PI0024614 (gene) Melon (PI 482460) v1

Overview
NamePI0024614
Typegene
OrganismCucumis metuliferus (Melon (PI 482460) v1)
DescriptionCACTA en-spm transposon protein
Locationchr05: 6822090 .. 6823826 (-)
RNA-Seq ExpressionPI0024614
SyntenyPI0024614
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCACCACAAGGCAGACCATGAGTTCTGTGAGTTGGATGTATCCTGTCACATGGGATCCTTGGTGGGTGACACTTCAGGTTAGTTCCATGAGTTGGGGTGACACTTCAAGTGACTTCCATGAATTCGTACTAATATCTTTTTTTTCTTAGATGGTTGCTCTTCATCCACTCGTAGGATACGCGAGCACTTGCGGAACATTGAGTTGGAGAAATACGTAAACAAACATGAAAAAATTCCAATCTCCATCACACGAGAGGTGGAGAAGCCAATTTATCCACATGTTGTTCGGCTCAGTAACACTATTGGTGTGGCGGTCAAAGATTGTTTTCTGGTCCAATGTCATACGTATTCAGAGGCTCCACAGGAATTTATCGAGATGACTAAGGGCGATTGGTTGGTAAGTTTATGAGTTTTTAGTCTTTTACACTTAACCACACATATGGAAATTACCATAAACCATTTGTTCTTTACTTTTGTAGCGGTATTTCTTGCTTGATTTCTCAGATCCAACACTTAATAAATTTATCGAAGAAAAATGTCGACCTCGTTTAAAGAAGACAAAGCGGATTTGCACAAACATTTTAAGAAATGTGGTGACCCTAAGCGAGCACATGCCATATCGCCTACAAATTGAAGAACTGTTTAGAAGATTGGAATCTTTTGTGCAACTGTTTTCTAAGTGAAGGATTTCAGGTGATTTACTTCCTTTAATACATCACTTTTTTATAAGCAATTTACTTAATGTGTTATTTTTGTTGTTTGAATGTATGAGCAATCAAAGACTAACAAGTAGAATAGAGAAACAACCATTCCATCATAGTAGCAGGTCGAAGTCGTTTCTGCAGAGACAATCTGAGCTTAGTGAACAACAAGGTGAATCAGTGGAACATGTGGACCTATTCAAAGAAACGCACTCCAATAAGAGTGGTGAATCAGGCAGCTAAGGATGCACATGTAAGTAATGTGGTTTATTTTCTAGTTGTTTTGAGTGCACAACTTAACTATTTGTTTGCAGAACCAAATGGTAGAGTTACTATCAACACCCACTCCATAAGGTTCTCAATCACTATCAGGAGATGAAATATGCGAGACAGTTTTAGGTACATGACCTGGTTACTCAAAAGGTCTTGGTTGAGGCCCCCCAATAAATGCACGATAGGGAGGTGAGGGAACTAAGAGCCAACTTTGAGATGTCACAATGAAAGATTAAAGAACTTGAAGAAGGCCAAAGACGTATGGTAGAGGAACAATGCTAGAGAAATAGAAGAACAAAGAAAAATGTCAGAGATGCATGCCAGACAAATGGAATAAATGAAAAAAAATTATTGAAGAAATGACACGAGCACAAAGAGGACCATAAACTTTAGGTATGTATTCTTCAAATTACTAATTGCCCAATACTTTACTAAATAGTTATTGTAGCTTTATTTCAAAATATTAGCATTCTAAGGATTGGTTCTGGCTATCCTGCAGTTATGGTAGCTTTTTAGTTGGGTGAATGATTCTGCTTAATATGTTGTTGTTCTTGATATGTTGATGTTGTGGGGTGGTTTCTCTTTTCTTGAATTGTTGTTGTTCTTTAGGGGGATCATGAATTTTCTTAACATTGTTGTCTTGAGGATGGGCAAACTTTGCTTAATTGCTAGGATGTGTTGAGAGGTGGGTTTGTGAGTTTCTTGAGTTCTCTTGGATTGATTTGTTGTTGTTGTTTCAGGTGAGTGAACTTTTTGTTTAA

