Sed0011970.2 (mRNA) Chayote v1

Overview


Name	Sed0011970.2
Type	mRNA
Organism	Sechium edule (Chayote v1)
Description	Auxin-responsive protein
Location	LG05: 421862 .. 425288 (+)
Sequence length	1989
RNA-Seq Expression	Sed0011970.2
Synteny	Sed0011970.2

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CAAAATGCAGTGTCTTTATAATAATAATTATTATTATTATTATGATTTGAACCAAGAATAACAAACAGGCAGAAACCAAGGTGATATTAAAGCCATTGTAAGAGAGATCGAAGAGAAAGAGAGGCCGAAAACGATGTCGTTCGAGGAGACAGAGCTGAGGCTAGGGCTGCCTGGGAGAGAAATACTGACAAGGAAGAGAGGGTTTCATGAAACTGCTGCAATGGAAGGTTTGAAGCTTAATCTAACTTCTTCTACTAAAGAAGAAGCCTCTTATCATGGGTTGGATCCAAATCCCAAGCCTCCCCCACCCAAGTAAGTACTTTTTAATTGCCCTTCAAATAATTAACATTATCCTTTCTAGCATTTTTTTTTAGAATTTGGCTAAAAAATCAAAGGTTTCTTGAGGATAAAAACTGTAGTAAAACAAAATTTGGAAAGAAATGAGTACAAACTTTAACAAACATAAAACAAAATAAGTAGGTTATTTAGGGAAGAAAGTTAAACATGTAATTGGTTCAAGATGAATAAGAATATGAAACTATATTTTTTTAATATTCATGACTGTCTTGGTCAACTTGCGTACACCTAGACTAATGTCAATGTTCATACTACTTAGCCCTACATCATTTGGATGTGAAGGTAATTTGTAGAAAATTTTAATTCCTAAGTAGGTAACTTCTATAGATTGATCCTATTATTTCTGAACTCTCCAAAACCCTTTTAACCGCTAAGCCAAATTTTATGGTGGTTAAGAAGAGGTGTGGAACTAAATAATGTAATTGTAGGTATATTTTGGTAGGGCATATGAGAGAACTCAAAACCAATTGATATGGGAGTGTACTAGCACATCTATTTTAGGAATAATATTGTGAGGTATCTTCATATTTTCTAAATAAAGTCTTCTTAAAGATGATCGATTCTTCTAATATACGTTTAAGTTTAATGAACCATGATACCATATTGATTTTATAACAAAATTGATTGATAGTAATTCATCTACTTTATAAATATTTATAAAGTATATATAAATTCAAGTGTCTAATGTGAGATCCTTAACAGGATGGAGGTGGTGGGTTGGCCACCACTAAGGACAAACAGAAAAAACATAGTGATGCTCCAAAAGGGAAAAAACAGATCATCATCATCAGAGGAATTATTATTAGAGAATAATAATAGCAATAATAATAATGGAGGGTGGTTTGTGAAGGTTAGCGTTGATGGAGCACCTTATCTTCGCAAGGTGGACTTAAGCATCTTCAATTCCTACAAACAACTCTCTCTTGCACTCGCCACCCTATTTGCTCCCTTCACCATTATTCGTAATTTATTTCCCTCTTTCACTTTACCCCTTCATTTACTTTTAATCAAATGTTTCAAAGCTACTAATTAATACATCCATTTGTTGAGAATCTTCTGTTATAATTATCAAACTTATGACTCTTACATCAAACAAATTTCTTAACCTACGATATAGAGAATTTTGAATCTCCAAAGTATGCTCATTTATGACTCGTTTGATAACCATTTTGTTTTTTGTTTATGAAATTGAAATCTATTCTATTCAAATTTCCTACCATGTGCTCTATCTTTCCTACAATATATCCATCTTTCCTTAAGAAAGTAGGAGAATACCAACCAAATTTCAAAAACATAAACAAGTTTTTGGAAGCTACTTTTTTTTGTTTACAAATTTTGGTTTTGTTTATCAAAATATAGGTAAGATGTAGATATCTAAATAAGGAAAAAGGTATAACAAGGTAGTTGTCGTAGGCTTAAATTTCATAAACAAAAAAAGAAAAACAAAATGGTTATCAAACGGGGTCTTAAATGTTCCCAAATTCAAAATCTTCAAATGAGTACAGGTGAAAATCCTTTGTTTGTCGATTGCATTCGAAATTTGGGATCGGTAGATGTAGTGGGACCAACTATTAAACTAAATGGGTTCCTAAAGGGTAGGCGGCCCCAATTTTTCTTCATACAGCTAGACTAATTGAAAGTTCTAAGAATAAATTTAGGGACTTATTAAATCACAAGTATACTTCATGATCTTCTAAGGCAACTAAAATATTCCTTTGAAAGTCATGAGCTTTCATTGTGGGTTGATCAATTAAAATTGTTCTACAACATAAAATGTCAAACGATCGTTATGTCATTAAAGAAAAAAAAACACAAATTATAACTGATCTGGACATGTGTTGAAGTTTAGGAAAATCTAGAATATGAATATTTTTATGCATGAAATTTTAAGTTGTTATTGAAGTGTAGGAATTAAAATGATGGTTTTTGTTTTATTTTCCTTTTAATGTGTATATATCATAAGGTAACTGTGGATCCCAAGCTGCTGGGATGAAAGATGTTTTAGATGGTTTTGATTATGTTCACACCTATCAAGACAAGGATGGAGATTGGATGCTTGTTGGAGATGTTCCATGGCAGTAAGTCTTATTTTTTCTTTTTATATATCAAACTCTTTAATTATCTTATAATCATATATTTTAGGCTAGATAATTTTTTGATATAGCTTAGGTTAATTCAATTCTATTTTCAAACAGCATAAACTAACTGTGCTTCGATAATCATCCAGAATGTTTGTGGAATCTTGCAAGCGTCTACGCATCATGAAAGGAAAGGAAGCCATTGGACTTGGTAAGATTCATACCTTTTTTTTTTTCTTCATTTTAAATCCGATATCAAATGACAGTGATATGTTTATTAAAACTATATATATATATATATATAAATATATATAAAATCGAAAACGCTCTCCTATGCCTGGGGCACTATTGGTCTGACACCAGGATACTTAAAAGGATATTCTAATTTAAGTGCTTTCCAGCCGCCTCAAACCAGGGATCTCTTAAGAAAGCATGCTTTGAAATCTTTAGTCTCAATCGCTGGACTGCTCCTTGAGGACTGTCCCTAGACTATTAAACCAAGATCATTTAGAGGATATTTTAAATTAAGTGCTCTTTAACAACCTCGAACCAAGTATCTCTCAAAGAAGCATGCTTTGGAGTCGGAAACAACTCAACAATATTTGATATGAAAGATTTGATCCTTCAATTTTTTTTGTTGTCAAATACTACTTTAAAGTCAATTAAGCTCAACTCTACTTAACAACTTTAAAGCCCTTGTAATAACATATATATTGATTTTTTTTTCTTTTCATTTTGGTGTGGGTTTATCAGCACCAAGGACTATAGAGAAGTGCAAGCTGAACTGCAAGAGCTAACTTCATATTTGATGTTTCCAAGAAAATGCATGCATGGCCGTTATGCAAATGAATATAGTCTGGGTTTGGGACAGATTCGGTTGGTGTCTTTATAATTTCAAAAGATACGTAATGGGTTTGGAATGAATTAAGCAAAAATTATTAGGATGTATTTAATGTGAGATTATAATTTGTATCTAAGATATAATAATGTGC

