTRDRDRGRDRGRDYERDRDRDRD 360
Query: 361 RHRDRDRERDRDHDGGYADPDRGRSHDRESNYDRVESKYEKDRHGDRDRDIDHAETEDGH 420
RHRDRDRERDR+H+ GY +PDRGRSHDRES+YDRVESKYEKDRHGDRDR+ID ETEDG
Sbjct: 361 RHRDRDRERDRNHEDGYPEPDRGRSHDRESDYDRVESKYEKDRHGDRDREIDRTETEDGR 420
Query: 421 GWYDQPEHGQRHPDTDHDPQYNDHFEHSRSRGQH-DHPEDHRDEDRYDQNDRMEEDDYHY 480
GWYDQ EHG RHPD DHDPQY DHFEH+R RGQ+ D+PE H D+DRYDQ DRM EDDYHY
Sbjct: 421 GWYDQSEHGHRHPDPDHDPQYYDHFEHNRGRGQYDDNPEGHHDQDRYDQYDRM-EDDYHY 480
Query: 481 ERGTSESRDRERSRDLNHEYRRSERSHSREH 493
ERGTSES D+ERSRD+NHEYRRSERSHSRE+
Sbjct: 481 ERGTSESHDKERSRDMNHEYRRSERSHSREY 510
BLAST of Sed0017755.1 vs. NCBI nr
Match:
XP_023517571.1 (U1 small nuclear ribonucleoprotein 70 kDa-like [Cucurbita pepo subsp. pepo] >XP_023517572.1 U1 small nuclear ribonucleoprotein 70 kDa-like [Cucurbita pepo subsp. pepo])
HSP 1 Score: 800.0 bits (2065), Expect = 1.1e-227
Identity = 439/513 (85.58%), Postives = 473/513 (92.20%), Query Frame = 0
Query: 1 MGDYNDAFMRNQNAAVQARTKAQNRASVLQLKLIGQSHPTGLTNNLLKLFEPRPPLEFKP 60
MGDYNDAFMRNQNAAVQARTKAQNRA+VLQLKLIGQSHPTGLT NLLKLFEPRPPLE+KP
Sbjct: 1 MGDYNDAFMRNQNAAVQARTKAQNRANVLQLKLIGQSHPTGLTANLLKLFEPRPPLEYKP 60
Query: 61 PPEKRKCPPLLGMAQFVSHFAEPGDPEYAPPIQKGETPAQRKARIHLLKIEKGAEKVAEE 120
PPEKRKCPPL GMAQFVSHFAEP DPEYAPP+Q+GETP+QR+ARIHLL+IEKGA+K AEE
Sbjct: 61 PPEKRKCPPLTGMAQFVSHFAEPDDPEYAPPVQEGETPSQRRARIHLLRIEKGAQKAAEE 120
Query: 121 LPKYLERDDPNVTGDPYKTLFVARLNYETTESRIKRELESYGPIKRVRLITDEVTGKPKG 180
LPKYLERDDPNVTGDPYKTLFVARLNYET+ESRIKRE ESYGPIKRVRLITD+VTGKPKG
Sbjct: 121 LPKYLERDDPNVTGDPYKTLFVARLNYETSESRIKREFESYGPIKRVRLITDKVTGKPKG 180
Query: 181 YAFIEYMHKRDMKSAYKQADGKKIDGRRVLVDVERGRTVPNWRPRRLGGGLGTSRVGGED 240
YAFIEYMHKRDMK+AYKQADG+KIDGRRVLVDVERGRTVPNWRPRRLGGGLGT+RVGGE+
Sbjct: 181 YAFIEYMHKRDMKAAYKQADGRKIDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEE 240
Query: 241 NNQRHSGREQQQSGAPSRSEEPRAREDRHGERDREKSYEKGRDRE------REKSHERSK 300
N+QRH+GREQQQSGAPSRSEEPRAREDRHGERDREKSYEKGRDRE RE+SH+RSK
Sbjct: 241 NSQRHAGREQQQSGAPSRSEEPRAREDRHGERDREKSYEKGRDREREREKSRERSHDRSK 300
Query: 301 DRDAREDKPHRDRDRTRDRDRDRDRERER------DRDRTRDRDRGRDRG--------RD 360
DRD RED+ HRDRDRTRDRDRDR++ERER DRDRTRDRDRGRDRG RD
Sbjct: 301 DRDLREDRHHRDRDRTRDRDRDREKERERERDRGHDRDRTRDRDRGRDRGRDYERDRDRD 360
Query: 361 RERHRDRDRERDRDHDGGYADPDRGRSHDRESNYDRVESKYEKDRHGDRDRDIDHAETED 420
R+RHRDRDRER+RDH+GGYADPDRGRSHDRES+YDRV+SKYEKDRHGDR++DID ETED
Sbjct: 361 RDRHRDRDRERERDHEGGYADPDRGRSHDRESDYDRVDSKYEKDRHGDREKDIDPGETED 420
Query: 421 GHGWYDQPEHGQRH-PDTDHDPQYNDHFEHSRSRGQHDHPEDHRDEDRYDQNDRMEEDDY 480
GHGWYDQP HG RH PDTDHDPQY DHFEH+RSR Q+DHPE H +DRYDQ DRM EDDY
Sbjct: 421 GHGWYDQPAHGHRHPPDTDHDPQYYDHFEHNRSREQYDHPE-HHGQDRYDQYDRM-EDDY 480
Query: 481 HYERGTSESRDRERSRDLNHEYRRSERSHSREH 493
YERGTSE+RDRERSRDLNHEYRR+ERSHSRE+
Sbjct: 481 RYERGTSETRDRERSRDLNHEYRRTERSHSREY 511
BLAST of Sed0017755.1 vs. NCBI nr
Match:
XP_023003041.1 (U1 small nuclear ribonucleoprotein 70 kDa-like [Cucurbita maxima] >XP_023003042.1 U1 small nuclear ribonucleoprotein 70 kDa-like [Cucurbita maxima] >XP_023003043.1 U1 small nuclear ribonucleoprotein 70 kDa-like [Cucurbita maxima] >XP_023003044.1 U1 small nuclear ribonucleoprotein 70 kDa-like [Cucurbita maxima])
HSP 1 Score: 798.5 bits (2061), Expect = 3.2e-227
Identity = 439/512 (85.74%), Postives = 470/512 (91.80%), Query Frame = 0
Query: 1 MGDYNDAFMRNQNAAVQARTKAQNRASVLQLKLIGQSHPTGLTNNLLKLFEPRPPLEFKP 60
MGDYNDAFMRNQNAAVQARTKAQNRA+VLQLKLIGQSHPTGLT NLLKLFEPRPPLE+KP
Sbjct: 1 MGDYNDAFMRNQNAAVQARTKAQNRANVLQLKLIGQSHPTGLTANLLKLFEPRPPLEYKP 60
Query: 61 PPEKRKCPPLLGMAQFVSHFAEPGDPEYAPPIQKGETPAQRKARIHLLKIEKGAEKVAEE 120
PPEKRKCPPL GMAQFVSHFAEP DPEYAPP+Q+GETP+QR+ARIHLL+IEKGA+K AEE
Sbjct: 61 PPEKRKCPPLTGMAQFVSHFAEPDDPEYAPPVQEGETPSQRRARIHLLRIEKGAQKAAEE 120
Query: 121 LPKYLERDDPNVTGDPYKTLFVARLNYETTESRIKRELESYGPIKRVRLITDEVTGKPKG 180
LPKYLERDDPNVTGDPYKTLFVARLNYET+ESRIKRE ESYGPIKRVRLITD+VTGKPKG
Sbjct: 121 LPKYLERDDPNVTGDPYKTLFVARLNYETSESRIKREFESYGPIKRVRLITDKVTGKPKG 180
Query: 181 YAFIEYMHKRDMKSAYKQADGKKIDGRRVLVDVERGRTVPNWRPRRLGGGLGTSRVGGED 240
YAFIEYMHKRDMK+AYKQADG+KIDGRRVLVDVERGRTVPNWRPRRLGGGLGT+RVGGE+