mRNA sequence

ATGCACCACAAGGCAGACCATGAGTTCTGTGAGTTGGATGTATCCTGTCACATGGGATCCTTGGTGGGTGACACTTCAGATGGTTGCTCTTCATCCACTCGTAGGATACGCGAGCACTTGCGGAACATTGAGTTGGAGAAATACGTAAACAAACATGAAAAAATTCCAATCTCCATCACACGAGAGGTGGAGAAGCCAATTTATCCACATGTTGTTCGGCTCAGTAACACTATTGGTGTGGCGGTCAAAGATTGTTTTCTGGTCCAATGTCATACGTATTCAGAGGCTCCACAGGAATTTATCGAGATGACTAAGGGCGATTGGTTGCGGTATTTCTTGCTTGATTTCTCAGATCCAACACTTAATAAATTTATCGAAGAAAAATGTCGACCTCGTTTAAAGAAGACAAAGCGGATTTGCACAAACATTTTAAGAAATGTGGTGACCCTAAGCGAGCACATGCCATATCGCCTACAAATTGAAGAACTGTTTAGAAGATTGGAATCTTTTGTGCAACTGTTTTCTAAAGACAATCTGAGCTTAGTGAACAACAAGGTGAATCAGTGGAACATGTGGACCTATTCAAAGAAACGCACTCCAATAAGAGTGGTGAATCAGGCAGCTAAGGATGCACATGTGAGTGAACTTTTTGTTTAA

Coding sequence (CDS)

ATGCACCACAAGGCAGACCATGAGTTCTGTGAGTTGGATGTATCCTGTCACATGGGATCCTTGGTGGGTGACACTTCAGATGGTTGCTCTTCATCCACTCGTAGGATACGCGAGCACTTGCGGAACATTGAGTTGGAGAAATACGTAAACAAACATGAAAAAATTCCAATCTCCATCACACGAGAGGTGGAGAAGCCAATTTATCCACATGTTGTTCGGCTCAGTAACACTATTGGTGTGGCGGTCAAAGATTGTTTTCTGGTCCAATGTCATACGTATTCAGAGGCTCCACAGGAATTTATCGAGATGACTAAGGGCGATTGGTTGCGGTATTTCTTGCTTGATTTCTCAGATCCAACACTTAATAAATTTATCGAAGAAAAATGTCGACCTCGTTTAAAGAAGACAAAGCGGATTTGCACAAACATTTTAAGAAATGTGGTGACCCTAAGCGAGCACATGCCATATCGCCTACAAATTGAAGAACTGTTTAGAAGATTGGAATCTTTTGTGCAACTGTTTTCTAAAGACAATCTGAGCTTAGTGAACAACAAGGTGAATCAGTGGAACATGTGGACCTATTCAAAGAAACGCACTCCAATAAGAGTGGTGAATCAGGCAGCTAAGGATGCACATGTGAGTGAACTTTTTGTTTAA

Protein sequence

MHHKADHEFCELDVSCHMGSLVGDTSDGCSSSTRRIREHLRNIELEKYVNKHEKIPISITREVEKPIYPHVVRLSNTIGVAVKDCFLVQCHTYSEAPQEFIEMTKGDWLRYFLLDFSDPTLNKFIEEKCRPRLKKTKRICTNILRNVVTLSEHMPYRLQIEELFRRLESFVQLFSKDNLSLVNNKVNQWNMWTYSKKRTPIRVVNQAAKDAHVSELFV
Homology
BLAST of PI0024614 vs. ExPASy TrEMBL
Match: A0A5D3CAD2 (CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold648G001000 PE=4 SV=1)

HSP 1 Score: 104.4 bits (259), Expect = 6.2e-19
Identity = 52/101 (51.49%), Postives = 69/101 (68.32%), Query Frame = 0

Query: 37  REHLRNIELEKYVNKHEKIPISITREVEKPIYPHVVRLSNTIGVAVKDCFLVQCHTYSEA 96
           RE+ +N+ELEKYV KH KIPISIT+  EK   PHVV  SN IGV ++D FLV C  ++  
Sbjct: 114 REYSQNMELEKYVYKHGKIPISITQGAEKLNSPHVVHFSNIIGVTMRDKFLVCCLKFANV 173

Query: 97  PQEFIEMTKGDWLRYFLLDFSDPTLNKFIEEKCRPRLKKTK 138
           P E+IE+ KG   RYF+LDF++  LN+F+E +     K+ K
Sbjct: 174 PPEYIEIVKGTLQRYFVLDFTNHALNRFVEHQMLTSFKEYK 214

