Sed0011970 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CAAAATGCAGTGTCTTTATAATAATAATTATTATTATTATTATGATTTGAACCAAGAATAACAAACAGGCAGAAACCAAGGTGATATTAAAGCCATTGTAAGAGAGATCGAAGAGAAAGAGAGGCCGAAAACGATGTCGTTCGAGGAGACAGAGCTGAGGCTAGGGCTGCCTGGGAGAGAAATACTGACAAGGAAGAGAGGGTTTCATGAAACTGCTGCAATGGAAGGTTTGAAGCTTAATCTAACTTCTTCTACTAAAGAAGAAGCCTCTTATCATGGGTTGGATCCAAATCCCAAGCCTCCCCCACCCAAGTAAGTACTTTTTAATTGCCCTTCAAATAATTAACATTATCCTTTCTAGCATTTTTTTTTAGAATTTGGCTAAAAAATCAAAGGTTTCTTGAGGATAAAAACTGTAGTAAAACAAAATTTGGAAAGAAATGAGTACAAACTTTAACAAACATAAAACAAAATAAGTAGGTTATTTAGGGAAGAAAGTTAAACATGTAATTGGTTCAAGATGAATAAGAATATGAAACTATATTTTTTTAATATTCATGACTGTCTTGGTCAACTTGCGTACACCTAGACTAATGTCAATGTTCATACTACTTAGCCCTACATCATTTGGATGTGAAGGTAATTTGTAGAAAATTTTAATTCCTAAGTAGGTAACTTCTATAGATTGATCCTATTATTTCTGAACTCTCCAAAACCCTTTTAACCGCTAAGCCAAATTTTATGGTGGTTAAGAAGAGGTGTGGAACTAAATAATGTAATTGTAGGTATATTTTGGTAGGGCATATGAGAGAACTCAAAACCAATTGATATGGGAGTGTACTAGCACATCTATTTTAGGAATAATATTGTGAGGTATCTTCATATTTTCTAAATAAAGTCTTCTTAAAGATGATCGATTCTTCTAATATACGTTTAAGTTTAATGAACCATGATACCATATTGATTTTATAACAAAATTGATTGATAGTAATTCATCTACTTTATAAATATTTATAAAGTATATATAAATTCAAGTGTCTAATGTGAGATCCTTAACAGGATGGAGGTGGTGGGTTGGCCACCACTAAGGACAAACAGAAAAAACATAGTGATGCTCCAAAAGGGAAAAAACAGATCATCATCATCAGAGGAATTATTATTAGAGAATAATAATAGCAATAATAATAATGGAGGGTGGTTTGTGAAGGTTAGCGTTGATGGAGCACCTTATCTTCGCAAGGTGGACTTAAGCATCTTCAATTCCTACAAACAACTCTCTCTTGCACTCGCCACCCTATTTGCTCCCTTCACCATTATTCGTAATTTATTTCCCTCTTTCACTTTACCCCTTCATTTACTTTTAATCAAATGTTTCAAAGCTACTAATTAATACATCCATTTGTTGAGAATCTTCTGTTATAATTATCAAACTTATGACTCTTACATCAAACAAATTTCTTAACCTACGATATAGAGAATTTTGAATCTCCAAAGTATGCTCATTTATGACTCGTTTGATAACCATTTTGTTTTTTGTTTATGAAATTGAAATCTATTCTATTCAAATTTCCTACCATGTGCTCTATCTTTCCTACAATATATCCATCTTTCCTTAAGAAAGTAGGAGAATACCAACCAAATTTCAAAAACATAAACAAGTTTTTGGAAGCTACTTTTTTTTGTTTACAAATTTTGGTTTTGTTTATCAAAATATAGGTAAGATGTAGATATCTAAATAAGGAAAAAGGTATAACAAGGTAGTTGTCGTAGGCTTAAATTTCATAAACAAAAAAAGAAAAACAAAATGGTTATCAAACGGGGTCTTAAATGTTCCCAAATTCAAAATCTTCAAATGAGTACAGGTGAAAATCCTTTGTTTGTCGATTGCATTCGAAATTTGGGATCGGTAGATGTAGTGGGACCAACTATTAAACTAAATGGGTTCCTAAAGGGTAGGCGGCCCCAATTTTTCTTCATACAGCTAGACTAATTGAAAGTTCTAAGAATAAATTTAGGGACTTATTAAATCACAAGTATACTTCATGATCTTCTAAGGCAACTAAAATATTCCTTTGAAAGTCATGAGCTTTCATTGTGGGTTGATCAATTAAAATTGTTCTACAACATAAAATGTCAAACGATCGTTATGTCATTAAAGAAAAAAAAACACAAATTATAACTGATCTGGACATGTGTTGAAGTTTAGGAAAATCTAGAATATGAATATTTTTATGCATGAAATTTTAAGTTGTTATTGAAGTGTAGGAATTAAAATGATGGTTTTTGTTTTATTTTCCTTTTAATGTGTATATATCATAAGGTAACTGTGGATCCCAAGCTGCTGGGATGAAAGATGTTTTAGATGGTTTTGATTATGTTCACACCTATCAAGACAAGGATGGAGATTGGATGCTTGTTGGAGATGTTCCATGGCAGTAAGTCTTATTTTTTCTTTTTATATATCAAACTCTTTAATTATCTTATAATCATATATTTTAGGCTAGATAATTTTTTGATATAGCTTAGGTTAATTCAATTCTATTTTCAAACAGCATAAACTAACTGTGCTTCGATAATCATCCAGAATGTTTGTGGAATCTTGCAAGCGTCTACGCATCATGAAAGGAAAGGAAGCCATTGGACTTGGTAAGATTCATACCTTTTTTTTTTTCTTCATTTTAAATCCGATATCAAATGACAGTGATATGTTTATTAAAACTATATATATATATATATATAAATATATATAAAATCGAAAACGCTCTCCTATGCCTGGGGCACTATTGGTCTGACACCAGGATACTTAAAAGGATATTCTAATTTAAGTGCTTTCCAGCCGCCTCAAACCAGGGATCTCTTAAGAAAGCATGCTTTGAAATCTTTAGTCTCAATCGCTGGACTGCTCCTTGAGGACTGTCCCTAGACTATTAAACCAAGATCATTTAGAGGATATTTTAAATTAAGTGCTCTTTAACAACCTCGAACCAAGTATCTCTCAAAGAAGCATGCTTTGGAGTCGGAAACAACTCAACAATATTTGATATGAAAGATTTGATCCTTCAATTTTTTTTGTTGTCAAATACTACTTTAAAGTCAATTAAGCTCAACTCTACTTAACAACTTTAAAGCCCTTGTAATAACATATATATTGATTTTTTTTTCTTTTCATTTTGGTGTGGGTTTATCAGCACCAAGGACTATAGAGAAGTGCAAGCTGAACTGCAAGAGCTAACTTCATATTTGATGTTTCCAAGAAAATGCATGCATGGCCGTTATGCAAATGAATATAGTCTGGGTTTGGGACAGATTCGGTTGGTGTCTTTATAATTTCAAAAGATACGTAATGGGTTTGGAATGAATTAAGCAAAAATTATTAGGATGTATTTAATGTGAGATTATAATTTGTATCTAAGATATAATAATGTGC CAAAATGCAGTGTCTTTATAATAATAATTATTATTATTATTATGATTTGAACCAAGAATAACAAACAGGCAGAAACCAAGGTGATATTAAAGCCATTGTAAGAGAGATCGAAGAGAAAGAGAGGCCGAAAACGATGTCGTTCGAGGAGACAGAGCTGAGGCTAGGGCTGCCTGGGAGAGAAATACTGACAAGGAAGAGAGGGTTTCATGAAACTGCTGCAATGGAAGGTTTGAAGCTTAATCTAACTTCTTCTACTAAAGAAGAAGCCTCTTATCATGGGTTGGATCCAAATCCCAAGCCTCCCCCACCCAAGATGGAGGTGGTGGGTTGGCCACCACTAAGGACAAACAGAAAAAACATAGTGATGCTCCAAAAGGGAAAAAACAGATCATCATCATCAGAGGAATTATTATTAGAGAATAATAATAGCAATAATAATAATGGAGGGTGGTTTGTGAAGGTTAGCGTTGATGGAGCACCTTATCTTCGCAAGGTGGACTTAAGCATCTTCAATTCCTACAAACAACTCTCTCTTGCACTCGCCACCCTATTTGCTCCCTTCACCATTATTCGTAACTGTGGATCCCAAGCTGCTGGGATGAAAGATGTTTTAGATGGTTTTGATTATGTTCACACCTATCAAGACAAGGATGGAGATTGGATGCTTGTTGGAGATGTTCCATGGCAAATGTTTGTGGAATCTTGCAAGCGTCTACGCATCATGAAAGGAAAGGAAGCCATTGGACTTGCACCAAGGACTATAGAGAAGTGCAAGCTGAACTGCAAGAGCTAACTTCATATTTGATGTTTCCAAGAAAATGCATGCATGGCCGTTATGCAAATGAATATAGTCTGGGTTTGGGACAGATTCGGTTGGTGTCTTTATAATTTCAAAAGATACGTAATGGGTTTGGAATGAATTAAGCAAAAATTATTAGGATGTATTTAATGTGAGATTATAATTTGTATCTAAGATATAATAATGTGC ATGTCGTTCGAGGAGACAGAGCTGAGGCTAGGGCTGCCTGGGAGAGAAATACTGACAAGGAAGAGAGGGTTTCATGAAACTGCTGCAATGGAAGGTTTGAAGCTTAATCTAACTTCTTCTACTAAAGAAGAAGCCTCTTATCATGGGTTGGATCCAAATCCCAAGCCTCCCCCACCCAAGATGGAGGTGGTGGGTTGGCCACCACTAAGGACAAACAGAAAAAACATAGTGATGCTCCAAAAGGGAAAAAACAGATCATCATCATCAGAGGAATTATTATTAGAGAATAATAATAGCAATAATAATAATGGAGGGTGGTTTGTGAAGGTTAGCGTTGATGGAGCACCTTATCTTCGCAAGGTGGACTTAAGCATCTTCAATTCCTACAAACAACTCTCTCTTGCACTCGCCACCCTATTTGCTCCCTTCACCATTATTCGTAACTGTGGATCCCAAGCTGCTGGGATGAAAGATGTTTTAGATGGTTTTGATTATGTTCACACCTATCAAGACAAGGATGGAGATTGGATGCTTGTTGGAGATGTTCCATGGCAAATGTTTGTGGAATCTTGCAAGCGTCTACGCATCATGAAAGGAAAGGAAGCCATTGGACTTGCACCAAGGACTATAGAGAAGTGCAAGCTGAACTGCAAGAGCTAA MSFEETELRLGLPGREILTRKRGFHETAAMEGLKLNLTSSTKEEASYHGLDPNPKPPPPKMEVVGWPPLRTNRKNIVMLQKGKNRSSSSEELLLENNNSNNNNGGWFVKVSVDGAPYLRKVDLSIFNSYKQLSLALATLFAPFTIIRNCGSQAAGMKDVLDGFDYVHTYQDKDGDWMLVGDVPWQMFVESCKRLRIMKGKEAIGLAPRTIEKCKLNCKS Homology