mRNA sequence

CAAAATGCAGTGTCTTTATAATAATAATTATTATTATTATTATGATTTGAACCAAGAATAACAAACAGGCAGAAACCAAGGTGATATTAAAGCCATTGTAAGAGAGATCGAAGAGAAAGAGAGGCCGAAAACGATGTCGTTCGAGGAGACAGAGCTGAGGCTAGGGCTGCCTGGGAGAGAAATACTGACAAGGAAGAGAGGGTTTCATGAAACTGCTGCAATGGAAGGTTTGAAGCTTAATCTAACTTCTTCTACTAAAGAAGAAGCCTCTTATCATGGGTTGGATCCAAATCCCAAGCCTCCCCCACCCAAGATGGAGGTGGTGGGTTGGCCACCACTAAGGACAAACAGAAAAAACATAGTGATGCTCCAAAAGGGAAAAAACAGATCATCATCATCAGAGGAATTATTATTAGAGAATAATAATAGCAATAATAATAATGGAGGGTGGTTTGTGAAGGTTAGCGTTGATGGAGCACCTTATCTTCGCAAGGTGGACTTAAGCATCTTCAATTCCTACAAACAACTCTCTCTTGCACTCGCCACCCTATTTGCTCCCTTCACCATTATTCGTAATTTATTTCCCTCTTTCACTTTACCCCTTCATTTACTTTTAATCAAATGTTTCAAAGCTACTAATTAATACATCCATTTGTTGAGAATCTTCTGTTATAATTATCAAACTTATGACTCTTACATCAAACAAATTTCTTAACCTACGATATAGAGAATTTTGAATCTCCAAAGTATGCTCATTTATGACTCGTTTGATAACCATTTTGTTTTTTGTTTATGAAATTGAAATCTATTCTATTCAAATTTCCTACCATGTGCTCTATCTTTCCTACAATATATCCATCTTTCCTTAAGAAAGTAGGAGAATACCAACCAAATTTCAAAAACATAAACAAGTTTTTGGAAGCTACTTTTTTTTGTTTACAAATTTTGGTTTTGTTTATCAAAATATAGGTAAGATGTAGATATCTAAATAAGGAAAAAGGTATAACAAGGTAGTTGTCGTAGGCTTAAATTTCATAAACAAAAAAAGAAAAACAAAATGGTTATCAAACGGGGTCTTAAATGTTCCCAAATTCAAAATCTTCAAATGAGTACAGGTGAAAATCCTTTGTTTGTCGATTGCATTCGAAATTTGGGATCGGTAGATGTAGTGGGACCAACTATTAAACTAAATGGGTTCCTAAAGGGTAGGCGGCCCCAATTTTTCTTCATACAGCTAGACTAATTGAAAGTTCTAAGAATAAATTTAGGGACTTATTAAATCACAAGTATACTTCATGATCTTCTAAGGCAACTAAAATATTCCTTTGAAAGTCATGAGCTTTCATTGTGGGTTGATCAATTAAAATTGTTCTACAACATAAAATGTCAAACGATCGTTATGTCATTAAAGAAAAAAAAACACAAATTATAACTGATCTGGACATGTGTTGAAGTTTAGGAAAATCTAGAATATGAATATTTTTATGCATGAAATTTTAAGTTGTTATTGAAGTGTAGGAATTAAAATGATGGTTTTTGTTTTATTTTCCTTTTAATGTGTATATATCATAAGGTAACTGTGGATCCCAAGCTGCTGGGATGAAAGATGTTTTAGATGGTTTTGATTATGTTCACACCTATCAAGACAAGGATGGAGATTGGATGCTTGTTGGAGATGTTCCATGGCAAATGTTTGTGGAATCTTGCAAGCGTCTACGCATCATGAAAGGAAAGGAAGCCATTGGACTTGCACCAAGGACTATAGAGAAGTGCAAGCTGAACTGCAAGAGCTAACTTCATATTTGATGTTTCCAAGAAAATGCATGCATGGCCGTTATGCAAATGAATATAGTCTGGGTTTGGGACAGATTCGGTTGGTGTCTTTATAATTTCAAAAGATACGTAATGGGTTTGGAATGAATTAAGCAAAAATTATTAGGATGTATTTAATGTGAGATTATAATTTGTATCTAAGATATAATAATGTGC

Coding sequence (CDS)

