PI0017593 (gene) Melon (PI 482460) v1

Overview


Name	PI0017593
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	iron-sulfur assembly protein IscA, chloroplastic-like
Location	chr08: 18928875 .. 18931661 (-)
RNA-Seq Expression	PI0017593
Synteny	PI0017593

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGTTCTCTTCAATTACCATGAAATGCCCCCCCGTCCTTCACTTGCGAGCCCTTCCTAAAAGTTCTGCACCTCAAAATTCAATTTCCTTCCATTTTTCTCCTACGAAATTCAGCCGGAGAAAATCCTTATCGATTCGATCGGTTTCAGTCCCAGGTACGCTAATTTTTAATTTTCCCATCCGTTTTCCTCCTTGTTTTCCCGATATTATACTTGGCTATATCACCTTAGTTCATCGTTGTACTATTTGGAAGGAAATTAATCAGGGTTTTTTTCCCCTTTTGGATTGGATTGAAATTATGAATTTGTGGAGAACGTCTGGATTCGCGTTATTTTTTTAAATCAATCAAAACGCAGGATTCATTTATTGGTTGCTCGTAATCGAAATTGATAGCTGGTGGAAGTCTTTCGTTGAAATTAAGTAACAGAATTTTGGGACTTTAATGTTGATTTTCATGGAAAATAAATTTCCCCTCTACTTGTACTGATGACTTGTTTATGAGTTATAATTCAAGATCCAGTTGGTGATATTCAAACCATGAATTTACGTCTTTGTTTTGTTCTAATGCCTAAATCATTAGGATGGATTGGTCTTCATGTGGAGGCAAAGGTGTTCATTTTTTCTTGTGTTTGATACCTTCGATTGGTTATTTGTTTTAGAGCCTGTTTGGGAGTGGTTTTGAAATGGTTAATCACTTTCTTTCTTGTTCAAAACCACTCCGAATTTGTCTTTAATCATAAAAAAACGATTTAATGTTTGATAATTTCACTTTTAAATGCAATTTCCATATCTTTAAATTTAATTTTGAAGGATTAAAAGCATATTTCAAGTCATTTTGGACAATAAAAACTGATTTTAACCCTTTCAAAATAACTCCGAACATGCACTTAAACATCTTCTGGTGCAAATTATTTTTTGTTTTCTCTATGGCACTTTCCCTTTGCGTGTTACTGCAGATCAAAAGATAAAACCTACTGAATCTTGTCCTACAGTTTTTGCATATGAAACACGATGAGTATATCATGCATTTATGATCAAAGTTTGCCTAGTCATCTTATGTTTTTTGTGATTAAACAGCTGCGCCAGCATCCGAGGGTATAGCACTGCTATCTCATTAACCGATAATGCATTGAAACACTTGAATAAAATGAGATCTGAACGTAATGAAGATTTGTGCTTAAGAATTGGTGTCAGACAGGGTGGATGCTCTGGTATGTCCTACACCATGGAGTTTGAGAACAGGGCAAATGCTAGACCTGATGATTCGATTATAGAATATAATGGTTTTCAGATAGGTAAGAGTTATGGCTTTGCTTTTTTTCACCTTGAATTTCTAGTGAGATTTTACTAGTGATAGTGCAACTGTTTGAAGAAATCCTTTTTTTAATGCATTTTATTGGTAGATAATCCATTGCTTTATATACATACTTTTTTTTGGGGGGCGGGGGGTACTGGAATGTCTAAGTCTTGTTTTGCGCATGTTTTGGATTGATACTGTGGAATGGTTAAGGGCAAGTTTTCAAATTTCCTTAGGATGAAAGAGGCTTACTCTTTTATAGTTTTATACATTCAGATAGTGATGGGTATTTCATGAGCCATATGCCATAAATTTGAAGGACTCTACAAGAATAATTTTTCTCTATAGTTCATAATCTATCTCTTAGCTCCAAAAGAAAATGGTGATATACATAAGTCTAGGTTTGGATATTATTTTTTTTTATGAATCAAACTGCTTTCATTGAGAAAAAATGAAAGAATACAAGGTTTGTACAAAAAAAAACCAGCCCACCAAAACACCCCAATTGACAGAAGGGGGAACCAACTAAGTAAAATGTTACCAATAGAGTAATTACAAAAGTGCTTTGATATCGAAGCCCAAAGGGAAACATGAAATCTAATCAAAGACTAAATCTCACTGTGCTCCCTCTCCCTACCTCTAAAGACCCGGTTGTTCCTCTCACCCCAAATGCCCCAATCAATAGCACACACCCCAGCCAACCATAATAATCCCCCTTAACGACAGTCCCAGAAAAGAAGTCTAGGTTTGCATATTGTTAGATTGATACTTTCTTTCCCGTGGATCGGTAGAGGGCAAGTTTTCAATTTTTATTAGGATAAAAGAAGCTTACATATCATGAGCCACGTGCCATAAGTTTGCTGGACTCTACAAGAAGTTTTACTCTATAGCTCATAATCTATCACTTCTCTTCGACACTCAATGACTTGAATTATTAGATATGAGCAATTTTTTATGCTAACTGGTAAGTAGGTTGCGCTACAACTTTTGTCAAATATATTTTTCTTTAATGCATACTATTCAACATAAAGTTGTATATTGTTTCAATTCCTTGATTCCCAAAGTGAGCATAGTTCAACTGAGTTAGTGATAAAAAAGTTTGTGATTCAAAACAATGAGTCCTCCCACCCTTGTTGTTACTAATGAAAAGAGAGTCCTTGATAATTGCTCTCTACTCTATTGATAAAGGAAAGTAAGCATCTTTTAGTGAACTATGAAAGTATCTTTGTATCTACTTCATTTTCATTTCCTCTATGCCCTTTTAAGTTGTACCCTCGAACACAAATTTAAGTTCACTTTTAGTCTGAACTTCTGATACAAATTTCCCTCTCTTCTTGTTTTGTAGTATGTGATCCCAAGAGCCTACTTTTCTTGTTTGGAATGCAATTGGACTACAGCGACGCACTTATTGGTGGGGGCTTTTCTTTCAAGAACCCAAATGCTACACAAACCTGTGGTTGTGGAAAATCGTTTAATGCAGAAATGTAG