BLAST of PI0024614 vs. ExPASy TrEMBL
Match: A0A5D3BVT3 ((R)-mandelonitrile lyase 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold2454G00010 PE=4 SV=1)

HSP 1 Score: 102.1 bits (253), Expect = 3.1e-18
Identity = 52/103 (50.49%), Postives = 73/103 (70.87%), Query Frame = 0

Query: 3   HKADHEFCELDVSCHMGSLVGDTSDGCSSSTRRIREHLRNIELEKYVNKHEKIPISITRE 62
           +++ + F EL++S H GSLVGDTS+G S  TR+ R+H RN+ELEKY+ KH KIPISIT  
Sbjct: 31  YESKNLFQELNISPHTGSLVGDTSNG-SGPTRKTRDHSRNMELEKYICKHGKIPISITLG 90

Query: 63  VEKPIYPHVVRLSNTIGVAVKDCFLVQCHTYSEAPQEFIEMTK 106
            EK I  HVV  SNTI VA++D F +    +++ P ++I++ K
Sbjct: 91  AEKSISSHVVLFSNTISVAIRDAFPIWLLRFADVPSKYIKIVK 132

BLAST of PI0024614 vs. ExPASy TrEMBL
Match: A0A5A7TSX8 (CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold284G00490 PE=4 SV=1)

HSP 1 Score: 100.1 bits (248), Expect = 1.2e-17
Identity = 57/149 (38.26%), Postives = 86/149 (57.72%), Query Frame = 0

Query: 11  ELDVSCHMGSLVGDTSDGCSSS----TRRIREHLRNIELEKYVNKHEKIPISITREVEKP 70
           +LD      S VGD + G SS     T R R   R +ELE++V  + +IP++I    EKP
Sbjct: 13  DLDNIAGGSSSVGDNTAGSSSQQTTPTPRRRAQSRLLELERHVAINGRIPMTIAPGAEKP 72

Query: 71  IYPHVVRLSNTIGVAVKDCFLVQCHTYSEAPQEFIEMTKGDWLRYFLLDFSDPTLNKFIE 130
           I PH VR S TIGV V+  FLV+C  +++  +E+IE+ KGD  R F+LDF+D  +N+F+E
Sbjct: 73  ISPHAVRFSQTIGVCVQKTFLVRCLKWTDVGREYIEVVKGDLQRLFVLDFNDQAMNRFVE 132

Query: 131 EKCRPRLKKTKRICTNILRNVVTLSEHMP 156
            +     K+ +    +I ++  T    +P
Sbjct: 133 HQMLTTFKEFRADFIDISKSTATQRRLVP 161

BLAST of PI0024614 vs. ExPASy TrEMBL
Match: A0A5A7VLN4 (CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1185G00560 PE=4 SV=1)

HSP 1 Score: 97.4 bits (241), Expect = 7.6e-17
Identity = 54/150 (36.00%), Postives = 84/150 (56.00%), Query Frame = 0

Query: 11  ELDVSCHMGSLVGDTSDGCSSS-----TRRIREHLRNIELEKYVNKHEKIPISITREVEK 70
           +LD      S +GD S G SS      T R R   + +ELE+Y   + +IP+ I    +K
Sbjct: 81  DLDNLAGGSSSMGDNSAGSSSQPFATLTPRRRVQSQILELERYNAANGQIPMMIAPGAKK 140

Query: 71  PIYPHVVRLSNTIGVAVKDCFLVQCHTYSEAPQEFIEMTKGDWLRYFLLDFSDPTLNKFI 130
           PI+PHVVR S  I + ++  F V C  + +  +E+IE+ KGD  R+F+LDF+D  +N+F+
Sbjct: 141 PIFPHVVRFSQVISMCMRRTFPVCCLKWVDVDREYIEVVKGDLQRFFVLDFNDQAMNRFV 200

Query: 131 EEKCRPRLKKTKRICTNILRNVVTLSEHMP 156
           E +C P LK       + L++  T  + +P
Sbjct: 201 EHRCSPPLKSLGATVIDTLKSTATPRKLVP 230

BLAST of PI0024614 vs. ExPASy TrEMBL
Match: A0A5D3DD82 (CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1734G00120 PE=4 SV=1)

HSP 1 Score: 97.1 bits (240), Expect = 1.0e-16
Identity = 53/134 (39.55%), Postives = 79/134 (58.96%), Query Frame = 0

Query: 11  ELDVSCHMGSLVGDTSDGCSSS----TRRIREHLRNIELEKYVNKHEKIPISITREVEKP 70
           +LD      S VGD + G SS     T R R   R +ELE++V  + +IP++I    EKP
Sbjct: 13  DLDNIAGGSSSVGDNTAGSSSQQTTPTPRRRAQSRLLELERHVAINGRIPMTIAPGAEKP 72

Query: 71  IYPHVVRLSNTIGVAVKDCFLVQCHTYSEAPQEFIEMTKGDWLRYFLLDFSDPTLNKFIE 130
           I PH VR S  IGV V+  F V+C  +++  +E+IE+ KGD  R+F+LDF+D  +N+F+E
Sbjct: 73  ISPHAVRFSQAIGVCVRKTFPVRCLKWTDVGREYIEVVKGDLQRFFVLDFNDQAMNRFVE 132

Query: 131 EKCRPRLKKTKRIC 141
            +     K+ +  C
Sbjct: 133 HQMLTTFKEFRADC 146

BLAST of PI0024614 vs. NCBI nr
Match: XP_038902987.1 (uncharacterized protein LOC120089695 [Benincasa hispida])

HSP 1 Score: 118.2 bits (295), Expect = 8.6e-23
Identity = 67/132 (50.76%), Postives = 83/132 (62.88%), Query Frame = 0

Query: 4   KADHEFCELDVSCHMGSLVGDTSDGCSSSTRRIREHLRNIELEKYVNKHEKIPISITREV 63
           +AD EF EL ++  + S VGDTSD  S+S R+ REH RNI+LEKYV KH  I I I    
Sbjct: 9   EADEEFQELYLNNKVSS-VGDTSDSSSTSNRKKREHSRNIKLEKYVQKHGIIIIVINEGE 68

Query: 64  EKPIYPHVVRLSNTIGVAVKDCFLVQCHTYSEAPQEFIEMTKGDWLRYFLLDFSDPTLNK 123
            KPI  H VR SN IGVAV+  F V C T++E P EFIE+ K   L +F LD S   LN+
Sbjct: 69  TKPISKHSVRFSNAIGVAVRFAFPVHCRTFTEVPNEFIELAKIQLLAHFKLDLSSQRLNR 128

Query: 124 FIEEKCRPRLKK 136
           FIE + +   K+
Sbjct: 129 FIEHQMQNSFKE 139

BLAST of PI0024614 vs. NCBI nr
Match: KAA0047652.1 (CACTA en-spm transposon protein [Cucumis melo var. makuwa] >TYK08310.1 CACTA en-spm transposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 104.4 bits (259), Expect = 1.3e-18
Identity = 52/101 (51.49%), Postives = 69/101 (68.32%), Query Frame = 0

Query: 37  REHLRNIELEKYVNKHEKIPISITREVEKPIYPHVVRLSNTIGVAVKDCFLVQCHTYSEA 96
           RE+ +N+ELEKYV KH KIPISIT+  EK   PHVV  SN IGV ++D FLV C  ++  
Sbjct: 114 REYSQNMELEKYVYKHGKIPISITQGAEKLNSPHVVHFSNIIGVTMRDKFLVCCLKFANV 173

Query: 97  PQEFIEMTKGDWLRYFLLDFSDPTLNKFIEEKCRPRLKKTK 138
           P E+IE+ KG   RYF+LDF++  LN+F+E +     K+ K
Sbjct: 174 PPEYIEIVKGTLQRYFVLDFTNHALNRFVEHQMLTSFKEYK 214

BLAST of PI0024614 vs. NCBI nr
Match: KAA0038006.1 ((R)-mandelonitrile lyase 1-like [Cucumis melo var. makuwa] >TYK02199.1 (R)-mandelonitrile lyase 1-like [Cucumis melo var. makuwa])

HSP 1 Score: 102.1 bits (253), Expect = 6.4e-18
Identity = 52/103 (50.49%), Postives = 73/103 (70.87%), Query Frame = 0

Query: 3   HKADHEFCELDVSCHMGSLVGDTSDGCSSSTRRIREHLRNIELEKYVNKHEKIPISITRE 62
           +++ + F EL++S H GSLVGDTS+G S  TR+ R+H RN+ELEKY+ KH KIPISIT  
Sbjct: 31  YESKNLFQELNISPHTGSLVGDTSNG-SGPTRKTRDHSRNMELEKYICKHGKIPISITLG 90

