PI0024614.1 (mRNA) Melon (PI 482460) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGCACCACAAGGCAGACCATGAGTTCTGTGAGTTGGATGTATCCTGTCACATGGGATCCTTGGTGGGTGACACTTCAGGTTAGTTCCATGAGTTGGGGTGACACTTCAAGTGACTTCCATGAATTCGTACTAATATCTTTTTTTTCTTAGATGGTTGCTCTTCATCCACTCGTAGGATACGCGAGCACTTGCGGAACATTGAGTTGGAGAAATACGTAAACAAACATGAAAAAATTCCAATCTCCATCACACGAGAGGTGGAGAAGCCAATTTATCCACATGTTGTTCGGCTCAGTAACACTATTGGTGTGGCGGTCAAAGATTGTTTTCTGGTCCAATGTCATACGTATTCAGAGGCTCCACAGGAATTTATCGAGATGACTAAGGGCGATTGGTTGGTAAGTTTATGAGTTTTTAGTCTTTTACACTTAACCACACATATGGAAATTACCATAAACCATTTGTTCTTTACTTTTGTAGCGGTATTTCTTGCTTGATTTCTCAGATCCAACACTTAATAAATTTATCGAAGAAAAATGTCGACCTCGTTTAAAGAAGACAAAGCGGATTTGCACAAACATTTTAAGAAATGTGGTGACCCTAAGCGAGCACATGCCATATCGCCTACAAATTGAAGAACTGTTTAGAAGATTGGAATCTTTTGTGCAACTGTTTTCTAAGTGAAGGATTTCAGGTGATTTACTTCCTTTAATACATCACTTTTTTATAAGCAATTTACTTAATGTGTTATTTTTGTTGTTTGAATGTATGAGCAATCAAAGACTAACAAGTAGAATAGAGAAACAACCATTCCATCATAGTAGCAGGTCGAAGTCGTTTCTGCAGAGACAATCTGAGCTTAGTGAACAACAAGGTGAATCAGTGGAACATGTGGACCTATTCAAAGAAACGCACTCCAATAAGAGTGGTGAATCAGGCAGCTAAGGATGCACATGTAAGTAATGTGGTTTATTTTCTAGTTGTTTTGAGTGCACAACTTAACTATTTGTTTGCAGAACCAAATGGTAGAGTTACTATCAACACCCACTCCATAAGGTTCTCAATCACTATCAGGAGATGAAATATGCGAGACAGTTTTAGGTACATGACCTGGTTACTCAAAAGGTCTTGGTTGAGGCCCCCCAATAAATGCACGATAGGGAGGTGAGGGAACTAAGAGCCAACTTTGAGATGTCACAATGAAAGATTAAAGAACTTGAAGAAGGCCAAAGACGTATGGTAGAGGAACAATGCTAGAGAAATAGAAGAACAAAGAAAAATGTCAGAGATGCATGCCAGACAAATGGAATAAATGAAAAAAAATTATTGAAGAAATGACACGAGCACAAAGAGGACCATAAACTTTAGGTATGTATTCTTCAAATTACTAATTGCCCAATACTTTACTAAATAGTTATTGTAGCTTTATTTCAAAATATTAGCATTCTAAGGATTGGTTCTGGCTATCCTGCAGTTATGGTAGCTTTTTAGTTGGGTGAATGATTCTGCTTAATATGTTGTTGTTCTTGATATGTTGATGTTGTGGGGTGGTTTCTCTTTTCTTGAATTGTTGTTGTTCTTTAGGGGGATCATGAATTTTCTTAACATTGTTGTCTTGAGGATGGGCAAACTTTGCTTAATTGCTAGGATGTGTTGAGAGGTGGGTTTGTGAGTTTCTTGAGTTCTCTTGGATTGATTTGTTGTTGTTGTTTCAGGTGAGTGAACTTTTTGTTTAA ATGCACCACAAGGCAGACCATGAGTTCTGTGAGTTGGATGTATCCTGTCACATGGGATCCTTGGTGGGTGACACTTCAGATGGTTGCTCTTCATCCACTCGTAGGATACGCGAGCACTTGCGGAACATTGAGTTGGAGAAATACGTAAACAAACATGAAAAAATTCCAATCTCCATCACACGAGAGGTGGAGAAGCCAATTTATCCACATGTTGTTCGGCTCAGTAACACTATTGGTGTGGCGGTCAAAGATTGTTTTCTGGTCCAATGTCATACGTATTCAGAGGCTCCACAGGAATTTATCGAGATGACTAAGGGCGATTGGTTGCGGTATTTCTTGCTTGATTTCTCAGATCCAACACTTAATAAATTTATCGAAGAAAAATGTCGACCTCGTTTAAAGAAGACAAAGCGGATTTGCACAAACATTTTAAGAAATGTGGTGACCCTAAGCGAGCACATGCCATATCGCCTACAAATTGAAGAACTGTTTAGAAGATTGGAATCTTTTGTGCAACTGTTTTCTAAAGACAATCTGAGCTTAGTGAACAACAAGGTGAATCAGTGGAACATGTGGACCTATTCAAAGAAACGCACTCCAATAAGAGTGGTGAATCAGGCAGCTAAGGATGCACATGTGAGTGAACTTTTTGTTTAA ATGCACCACAAGGCAGACCATGAGTTCTGTGAGTTGGATGTATCCTGTCACATGGGATCCTTGGTGGGTGACACTTCAGATGGTTGCTCTTCATCCACTCGTAGGATACGCGAGCACTTGCGGAACATTGAGTTGGAGAAATACGTAAACAAACATGAAAAAATTCCAATCTCCATCACACGAGAGGTGGAGAAGCCAATTTATCCACATGTTGTTCGGCTCAGTAACACTATTGGTGTGGCGGTCAAAGATTGTTTTCTGGTCCAATGTCATACGTATTCAGAGGCTCCACAGGAATTTATCGAGATGACTAAGGGCGATTGGTTGCGGTATTTCTTGCTTGATTTCTCAGATCCAACACTTAATAAATTTATCGAAGAAAAATGTCGACCTCGTTTAAAGAAGACAAAGCGGATTTGCACAAACATTTTAAGAAATGTGGTGACCCTAAGCGAGCACATGCCATATCGCCTACAAATTGAAGAACTGTTTAGAAGATTGGAATCTTTTGTGCAACTGTTTTCTAAAGACAATCTGAGCTTAGTGAACAACAAGGTGAATCAGTGGAACATGTGGACCTATTCAAAGAAACGCACTCCAATAAGAGTGGTGAATCAGGCAGCTAAGGATGCACATGTGAGTGAACTTTTTGTTTAA MHHKADHEFCELDVSCHMGSLVGDTSDGCSSSTRRIREHLRNIELEKYVNKHEKIPISITREVEKPIYPHVVRLSNTIGVAVKDCFLVQCHTYSEAPQEFIEMTKGDWLRYFLLDFSDPTLNKFIEEKCRPRLKKTKRICTNILRNVVTLSEHMPYRLQIEELFRRLESFVQLFSKDNLSLVNNKVNQWNMWTYSKKRTPIRVVNQAAKDAHVSELFV Homology