mRNA sequence

ATGGCGTTCTCTTCAATTACCATGAAATGCCCCCCCGTCCTTCACTTGCGAGCCCTTCCTAAAAGTTCTGCACCTCAAAATTCAATTTCCTTCCATTTTTCTCCTACGAAATTCAGCCGGAGAAAATCCTTATCGATTCGATCGGTTTCAGTCCCAGGGTATAGCACTGCTATCTCATTAACCGATAATGCATTGAAACACTTGAATAAAATGAGATCTGAACGTAATGAAGATTTGTGCTTAAGAATTGGTGTCAGACAGGGTGGATGCTCTGGTATGTCCTACACCATGGAGTTTGAGAACAGGGCAAATGCTAGACCTGATGATTCGATTATAGAATATAATGGTTTTCAGATAGTATGTGATCCCAAGAGCCTACTTTTCTTGTTTGGAATGCAATTGGACTACAGCGACGCACTTATTGGTGGGGGCTTTTCTTTCAAGAACCCAAATGCTACACAAACCTGTGGTTGTGGAAAATCGTTTAATGCAGAAATGTAG

Coding sequence (CDS)

ATGGCGTTCTCTTCAATTACCATGAAATGCCCCCCCGTCCTTCACTTGCGAGCCCTTCCTAAAAGTTCTGCACCTCAAAATTCAATTTCCTTCCATTTTTCTCCTACGAAATTCAGCCGGAGAAAATCCTTATCGATTCGATCGGTTTCAGTCCCAGGGTATAGCACTGCTATCTCATTAACCGATAATGCATTGAAACACTTGAATAAAATGAGATCTGAACGTAATGAAGATTTGTGCTTAAGAATTGGTGTCAGACAGGGTGGATGCTCTGGTATGTCCTACACCATGGAGTTTGAGAACAGGGCAAATGCTAGACCTGATGATTCGATTATAGAATATAATGGTTTTCAGATAGTATGTGATCCCAAGAGCCTACTTTTCTTGTTTGGAATGCAATTGGACTACAGCGACGCACTTATTGGTGGGGGCTTTTCTTTCAAGAACCCAAATGCTACACAAACCTGTGGTTGTGGAAAATCGTTTAATGCAGAAATGTAG

Protein sequence

MAFSSITMKCPPVLHLRALPKSSAPQNSISFHFSPTKFSRRKSLSIRSVSVPGYSTAISLTDNALKHLNKMRSERNEDLCLRIGVRQGGCSGMSYTMEFENRANARPDDSIIEYNGFQIVCDPKSLLFLFGMQLDYSDALIGGGFSFKNPNATQTCGCGKSFNAEM

Homology

[Close]

BLAST of PI0017593 vs. ExPASy Swiss-Prot
Match: Q9XIK3 (Iron-sulfur assembly protein IscA, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=ISCA PE=2 SV=2)

HSP 1 Score: 223.4 bits (568), Expect = 1.9e-57
Identity = 113/149 (75.84%), Postives = 122/149 (81.88%), Query Frame = 0


Query: 27  NSISF---HFSPTKFSRRKSLSIRSVSVP------GYSTAISLTDNALKHLNKMRSERNE 86
           NSISF    +     +RR  LS+RS SVP      G   AISL++NALKHL+KMRSER E
Sbjct: 32  NSISFPSLSYVNLNLNRRNRLSVRSASVPAAPAMEGLKPAISLSENALKHLSKMRSERGE 91

Query: 87  DLCLRIGVRQGGCSGMSYTMEFENRANARPDDSIIEYNGFQIVCDPKSLLFLFGMQLDYS 146
           DLCLRIGV+QGGCSGMSYTM+FENRANARPDDS IEY GF IVCDPKS+LFLFGMQLDYS
Sbjct: 92  DLCLRIGVKQGGCSGMSYTMDFENRANARPDDSTIEYQGFTIVCDPKSMLFLFGMQLDYS 151

Query: 147 DALIGGGFSFKNPNATQTCGCGKSFNAEM 167
           DALIGGGFSF NPNATQTCGCGKSF AEM
Sbjct: 152 DALIGGGFSFSNPNATQTCGCGKSFAAEM 180

[Close]

BLAST of PI0017593 vs. ExPASy Swiss-Prot
Match: P72731 (Uncharacterized protein slr1417 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) OX=1111708 GN=slr1417 PE=3 SV=1)

HSP 1 Score: 154.5 bits (389), Expect = 1.1e-36
Identity = 68/105 (64.76%), Postives = 83/105 (79.05%), Query Frame = 0


Query: 58  ISLTDNALKHLNKMRSERNEDLCLRIGVRQGGCSGMSYTMEFENRANARPDDSIIEYNGF 117
           I L+D ALKHL  ++ ++ +DLCLR+GVRQGGCSGMSY M+FE    A   D + +Y GF
Sbjct: 12  IQLSDAALKHLLALKEQQGKDLCLRVGVRQGGCSGMSYMMDFEEPNRATEHDEVFDYEGF 71

Query: 118 QIVCDPKSLLFLFGMQLDYSDALIGGGFSFKNPNATQTCGCGKSF 163
           QI+CD KSLL+L+G+ LDYS+ALIGGGF F NPNA QTCGCGKSF
Sbjct: 72  QIICDRKSLLYLYGLMLDYSNALIGGGFQFTNPNANQTCGCGKSF 116