Query: 63  VEKPIYPHVVRLSNTIGVAVKDCFLVQCHTYSEAPQEFIEMTK 106
            EK I  HVV  SNTI VA++D F +    +++ P ++I++ K
Sbjct: 91  AEKSISSHVVLFSNTISVAIRDAFPIWLLRFADVPSKYIKIVK 132

BLAST of PI0024614 vs. NCBI nr
Match: KAA0046250.1 (CACTA en-spm transposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 100.1 bits (248), Expect = 2.4e-17
Identity = 57/149 (38.26%), Postives = 86/149 (57.72%), Query Frame = 0

Query: 11  ELDVSCHMGSLVGDTSDGCSSS----TRRIREHLRNIELEKYVNKHEKIPISITREVEKP 70
           +LD      S VGD + G SS     T R R   R +ELE++V  + +IP++I    EKP
Sbjct: 13  DLDNIAGGSSSVGDNTAGSSSQQTTPTPRRRAQSRLLELERHVAINGRIPMTIAPGAEKP 72

Query: 71  IYPHVVRLSNTIGVAVKDCFLVQCHTYSEAPQEFIEMTKGDWLRYFLLDFSDPTLNKFIE 130
           I PH VR S TIGV V+  FLV+C  +++  +E+IE+ KGD  R F+LDF+D  +N+F+E
Sbjct: 73  ISPHAVRFSQTIGVCVQKTFLVRCLKWTDVGREYIEVVKGDLQRLFVLDFNDQAMNRFVE 132

Query: 131 EKCRPRLKKTKRICTNILRNVVTLSEHMP 156
            +     K+ +    +I ++  T    +P
Sbjct: 133 HQMLTTFKEFRADFIDISKSTATQRRLVP 161

BLAST of PI0024614 vs. NCBI nr
Match: KAA0068110.1 (CACTA en-spm transposon protein [Cucumis melo var. makuwa] >TYK26093.1 CACTA en-spm transposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 97.4 bits (241), Expect = 1.6e-16
Identity = 54/150 (36.00%), Postives = 84/150 (56.00%), Query Frame = 0

Query: 11  ELDVSCHMGSLVGDTSDGCSSS-----TRRIREHLRNIELEKYVNKHEKIPISITREVEK 70
           +LD      S +GD S G SS      T R R   + +ELE+Y   + +IP+ I    +K
Sbjct: 81  DLDNLAGGSSSMGDNSAGSSSQPFATLTPRRRVQSQILELERYNAANGQIPMMIAPGAKK 140

Query: 71  PIYPHVVRLSNTIGVAVKDCFLVQCHTYSEAPQEFIEMTKGDWLRYFLLDFSDPTLNKFI 130
           PI+PHVVR S  I + ++  F V C  + +  +E+IE+ KGD  R+F+LDF+D  +N+F+
Sbjct: 141 PIFPHVVRFSQVISMCMRRTFPVCCLKWVDVDREYIEVVKGDLQRFFVLDFNDQAMNRFV 200

Query: 131 EEKCRPRLKKTKRICTNILRNVVTLSEHMP 156
           E +C P LK       + L++  T  + +P
Sbjct: 201 EHRCSPPLKSLGATVIDTLKSTATPRKLVP 230

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5D3CAD26.2e-1951.49CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_... [more]
A0A5D3BVT33.1e-1850.49(R)-mandelonitrile lyase 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_... [more]
A0A5A7TSX81.2e-1738.26CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_... [more]
A0A5A7VLN47.6e-1736.00CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_... [more]
A0A5D3DD821.0e-1639.55CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_... [more]
Match NameE-valueIdentityDescription
XP_038902987.18.6e-2350.76uncharacterized protein LOC120089695 [Benincasa hispida][more]
KAA0047652.11.3e-1851.49CACTA en-spm transposon protein [Cucumis melo var. makuwa] >TYK08310.1 CACTA en-... [more]
KAA0038006.16.4e-1850.49(R)-mandelonitrile lyase 1-like [Cucumis melo var. makuwa] >TYK02199.1 (R)-mande... [more]
KAA0046250.12.4e-1738.26CACTA en-spm transposon protein [Cucumis melo var. makuwa][more]
KAA0068110.11.6e-1636.00CACTA en-spm transposon protein [Cucumis melo var. makuwa] >TYK26093.1 CACTA en-... [more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
PI0024614.1PI0024614.1mRNA