Sbjct: 181 YAFIEYMHKRDMKAAYKQADGRKIDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEE 240
Query: 241 NNQRHSGREQQQSGAPSRSEEPRAREDRHGERDREKSYEKGRDRE------REKSHERSK 300
N+QRH+GREQQQSGAPSRSEEPRAREDRHGERDREKSYEKGRDRE RE+SH+RSK
Sbjct: 241 NSQRHAGREQQQSGAPSRSEEPRAREDRHGERDREKSYEKGRDREREREKSRERSHDRSK 300
Query: 301 DRDAREDKPHRDRDRTRDRDRDRDRERER------DRDRTRDRDRGRDRG--------RD 360
D D RED+ HRDRDRTRDRDRDR++ERER DRDRTRDRDRGRDRG RD
Sbjct: 301 DHDLREDRHHRDRDRTRDRDRDREKERERERERGHDRDRTRDRDRGRDRGRDYERDRDRD 360
Query: 361 RERHRDRDRERDRDHDGGYADPDRGRSHDRESNYDRVESKYEKDRHGDRDRDIDHAETED 420
R+RHRDRDRERDRDH GGYADPDRGRSHDRES+YDRV+SKYEKDRHGDRD+DID ETED
Sbjct: 361 RDRHRDRDRERDRDHGGGYADPDRGRSHDRESDYDRVDSKYEKDRHGDRDKDIDPGETED 420
Query: 421 GHGWYDQPEHGQRH-PDTDHDPQYNDHFEHSRSRGQHDHPEDHRDEDRYDQNDRMEEDDY 480
GHGWYDQP HG RH PDTDHDPQY DHFEH+RSR Q+DHPE H +DRYDQ DRM EDDY
Sbjct: 421 GHGWYDQPVHGHRHPPDTDHDPQYYDHFEHNRSREQYDHPE-HHGQDRYDQYDRM-EDDY 480
Query: 481 HYERGTSESRDRERSRDLNHEYRRSERSHSRE 492
YERGTSE+RDRERSRDLNHEYRR++RSHSRE
Sbjct: 481 RYERGTSETRDRERSRDLNHEYRRADRSHSRE 510
BLAST of Sed0017755.1 vs. NCBI nr
Match:
XP_022962873.1 (U1 small nuclear ribonucleoprotein 70 kDa-like [Cucurbita moschata] >XP_022962874.1 U1 small nuclear ribonucleoprotein 70 kDa-like [Cucurbita moschata])
HSP 1 Score: 796.6 bits (2056), Expect = 1.2e-226
Identity = 437/512 (85.35%), Postives = 470/512 (91.80%), Query Frame = 0
Query: 1 MGDYNDAFMRNQNAAVQARTKAQNRASVLQLKLIGQSHPTGLTNNLLKLFEPRPPLEFKP 60
MGDYNDAFMRNQNAAVQARTKAQNRA+VLQLKLIGQSHPTGLT NLLKLFEPRPPLE+KP
Sbjct: 1 MGDYNDAFMRNQNAAVQARTKAQNRANVLQLKLIGQSHPTGLTANLLKLFEPRPPLEYKP 60
Query: 61 PPEKRKCPPLLGMAQFVSHFAEPGDPEYAPPIQKGETPAQRKARIHLLKIEKGAEKVAEE 120
PPEKRKCPPL GMAQFVSHFAEP DPEYAPP+Q+GETP+QR+ARIHLL+IEKGA+K EE
Sbjct: 61 PPEKRKCPPLTGMAQFVSHFAEPDDPEYAPPVQEGETPSQRRARIHLLRIEKGAQKAVEE 120
Query: 121 LPKYLERDDPNVTGDPYKTLFVARLNYETTESRIKRELESYGPIKRVRLITDEVTGKPKG 180
LPKYLERDDPNVTGDPYKTLFVARLNYET+ESRIKRE ESYGPIKRVRLITD+VTGKPKG
Sbjct: 121 LPKYLERDDPNVTGDPYKTLFVARLNYETSESRIKREFESYGPIKRVRLITDKVTGKPKG 180
Query: 181 YAFIEYMHKRDMKSAYKQADGKKIDGRRVLVDVERGRTVPNWRPRRLGGGLGTSRVGGED 240
YAFIEYMHKRDMK+AYKQADG+KIDGRRVLVDVERGRTVPNWRPRRLGGGLGT+RVGGE+
Sbjct: 181 YAFIEYMHKRDMKAAYKQADGRKIDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEE 240
Query: 241 NNQRHSGREQQQSGAPSRSEEPRAREDRHGERDREKSYEKGRDRE------REKSHERSK 300
N+QRH+GREQQQSGAPSRSEEPRAREDRHGERDREKSYEKGRDRE RE+SH+RSK
Sbjct: 241 NSQRHAGREQQQSGAPSRSEEPRAREDRHGERDREKSYEKGRDREREREKSRERSHDRSK 300
Query: 301 DRDAREDKPHRDRDRTRDRDRDRDRERER------DRDRTRDRDRGRDRG--------RD 360
DRD RED+ HRDRDRT DRDRDR++ERER DRDRTRDRDRGRDRG RD
Sbjct: 301 DRDLREDRHHRDRDRTIDRDRDREKERERERDRGHDRDRTRDRDRGRDRGRDYERDRDRD 360
Query: 361 RERHRDRDRERDRDHDGGYADPDRGRSHDRESNYDRVESKYEKDRHGDRDRDIDHAETED 420
R+RHRDRDRERDRDH+GG+ADPDRGRSHDRES+YDR++SKYEKDRHGDRD+DID ETED
Sbjct: 361 RDRHRDRDRERDRDHEGGFADPDRGRSHDRESDYDRIDSKYEKDRHGDRDKDIDPGETED 420
Query: 421 GHGWYDQPEHGQRH-PDTDHDPQYNDHFEHSRSRGQHDHPEDHRDEDRYDQNDRMEEDDY 480
GHGWYDQP HG RH PDTDHDPQY DHFEH+RSR Q+DHPE H +DRYDQ DRM EDDY
Sbjct: 421 GHGWYDQPAHGHRHPPDTDHDPQYYDHFEHNRSREQYDHPE-HHGQDRYDQYDRM-EDDY 480
Query: 481 HYERGTSESRDRERSRDLNHEYRRSERSHSRE 492
YERGTSE+RDRERSRDLNHEYRR+ERSHSRE
Sbjct: 481 RYERGTSETRDRERSRDLNHEYRRTERSHSRE 510
BLAST of Sed0017755.1 vs. ExPASy Swiss-Prot
Match:
Q42404 (U1 small nuclear ribonucleoprotein 70 kDa OS=Arabidopsis thaliana OX=3702 GN=RNU1 PE=1 SV=1)
HSP 1 Score: 436.4 bits (1121), Expect = 4.2e-121
Identity = 286/500 (57.20%), Postives = 338/500 (67.60%), Query Frame = 0
Query: 1 MGDYNDAFMRNQNAAVQARTKAQNRASVLQLKLIGQSHPTGLTNNLLKLFEPRPPLEFKP 60
MGD D F+RN NAAVQAR K QNRA+VLQLKL+GQSHPTGLTNNLLKLFEPRPPLE+KP
Sbjct: 1 MGDSGDPFLRNPNAAVQARAKVQNRANVLQLKLMGQSHPTGLTNNLLKLFEPRPPLEYKP 60
Query: 61 PPEKRKCPPLLGMAQFVSHFAEPGDPEYAPPIQKGETPAQRKARIHLLKIEKGAEKVAEE 120
PPEKRKCPP GMAQFVS+FAEPGDPEYAPP + E P+Q++ RIH L++EKG EK AE+
Sbjct: 61 PPEKRKCPPYTGMAQFVSNFAEPGDPEYAPPKPEVELPSQKRERIHKLRLEKGVEKAAED 120
Query: 121 LPKYLERDDPNVTGDPYKTLFVARLNYETTESRIKRELESYGPIKRVRLITDEVTGKPKG 180
