PI0017593.1 (mRNA) Melon (PI 482460) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCGTTCTCTTCAATTACCATGAAATGCCCCCCCGTCCTTCACTTGCGAGCCCTTCCTAAAAGTTCTGCACCTCAAAATTCAATTTCCTTCCATTTTTCTCCTACGAAATTCAGCCGGAGAAAATCCTTATCGATTCGATCGGTTTCAGTCCCAGGTACGCTAATTTTTAATTTTCCCATCCGTTTTCCTCCTTGTTTTCCCGATATTATACTTGGCTATATCACCTTAGTTCATCGTTGTACTATTTGGAAGGAAATTAATCAGGGTTTTTTTCCCCTTTTGGATTGGATTGAAATTATGAATTTGTGGAGAACGTCTGGATTCGCGTTATTTTTTTAAATCAATCAAAACGCAGGATTCATTTATTGGTTGCTCGTAATCGAAATTGATAGCTGGTGGAAGTCTTTCGTTGAAATTAAGTAACAGAATTTTGGGACTTTAATGTTGATTTTCATGGAAAATAAATTTCCCCTCTACTTGTACTGATGACTTGTTTATGAGTTATAATTCAAGATCCAGTTGGTGATATTCAAACCATGAATTTACGTCTTTGTTTTGTTCTAATGCCTAAATCATTAGGATGGATTGGTCTTCATGTGGAGGCAAAGGTGTTCATTTTTTCTTGTGTTTGATACCTTCGATTGGTTATTTGTTTTAGAGCCTGTTTGGGAGTGGTTTTGAAATGGTTAATCACTTTCTTTCTTGTTCAAAACCACTCCGAATTTGTCTTTAATCATAAAAAAACGATTTAATGTTTGATAATTTCACTTTTAAATGCAATTTCCATATCTTTAAATTTAATTTTGAAGGATTAAAAGCATATTTCAAGTCATTTTGGACAATAAAAACTGATTTTAACCCTTTCAAAATAACTCCGAACATGCACTTAAACATCTTCTGGTGCAAATTATTTTTTGTTTTCTCTATGGCACTTTCCCTTTGCGTGTTACTGCAGATCAAAAGATAAAACCTACTGAATCTTGTCCTACAGTTTTTGCATATGAAACACGATGAGTATATCATGCATTTATGATCAAAGTTTGCCTAGTCATCTTATGTTTTTTGTGATTAAACAGCTGCGCCAGCATCCGAGGGTATAGCACTGCTATCTCATTAACCGATAATGCATTGAAACACTTGAATAAAATGAGATCTGAACGTAATGAAGATTTGTGCTTAAGAATTGGTGTCAGACAGGGTGGATGCTCTGGTATGTCCTACACCATGGAGTTTGAGAACAGGGCAAATGCTAGACCTGATGATTCGATTATAGAATATAATGGTTTTCAGATAGGTAAGAGTTATGGCTTTGCTTTTTTTCACCTTGAATTTCTAGTGAGATTTTACTAGTGATAGTGCAACTGTTTGAAGAAATCCTTTTTTTAATGCATTTTATTGGTAGATAATCCATTGCTTTATATACATACTTTTTTTTGGGGGGCGGGGGGTACTGGAATGTCTAAGTCTTGTTTTGCGCATGTTTTGGATTGATACTGTGGAATGGTTAAGGGCAAGTTTTCAAATTTCCTTAGGATGAAAGAGGCTTACTCTTTTATAGTTTTATACATTCAGATAGTGATGGGTATTTCATGAGCCATATGCCATAAATTTGAAGGACTCTACAAGAATAATTTTTCTCTATAGTTCATAATCTATCTCTTAGCTCCAAAAGAAAATGGTGATATACATAAGTCTAGGTTTGGATATTATTTTTTTTTATGAATCAAACTGCTTTCATTGAGAAAAAATGAAAGAATACAAGGTTTGTACAAAAAAAAACCAGCCCACCAAAACACCCCAATTGACAGAAGGGGGAACCAACTAAGTAAAATGTTACCAATAGAGTAATTACAAAAGTGCTTTGATATCGAAGCCCAAAGGGAAACATGAAATCTAATCAAAGACTAAATCTCACTGTGCTCCCTCTCCCTACCTCTAAAGACCCGGTTGTTCCTCTCACCCCAAATGCCCCAATCAATAGCACACACCCCAGCCAACCATAATAATCCCCCTTAACGACAGTCCCAGAAAAGAAGTCTAGGTTTGCATATTGTTAGATTGATACTTTCTTTCCCGTGGATCGGTAGAGGGCAAGTTTTCAATTTTTATTAGGATAAAAGAAGCTTACATATCATGAGCCACGTGCCATAAGTTTGCTGGACTCTACAAGAAGTTTTACTCTATAGCTCATAATCTATCACTTCTCTTCGACACTCAATGACTTGAATTATTAGATATGAGCAATTTTTTATGCTAACTGGTAAGTAGGTTGCGCTACAACTTTTGTCAAATATATTTTTCTTTAATGCATACTATTCAACATAAAGTTGTATATTGTTTCAATTCCTTGATTCCCAAAGTGAGCATAGTTCAACTGAGTTAGTGATAAAAAAGTTTGTGATTCAAAACAATGAGTCCTCCCACCCTTGTTGTTACTAATGAAAAGAGAGTCCTTGATAATTGCTCTCTACTCTATTGATAAAGGAAAGTAAGCATCTTTTAGTGAACTATGAAAGTATCTTTGTATCTACTTCATTTTCATTTCCTCTATGCCCTTTTAAGTTGTACCCTCGAACACAAATTTAAGTTCACTTTTAGTCTGAACTTCTGATACAAATTTCCCTCTCTTCTTGTTTTGTAGTATGTGATCCCAAGAGCCTACTTTTCTTGTTTGGAATGCAATTGGACTACAGCGACGCACTTATTGGTGGGGGCTTTTCTTTCAAGAACCCAAATGCTACACAAACCTGTGGTTGTGGAAAATCGTTTAATGCAGAAATGTAG