[Close]

BLAST of PI0017593 vs. ExPASy Swiss-Prot
Match: P51217 (Uncharacterized protein ycf83 OS=Porphyra purpurea OX=2787 GN=ycf83 PE=3 SV=1)

HSP 1 Score: 137.9 bits (346), Expect = 1.1e-31
Identity = 59/106 (55.66%), Postives = 82/106 (77.36%), Query Frame = 0


Query: 58  ISLTDNALKHLNKMRSERNEDLCLRIGVRQGGCSGMSYTMEFENRANARPDDSIIEYNGF 117
           I+LT+ A + +  ++S  + ++CLRIGV+QGGCSGMSY+M FE+ ++ R  D ++  + F
Sbjct: 8   ITLTEPAARQIKILKSNFDNEVCLRIGVKQGGCSGMSYSMNFESVSSLRETDEVLMLDSF 67

Query: 118 QIVCDPKSLLFLFGMQLDYSDALIGGGFSFKNPNATQTCGCGKSFN 164
            + CDPKSLL+L+G+ LDYS  LIGGGF F NPNA+QTCGCGKSF+
Sbjct: 68  LVACDPKSLLYLYGLSLDYSSELIGGGFQFSNPNASQTCGCGKSFS 113

[Close]

BLAST of PI0017593 vs. ExPASy Swiss-Prot
Match: Q1XDR9 (Uncharacterized protein ycf83 OS=Pyropia yezoensis OX=2788 GN=ycf83 PE=3 SV=1)

HSP 1 Score: 133.3 bits (334), Expect = 2.6e-30
Identity = 59/106 (55.66%), Postives = 79/106 (74.53%), Query Frame = 0


Query: 58  ISLTDNALKHLNKMRSERNEDLCLRIGVRQGGCSGMSYTMEFENRANARPDDSIIEYNGF 117
           I++T  ALK +  ++++   D+ LRIGVRQGGCSGMSY+M FE+    +  D  +  + F
Sbjct: 8   ITITKPALKQIAILKNDHENDVHLRIGVRQGGCSGMSYSMNFEHVDKLKDTDERLRLDNF 67

Query: 118 QIVCDPKSLLFLFGMQLDYSDALIGGGFSFKNPNATQTCGCGKSFN 164
            +VCDPKSLL+L+G+ LD+S  LIGGGF F NPNA+QTCGCGKSF+
Sbjct: 68  SVVCDPKSLLYLYGLSLDFSSELIGGGFQFSNPNASQTCGCGKSFS 113

[Close]

BLAST of PI0017593 vs. ExPASy Swiss-Prot
Match: Q9MSA1 (Uncharacterized protein ycf83 OS=Galdieria sulphuraria OX=130081 GN=ycf83 PE=3 SV=1)

HSP 1 Score: 131.0 bits (328), Expect = 1.3e-29
Identity = 58/107 (54.21%), Postives = 81/107 (75.70%), Query Frame = 0


Query: 58  ISLTDNALKHLNKMRSERNED-LCLRIGVRQGGCSGMSYTMEFENRANARPDDSIIEYNG 117
           I++T +AL HLN +    +ED L +RIG++QGGCSG+SY M +E ++N   +D + +Y+ 
Sbjct: 6   INITKSALDHLNSISKLNSEDKLYIRIGIKQGGCSGLSYFMTYEKKSNISDNDLVYDYDN 65

Query: 118 FQIVCDPKSLLFLFGMQLDYSDALIGGGFSFKNPNATQTCGCGKSFN 164
           F +VCD KS+L+L+G+ LDYS +LI GGF F NPNA QTCGCGKSF+
Sbjct: 66  FTLVCDNKSILYLYGISLDYSSSLIDGGFKFLNPNAKQTCGCGKSFS 112

[Close]

BLAST of PI0017593 vs. ExPASy TrEMBL
Match: A0A6J1GEF0 (iron-sulfur assembly protein IscA, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111453419 PE=3 SV=1)