L KY +DPN TGDPYKTLFV+RLNYE++ES+IKRE ESYGPIKRV L+TD++T KPKG
Sbjct: 121 LKKYDPNNDPNATGDPYKTLFVSRLNYESSESKIKREFESYGPIKRVHLVTDQLTNKPKG 180
Query: 181 YAFIEYMHKRDMKSAYKQADGKKIDGRRVLVDVERGRTVPNWRPRRLGGGLGTSRVGGED 240
YAFIEYMH RDMK+AYKQADG+KIDGRRVLVDVERGRTVPNWRPRRLGGGLGTSRVGG +
Sbjct: 181 YAFIEYMHTRDMKAAYKQADGQKIDGRRVLVDVERGRTVPNWRPRRLGGGLGTSRVGGGE 240
Query: 241 NNQRHSGREQQQSGAPSRSEEP-RAREDRHGERDREKSYEKGRDREREKSHERSKDRDAR 300
EQQ G S+SEEP R RE+R R++ K E+ R+ E+ ERS+DR R
Sbjct: 241 ----EIVGEQQPQGRTSQSEEPSRPREEREKSREKGKERERSRELSHEQPRERSRDR-PR 300
Query: 301 EDKPHRDRDR-TRDRDRDRDRERERDRDR----TRDRDRGRDRGRDRERHRDRDRERDRD 360
EDK HRDRD+ RDRDRD R+R+R RDR RDRDRGRDR R+ RDR R+++RD
Sbjct: 301 EDKHHRDRDQGGRDRDRDSRRDRDRTRDRGDRDRRDRDRGRDR-TSRDHDRDRSRKKERD 360
Query: 361 HDGG-YADPDRGRSHDRESNYDRVESKYEKDRHGDRDRDIDHAETEDGHGWYDQPEHGQR 420
++GG Y GRS +R++ Y E E+ G+Y+
Sbjct: 361 YEGGEYEHEGGGRSRERDAEY--------------------RGEPEETRGYYE------- 420
Query: 421 HPDTDHDPQYNDHFEHSRSRGQHDHPEDHRDEDRYDQN-DRMEEDDYHYERGTSESRDRE 480
+D D DRY D+MEEDD+ YER
Sbjct: 421 --------------------------DDQGDTDRYSHRYDKMEEDDFRYER--------- 425
Query: 481 RSRDLNHEYRRSERSHSREH 493
EY+RS+RS SRE+
Sbjct: 481 -------EYKRSKRSESREY 425
BLAST of Sed0017755.1 vs. ExPASy Swiss-Prot
Match:
Q66II8 (U1 small nuclear ribonucleoprotein 70 kDa OS=Xenopus tropicalis OX=8364 GN=snrnp70 PE=2 SV=1)
HSP 1 Score: 236.1 bits (601), Expect = 8.4e-61
Identity = 187/427 (43.79%), Postives = 257/427 (60.19%), Query Frame = 0
Query: 42 LTNNLLKLFEPRPPLEFKP-----PPEKRKCPPLLGMAQFVSHFAEPGDPEYAPPIQKGE 101
L NLL LF PR P+ + P P EK P G+A ++ F +P D APP + E
Sbjct: 5 LPPNLLALFAPRDPVPYLPPLDKLPHEKHHNQPYCGIAPYIREFEDPRD---APPPTRAE 64
Query: 102 TPAQRKARIHLLKIEKGAEKVAEELPKYLERDDPNVTGDPYKTLFVARLNYETTESRIKR 161
T +R R KIE+ + V EL + +D N GD +KTLFVAR+NY+TTES+++R
Sbjct: 65 TREERMERKRREKIERRQQDVENELKIWDPHNDQNAQGDAFKTLFVARVNYDTTESKLRR 124
Query: 162 ELESYGPIKRVRLITDEVTGKPKGYAFIEYMHKRDMKSAYKQADGKKIDGRRVLVDVERG 221
E E YGPIKR+ ++ ++ +GKP+GYAFIEY H+RDM SAYK ADGKKIDGRRVLVDVERG
Sbjct: 125 EFEVYGPIKRIHMVYNKRSGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERG 184
Query: 222 RTVPNWRPRRLGGGLGTSRVGGEDNNQRHSGREQQQSGAPSRSEEPRAREDRHGERDREK 281
RTV WRPRRLGGGLG +R GG D N RHSGR+ + R R+ R R+R+K
Sbjct: 185 RTVKGWRPRRLGGGLGGTRRGGADVNIRHSGRDDTSRYDERDRDRERERDRRERSRERDK 244
Query: 282 SYEKGRDREREKSHERSKDRDAREDKPHRDRDRTRDRDRDRDRERERDRDRTRDRDRGRD 341
E+ R R RE+ RS+ R+ E K R+R R +D+D+D+D+++E+D+D+ RDR R R
Sbjct: 245 ERERRRSRSRER-RRRSRSREKEERKRSRERSRDKDKDKDKDKDKEKDKDKDRDRKR-RS 304
Query: 342 RGRDRERHRDRDRERDRDHDGG----YADPDRGRSHDRESNYDRVESKYE-KDRHGDRDR 401
R R+R+R RDRDRE+ D G D + + + D +E K E ++++ DRDR
Sbjct: 305 RSRERKRERDRDREKKEDRVEGEVPESVDVPQDDAQTGDLGIDGIELKQEPEEKNRDRDR 364
Query: 402 DIDHAETEDGHGWYDQPEHGQRHPDTDHDPQYNDHFEHSRSRGQ-HDHPEDH-RDEDRYD 457
+ D + D D+ + + H D + D + R R + D DH R+ DR D
Sbjct: 365 ERDREKDRDKDRDRDR-DRRRSHRDRERDKDRERDRDRRRDRDRDRDRDRDHKRERDRGD 424
BLAST of Sed0017755.1 vs. ExPASy Swiss-Prot
Match:
Q1RMR2 (U1 small nuclear ribonucleoprotein 70 kDa OS=Bos taurus OX=9913 GN=SNRNP70 PE=2 SV=1)
HSP 1 Score: 229.6 bits (584), Expect = 7.9e-59
Identity = 188/434 (43.32%), Postives = 238/434 (54.84%), Query Frame = 0
Query: 42 LTNNLLKLFEPRPPLEFKP-----PPEKRKCPPLLGMAQFVSHFAEPGDPEYAPPIQKGE 101
L NLL LF PR P+ + P P EK P G+A ++ F +P D APP + E
Sbjct: 5 LPPNLLALFAPRDPIPYLPPLEKLPHEKHHNQPYCGIAPYIREFEDPRD---APPPTRAE 64
Query: 102 TPAQRKARIHLLKIEKGAEKVAEELPKYLERDDPNVTGDPYKTLFVARLNYETTESRIKR 161
T +R R KIE+ ++V EL + +DPN GD +KTLFVAR+NY+TTES+++R
Sbjct: 65 TREERMERKRREKIERRQQEVETELKMWDPHNDPNAQGDAFKTLFVARVNYDTTESKLRR 124
Query: 162 ELESYGPIKRVRLITDEVTGKPKGYAFIEYMHKRDMKSAYKQADGKKIDGRRVLVDVERG 221
E E YGPIKR+ ++ + +GKP+GYAFIEY H+RDM SAYK ADGKKIDGRRVLVDVERG
Sbjct: 125 EFEVYGPIKRIHMVYSKRSGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERG 184
Query: 222 RTVPNWRPRRLGGGLGTSRVGGEDNNQRHSGRE--QQQSGAPSRSEEPRAREDRHGERD- 281
RTV WRPRRLGGGLG +R GG D N RHSGR+ + P S P DR ER+
Sbjct: 185 RTVKGWRPRRLGGGLGGTRRGGADVNIRHSGRDDTSRYDERPGPSPLPHRDRDRDRERER 244