ATGTCGTTCGAGGAGACAGAGCTGAGGCTAGGGCTGCCTGGGAGAGAAATACTGACAAGGAAGAGAGGGTTTCATGAAACTGCTGCAATGGAAGGTTTGAAGCTTAATCTAACTTCTTCTACTAAAGAAGAAGCCTCTTATCATGGGTTGGATCCAAATCCCAAGCCTCCCCCACCCAAGATGGAGGTGGTGGGTTGGCCACCACTAAGGACAAACAGAAAAAACATAGTGATGCTCCAAAAGGGAAAAAACAGATCATCATCATCAGAGGAATTATTATTAGAGAATAATAATAGCAATAATAATAATGGAGGGTGGTTTGTGAAGGTTAGCGTTGATGGAGCACCTTATCTTCGCAAGGTGGACTTAAGCATCTTCAATTCCTACAAACAACTCTCTCTTGCACTCGCCACCCTATTTGCTCCCTTCACCATTATTCGTAATTTATTTCCCTCTTTCACTTTACCCCTTCATTTACTTTTAATCAAATGTTTCAAAGCTACTAATTAA

Protein sequence

MSFEETELRLGLPGREILTRKRGFHETAAMEGLKLNLTSSTKEEASYHGLDPNPKPPPPKMEVVGWPPLRTNRKNIVMLQKGKNRSSSSEELLLENNNSNNNNGGWFVKVSVDGAPYLRKVDLSIFNSYKQLSLALATLFAPFTIIRNLFPSFTLPLHLLLIKCFKATN

Homology

[Close]

BLAST of Sed0011970.2 vs. NCBI nr
Match: XP_022931155.1 (auxin-responsive protein IAA16-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 152.9 bits (385), Expect = 2.4e-33
Identity = 90/149 (60.40%), Postives = 107/149 (71.81%), Query Frame = 0


Query: 1   MSFEETELRLGLPGR-EILTRKRGFHETAAMEGLKLNLTSSTKEEASYHGLDPNPKPPPP 60
           MSFEETELRLGLPG    + RKRGFHETAA   + +   +  K EASY GLDPNPKPPPP
Sbjct: 32  MSFEETELRLGLPGNGREMARKRGFHETAAETMITM---AELKLEASY-GLDPNPKPPPP 91

Query: 61  KMEVVGWPPLRTNRKNIVMLQKGKNRSSSSEELLLENNNSNNNNGG---WFVKVSVDGAP 120
           K +VVGWPP+R+ RKN + LQKG    ++SE+ ++ +   N  N      FVKVS+DGAP
Sbjct: 92  KGQVVGWPPIRSYRKNRLSLQKG----TTSEDEIISDEQKNIGNAAAAVRFVKVSLDGAP 151

Query: 121 YLRKVDLSIFNSYKQLSLALATLFAPFTI 146
           YLRKVD S ++SYKQLS ALA LF PFTI
Sbjct: 152 YLRKVDFSRYSSYKQLSDALAKLFGPFTI 172

[Close]

BLAST of Sed0011970.2 vs. NCBI nr
Match: XP_022931154.1 (auxin-responsive protein IAA16-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 152.9 bits (385), Expect = 2.4e-33
Identity = 90/149 (60.40%), Postives = 107/149 (71.81%), Query Frame = 0


Query: 1   MSFEETELRLGLPGR-EILTRKRGFHETAAMEGLKLNLTSSTKEEASYHGLDPNPKPPPP 60
           MSFEETELRLGLPG    + RKRGFHETAA   + +   +  K EASY GLDPNPKPPPP
Sbjct: 32  MSFEETELRLGLPGNGREMARKRGFHETAAETMITM---AELKLEASY-GLDPNPKPPPP 91

Query: 61  KMEVVGWPPLRTNRKNIVMLQKGKNRSSSSEELLLENNNSNNNNGG---WFVKVSVDGAP 120
           K +VVGWPP+R+ RKN + LQKG    ++SE+ ++ +   N  N      FVKVS+DGAP
Sbjct: 92  KGQVVGWPPIRSYRKNRLSLQKG----TTSEDEIISDEQKNIGNAAAAVRFVKVSLDGAP 151

Query: 121 YLRKVDLSIFNSYKQLSLALATLFAPFTI 146
           YLRKVD S ++SYKQLS ALA LF PFTI
Sbjct: 152 YLRKVDFSRYSSYKQLSDALAKLFGPFTI 172

[Close]

BLAST of Sed0011970.2 vs. NCBI nr
Match: KAG6606400.1 (Auxin-responsive protein IAA16, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 152.5 bits (384), Expect = 3.2e-33
Identity = 90/150 (60.00%), Postives = 107/150 (71.33%), Query Frame = 0


Query: 1   MSFEETELRLGLPGR-EILTRKRGFHETAAMEGLKLNLTSSTKEEASYHGLDPNPKPPPP 60
           MSFEETELRLGLPG    + RKRGFHETAA   + +   +  K EASY GLDPNPKPPPP
Sbjct: 1   MSFEETELRLGLPGNGREMARKRGFHETAAETMITM---AELKLEASY-GLDPNPKPPPP 60

Query: 61  KMEVVGWPPLRTNRKNIVMLQKGKNRSSSSEELLLENNNSNNNNGG----WFVKVSVDGA 120
           K +VVGWPP+R+ RKN + LQKG    ++SE+ ++ +   N  N       FVKVS+DGA
Sbjct: 61  KGQVVGWPPIRSYRKNRLSLQKG----TTSEDEIISDEQKNIGNAAAAAVRFVKVSLDGA 120

Query: 121 PYLRKVDLSIFNSYKQLSLALATLFAPFTI 146
           PYLRKVD S ++SYKQLS ALA LF PFTI
Sbjct: 121 PYLRKVDFSRYSSYKQLSDALAKLFGPFTI 142

[Close]

BLAST of Sed0011970.2 vs. NCBI nr
Match: XP_022995772.1 (auxin-responsive protein IAA16-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 150.2 bits (378), Expect = 1.6e-32
Identity = 90/146 (61.64%), Postives = 103/146 (70.55%), Query Frame = 0


Query: 1   MSFEETELRLGLPGR-EILTRKRGFHETAAMEGLKLNLTSSTKEEASYHGLDPNPKPPPP 60
           MSFEETELRLGLPG    + RKRGF ETAA   + +   +  K EASY GLDPNPKPPPP
Sbjct: 32  MSFEETELRLGLPGNGREMARKRGFPETAAETMVTM---ADLKLEASY-GLDPNPKPPPP 91