HSP 1 Score: 312.8 bits (800), Expect = 8.8e-82
Identity = 157/172 (91.28%), Postives = 161/172 (93.60%), Query Frame = 0


Query: 1   MAFSSITMKCPPVLHLRALPKSSAPQNSISFHFSPTKFSRRKSLSIRSVSVP------GY 60
           MAFSSITMKCPPVLHLRALPKSSAPQ+SISF +SPTKFSRRK+LSIRSVSVP      G 
Sbjct: 1   MAFSSITMKCPPVLHLRALPKSSAPQSSISFRYSPTKFSRRKTLSIRSVSVPAAPASEGI 60

Query: 61  STAISLTDNALKHLNKMRSERNEDLCLRIGVRQGGCSGMSYTMEFENRANARPDDSIIEY 120
           + AISLTDNALKHLNKMRSERNEDLCLRIGVRQGGCSGMSYTMEFENRANARPDDSIIEY
Sbjct: 61  APAISLTDNALKHLNKMRSERNEDLCLRIGVRQGGCSGMSYTMEFENRANARPDDSIIEY 120

Query: 121 NGFQIVCDPKSLLFLFGMQLDYSDALIGGGFSFKNPNATQTCGCGKSFNAEM 167
           NGF IVCDPKSLLFLFGMQLDYSDALIGGGFSFKNPNATQTCGCGKSF AEM
Sbjct: 121 NGFVIVCDPKSLLFLFGMQLDYSDALIGGGFSFKNPNATQTCGCGKSFAAEM 172

[Close]

BLAST of PI0017593 vs. ExPASy TrEMBL
Match: A0A6J1ISS5 (iron-sulfur assembly protein IscA, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111478089 PE=3 SV=1)

HSP 1 Score: 307.8 bits (787), Expect = 2.8e-80
Identity = 155/172 (90.12%), Postives = 159/172 (92.44%), Query Frame = 0


Query: 1   MAFSSITMKCPPVLHLRALPKSSAPQNSISFHFSPTKFSRRKSLSIRSVSVP------GY 60
           MAFSSITMKCPPVLHLRALPKSSAPQ+SISF +SPTKFSRRK+LSIRSVSVP      G 
Sbjct: 1   MAFSSITMKCPPVLHLRALPKSSAPQSSISFRYSPTKFSRRKTLSIRSVSVPAAPASEGI 60

Query: 61  STAISLTDNALKHLNKMRSERNEDLCLRIGVRQGGCSGMSYTMEFENRANARPDDSIIEY 120
           + AISLTDNALKHLNKMRSERNEDLCLRIGVRQGGCSGMSYTMEFENR NARPDDSIIEY
Sbjct: 61  APAISLTDNALKHLNKMRSERNEDLCLRIGVRQGGCSGMSYTMEFENRENARPDDSIIEY 120

Query: 121 NGFQIVCDPKSLLFLFGMQLDYSDALIGGGFSFKNPNATQTCGCGKSFNAEM 167
           N F IVCDPKSLLFLFGMQLDYSDALIGGGFSFKNPNATQTCGCGKSF AEM
Sbjct: 121 NEFVIVCDPKSLLFLFGMQLDYSDALIGGGFSFKNPNATQTCGCGKSFAAEM 172

[Close]

BLAST of PI0017593 vs. ExPASy TrEMBL
Match: A0A1S3B105 (iron-sulfur assembly protein IscA, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103484688 PE=3 SV=1)

HSP 1 Score: 307.4 bits (786), Expect = 3.7e-80
Identity = 156/172 (90.70%), Postives = 159/172 (92.44%), Query Frame = 0