Query: 282 REKSYEKGRDREREKSHERSKDRDAR-EDKPHRDRDRTRDRDRDRDRERERDRDRTRDR- 341
RE+S E+ ++RER +S R + R +R DK R R R R +D+DRDR+R R R R R
Sbjct: 245 RERSRERDKERERRRSRSRDRRRRSRSRDKEERRRSRERSKDKDRDRKRRSSRSRERARR 304
Query: 342 ----------------------------------------------DRGRDRGRD----- 401
++GRDR RD
Sbjct: 305 ERERKEELRGGGGGGGDMAEPSEAGDAPPDDGPPGELGPDGPDGPEEKGRDRDRDRRRSH 364
Query: 402 ---RERHRDRDRERDRDHDGGYADPDRGRSHDRESNYDRVESKYEKDRHGDRDRDIDHAE 412
RER RDRDR+RDR+H G DRGR R ++ E + RD + E
Sbjct: 365 RSERERRRDRDRDRDREHKRGERGGDRGRDEARGGGGGGQDNGLEGLGNDGRDM---YME 424
BLAST of Sed0017755.1 vs. ExPASy Swiss-Prot
Match:
P08621 (U1 small nuclear ribonucleoprotein 70 kDa OS=Homo sapiens OX=9606 GN=SNRNP70 PE=1 SV=2)
HSP 1 Score: 229.6 bits (584), Expect = 7.9e-59
Identity = 171/384 (44.53%), Postives = 224/384 (58.33%), Query Frame = 0
Query: 42 LTNNLLKLFEPRPPLEFKP-----PPEKRKCPPLLGMAQFVSHFAEPGDPEYAPPIQKGE 101
L NLL LF PR P+ + P P EK P G+A ++ F +P D APP + E
Sbjct: 5 LPPNLLALFAPRDPIPYLPPLEKLPHEKHHNQPYCGIAPYIREFEDPRD---APPPTRAE 64
Query: 102 TPAQRKARIHLLKIEKGAEKVAEELPKYLERDDPNVTGDPYKTLFVARLNYETTESRIKR 161
T +R R KIE+ ++V EL + +DPN GD +KTLFVAR+NY+TTES+++R
Sbjct: 65 TREERMERKRREKIERRQQEVETELKMWDPHNDPNAQGDAFKTLFVARVNYDTTESKLRR 124
Query: 162 ELESYGPIKRVRLITDEVTGKPKGYAFIEYMHKRDMKSAYKQADGKKIDGRRVLVDVERG 221
E E YGPIKR+ ++ + +GKP+GYAFIEY H+RDM SAYK ADGKKIDGRRVLVDVERG
Sbjct: 125 EFEVYGPIKRIHMVYSKRSGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERG 184
Query: 222 RTVPNWRPRRLGGGLGTSRVGGEDNNQRHSGREQQQSGAPSRSEEPRAREDRHGERDREK 281
RTV WRPRRLGGGLG +R GG D N RHSGR+ P DR +R+RE+
Sbjct: 185 RTVKGWRPRRLGGGLGGTRRGGADVNIRHSGRDDTSRYDERPGPSPLPHRDRDRDRERER 244
Query: 282 SYEKGRDREREKSHERSKDRDAREDKPHRDR-DRTRDRDRDRDRERERDRDRTRDRDRGR 341
E+ R+R++E+ RS+ RD R RD+ +R R R+R +D++R+R R +R R+R R
Sbjct: 245 R-ERSRERDKERERRRSRSRDRRRRSRSRDKEERRRSRERSKDKDRDRKRRSSRSRERAR 304
Query: 342 DRGRDRERHRDRDRERDRDHDGGYADPD-----------------RGRSHDRESNYD-RV 401
+E R + + G A PD +GR DRE R
Sbjct: 305 RERERKEELRGGGGDMAEPSEAGDAPPDDGPPGELGPDGPDGPEEKGRDRDRERRRSHRS 364
BLAST of Sed0017755.1 vs. ExPASy Swiss-Prot
Match:
Q62376 (U1 small nuclear ribonucleoprotein 70 kDa OS=Mus musculus OX=10090 GN=Snrnp70 PE=1 SV=2)
HSP 1 Score: 223.8 bits (569), Expect = 4.3e-57
Identity = 187/443 (42.21%), Postives = 238/443 (53.72%), Query Frame = 0
Query: 42 LTNNLLKLFEPRPPLEFKP-----PPEKRKCPPLLGMAQFVSHFAEPGDPEYAPPIQKGE 101
L NLL LF PR P+ + P P EK P G+A ++ F +P D APP + E
Sbjct: 5 LPPNLLALFAPRDPIPYLPPLEKLPHEKHHNQPYCGIAPYIREFEDPRD---APPPTRAE 64
Query: 102 TPAQRKARIHLLKIEKGAEKVAEELPKYLERDDPNVTGDPYKTLFVARLNYETTESRIKR 161
T +R R KIE+ ++V EL + +DPN GD +KTLFVAR+NY+TTES+++R
Sbjct: 65 TREERMERKRREKIERRQQEVETELKMWDPHNDPNAQGDAFKTLFVARVNYDTTESKLRR 124
Query: 162 ELESYGPIKRVRLITDEVTGKPKGYAFIEYMHKRDMKSAYKQADGKKIDGRRVLVDVERG 221
E E YGPIKR+ ++ + +GKP+GYAFIEY H+RDM SAYK ADGKKIDGRRVLVDVERG
Sbjct: 125 EFEVYGPIKRIHMVYSKRSGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERG 184
Query: 222 RTVPNWRPRRLGGGLGTSRVGGEDNNQRHSGRE--QQQSGAPSRSEEPRAREDRHGERD- 281
RTV WRPRRLGGGLG +R GG D N RHSGR+ + P S P DR ER+
Sbjct: 185 RTVKGWRPRRLGGGLGGTRRGGADVNIRHSGRDDTSRYDERPGPSPLPHRDRDRDRERER 244
Query: 282 REKSYEKGRDREREKSHERSKDRDAR-EDKPHRDRDRTRDRDRDRDRERERDRDRTRDR- 341
RE+S E+ ++RER +S R + R +R DK R R R R +D+DRDR+R R R R R
Sbjct: 245 RERSRERDKERERRRSRSRDRRRRSRSRDKDERRRSRERSKDKDRDRKRRSSRSRERARR 304
Query: 342 -------------------------------------------------------DRGRD 401
++GRD
Sbjct: 305 ERERKEELRGGGGGGGGGSGGGGGGDMAEPSEAGDGAPDDGPPGELGPEGPDGPEEKGRD 364
Query: 402 RGR--------DRERHRDRDRERDRDHDGGYADPDRGRSHDRESNYDRVESKYEKDRHGD 412
R R +RER RDRDR+RDR+H G +RGR R ++ E G
Sbjct: 365 RDRERRRSHRSERERRRDRDRDRDREHKRGERGSERGRDEARGGGGSGQDNGLE--GLGS 424
BLAST of Sed0017755.1 vs. ExPASy TrEMBL
Match:
A0A6J1BSC4 (U1 small nuclear ribonucleoprotein 70 kDa OS=Momordica charantia OX=3673 GN=LOC111005312 PE=4 SV=1)
HSP 1 Score: 801.2 bits (2068), Expect = 2.4e-228
Identity = 440/511 (86.11%), Postives = 469/511 (91.78%), Query Frame = 0
Query: 1 MGDYNDAFMRNQNAAVQARTKAQNRASVLQLKLIGQSHPTGLTNNLLKLFEPRPPLEFKP 60