Query: 61  KMEVVGWPPLRTNRKNIVMLQKGKNRSSSSEELLLENNNSNNNNGGWFVKVSVDGAPYLR 120
           K +VVGWPP+R+ RKN + LQKG   +S  E +  E  N  N     FVKVS+DGAPYLR
Sbjct: 92  KEQVVGWPPIRSYRKNRLSLQKG--TTSEDEIISDEQKNIGNAAAVRFVKVSLDGAPYLR 151

Query: 121 KVDLSIFNSYKQLSLALATLFAPFTI 146
           KVD S ++SYKQLS ALA LF PFTI
Sbjct: 152 KVDFSTYSSYKQLSDALAKLFGPFTI 171

[Close]

BLAST of Sed0011970.2 vs. NCBI nr
Match: XP_022995774.1 (auxin-induced protein AUX28-like isoform X3 [Cucurbita maxima] >XP_022995775.1 auxin-induced protein AUX28-like isoform X3 [Cucurbita maxima])

HSP 1 Score: 150.2 bits (378), Expect = 1.6e-32
Identity = 90/146 (61.64%), Postives = 103/146 (70.55%), Query Frame = 0


Query: 1   MSFEETELRLGLPGR-EILTRKRGFHETAAMEGLKLNLTSSTKEEASYHGLDPNPKPPPP 60
           MSFEETELRLGLPG    + RKRGF ETAA   + +   +  K EASY GLDPNPKPPPP
Sbjct: 1   MSFEETELRLGLPGNGREMARKRGFPETAAETMVTM---ADLKLEASY-GLDPNPKPPPP 60

Query: 61  KMEVVGWPPLRTNRKNIVMLQKGKNRSSSSEELLLENNNSNNNNGGWFVKVSVDGAPYLR 120
           K +VVGWPP+R+ RKN + LQKG   +S  E +  E  N  N     FVKVS+DGAPYLR
Sbjct: 61  KEQVVGWPPIRSYRKNRLSLQKG--TTSEDEIISDEQKNIGNAAAVRFVKVSLDGAPYLR 120

Query: 121 KVDLSIFNSYKQLSLALATLFAPFTI 146
           KVD S ++SYKQLS ALA LF PFTI
Sbjct: 121 KVDFSTYSSYKQLSDALAKLFGPFTI 140

[Close]

BLAST of Sed0011970.2 vs. ExPASy Swiss-Prot
Match: P13089 (Auxin-induced protein AUX28 OS=Glycine max OX=3847 GN=AUX28 PE=2 SV=1)

HSP 1 Score: 111.7 bits (278), Expect = 8.2e-24
Identity = 75/172 (43.60%), Postives = 95/172 (55.23%), Query Frame = 0


Query: 1   MSFEETELRLGLPG----REILTRKRGFHET--------AAMEGLKLNLTSSTKEEASYH 60
           M FEETELRLGLPG     E+L RKRGF ET        A    L LNL+S      +  
Sbjct: 1   MGFEETELRLGLPGNGGTEEVLIRKRGFSETETGHEDESATTVDLMLNLSSKEAATTAAA 60

Query: 61  GLDP----------------NPKPPPPKMEVVGWPPLRTNRKNIVMLQKGKNRSSSSEEL 120
             DP                +P  PP K +VVGWPP+R+ RKN++ +QK     S     
Sbjct: 61  AADPTDKHKTLPKEKTLLPADPAKPPAKTQVVGWPPVRSFRKNMLAVQKSVGEES----- 120

Query: 121 LLENNNSNNNNGGWFVKVSVDGAPYLRKVDLSIFNSYKQLSLALATLFAPFT 145
             E N+S N +   FVKVS+DGAPYLRKVDL ++ SY++LS +L  +F+ FT
Sbjct: 121 --EKNSSPNAS---FVKVSMDGAPYLRKVDLKMYKSYRELSDSLGKMFSSFT 162

[Close]

BLAST of Sed0011970.2 vs. ExPASy Swiss-Prot
Match: A2XLV9 (Auxin-responsive protein IAA13 OS=Oryza sativa subsp. indica OX=39946 GN=IAA13 PE=2 SV=1)

HSP 1 Score: 103.6 bits (257), Expect = 2.2e-21
Identity = 70/168 (41.67%), Postives = 90/168 (53.57%), Query Frame = 0


Query: 6   TELRLGLPG-------REILTRKRGFHETAAMEGLKLNLTSSTKEEASYHGLD------- 65
           TELRLGLPG             KRGF ET     LKL L ++  EEA+    +       
Sbjct: 10  TELRLGLPGGGGGAAEAAAKAAKRGFEETI---DLKLKLPTAGMEEAAAGKAEAPAAEKA 69

Query: 66  ---------PNPKPPPPKMEVVGWPPLRTNRKNIVMLQ--KGKNRSSSSEELLLENNNSN 125
                       KPP PK + VGWPP+R+ R+NI+ +Q  K K    + ++      N++
Sbjct: 70  KRPAEAAAADAEKPPAPKAQAVGWPPVRSFRRNIMTVQSVKSKKEEEADKQQQQPAANAS 129

Query: 126 NNNGGWFVKVSVDGAPYLRKVDLSIFNSYKQLSLALATLFAPFTIIRN 149
            +N   FVKVS+DGAPYLRKVDL ++NSYK LSLAL  +F  FT   N
Sbjct: 130 GSNSSAFVKVSMDGAPYLRKVDLKMYNSYKDLSLALQKMFGTFTATGN 174

[Close]

BLAST of Sed0011970.2 vs. ExPASy Swiss-Prot
Match: Q10D34 (Auxin-responsive protein IAA13 OS=Oryza sativa subsp. japonica OX=39947 GN=IAA13 PE=2 SV=1)

HSP 1 Score: 103.6 bits (257), Expect = 2.2e-21
Identity = 70/168 (41.67%), Postives = 90/168 (53.57%), Query Frame = 0