ATGGCGTTCTCTTCAATTACCATGAAATGCCCCCCCGTCCTTCACTTGCGAGCCCTTCCTAAAAGTTCTGCACCTCAAAATTCAATTTCCTTCCATTTTTCTCCTACGAAATTCAGCCGGAGAAAATCCTTATCGATTCGATCGGTTTCAGTCCCAGGGTATAGCACTGCTATCTCATTAACCGATAATGCATTGAAACACTTGAATAAAATGAGATCTGAACGTAATGAAGATTTGTGCTTAAGAATTGGTGTCAGACAGGGTGGATGCTCTGGTATGTCCTACACCATGGAGTTTGAGAACAGGGCAAATGCTAGACCTGATGATTCGATTATAGAATATAATGGTTTTCAGATAGTATGTGATCCCAAGAGCCTACTTTTCTTGTTTGGAATGCAATTGGACTACAGCGACGCACTTATTGGTGGGGGCTTTTCTTTCAAGAACCCAAATGCTACACAAACCTGTGGTTGTGGAAAATCGTTTAATGCAGAAATGTAG ATGGCGTTCTCTTCAATTACCATGAAATGCCCCCCCGTCCTTCACTTGCGAGCCCTTCCTAAAAGTTCTGCACCTCAAAATTCAATTTCCTTCCATTTTTCTCCTACGAAATTCAGCCGGAGAAAATCCTTATCGATTCGATCGGTTTCAGTCCCAGGGTATAGCACTGCTATCTCATTAACCGATAATGCATTGAAACACTTGAATAAAATGAGATCTGAACGTAATGAAGATTTGTGCTTAAGAATTGGTGTCAGACAGGGTGGATGCTCTGGTATGTCCTACACCATGGAGTTTGAGAACAGGGCAAATGCTAGACCTGATGATTCGATTATAGAATATAATGGTTTTCAGATAGTATGTGATCCCAAGAGCCTACTTTTCTTGTTTGGAATGCAATTGGACTACAGCGACGCACTTATTGGTGGGGGCTTTTCTTTCAAGAACCCAAATGCTACACAAACCTGTGGTTGTGGAAAATCGTTTAATGCAGAAATGTAG MAFSSITMKCPPVLHLRALPKSSAPQNSISFHFSPTKFSRRKSLSIRSVSVPGYSTAISLTDNALKHLNKMRSERNEDLCLRIGVRQGGCSGMSYTMEFENRANARPDDSIIEYNGFQIVCDPKSLLFLFGMQLDYSDALIGGGFSFKNPNATQTCGCGKSFNAEM Homology
BLAST of PI0017593.1 vs. ExPASy Swiss-Prot
Match: Q9XIK3 (Iron-sulfur assembly protein IscA, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=ISCA PE=2 SV=2) HSP 1 Score: 223.4 bits (568), Expect = 1.9e-57 Identity = 113/149 (75.84%), Postives = 122/149 (81.88%), Query Frame = 0
BLAST of PI0017593.1 vs. ExPASy Swiss-Prot
Match: P72731 (Uncharacterized protein slr1417 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) OX=1111708 GN=slr1417 PE=3 SV=1) HSP 1 Score: 154.5 bits (389), Expect = 1.1e-36 Identity = 68/105 (64.76%), Postives = 83/105 (79.05%), Query Frame = 0
BLAST of PI0017593.1 vs. ExPASy Swiss-Prot
Match: P51217 (Uncharacterized protein ycf83 OS=Porphyra purpurea OX=2787 GN=ycf83 PE=3 SV=1) HSP 1 Score: 137.9 bits (346), Expect = 1.1e-31 Identity = 59/106 (55.66%), Postives = 82/106 (77.36%), Query Frame = 0
BLAST of PI0017593.1 vs. ExPASy Swiss-Prot
Match: Q1XDR9 (Uncharacterized protein ycf83 OS=Pyropia yezoensis OX=2788 GN=ycf83 PE=3 SV=1) HSP 1 Score: 133.3 bits (334), Expect = 2.6e-30 Identity = 59/106 (55.66%), Postives = 79/106 (74.53%), Query Frame = 0
BLAST of PI0017593.1 vs. ExPASy Swiss-Prot
Match: Q9MSA1 (Uncharacterized protein ycf83 OS=Galdieria sulphuraria OX=130081 GN=ycf83 PE=3 SV=1) HSP 1 Score: 131.0 bits (328), Expect = 1.3e-29 Identity = 58/107 (54.21%), Postives = 81/107 (75.70%), Query Frame = 0
BLAST of PI0017593.1 vs. ExPASy TrEMBL
Match: A0A6J1GEF0 (iron-sulfur assembly protein IscA, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111453419 PE=3 SV=1) HSP 1 Score: 312.8 bits (800), Expect = 8.8e-82 Identity = 157/172 (91.28%), Postives = 161/172 (93.60%), Query Frame = 0
BLAST of PI0017593.1 vs. ExPASy TrEMBL
Match: A0A6J1ISS5 (iron-sulfur assembly protein IscA, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111478089 PE=3 SV=1) HSP 1 Score: 307.8 bits (787), Expect = 2.8e-80 Identity = 155/172 (90.12%), Postives = 159/172 (92.44%), Query Frame = 0
BLAST of PI0017593.1 vs. ExPASy TrEMBL