MGDYNDAFMRNQNAAVQARTKAQNRA+VLQLKLIGQSHPTGLT NLLKLFEPRPPLE+KP
Sbjct: 1 MGDYNDAFMRNQNAAVQARTKAQNRANVLQLKLIGQSHPTGLTANLLKLFEPRPPLEYKP 60
Query: 61 PPEKRKCPPLLGMAQFVSHFAEPGDPEYAPPIQKGETPAQRKARIHLLKIEKGAEKVAEE 120
PPEKRKCPPL GMAQFVS+FAEP DPEYAPP+QKGETPAQR+ARIHLL+IEKGAEK AEE
Sbjct: 61 PPEKRKCPPLTGMAQFVSNFAEPDDPEYAPPVQKGETPAQRRARIHLLRIEKGAEKAAEE 120
Query: 121 LPKYLERDDPNVTGDPYKTLFVARLNYETTESRIKRELESYGPIKRVRLITDEVTGKPKG 180
LPKYLERDDPNVTGDPYKTLFVARLNYETTESRIKRE ESYGPIKRVRLITD+VTGKPKG
Sbjct: 121 LPKYLERDDPNVTGDPYKTLFVARLNYETTESRIKREFESYGPIKRVRLITDKVTGKPKG 180
Query: 181 YAFIEYMHKRDMKSAYKQADGKKIDGRRVLVDVERGRTVPNWRPRRLGGGLGTSRVGGED 240
YAFIEYMHKRDMK+AYKQADG+KIDGRRVLVDVERGRTVPNWRPRRLGGGLGT+RVGGE+
Sbjct: 181 YAFIEYMHKRDMKAAYKQADGRKIDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEE 240
Query: 241 NNQRHSGREQQQSGAPSRSEEPRAREDRHGERDREKSYEKGRDRE------REKSHERSK 300
NNQRHSGREQQQSGAPSRSEEPR REDRHGERDREKS+EKGRDRE RE+SHERSK
Sbjct: 241 NNQRHSGREQQQSGAPSRSEEPRGREDRHGERDREKSHEKGRDREREREKSRERSHERSK 300
Query: 301 DRDAREDKPHRDRDRTRDRDRDRDRERER----DRDRTRDRDRGRDRG--------RDRE 360
DRD RED+ HRDRDRTRDRDRDR+RERER DRD+TRDRDRGRDRG RDR+
Sbjct: 301 DRDLREDRHHRDRDRTRDRDRDRERERERDRGYDRDKTRDRDRGRDRGRDYERDRDRDRD 360
Query: 361 RHRDRDRERDRDHDGGYADPDRGRSHDRESNYDRVESKYEKDRHGDRDRDIDHAETEDGH 420
RHRDRDRERDR+H+ GY +PDRGRSHDRES+YDRVESKYEKDRHGDRDR+ID ETEDG
Sbjct: 361 RHRDRDRERDRNHEDGYPEPDRGRSHDRESDYDRVESKYEKDRHGDRDREIDRTETEDGR 420
Query: 421 GWYDQPEHGQRHPDTDHDPQYNDHFEHSRSRGQH-DHPEDHRDEDRYDQNDRMEEDDYHY 480
GWYDQ EHG RHPD DHDPQY DHFEH+R RGQ+ D+PE H D+DRYDQ DRM EDDYHY
Sbjct: 421 GWYDQSEHGHRHPDPDHDPQYYDHFEHNRGRGQYDDNPEGHHDQDRYDQYDRM-EDDYHY 480
Query: 481 ERGTSESRDRERSRDLNHEYRRSERSHSREH 493
ERGTSES D+ERSRD+NHEYRRSERSHSRE+
Sbjct: 481 ERGTSESHDKERSRDMNHEYRRSERSHSREY 510
BLAST of Sed0017755.1 vs. ExPASy TrEMBL
Match:
A0A6J1KS72 (U1 small nuclear ribonucleoprotein 70 kDa-like OS=Cucurbita maxima OX=3661 GN=LOC111496769 PE=4 SV=1)
HSP 1 Score: 798.5 bits (2061), Expect = 1.6e-227
Identity = 439/512 (85.74%), Postives = 470/512 (91.80%), Query Frame = 0
Query: 1 MGDYNDAFMRNQNAAVQARTKAQNRASVLQLKLIGQSHPTGLTNNLLKLFEPRPPLEFKP 60
MGDYNDAFMRNQNAAVQARTKAQNRA+VLQLKLIGQSHPTGLT NLLKLFEPRPPLE+KP
Sbjct: 1 MGDYNDAFMRNQNAAVQARTKAQNRANVLQLKLIGQSHPTGLTANLLKLFEPRPPLEYKP 60
Query: 61 PPEKRKCPPLLGMAQFVSHFAEPGDPEYAPPIQKGETPAQRKARIHLLKIEKGAEKVAEE 120
PPEKRKCPPL GMAQFVSHFAEP DPEYAPP+Q+GETP+QR+ARIHLL+IEKGA+K AEE
Sbjct: 61 PPEKRKCPPLTGMAQFVSHFAEPDDPEYAPPVQEGETPSQRRARIHLLRIEKGAQKAAEE 120
Query: 121 LPKYLERDDPNVTGDPYKTLFVARLNYETTESRIKRELESYGPIKRVRLITDEVTGKPKG 180
LPKYLERDDPNVTGDPYKTLFVARLNYET+ESRIKRE ESYGPIKRVRLITD+VTGKPKG
Sbjct: 121 LPKYLERDDPNVTGDPYKTLFVARLNYETSESRIKREFESYGPIKRVRLITDKVTGKPKG 180
Query: 181 YAFIEYMHKRDMKSAYKQADGKKIDGRRVLVDVERGRTVPNWRPRRLGGGLGTSRVGGED 240
YAFIEYMHKRDMK+AYKQADG+KIDGRRVLVDVERGRTVPNWRPRRLGGGLGT+RVGGE+
Sbjct: 181 YAFIEYMHKRDMKAAYKQADGRKIDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEE 240
Query: 241 NNQRHSGREQQQSGAPSRSEEPRAREDRHGERDREKSYEKGRDRE------REKSHERSK 300
N+QRH+GREQQQSGAPSRSEEPRAREDRHGERDREKSYEKGRDRE RE+SH+RSK
Sbjct: 241 NSQRHAGREQQQSGAPSRSEEPRAREDRHGERDREKSYEKGRDREREREKSRERSHDRSK 300
Query: 301 DRDAREDKPHRDRDRTRDRDRDRDRERER------DRDRTRDRDRGRDRG--------RD 360
D D RED+ HRDRDRTRDRDRDR++ERER DRDRTRDRDRGRDRG RD
Sbjct: 301 DHDLREDRHHRDRDRTRDRDRDREKERERERERGHDRDRTRDRDRGRDRGRDYERDRDRD 360
Query: 361 RERHRDRDRERDRDHDGGYADPDRGRSHDRESNYDRVESKYEKDRHGDRDRDIDHAETED 420
R+RHRDRDRERDRDH GGYADPDRGRSHDRES+YDRV+SKYEKDRHGDRD+DID ETED
Sbjct: 361 RDRHRDRDRERDRDHGGGYADPDRGRSHDRESDYDRVDSKYEKDRHGDRDKDIDPGETED 420
Query: 421 GHGWYDQPEHGQRH-PDTDHDPQYNDHFEHSRSRGQHDHPEDHRDEDRYDQNDRMEEDDY 480
GHGWYDQP HG RH PDTDHDPQY DHFEH+RSR Q+DHPE H +DRYDQ DRM EDDY
Sbjct: 421 GHGWYDQPVHGHRHPPDTDHDPQYYDHFEHNRSREQYDHPE-HHGQDRYDQYDRM-EDDY 480
Query: 481 HYERGTSESRDRERSRDLNHEYRRSERSHSRE 492
YERGTSE+RDRERSRDLNHEYRR++RSHSRE
Sbjct: 481 RYERGTSETRDRERSRDLNHEYRRADRSHSRE 510
BLAST of Sed0017755.1 vs. ExPASy TrEMBL
Match:
A0A6J1HIB1 (U1 small nuclear ribonucleoprotein 70 kDa-like OS=Cucurbita moschata OX=3662 GN=LOC111463239 PE=4 SV=1)