Query: 6   TELRLGLPG-------REILTRKRGFHETAAMEGLKLNLTSSTKEEASYHGLD------- 65
           TELRLGLPG             KRGF ET     LKL L ++  EEA+    +       
Sbjct: 10  TELRLGLPGGGGGAAEAAAKAAKRGFEETI---DLKLKLPTAGMEEAAAGKAEAPAAEKA 69

Query: 66  ---------PNPKPPPPKMEVVGWPPLRTNRKNIVMLQ--KGKNRSSSSEELLLENNNSN 125
                       KPP PK + VGWPP+R+ R+NI+ +Q  K K    + ++      N++
Sbjct: 70  KRPAEAAAADAEKPPAPKAQAVGWPPVRSFRRNIMTVQSVKSKKEEEADKQQQQPAANAS 129

Query: 126 NNNGGWFVKVSVDGAPYLRKVDLSIFNSYKQLSLALATLFAPFTIIRN 149
            +N   FVKVS+DGAPYLRKVDL ++NSYK LSLAL  +F  FT   N
Sbjct: 130 GSNSSAFVKVSMDGAPYLRKVDLKMYNSYKDLSLALQKMFGTFTATGN 174

[Close]

BLAST of Sed0011970.2 vs. ExPASy Swiss-Prot
Match: Q38832 (Auxin-responsive protein IAA14 OS=Arabidopsis thaliana OX=3702 GN=IAA14 PE=1 SV=2)

HSP 1 Score: 99.0 bits (245), Expect = 5.5e-20
Identity = 70/162 (43.21%), Postives = 89/162 (54.94%), Query Frame = 0


Query: 1   MSFEETELRLGLPG---------REILTRKRGFHETAAMEGLKLNLTS--------STKE 60
           M+ +ETEL LGLPG         +  +  KRGF ET     LKLNL S        +T  
Sbjct: 1   MNLKETELCLGLPGGTETVESPAKSGVGNKRGFSETV---DLKLNLQSNKQGHVDLNTNG 60

Query: 61  EASYHGLDPNPKPPPPKMEVVGWPPLRTNRKNIVMLQKGKNRSSSSEELLLENNNSNNNN 120
                    +P  PP K +VVGWPP+R  RKN++  QK    S  +EE +     S+   
Sbjct: 61  APKEKTFLKDPSKPPAKAQVVGWPPVRNYRKNVMANQK----SGEAEEAM-----SSGGG 120

Query: 121 GGWFVKVSVDGAPYLRKVDLSIFNSYKQLSLALATLFAPFTI 146
              FVKVS+DGAPYLRKVDL ++ SYK LS ALA +F+ FT+
Sbjct: 121 TVAFVKVSMDGAPYLRKVDLKMYTSYKDLSDALAKMFSSFTM 150

[Close]

BLAST of Sed0011970.2 vs. ExPASy Swiss-Prot
Match: Q38825 (Auxin-responsive protein IAA7 OS=Arabidopsis thaliana OX=3702 GN=IAA7 PE=1 SV=1)

HSP 1 Score: 96.3 bits (238), Expect = 3.6e-19
Identity = 69/165 (41.82%), Postives = 88/165 (53.33%), Query Frame = 0


Query: 1   MSFEETELRLGLPG---------REILTRKRGFHETAAMEGLKLNLTSSTKEEASYHGLD 60
           M+ + TEL LGLPG         +  +  KRGF ET     L LNL S+ +       + 
Sbjct: 6   MNLKATELCLGLPGGAEAVESPAKSAVGSKRGFSETV---DLMLNLQSNKEGSVDLKNVS 65

Query: 61  PNPK---------PPPPKMEVVGWPPLRTNRKNIVMLQKGKNRSSSSEELLLE--NNNSN 120
             PK          PP K +VVGWPP+R  RKN++  QK    SS +EE   E   N   
Sbjct: 66  AVPKEKTTLKDPSKPPAKAQVVGWPPVRNYRKNMMTQQK---TSSGAEEASSEKAGNFGG 125

Query: 121 NNNGGWFVKVSVDGAPYLRKVDLSIFNSYKQLSLALATLFAPFTI 146
              G   VKVS+DGAPYLRKVDL ++ SY+ LS ALA +F+ FT+
Sbjct: 126 GAAGAGLVKVSMDGAPYLRKVDLKMYKSYQDLSDALAKMFSSFTM 164

[Close]

BLAST of Sed0011970.2 vs. ExPASy TrEMBL
Match: A0A6J1EYP0 (Auxin-responsive protein OS=Cucurbita moschata OX=3662 GN=LOC111437421 PE=3 SV=1)

HSP 1 Score: 152.9 bits (385), Expect = 1.2e-33
Identity = 90/149 (60.40%), Postives = 107/149 (71.81%), Query Frame = 0


Query: 1   MSFEETELRLGLPGR-EILTRKRGFHETAAMEGLKLNLTSSTKEEASYHGLDPNPKPPPP 60
           MSFEETELRLGLPG    + RKRGFHETAA   + +   +  K EASY GLDPNPKPPPP
Sbjct: 32  MSFEETELRLGLPGNGREMARKRGFHETAAETMITM---AELKLEASY-GLDPNPKPPPP 91

Query: 61  KMEVVGWPPLRTNRKNIVMLQKGKNRSSSSEELLLENNNSNNNNGG---WFVKVSVDGAP 120
           K +VVGWPP+R+ RKN + LQKG    ++SE+ ++ +   N  N      FVKVS+DGAP
Sbjct: 92  KGQVVGWPPIRSYRKNRLSLQKG----TTSEDEIISDEQKNIGNAAAAVRFVKVSLDGAP 151

Query: 121 YLRKVDLSIFNSYKQLSLALATLFAPFTI 146
           YLRKVD S ++SYKQLS ALA LF PFTI
Sbjct: 152 YLRKVDFSRYSSYKQLSDALAKLFGPFTI 172

[Close]

BLAST of Sed0011970.2 vs. ExPASy TrEMBL
Match: A0A6J1ETJ1 (Auxin-responsive protein OS=Cucurbita moschata OX=3662 GN=LOC111437421 PE=3 SV=1)

HSP 1 Score: 152.9 bits (385), Expect = 1.2e-33
Identity = 90/149 (60.40%), Postives = 107/149 (71.81%), Query Frame = 0


Query: 1   MSFEETELRLGLPGR-EILTRKRGFHETAAMEGLKLNLTSSTKEEASYHGLDPNPKPPPP 60
           MSFEETELRLGLPG    + RKRGFHETAA   + +   +  K EASY GLDPNPKPPPP
Sbjct: 32  MSFEETELRLGLPGNGREMARKRGFHETAAETMITM---AELKLEASY-GLDPNPKPPPP 91

Query: 61  KMEVVGWPPLRTNRKNIVMLQKGKNRSSSSEELLLENNNSNNNNGG---WFVKVSVDGAP 120
           K +VVGWPP+R+ RKN + LQKG    ++SE+ ++ +   N  N      FVKVS+DGAP
Sbjct: 92  KGQVVGWPPIRSYRKNRLSLQKG----TTSEDEIISDEQKNIGNAAAAVRFVKVSLDGAP 151

Query: 121 YLRKVDLSIFNSYKQLSLALATLFAPFTI 146
           YLRKVD S ++SYKQLS ALA LF PFTI
Sbjct: 152 YLRKVDFSRYSSYKQLSDALAKLFGPFTI 172

[Close]

BLAST of Sed0011970.2 vs. ExPASy TrEMBL
Match: A0A6J1K6V6 (Auxin-responsive protein OS=Cucurbita maxima OX=3661 GN=LOC111491207 PE=3 SV=1)

HSP 1 Score: 150.2 bits (378), Expect = 7.7e-33
Identity = 90/146 (61.64%), Postives = 103/146 (70.55%), Query Frame = 0


Query: 1   MSFEETELRLGLPGR-EILTRKRGFHETAAMEGLKLNLTSSTKEEASYHGLDPNPKPPPP 60
           MSFEETELRLGLPG    + RKRGF ETAA   + +   +  K EASY GLDPNPKPPPP
Sbjct: 1   MSFEETELRLGLPGNGREMARKRGFPETAAETMVTM---ADLKLEASY-GLDPNPKPPPP 60

Query: 61  KMEVVGWPPLRTNRKNIVMLQKGKNRSSSSEELLLENNNSNNNNGGWFVKVSVDGAPYLR 120
           K +VVGWPP+R+ RKN + LQKG   +S  E +  E  N  N     FVKVS+DGAPYLR
Sbjct: 61  KEQVVGWPPIRSYRKNRLSLQKG--TTSEDEIISDEQKNIGNAAAVRFVKVSLDGAPYLR 120

Query: 121 KVDLSIFNSYKQLSLALATLFAPFTI 146
           KVD S ++SYKQLS ALA LF PFTI
Sbjct: 121 KVDFSTYSSYKQLSDALAKLFGPFTI 140

[Close]

BLAST of Sed0011970.2 vs. ExPASy TrEMBL
Match: A0A6J1K8Z8 (Auxin-responsive protein OS=Cucurbita maxima OX=3661 GN=LOC111491207 PE=3 SV=1)

HSP 1 Score: 150.2 bits (378), Expect = 7.7e-33
Identity = 90/146 (61.64%), Postives = 103/146 (70.55%), Query Frame = 0


Query: 1   MSFEETELRLGLPGR-EILTRKRGFHETAAMEGLKLNLTSSTKEEASYHGLDPNPKPPPP 60
           MSFEETELRLGLPG    + RKRGF ETAA   + +   +  K EASY GLDPNPKPPPP
Sbjct: 32  MSFEETELRLGLPGNGREMARKRGFPETAAETMVTM---ADLKLEASY-GLDPNPKPPPP 91

Query: 61  KMEVVGWPPLRTNRKNIVMLQKGKNRSSSSEELLLENNNSNNNNGGWFVKVSVDGAPYLR 120
           K +VVGWPP+R+ RKN + LQKG   +S  E +  E  N  N     FVKVS+DGAPYLR
Sbjct: 92  KEQVVGWPPIRSYRKNRLSLQKG--TTSEDEIISDEQKNIGNAAAVRFVKVSLDGAPYLR 151

Query: 121 KVDLSIFNSYKQLSLALATLFAPFTI 146
           KVD S ++SYKQLS ALA LF PFTI
Sbjct: 152 KVDFSTYSSYKQLSDALAKLFGPFTI 171

[Close]

BLAST of Sed0011970.2 vs. ExPASy TrEMBL
Match: A0A6J1JZW8 (Auxin-responsive protein OS=Cucurbita maxima OX=3661 GN=LOC111491207 PE=3 SV=1)

HSP 1 Score: 150.2 bits (378), Expect = 7.7e-33
Identity = 90/146 (61.64%), Postives = 103/146 (70.55%), Query Frame = 0


Query: 1   MSFEETELRLGLPGR-EILTRKRGFHETAAMEGLKLNLTSSTKEEASYHGLDPNPKPPPP 60
           MSFEETELRLGLPG    + RKRGF ETAA   + +   +  K EASY GLDPNPKPPPP
Sbjct: 32  MSFEETELRLGLPGNGREMARKRGFPETAAETMVTM---ADLKLEASY-GLDPNPKPPPP 91

Query: 61  KMEVVGWPPLRTNRKNIVMLQKGKNRSSSSEELLLENNNSNNNNGGWFVKVSVDGAPYLR 120
           K +VVGWPP+R+ RKN + LQKG   +S  E +  E  N  N     FVKVS+DGAPYLR
Sbjct: 92  KEQVVGWPPIRSYRKNRLSLQKG--TTSEDEIISDEQKNIGNAAAVRFVKVSLDGAPYLR 151

Query: 121 KVDLSIFNSYKQLSLALATLFAPFTI 146
           KVD S ++SYKQLS ALA LF PFTI
Sbjct: 152 KVDFSTYSSYKQLSDALAKLFGPFTI 171

[Close]