Match: A0A1S3B105 (iron-sulfur assembly protein IscA, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103484688 PE=3 SV=1) HSP 1 Score: 307.4 bits (786), Expect = 3.7e-80 Identity = 156/172 (90.70%), Postives = 159/172 (92.44%), Query Frame = 0
BLAST of PI0017593.1 vs. ExPASy TrEMBL
Match: A0A0A0KJ66 (Fe-S_biosyn domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G486950 PE=3 SV=1) HSP 1 Score: 297.0 bits (759), Expect = 5.0e-77 Identity = 153/174 (87.93%), Postives = 156/174 (89.66%), Query Frame = 0
BLAST of PI0017593.1 vs. ExPASy TrEMBL
Match: A0A6J1BW61 (iron-sulfur assembly protein IscA, chloroplastic isoform X2 OS=Momordica charantia OX=3673 GN=LOC111005271 PE=3 SV=1) HSP 1 Score: 292.0 bits (746), Expect = 1.6e-75 Identity = 148/171 (86.55%), Postives = 155/171 (90.64%), Query Frame = 0
BLAST of PI0017593.1 vs. NCBI nr
Match: XP_022950286.1 (iron-sulfur assembly protein IscA, chloroplastic-like [Cucurbita moschata] >XP_023544833.1 iron-sulfur assembly protein IscA, chloroplastic-like [Cucurbita pepo subsp. pepo] >KAG6604246.1 Iron-sulfur assembly protein IscA, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 312.8 bits (800), Expect = 1.8e-81 Identity = 157/172 (91.28%), Postives = 161/172 (93.60%), Query Frame = 0
BLAST of PI0017593.1 vs. NCBI nr
Match: KAG7034403.1 (Iron-sulfur assembly protein IscA, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 311.2 bits (796), Expect = 5.3e-81 Identity = 156/172 (90.70%), Postives = 161/172 (93.60%), Query Frame = 0
BLAST of PI0017593.1 vs. NCBI nr
Match: XP_022977954.1 (iron-sulfur assembly protein IscA, chloroplastic-like [Cucurbita maxima]) HSP 1 Score: 307.8 bits (787), Expect = 5.8e-80 Identity = 155/172 (90.12%), Postives = 159/172 (92.44%), Query Frame = 0
BLAST of PI0017593.1 vs. NCBI nr
Match: XP_008440129.1 (PREDICTED: iron-sulfur assembly protein IscA, chloroplastic [Cucumis melo]) HSP 1 Score: 307.4 bits (786), Expect = 7.6e-80 Identity = 156/172 (90.70%), Postives = 159/172 (92.44%), Query Frame = 0
BLAST of PI0017593.1 vs. NCBI nr
Match: XP_038880838.1 (iron-sulfur assembly protein IscA, chloroplastic [Benincasa hispida]) HSP 1 Score: 307.4 bits (786), Expect = 7.6e-80 Identity = 154/172 (89.53%), Postives = 160/172 (93.02%), Query Frame = 0
BLAST of PI0017593.1 vs. TAIR 10
Match: AT1G10500.1 (chloroplast-localized ISCA-like protein ) HSP 1 Score: 223.4 bits (568), Expect = 1.4e-58 Identity = 113/149 (75.84%), Postives = 122/149 (81.88%), Query Frame = 0
BLAST of PI0017593.1 vs. TAIR 10
Match: AT5G03905.1 (Iron-sulphur cluster biosynthesis family protein ) HSP 1 Score: 84.7 bits (208), Expect = 7.5e-17 Identity = 52/158 (32.91%), Postives = 76/158 (48.10%), Query Frame = 0
BLAST of PI0017593.1 vs. TAIR 10
Match: AT2G36260.1 (Iron-sulphur cluster biosynthesis family protein ) HSP 1 Score: 71.2 bits (173), Expect = 8.6e-13 Identity = 34/105 (32.38%), Postives = 61/105 (58.10%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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