Query: 1   MAFSSITMKCPPVLHLRALPKSSAPQNSISFHFSPTKFSRRKSLSIRSVSVP------GY 60
           MAFSSITMK PPVLHLRALPKSSAPQ+SISF FSPTKFSR KSLSIRSVSVP        
Sbjct: 1   MAFSSITMKFPPVLHLRALPKSSAPQSSISFRFSPTKFSRSKSLSIRSVSVPAAPASESI 60

Query: 61  STAISLTDNALKHLNKMRSERNEDLCLRIGVRQGGCSGMSYTMEFENRANARPDDSIIEY 120
           + AISLTDNALKHLNKMRSER+EDLCLRIGVRQGGCSGMSYTMEFENRANARPDDSIIEY
Sbjct: 61  APAISLTDNALKHLNKMRSERDEDLCLRIGVRQGGCSGMSYTMEFENRANARPDDSIIEY 120

Query: 121 NGFQIVCDPKSLLFLFGMQLDYSDALIGGGFSFKNPNATQTCGCGKSFNAEM 167
           NGF IVCDPKSLLFLFGMQLDYSDALIGGGFSFKNPNATQTCGCGKSFNAEM
Sbjct: 121 NGFVIVCDPKSLLFLFGMQLDYSDALIGGGFSFKNPNATQTCGCGKSFNAEM 172

[Close]

BLAST of PI0017593 vs. ExPASy TrEMBL
Match: A0A0A0KJ66 (Fe-S_biosyn domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G486950 PE=3 SV=1)

HSP 1 Score: 297.0 bits (759), Expect = 5.0e-77
Identity = 153/174 (87.93%), Postives = 156/174 (89.66%), Query Frame = 0


Query: 1   MAFSSITMK--CPPVLHLRALPKSSAPQNSISFHFSPTKFSRRKSLSIRSVSVP------ 60
           MAFSSI+MK  CPPVLHL ALPKS APQ SISF F  TKFSRRKSLSIRSVSVP      
Sbjct: 1   MAFSSISMKCPCPPVLHLPALPKSYAPQTSISFRFPSTKFSRRKSLSIRSVSVPAAPASE 60

Query: 61  GYSTAISLTDNALKHLNKMRSERNEDLCLRIGVRQGGCSGMSYTMEFENRANARPDDSII 120
           G + AISLTD ALKHLNKMRSERNEDLCLRIGVRQGGCSGMSYTMEFE+RANARPDDSII
Sbjct: 61  GIAPAISLTDTALKHLNKMRSERNEDLCLRIGVRQGGCSGMSYTMEFESRANARPDDSII 120

Query: 121 EYNGFQIVCDPKSLLFLFGMQLDYSDALIGGGFSFKNPNATQTCGCGKSFNAEM 167
           EYNGF IVCDPKSLLFLFGMQLDYSDALIGGGFSFKNPNATQTCGCGKSFNAEM
Sbjct: 121 EYNGFVIVCDPKSLLFLFGMQLDYSDALIGGGFSFKNPNATQTCGCGKSFNAEM 174

[Close]

BLAST of PI0017593 vs. ExPASy TrEMBL
Match: A0A6J1BW61 (iron-sulfur assembly protein IscA, chloroplastic isoform X2 OS=Momordica charantia OX=3673 GN=LOC111005271 PE=3 SV=1)

HSP 1 Score: 292.0 bits (746), Expect = 1.6e-75
Identity = 148/171 (86.55%), Postives = 155/171 (90.64%), Query Frame = 0


Query: 1   MAFSSITMKCPPVLHLRALPKSSAPQNSISFHFSPTKFSRRKSLSIRSVSVP-----GYS 60
           MAFSS TMK P VLHLRALP+SSA Q+SISF +S TKFSRRKSLS+RSVSVP     G +
Sbjct: 1   MAFSSATMKFPSVLHLRALPESSATQSSISFRYSLTKFSRRKSLSVRSVSVPAPTSEGIA 60