BLAST of Sed0011970.2 vs. TAIR 10
Match: AT4G14550.1 (indole-3-acetic acid inducible 14 )

HSP 1 Score: 99.0 bits (245), Expect = 3.9e-21
Identity = 70/162 (43.21%), Postives = 89/162 (54.94%), Query Frame = 0


Query: 1   MSFEETELRLGLPG---------REILTRKRGFHETAAMEGLKLNLTS--------STKE 60
           M+ +ETEL LGLPG         +  +  KRGF ET     LKLNL S        +T  
Sbjct: 1   MNLKETELCLGLPGGTETVESPAKSGVGNKRGFSETV---DLKLNLQSNKQGHVDLNTNG 60

Query: 61  EASYHGLDPNPKPPPPKMEVVGWPPLRTNRKNIVMLQKGKNRSSSSEELLLENNNSNNNN 120
                    +P  PP K +VVGWPP+R  RKN++  QK    S  +EE +     S+   
Sbjct: 61  APKEKTFLKDPSKPPAKAQVVGWPPVRNYRKNVMANQK----SGEAEEAM-----SSGGG 120

Query: 121 GGWFVKVSVDGAPYLRKVDLSIFNSYKQLSLALATLFAPFTI 146
              FVKVS+DGAPYLRKVDL ++ SYK LS ALA +F+ FT+
Sbjct: 121 TVAFVKVSMDGAPYLRKVDLKMYTSYKDLSDALAKMFSSFTM 150

[Close]

BLAST of Sed0011970.2 vs. TAIR 10
Match: AT3G23050.2 (indole-3-acetic acid 7 )

HSP 1 Score: 96.3 bits (238), Expect = 2.5e-20
Identity = 69/165 (41.82%), Postives = 88/165 (53.33%), Query Frame = 0


Query: 1   MSFEETELRLGLPG---------REILTRKRGFHETAAMEGLKLNLTSSTKEEASYHGLD 60
           M+ + TEL LGLPG         +  +  KRGF ET     L LNL S+ +       + 
Sbjct: 6   MNLKATELCLGLPGGAEAVESPAKSAVGSKRGFSETV---DLMLNLQSNKEGSVDLKNVS 65

Query: 61  PNPK---------PPPPKMEVVGWPPLRTNRKNIVMLQKGKNRSSSSEELLLE--NNNSN 120
             PK          PP K +VVGWPP+R  RKN++  QK    SS +EE   E   N   
Sbjct: 66  AVPKEKTTLKDPSKPPAKAQVVGWPPVRNYRKNMMTQQK---TSSGAEEASSEKAGNFGG 125

Query: 121 NNNGGWFVKVSVDGAPYLRKVDLSIFNSYKQLSLALATLFAPFTI 146
              G   VKVS+DGAPYLRKVDL ++ SY+ LS ALA +F+ FT+
Sbjct: 126 GAAGAGLVKVSMDGAPYLRKVDLKMYKSYQDLSDALAKMFSSFTM 164

[Close]

BLAST of Sed0011970.2 vs. TAIR 10
Match: AT3G23050.1 (indole-3-acetic acid 7 )

HSP 1 Score: 96.3 bits (238), Expect = 2.5e-20
Identity = 69/165 (41.82%), Postives = 88/165 (53.33%), Query Frame = 0


Query: 1   MSFEETELRLGLPG---------REILTRKRGFHETAAMEGLKLNLTSSTKEEASYHGLD 60
           M+ + TEL LGLPG         +  +  KRGF ET     L LNL S+ +       + 
Sbjct: 6   MNLKATELCLGLPGGAEAVESPAKSAVGSKRGFSETV---DLMLNLQSNKEGSVDLKNVS 65

Query: 61  PNPK---------PPPPKMEVVGWPPLRTNRKNIVMLQKGKNRSSSSEELLLE--NNNSN 120
             PK          PP K +VVGWPP+R  RKN++  QK    SS +EE   E   N   
Sbjct: 66  AVPKEKTTLKDPSKPPAKAQVVGWPPVRNYRKNMMTQQK---TSSGAEEASSEKAGNFGG 125

Query: 121 NNNGGWFVKVSVDGAPYLRKVDLSIFNSYKQLSLALATLFAPFTI 146
              G   VKVS+DGAPYLRKVDL ++ SY+ LS ALA +F+ FT+
Sbjct: 126 GAAGAGLVKVSMDGAPYLRKVDLKMYKSYQDLSDALAKMFSSFTM 164

[Close]

BLAST of Sed0011970.2 vs. TAIR 10
Match: AT3G04730.1 (indoleacetic acid-induced protein 16 )

HSP 1 Score: 95.9 bits (237), Expect = 3.3e-20
Identity = 67/166 (40.36%), Postives = 96/166 (57.83%), Query Frame = 0


Query: 1   MSFEETELRLGLP----GREILTR---KRGFHETAAMEGLKLNLTSSTKEEASYHGLDPN 60
           ++FE TELRLGLP    G E+  +   KRGF ET     LKLNL+S+  +  S   L+  
Sbjct: 2   INFEATELRLGLPGGNHGGEMAGKNNGKRGFSETV---DLKLNLSSTAMDSVSKVDLENM 61

Query: 61  PK---PPPPKMEVVGWPPLRTNRKNIVMLQKGKNRSSSSEELLLENNNSNNNNGG----- 120
            +    PP K +VVGWPP+R+ RKN++  QK     ++      E N+  + + G     
Sbjct: 62  KEKVVKPPAKAQVVGWPPVRSFRKNVMSGQKPTTGDAT------EGNDKTSGSSGATSSA 121

Query: 121 ------WFVKVSVDGAPYLRKVDLSIFNSYKQLSLALATLFAPFTI 146
                  +VKVS+DGAPYLRK+DL ++ +Y+ LS AL+ +F+ FTI
Sbjct: 122 SACATVAYVKVSMDGAPYLRKIDLKLYKTYQDLSNALSKMFSSFTI 158

[Close]

BLAST of Sed0011970.2 vs. TAIR 10
Match: AT1G04250.1 (AUX/IAA transcriptional regulator family protein )