HSP 1 Score: 796.6 bits (2056), Expect = 6.0e-227
Identity = 437/512 (85.35%), Postives = 470/512 (91.80%), Query Frame = 0
Query: 1 MGDYNDAFMRNQNAAVQARTKAQNRASVLQLKLIGQSHPTGLTNNLLKLFEPRPPLEFKP 60
MGDYNDAFMRNQNAAVQARTKAQNRA+VLQLKLIGQSHPTGLT NLLKLFEPRPPLE+KP
Sbjct: 1 MGDYNDAFMRNQNAAVQARTKAQNRANVLQLKLIGQSHPTGLTANLLKLFEPRPPLEYKP 60
Query: 61 PPEKRKCPPLLGMAQFVSHFAEPGDPEYAPPIQKGETPAQRKARIHLLKIEKGAEKVAEE 120
PPEKRKCPPL GMAQFVSHFAEP DPEYAPP+Q+GETP+QR+ARIHLL+IEKGA+K EE
Sbjct: 61 PPEKRKCPPLTGMAQFVSHFAEPDDPEYAPPVQEGETPSQRRARIHLLRIEKGAQKAVEE 120
Query: 121 LPKYLERDDPNVTGDPYKTLFVARLNYETTESRIKRELESYGPIKRVRLITDEVTGKPKG 180
LPKYLERDDPNVTGDPYKTLFVARLNYET+ESRIKRE ESYGPIKRVRLITD+VTGKPKG
Sbjct: 121 LPKYLERDDPNVTGDPYKTLFVARLNYETSESRIKREFESYGPIKRVRLITDKVTGKPKG 180
Query: 181 YAFIEYMHKRDMKSAYKQADGKKIDGRRVLVDVERGRTVPNWRPRRLGGGLGTSRVGGED 240
YAFIEYMHKRDMK+AYKQADG+KIDGRRVLVDVERGRTVPNWRPRRLGGGLGT+RVGGE+
Sbjct: 181 YAFIEYMHKRDMKAAYKQADGRKIDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEE 240
Query: 241 NNQRHSGREQQQSGAPSRSEEPRAREDRHGERDREKSYEKGRDRE------REKSHERSK 300
N+QRH+GREQQQSGAPSRSEEPRAREDRHGERDREKSYEKGRDRE RE+SH+RSK
Sbjct: 241 NSQRHAGREQQQSGAPSRSEEPRAREDRHGERDREKSYEKGRDREREREKSRERSHDRSK 300
Query: 301 DRDAREDKPHRDRDRTRDRDRDRDRERER------DRDRTRDRDRGRDRG--------RD 360
DRD RED+ HRDRDRT DRDRDR++ERER DRDRTRDRDRGRDRG RD
Sbjct: 301 DRDLREDRHHRDRDRTIDRDRDREKERERERDRGHDRDRTRDRDRGRDRGRDYERDRDRD 360
Query: 361 RERHRDRDRERDRDHDGGYADPDRGRSHDRESNYDRVESKYEKDRHGDRDRDIDHAETED 420
R+RHRDRDRERDRDH+GG+ADPDRGRSHDRES+YDR++SKYEKDRHGDRD+DID ETED
Sbjct: 361 RDRHRDRDRERDRDHEGGFADPDRGRSHDRESDYDRIDSKYEKDRHGDRDKDIDPGETED 420
Query: 421 GHGWYDQPEHGQRH-PDTDHDPQYNDHFEHSRSRGQHDHPEDHRDEDRYDQNDRMEEDDY 480
GHGWYDQP HG RH PDTDHDPQY DHFEH+RSR Q+DHPE H +DRYDQ DRM EDDY
Sbjct: 421 GHGWYDQPAHGHRHPPDTDHDPQYYDHFEHNRSREQYDHPE-HHGQDRYDQYDRM-EDDY 480
Query: 481 HYERGTSESRDRERSRDLNHEYRRSERSHSRE 492
YERGTSE+RDRERSRDLNHEYRR+ERSHSRE
Sbjct: 481 RYERGTSETRDRERSRDLNHEYRRTERSHSRE 510
BLAST of Sed0017755.1 vs. ExPASy TrEMBL
Match:
A0A0A0KGZ1 (RRM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G502610 PE=4 SV=1)
HSP 1 Score: 789.6 bits (2038), Expect = 7.3e-225
Identity = 433/508 (85.24%), Postives = 461/508 (90.75%), Query Frame = 0
Query: 1 MGDYNDAFMRNQNAAVQARTKAQNRASVLQLKLIGQSHPTGLTNNLLKLFEPRPPLEFKP 60
MGDYNDAFMRNQNAAVQARTKAQNRA+VLQLKLIGQSHPTGLT NLLKLFEPRPPLEFKP
Sbjct: 1 MGDYNDAFMRNQNAAVQARTKAQNRANVLQLKLIGQSHPTGLTANLLKLFEPRPPLEFKP 60
Query: 61 PPEKRKCPPLLGMAQFVSHFAEPGDPEYAPPIQKGETPAQRKARIHLLKIEKGAEKVAEE 120
PPEKRKCPPL GMAQFVS+FAEP DPEYAPP+QKGETP +R+ARIHLL+IEKGAEK AEE
Sbjct: 61 PPEKRKCPPLTGMAQFVSNFAEPDDPEYAPPVQKGETPTERRARIHLLRIEKGAEKAAEE 120
Query: 121 LPKYLERDDPNVTGDPYKTLFVARLNYETTESRIKRELESYGPIKRVRLITDEVTGKPKG 180
LPKYLERDDPNVTGDPYKTLFVARLNYETTESRIKRE ESYGPIKRVRLITD+VTGKPKG
Sbjct: 121 LPKYLERDDPNVTGDPYKTLFVARLNYETTESRIKREFESYGPIKRVRLITDKVTGKPKG 180
Query: 181 YAFIEYMHKRDMKSAYKQADGKKIDGRRVLVDVERGRTVPNWRPRRLGGGLGTSRVGGED 240
YAFIEYMHKRDMK+AYKQADG+KIDGRRVLVDVERGRTVPNWRPRRLGGGLGT+RVGGE+
Sbjct: 181 YAFIEYMHKRDMKAAYKQADGRKIDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEE 240
Query: 241 NNQRHSGREQQQSGAPSRSEEPRAREDRHGERDREKSYEKGRDRE------REKSHERSK 300
N+QRHSGREQQQSGAPSRSEEPR REDRHGERDREKSY+KGRDRE RE SHERSK
Sbjct: 241 NSQRHSGREQQQSGAPSRSEEPRVREDRHGERDREKSYDKGRDRERDREKSREHSHERSK 300
Query: 301 DRDAREDKPHRDRDRTRDRDRDRDRERERDRDRTRDRDRGRDRG----------RDRERH 360
+RD RED+ HRDRDRTRDRDRDRDR+RERDRDR DRDR RDRG RDR+RH
Sbjct: 301 ERDVREDRHHRDRDRTRDRDRDRDRDRERDRDRGYDRDRTRDRGRDRGRDYERDRDRDRH 360
Query: 361 RDRDRERDRDHDGGYADPDRGRSHDRESNYDRVESKYEKDRHGDRDRDIDHAETEDGHGW 420
RDRDRER+RDH+GGY DPDRGRSHDR+ +YDRVESKYEKDRHGDRDRD+D AETEDG GW
Sbjct: 361 RDRDRERERDHEGGYPDPDRGRSHDRD-DYDRVESKYEKDRHGDRDRDVDRAETEDGRGW 420
Query: 421 YDQPEHGQRHPDTDHDPQYNDHFEHSRSRGQHDHPEDHRDEDRYDQNDRMEEDDYHYERG 480
YDQPEHG H D DHDPQY DHFEH+R RGQ+D PE HRD+DRYDQ D +DDYHYERG
Sbjct: 421 YDQPEHG--HRDADHDPQYYDHFEHNRGRGQYDQPEGHRDQDRYDQYDDRMDDDYHYERG 480
Query: 481 TSESRDRERSRDLNHEYRRSERSHSREH 493