BLAST of Sed0011970 vs. NCBI nr
Match: XP_022931154.1 (auxin-responsive protein IAA16-like isoform X1 [Cucurbita moschata]) HSP 1 Score: 268.1 bits (684), Expect = 6.8e-68 Identity = 148/227 (65.20%), Postives = 170/227 (74.89%), Query Frame = 0
BLAST of Sed0011970 vs. NCBI nr
Match: KAG6606400.1 (Auxin-responsive protein IAA16, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 267.7 bits (683), Expect = 8.8e-68 Identity = 148/228 (64.91%), Postives = 170/228 (74.56%), Query Frame = 0
BLAST of Sed0011970 vs. NCBI nr
Match: KAG7036340.1 (Auxin-responsive protein IAA16, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 265.0 bits (676), Expect = 5.7e-67 Identity = 148/235 (62.98%), Postives = 170/235 (72.34%), Query Frame = 0
BLAST of Sed0011970 vs. NCBI nr
Match: XP_022995772.1 (auxin-responsive protein IAA16-like isoform X1 [Cucurbita maxima]) HSP 1 Score: 264.6 bits (675), Expect = 7.5e-67 Identity = 148/224 (66.07%), Postives = 165/224 (73.66%), Query Frame = 0
BLAST of Sed0011970 vs. NCBI nr
Match: XP_022995774.1 (auxin-induced protein AUX28-like isoform X3 [Cucurbita maxima] >XP_022995775.1 auxin-induced protein AUX28-like isoform X3 [Cucurbita maxima]) HSP 1 Score: 264.6 bits (675), Expect = 7.5e-67 Identity = 148/224 (66.07%), Postives = 165/224 (73.66%), Query Frame = 0
BLAST of Sed0011970 vs. ExPASy Swiss-Prot
Match: P13089 (Auxin-induced protein AUX28 OS=Glycine max OX=3847 GN=AUX28 PE=2 SV=1) HSP 1 Score: 207.2 bits (526), Expect = 1.9e-52 Identity = 126/251 (50.20%), Postives = 153/251 (60.96%), Query Frame = 0
BLAST of Sed0011970 vs. ExPASy Swiss-Prot
Match: O24407 (Auxin-responsive protein IAA16 OS=Arabidopsis thaliana OX=3702 GN=IAA16 PE=1 SV=1) HSP 1 Score: 194.5 bits (493), Expect = 1.2e-48 Identity = 119/244 (48.77%), Postives = 155/244 (63.52%), Query Frame = 0
BLAST of Sed0011970 vs. ExPASy Swiss-Prot
Match: A2XLV9 (Auxin-responsive protein IAA13 OS=Oryza sativa subsp. indica OX=39946 GN=IAA13 PE=2 SV=1) HSP 1 Score: 189.1 bits (479), Expect = 5.2e-47 Identity = 116/234 (49.57%), Postives = 140/234 (59.83%), Query Frame = 0
BLAST of Sed0011970 vs. ExPASy Swiss-Prot
Match: Q10D34 (Auxin-responsive protein IAA13 OS=Oryza sativa subsp. japonica OX=39947 GN=IAA13 PE=2 SV=1) HSP 1 Score: 189.1 bits (479), Expect = 5.2e-47 Identity = 116/234 (49.57%), Postives = 140/234 (59.83%), Query Frame = 0
BLAST of Sed0011970 vs. ExPASy Swiss-Prot