HSP 1 Score: 94.4 bits (233), Expect = 9.6e-20
Identity = 63/161 (39.13%), Postives = 88/161 (54.66%), Query Frame = 0


Query: 1   MSFEETELRLGLPGRE----ILTRKRGFHETAAMEGLKLNLTSSTKEEASYHGL------ 60
           ++  ETEL LGLPG +    +   KRGF ET  ++ L LN   + KE ++ H +      
Sbjct: 7   LNLRETELCLGLPGGDTVAPVTGNKRGFSETVDLK-LNLNNEPANKEGSTTHDVVTFDSK 66

Query: 61  -----DPNPKPPPPKMEVVGWPPLRTNRKNI-VMLQKGKNRSSSSEELLLENNNSNNNNG 120
                  +P  PP K +VVGWPP+R+ RKN+ V  QK                +S     
Sbjct: 67  EKSACPKDPAKPPAKAQVVGWPPVRSYRKNVMVSCQK----------------SSGGPEA 126

Query: 121 GWFVKVSVDGAPYLRKVDLSIFNSYKQLSLALATLFAPFTI 146
             FVKVS+DGAPYLRK+DL ++ SY +LS AL+ +F+ FT+
Sbjct: 127 AAFVKVSMDGAPYLRKIDLRMYKSYDELSNALSNMFSSFTM 150

The following BLAST results are available for this feature:

BLAST of Sed0011970.2 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022931155.1	2.4e-33	60.40	auxin-responsive protein IAA16-like isoform X2 [Cucurbita moschata]	[more]
XP_022931154.1	2.4e-33	60.40	auxin-responsive protein IAA16-like isoform X1 [Cucurbita moschata]	[more]
KAG6606400.1	3.2e-33	60.00	Auxin-responsive protein IAA16, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022995772.1	1.6e-32	61.64	auxin-responsive protein IAA16-like isoform X1 [Cucurbita maxima]	[more]
XP_022995774.1	1.6e-32	61.64	auxin-induced protein AUX28-like isoform X3 [Cucurbita maxima] >XP_022995775.1 a...	[more]

BLAST of Sed0011970.2 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P13089	8.2e-24	43.60	Auxin-induced protein AUX28 OS=Glycine max OX=3847 GN=AUX28 PE=2 SV=1	[more]
A2XLV9	2.2e-21	41.67	Auxin-responsive protein IAA13 OS=Oryza sativa subsp. indica OX=39946 GN=IAA13 P...	[more]
Q10D34	2.2e-21	41.67	Auxin-responsive protein IAA13 OS=Oryza sativa subsp. japonica OX=39947 GN=IAA13...	[more]
Q38832	5.5e-20	43.21	Auxin-responsive protein IAA14 OS=Arabidopsis thaliana OX=3702 GN=IAA14 PE=1 SV=...	[more]
Q38825	3.6e-19	41.82	Auxin-responsive protein IAA7 OS=Arabidopsis thaliana OX=3702 GN=IAA7 PE=1 SV=1	[more]

BLAST of Sed0011970.2 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EYP0	1.2e-33	60.40	Auxin-responsive protein OS=Cucurbita moschata OX=3662 GN=LOC111437421 PE=3 SV=1	[more]
A0A6J1ETJ1	1.2e-33	60.40	Auxin-responsive protein OS=Cucurbita moschata OX=3662 GN=LOC111437421 PE=3 SV=1	[more]
A0A6J1K6V6	7.7e-33	61.64	Auxin-responsive protein OS=Cucurbita maxima OX=3661 GN=LOC111491207 PE=3 SV=1	[more]
A0A6J1K8Z8	7.7e-33	61.64	Auxin-responsive protein OS=Cucurbita maxima OX=3661 GN=LOC111491207 PE=3 SV=1	[more]
A0A6J1JZW8	7.7e-33	61.64	Auxin-responsive protein OS=Cucurbita maxima OX=3661 GN=LOC111491207 PE=3 SV=1	[more]

BLAST of Sed0011970.2 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G14550.1	3.9e-21	43.21	indole-3-acetic acid inducible 14	[more]
AT3G23050.2	2.5e-20	41.82	indole-3-acetic acid 7	[more]
AT3G23050.1	2.5e-20	41.82	indole-3-acetic acid 7	[more]
AT3G04730.1	3.3e-20	40.36	indoleacetic acid-induced protein 16	[more]
AT1G04250.1	9.6e-20	39.13	AUX/IAA transcriptional regulator family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR033389	AUX/IAA domain	PFAM	PF02309	AUX_IAA	coord: 20..145 e-value: 2.1E-29 score: 103.1
None	No IPR available	GENE3D	3.10.20.90		coord: 99..153 e-value: 2.0E-11 score: 45.7
None	No IPR available	PANTHER	PTHR31734:SF169	AUXIN-RESPONSIVE PROTEIN IAA13	coord: 2..145
IPR003311	AUX/IAA protein	PANTHER	PTHR31734	AUXIN-RESPONSIVE PROTEIN IAA17	coord: 2..145

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Sed0011970	Sed0011970	gene

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0011970.2-five_prime_utr	Sed0011970.2-five_prime_utr-LG05:421862..421994	five_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0011970.2-exon	Sed0011970.2-exon-LG05:421862..422173	exon
Sed0011970.2-exon	Sed0011970.2-exon-LG05:422921..424296	exon
Sed0011970.2-exon	Sed0011970.2-exon-LG05:424446..424507	exon
Sed0011970.2-exon	Sed0011970.2-exon-LG05:425050..425288	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0011970.2-cds	Sed0011970.2-cds-LG05:421995..422173	CDS
Sed0011970.2-cds	Sed0011970.2-cds-LG05:422921..423251	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0011970.2-three_prime_utr	Sed0011970.2-three_prime_utr-LG05:423252..424296	three_prime_UTR
Sed0011970.2-three_prime_utr	Sed0011970.2-three_prime_utr-LG05:424446..424507	three_prime_UTR
Sed0011970.2-three_prime_utr	Sed0011970.2-three_prime_utr-LG05:425050..425288	three_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Sed0011970.2	Sed0011970.2-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0005515	protein binding