SES DRERSRDLNHEY+RSERSHSRE+
Sbjct: 481 NSESHDRERSRDLNHEYKRSERSHSREY 505
BLAST of Sed0017755.1 vs. ExPASy TrEMBL
Match:
A0A1S3B1S2 (U1 small nuclear ribonucleoprotein 70 kDa OS=Cucumis melo OX=3656 GN=LOC103485041 PE=4 SV=1)
HSP 1 Score: 789.6 bits (2038), Expect = 7.3e-225
Identity = 437/508 (86.02%), Postives = 465/508 (91.54%), Query Frame = 0
Query: 1 MGDYNDAFMRNQNAAVQARTKAQNRASVLQLKLIGQSHPTGLTNNLLKLFEPRPPLEFKP 60
MGDYNDAFMRNQNAAVQARTKAQNRA+VLQLKLIGQSHPTGLT NLLKLFEPRPPLEFKP
Sbjct: 1 MGDYNDAFMRNQNAAVQARTKAQNRANVLQLKLIGQSHPTGLTANLLKLFEPRPPLEFKP 60
Query: 61 PPEKRKCPPLLGMAQFVSHFAEPGDPEYAPPIQKGETPAQRKARIHLLKIEKGAEKVAEE 120
PPEKRKCPPL GMAQFVS+FAEP DPEYAPP+QKGETPA+R+ARIHLL+IEKGAEK AEE
Sbjct: 61 PPEKRKCPPLTGMAQFVSNFAEPDDPEYAPPVQKGETPAERRARIHLLRIEKGAEKAAEE 120
Query: 121 LPKYLERDDPNVTGDPYKTLFVARLNYETTESRIKRELESYGPIKRVRLITDEVTGKPKG 180
LPKYLERDDPNVTGDPYKTLFVARLNYETTESRIKRE ESYGPIKRVRLITD+VTGKPKG
Sbjct: 121 LPKYLERDDPNVTGDPYKTLFVARLNYETTESRIKREFESYGPIKRVRLITDKVTGKPKG 180
Query: 181 YAFIEYMHKRDMKSAYKQADGKKIDGRRVLVDVERGRTVPNWRPRRLGGGLGTSRVGGED 240
YAFIEYMHKRDMK+AYKQADG+KIDGRRVLVDVERGRTVPNWRPRRLGGGLGT+RVGGE+
Sbjct: 181 YAFIEYMHKRDMKAAYKQADGRKIDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEE 240
Query: 241 NNQRHSGREQQQSGAPSRSEEPRAREDRHGERDREKSYEKGRDREREK------SHERSK 300
N+QRHSGREQQQSGAPSRSEEPRAREDRHGERDREKSY+KGRDRERE+ SHERSK
Sbjct: 241 NSQRHSGREQQQSGAPSRSEEPRAREDRHGERDREKSYDKGRDREREREKSREHSHERSK 300
Query: 301 DRDAREDKPHRDRDRTRDRDRDRDRERERDR--DRTRDRDRGRDRG------RDRERHRD 360
+RD RED+ HRDRDRTRDRDRDRDRER+RDR DR R RDRGRDRG RDR+RHRD
Sbjct: 301 ERDVREDRHHRDRDRTRDRDRDRDRERDRDRGYDRDRTRDRGRDRGRDYERDRDRDRHRD 360
Query: 361 RDRERDRDHDGGYADPDRGRSHDRESNYDRVESKYEKDRHG--DRDRDIDHAETEDGHGW 420
RDRERDRDH+GGY DPDRGRSHDR+ +YDRVESKYEKDRHG DRDRD+D AETEDG GW
Sbjct: 361 RDRERDRDHEGGYPDPDRGRSHDRD-DYDRVESKYEKDRHGDRDRDRDMDRAETEDGRGW 420
Query: 421 YDQPEHGQRHPDTDHDPQYNDHFEHSRSRGQHDHPEDHRDEDRYDQNDRMEEDDYHYERG 480
YDQPEHG H D DHDPQY DHFEH+R RGQ+D PE HRD+DRYDQ D +DDYHYERG
Sbjct: 421 YDQPEHG--HRDADHDPQYYDHFEHNRGRGQYDQPEGHRDQDRYDQYDDRMDDDYHYERG 480
Query: 481 TSESRDRERSRDLNHEYRRSERSHSREH 493
SES DRERSRDLNHEY+RSERSHSRE+
Sbjct: 481 NSESHDRERSRDLNHEYKRSERSHSREY 505
BLAST of Sed0017755.1 vs. TAIR 10
Match:
AT3G50670.1 (U1 small nuclear ribonucleoprotein-70K )
HSP 1 Score: 436.4 bits (1121), Expect = 3.0e-122
Identity = 286/500 (57.20%), Postives = 338/500 (67.60%), Query Frame = 0
Query: 1 MGDYNDAFMRNQNAAVQARTKAQNRASVLQLKLIGQSHPTGLTNNLLKLFEPRPPLEFKP 60
MGD D F+RN NAAVQAR K QNRA+VLQLKL+GQSHPTGLTNNLLKLFEPRPPLE+KP
Sbjct: 1 MGDSGDPFLRNPNAAVQARAKVQNRANVLQLKLMGQSHPTGLTNNLLKLFEPRPPLEYKP 60
Query: 61 PPEKRKCPPLLGMAQFVSHFAEPGDPEYAPPIQKGETPAQRKARIHLLKIEKGAEKVAEE 120
PPEKRKCPP GMAQFVS+FAEPGDPEYAPP + E P+Q++ RIH L++EKG EK AE+
Sbjct: 61 PPEKRKCPPYTGMAQFVSNFAEPGDPEYAPPKPEVELPSQKRERIHKLRLEKGVEKAAED 120
Query: 121 LPKYLERDDPNVTGDPYKTLFVARLNYETTESRIKRELESYGPIKRVRLITDEVTGKPKG 180
L KY +DPN TGDPYKTLFV+RLNYE++ES+IKRE ESYGPIKRV L+TD++T KPKG
Sbjct: 121 LKKYDPNNDPNATGDPYKTLFVSRLNYESSESKIKREFESYGPIKRVHLVTDQLTNKPKG 180
Query: 181 YAFIEYMHKRDMKSAYKQADGKKIDGRRVLVDVERGRTVPNWRPRRLGGGLGTSRVGGED 240
YAFIEYMH RDMK+AYKQADG+KIDGRRVLVDVERGRTVPNWRPRRLGGGLGTSRVGG +
Sbjct: 181 YAFIEYMHTRDMKAAYKQADGQKIDGRRVLVDVERGRTVPNWRPRRLGGGLGTSRVGGGE 240
Query: 241 NNQRHSGREQQQSGAPSRSEEP-RAREDRHGERDREKSYEKGRDREREKSHERSKDRDAR 300
EQQ G S+SEEP R RE+R R++ K E+ R+ E+ ERS+DR R
Sbjct: 241 ----EIVGEQQPQGRTSQSEEPSRPREEREKSREKGKERERSRELSHEQPRERSRDR-PR 300
Query: 301 EDKPHRDRDR-TRDRDRDRDRERERDRDR----TRDRDRGRDRGRDRERHRDRDRERDRD 360
EDK HRDRD+ RDRDRD R+R+R RDR RDRDRGRDR R+ RDR R+++RD
Sbjct: 301 EDKHHRDRDQGGRDRDRDSRRDRDRTRDRGDRDRRDRDRGRDR-TSRDHDRDRSRKKERD 360
Query: 361 HDGG-YADPDRGRSHDRESNYDRVESKYEKDRHGDRDRDIDHAETEDGHGWYDQPEHGQR 420
++GG Y GRS +R++ Y E E+ G+Y+
Sbjct: 361 YEGGEYEHEGGGRSRERDAEY--------------------RGEPEETRGYYE------- 420
Query: 421 HPDTDHDPQYNDHFEHSRSRGQHDHPEDHRDEDRYDQN-DRMEEDDYHYERGTSESRDRE 480
+D D DRY D+MEEDD+ YER
Sbjct: 421 --------------------------DDQGDTDRYSHRYDKMEEDDFRYER--------- 425
Query: 481 RSRDLNHEYRRSERSHSREH 493