Query: 61  TAISLTDNALKHLNKMRSERNEDLCLRIGVRQGGCSGMSYTMEFENRANARPDDSIIEYN 120
            AISLTDNAL HLNKMRS+RNEDLCLRIGVRQGGCSGMSYTMEFENRANARPDDSIIEYN
Sbjct: 61  PAISLTDNALNHLNKMRSDRNEDLCLRIGVRQGGCSGMSYTMEFENRANARPDDSIIEYN 120

Query: 121 GFQIVCDPKSLLFLFGMQLDYSDALIGGGFSFKNPNATQTCGCGKSFNAEM 167
           GF IVCDPKSLLFLFGMQLDYSDALIGGGFSFKNPNATQTCGCGKSF A+M
Sbjct: 121 GFVIVCDPKSLLFLFGMQLDYSDALIGGGFSFKNPNATQTCGCGKSFAADM 171

[Close]

BLAST of PI0017593 vs. NCBI nr
Match: XP_022950286.1 (iron-sulfur assembly protein IscA, chloroplastic-like [Cucurbita moschata] >XP_023544833.1 iron-sulfur assembly protein IscA, chloroplastic-like [Cucurbita pepo subsp. pepo] >KAG6604246.1 Iron-sulfur assembly protein IscA, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 312.8 bits (800), Expect = 1.8e-81
Identity = 157/172 (91.28%), Postives = 161/172 (93.60%), Query Frame = 0


Query: 1   MAFSSITMKCPPVLHLRALPKSSAPQNSISFHFSPTKFSRRKSLSIRSVSVP------GY 60
           MAFSSITMKCPPVLHLRALPKSSAPQ+SISF +SPTKFSRRK+LSIRSVSVP      G 
Sbjct: 1   MAFSSITMKCPPVLHLRALPKSSAPQSSISFRYSPTKFSRRKTLSIRSVSVPAAPASEGI 60

Query: 61  STAISLTDNALKHLNKMRSERNEDLCLRIGVRQGGCSGMSYTMEFENRANARPDDSIIEY 120
           + AISLTDNALKHLNKMRSERNEDLCLRIGVRQGGCSGMSYTMEFENRANARPDDSIIEY
Sbjct: 61  APAISLTDNALKHLNKMRSERNEDLCLRIGVRQGGCSGMSYTMEFENRANARPDDSIIEY 120

Query: 121 NGFQIVCDPKSLLFLFGMQLDYSDALIGGGFSFKNPNATQTCGCGKSFNAEM 167
           NGF IVCDPKSLLFLFGMQLDYSDALIGGGFSFKNPNATQTCGCGKSF AEM
Sbjct: 121 NGFVIVCDPKSLLFLFGMQLDYSDALIGGGFSFKNPNATQTCGCGKSFAAEM 172

[Close]

BLAST of PI0017593 vs. NCBI nr
Match: KAG7034403.1 (Iron-sulfur assembly protein IscA, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 311.2 bits (796), Expect = 5.3e-81
Identity = 156/172 (90.70%), Postives = 161/172 (93.60%), Query Frame = 0


Query: 1   MAFSSITMKCPPVLHLRALPKSSAPQNSISFHFSPTKFSRRKSLSIRSVSVP------GY 60
           MAFSSIT+KCPPVLHLRALPKSSAPQ+SISF +SPTKFSRRK+LSIRSVSVP      G 
Sbjct: 1   MAFSSITVKCPPVLHLRALPKSSAPQSSISFRYSPTKFSRRKTLSIRSVSVPAAPASEGI 60

Query: 61  STAISLTDNALKHLNKMRSERNEDLCLRIGVRQGGCSGMSYTMEFENRANARPDDSIIEY 120
           + AISLTDNALKHLNKMRSERNEDLCLRIGVRQGGCSGMSYTMEFENRANARPDDSIIEY
Sbjct: 61  APAISLTDNALKHLNKMRSERNEDLCLRIGVRQGGCSGMSYTMEFENRANARPDDSIIEY 120