Match: Q38832 (Auxin-responsive protein IAA14 OS=Arabidopsis thaliana OX=3702 GN=IAA14 PE=1 SV=2) HSP 1 Score: 186.8 bits (473), Expect = 2.6e-46 Identity = 116/238 (48.74%), Postives = 145/238 (60.92%), Query Frame = 0
BLAST of Sed0011970 vs. ExPASy TrEMBL
Match: A0A6J1ETJ1 (Auxin-responsive protein OS=Cucurbita moschata OX=3662 GN=LOC111437421 PE=3 SV=1) HSP 1 Score: 268.1 bits (684), Expect = 3.3e-68 Identity = 148/227 (65.20%), Postives = 170/227 (74.89%), Query Frame = 0
BLAST of Sed0011970 vs. ExPASy TrEMBL
Match: A0A6J1K6V6 (Auxin-responsive protein OS=Cucurbita maxima OX=3661 GN=LOC111491207 PE=3 SV=1) HSP 1 Score: 264.6 bits (675), Expect = 3.6e-67 Identity = 148/224 (66.07%), Postives = 165/224 (73.66%), Query Frame = 0
BLAST of Sed0011970 vs. ExPASy TrEMBL
Match: A0A6J1JZW8 (Auxin-responsive protein OS=Cucurbita maxima OX=3661 GN=LOC111491207 PE=3 SV=1) HSP 1 Score: 264.6 bits (675), Expect = 3.6e-67 Identity = 148/224 (66.07%), Postives = 165/224 (73.66%), Query Frame = 0
BLAST of Sed0011970 vs. ExPASy TrEMBL
Match: A0A6J1EYP0 (Auxin-responsive protein OS=Cucurbita moschata OX=3662 GN=LOC111437421 PE=3 SV=1) HSP 1 Score: 252.3 bits (643), Expect = 1.9e-63 Identity = 142/227 (62.56%), Postives = 164/227 (72.25%), Query Frame = 0
BLAST of Sed0011970 vs. ExPASy TrEMBL
Match: A0A6J1K8Z8 (Auxin-responsive protein OS=Cucurbita maxima OX=3661 GN=LOC111491207 PE=3 SV=1) HSP 1 Score: 248.8 bits (634), Expect = 2.1e-62 Identity = 142/224 (63.39%), Postives = 159/224 (70.98%), Query Frame = 0
BLAST of Sed0011970 vs. TAIR 10
Match: AT3G04730.1 (indoleacetic acid-induced protein 16 ) HSP 1 Score: 194.5 bits (493), Expect = 8.9e-50 Identity = 119/244 (48.77%), Postives = 155/244 (63.52%), Query Frame = 0
BLAST of Sed0011970 vs. TAIR 10
Match: AT4G14550.1 (indole-3-acetic acid inducible 14 ) HSP 1 Score: 186.8 bits (473), Expect = 1.8e-47 Identity = 116/238 (48.74%), Postives = 145/238 (60.92%), Query Frame = 0
BLAST of Sed0011970 vs. TAIR 10
Match: AT1G04250.1 (AUX/IAA transcriptional regulator family protein ) HSP 1 Score: 185.7 bits (470), Expect = 4.1e-47 Identity = 105/237 (44.30%), Postives = 145/237 (61.18%), Query Frame = 0
BLAST of Sed0011970 vs. TAIR 10
Match: AT3G23050.1 (indole-3-acetic acid 7 ) HSP 1 Score: 184.5 bits (467), Expect = 9.2e-47 Identity = 115/242 (47.52%), Postives = 146/242 (60.33%), Query Frame = 0
BLAST of Sed0011970 vs. TAIR 10
Match: AT5G65670.2 (indole-3-acetic acid inducible 9 ) HSP 1 Score: 162.2 bits (409), Expect = 4.9e-40 Identity = 89/201 (44.28%), Postives = 122/201 (60.70%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|