BLAST of PI0024614.1 vs. ExPASy TrEMBL
Match: A0A5D3CAD2 (CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold648G001000 PE=4 SV=1) HSP 1 Score: 104.4 bits (259), Expect = 6.2e-19 Identity = 52/101 (51.49%), Postives = 69/101 (68.32%), Query Frame = 0
BLAST of PI0024614.1 vs. ExPASy TrEMBL
Match: A0A5D3BVT3 ((R)-mandelonitrile lyase 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold2454G00010 PE=4 SV=1) HSP 1 Score: 102.1 bits (253), Expect = 3.1e-18 Identity = 52/103 (50.49%), Postives = 73/103 (70.87%), Query Frame = 0
BLAST of PI0024614.1 vs. ExPASy TrEMBL
Match: A0A5A7TSX8 (CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold284G00490 PE=4 SV=1) HSP 1 Score: 100.1 bits (248), Expect = 1.2e-17 Identity = 57/149 (38.26%), Postives = 86/149 (57.72%), Query Frame = 0
BLAST of PI0024614.1 vs. ExPASy TrEMBL
Match: A0A5A7VLN4 (CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1185G00560 PE=4 SV=1) HSP 1 Score: 97.4 bits (241), Expect = 7.6e-17 Identity = 54/150 (36.00%), Postives = 84/150 (56.00%), Query Frame = 0
BLAST of PI0024614.1 vs. ExPASy TrEMBL
Match: A0A5D3DD82 (CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1734G00120 PE=4 SV=1) HSP 1 Score: 97.1 bits (240), Expect = 1.0e-16 Identity = 53/134 (39.55%), Postives = 79/134 (58.96%), Query Frame = 0
BLAST of PI0024614.1 vs. NCBI nr
Match: XP_038902987.1 (uncharacterized protein LOC120089695 [Benincasa hispida]) HSP 1 Score: 118.2 bits (295), Expect = 8.6e-23 Identity = 67/132 (50.76%), Postives = 83/132 (62.88%), Query Frame = 0
BLAST of PI0024614.1 vs. NCBI nr
Match: KAA0047652.1 (CACTA en-spm transposon protein [Cucumis melo var. makuwa] >TYK08310.1 CACTA en-spm transposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 104.4 bits (259), Expect = 1.3e-18 Identity = 52/101 (51.49%), Postives = 69/101 (68.32%), Query Frame = 0
BLAST of PI0024614.1 vs. NCBI nr
Match: KAA0038006.1 ((R)-mandelonitrile lyase 1-like [Cucumis melo var. makuwa] >TYK02199.1 (R)-mandelonitrile lyase 1-like [Cucumis melo var. makuwa]) HSP 1 Score: 102.1 bits (253), Expect = 6.4e-18 Identity = 52/103 (50.49%), Postives = 73/103 (70.87%), Query Frame = 0
BLAST of PI0024614.1 vs. NCBI nr
Match: KAA0046250.1 (CACTA en-spm transposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 100.1 bits (248), Expect = 2.4e-17 Identity = 57/149 (38.26%), Postives = 86/149 (57.72%), Query Frame = 0
BLAST of PI0024614.1 vs. NCBI nr
Match: KAA0068110.1 (CACTA en-spm transposon protein [Cucumis melo var. makuwa] >TYK26093.1 CACTA en-spm transposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 97.4 bits (241), Expect = 1.6e-16 Identity = 54/150 (36.00%), Postives = 84/150 (56.00%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
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