EY+RS+RS SRE+
Sbjct: 481 -------EYKRSKRSESREY 425
BLAST of Sed0017755.1 vs. TAIR 10
Match:
AT3G50670.2 (U1 small nuclear ribonucleoprotein-70K )
HSP 1 Score: 266.5 bits (680), Expect = 4.1e-71
Identity = 128/167 (76.65%), Postives = 145/167 (86.83%), Query Frame = 0
Query: 1 MGDYNDAFMRNQNAAVQARTKAQNRASVLQLKLIGQSHPTGLTNNLLKLFEPRPPLEFKP 60
MGD D F+RN NAAVQAR K QNRA+VLQLKL+GQSHPTGLTNNLLKLFEPRPPLE+KP
Sbjct: 1 MGDSGDPFLRNPNAAVQARAKVQNRANVLQLKLMGQSHPTGLTNNLLKLFEPRPPLEYKP 60
Query: 61 PPEKRKCPPLLGMAQFVSHFAEPGDPEYAPPIQKGETPAQRKARIHLLKIEKGAEKVAEE 120
PPEKRKCPP GMAQFVS+FAEPGDPEYAPP + E P+Q++ RIH L++EKG EK AE+
Sbjct: 61 PPEKRKCPPYTGMAQFVSNFAEPGDPEYAPPKPEVELPSQKRERIHKLRLEKGVEKAAED 120
Query: 121 LPKYLERDDPNVTGDPYKTLFVARLNYETTESRIKRELESYGPIKRV 168
L KY +DPN TGDPYKTLFV+RLNYE++ES+IKRE ESYGPIKRV
Sbjct: 121 LKKYDPNNDPNATGDPYKTLFVSRLNYESSESKIKREFESYGPIKRV 167
BLAST of Sed0017755.1 vs. TAIR 10
Match:
AT2G43370.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )
HSP 1 Score: 70.5 bits (171), Expect = 4.3e-12
Identity = 91/284 (32.04%), Postives = 127/284 (44.72%), Query Frame = 0
Query: 129 DPNVTGDPYKTLFVARLNYETTESRIKRELESYGPIKRVRLITDEVTGKPKGYAFIEYMH 188
D GDPY TLFV RL++ TTE ++ + YG IK +RL+ VTG +GY F+EY
Sbjct: 55 DSKAVGDPYCTLFVGRLSHHTTEDTLREVMSKYGRIKNLRLVRHIVTGASRGYGFVEYET 114
Query: 189 KRDMKSAYKQADGKKIDGRRVLVDVERGRTVPNWRPRRLGGGL------GTSRVGGEDNN 248
+++M AY+ A IDGR ++VD R + +P W PRRLGGGL G R GG D
Sbjct: 115 EKEMLRAYEDAHHSLIDGREIIVDYNRQQLMPGWIPRRLGGGLGGRKESGQLRFGGRDRP 174
Query: 249 QR-------------------HSGREQQQSGAPSRSEEPRAREDRHGERDREKSYEKGRD 308
R GR ++ PS + DR E REKS + +
Sbjct: 175 FRAPLRPIPHEDLKKLGIQLPPEGRYMSRTQIPSPPRRKGSVSDREEEYYREKSSVEREE 234
Query: 309 REREKSHERSKDRDAREDKPHRDRDRTRDRDRDRDRERER-DRDRTRDRDRGRDRGRDRE 368
+E+S RS HR T R R ++RE R+ +R + R RG + +
Sbjct: 235 EFKERSSLRSY-------HSHRSSAHTHSSHRRRSKDREECSREESRSDRKERARGME-D 294
Query: 369 RHRDRDRERDRDHDGGYADPDRGRSHDRESNYDRVESKYEKDRH 387
R+ D E ++ DR R + Y +D H
Sbjct: 295 RYGDNKGEVSGSKRSKRSEEDRSRKRHKHLPSHHHRRSYSQDHH 330
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_038881482.1 | 2.2e-228 | 86.61 | U1 small nuclear ribonucleoprotein 70 kDa [Benincasa hispida] | [more] |
XP_022132461.1 | 5.0e-228 | 86.11 | U1 small nuclear ribonucleoprotein 70 kDa [Momordica charantia] | [more] |
XP_023517571.1 | 1.1e-227 | 85.58 | U1 small nuclear ribonucleoprotein 70 kDa-like [Cucurbita pepo subsp. pepo] >XP_... | [more] |
XP_023003041.1 | 3.2e-227 | 85.74 | U1 small nuclear ribonucleoprotein 70 kDa-like [Cucurbita maxima] >XP_023003042.... | [more] |
XP_022962873.1 | 1.2e-226 | 85.35 | U1 small nuclear ribonucleoprotein 70 kDa-like [Cucurbita moschata] >XP_02296287... | [more] |
Match Name | E-value | Identity | Description | |
Q42404 | 4.2e-121 | 57.20 | U1 small nuclear ribonucleoprotein 70 kDa OS=Arabidopsis thaliana OX=3702 GN=RNU... | [more] |
Q66II8 | 8.4e-61 | 43.79 | U1 small nuclear ribonucleoprotein 70 kDa OS=Xenopus tropicalis OX=8364 GN=snrnp... | [more] |
Q1RMR2 | 7.9e-59 | 43.32 | U1 small nuclear ribonucleoprotein 70 kDa OS=Bos taurus OX=9913 GN=SNRNP70 PE=2 ... | [more] |
P08621 | 7.9e-59 | 44.53 | U1 small nuclear ribonucleoprotein 70 kDa OS=Homo sapiens OX=9606 GN=SNRNP70 PE=... | [more] |
Q62376 | 4.3e-57 | 42.21 | U1 small nuclear ribonucleoprotein 70 kDa OS=Mus musculus OX=10090 GN=Snrnp70 PE... | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1BSC4 | 2.4e-228 | 86.11 | U1 small nuclear ribonucleoprotein 70 kDa OS=Momordica charantia OX=3673 GN=LOC1... | [more] |
A0A6J1KS72 | 1.6e-227 | 85.74 | U1 small nuclear ribonucleoprotein 70 kDa-like OS=Cucurbita maxima OX=3661 GN=LO... | [more] |
A0A6J1HIB1 | 6.0e-227 | 85.35 | U1 small nuclear ribonucleoprotein 70 kDa-like OS=Cucurbita moschata OX=3662 GN=... | [more] |
A0A0A0KGZ1 | 7.3e-225 | 85.24 | RRM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G502610 PE=4 SV... | [more] |
A0A1S3B1S2 | 7.3e-225 | 86.02 | U1 small nuclear ribonucleoprotein 70 kDa OS=Cucumis melo OX=3656 GN=LOC10348504... | [more] |