Query: 121 NGFQIVCDPKSLLFLFGMQLDYSDALIGGGFSFKNPNATQTCGCGKSFNAEM 167
           NGF IVCDPKSLLFLFGMQLDYSDALIGGGFSFKNPNATQTCGCGKSF AEM
Sbjct: 121 NGFVIVCDPKSLLFLFGMQLDYSDALIGGGFSFKNPNATQTCGCGKSFAAEM 172

[Close]

BLAST of PI0017593 vs. NCBI nr
Match: XP_022977954.1 (iron-sulfur assembly protein IscA, chloroplastic-like [Cucurbita maxima])

HSP 1 Score: 307.8 bits (787), Expect = 5.8e-80
Identity = 155/172 (90.12%), Postives = 159/172 (92.44%), Query Frame = 0


Query: 1   MAFSSITMKCPPVLHLRALPKSSAPQNSISFHFSPTKFSRRKSLSIRSVSVP------GY 60
           MAFSSITMKCPPVLHLRALPKSSAPQ+SISF +SPTKFSRRK+LSIRSVSVP      G 
Sbjct: 1   MAFSSITMKCPPVLHLRALPKSSAPQSSISFRYSPTKFSRRKTLSIRSVSVPAAPASEGI 60

Query: 61  STAISLTDNALKHLNKMRSERNEDLCLRIGVRQGGCSGMSYTMEFENRANARPDDSIIEY 120
           + AISLTDNALKHLNKMRSERNEDLCLRIGVRQGGCSGMSYTMEFENR NARPDDSIIEY
Sbjct: 61  APAISLTDNALKHLNKMRSERNEDLCLRIGVRQGGCSGMSYTMEFENRENARPDDSIIEY 120

Query: 121 NGFQIVCDPKSLLFLFGMQLDYSDALIGGGFSFKNPNATQTCGCGKSFNAEM 167
           N F IVCDPKSLLFLFGMQLDYSDALIGGGFSFKNPNATQTCGCGKSF AEM
Sbjct: 121 NEFVIVCDPKSLLFLFGMQLDYSDALIGGGFSFKNPNATQTCGCGKSFAAEM 172

[Close]

BLAST of PI0017593 vs. NCBI nr
Match: XP_008440129.1 (PREDICTED: iron-sulfur assembly protein IscA, chloroplastic [Cucumis melo])

HSP 1 Score: 307.4 bits (786), Expect = 7.6e-80
Identity = 156/172 (90.70%), Postives = 159/172 (92.44%), Query Frame = 0


Query: 1   MAFSSITMKCPPVLHLRALPKSSAPQNSISFHFSPTKFSRRKSLSIRSVSVP------GY 60
           MAFSSITMK PPVLHLRALPKSSAPQ+SISF FSPTKFSR KSLSIRSVSVP        
Sbjct: 1   MAFSSITMKFPPVLHLRALPKSSAPQSSISFRFSPTKFSRSKSLSIRSVSVPAAPASESI 60

Query: 61  STAISLTDNALKHLNKMRSERNEDLCLRIGVRQGGCSGMSYTMEFENRANARPDDSIIEY 120
           + AISLTDNALKHLNKMRSER+EDLCLRIGVRQGGCSGMSYTMEFENRANARPDDSIIEY
Sbjct: 61  APAISLTDNALKHLNKMRSERDEDLCLRIGVRQGGCSGMSYTMEFENRANARPDDSIIEY 120

Query: 121 NGFQIVCDPKSLLFLFGMQLDYSDALIGGGFSFKNPNATQTCGCGKSFNAEM 167
           NGF IVCDPKSLLFLFGMQLDYSDALIGGGFSFKNPNATQTCGCGKSFNAEM
Sbjct: 121 NGFVIVCDPKSLLFLFGMQLDYSDALIGGGFSFKNPNATQTCGCGKSFNAEM 172

[Close]

BLAST of PI0017593 vs. NCBI nr
Match: XP_038880838.1 (iron-sulfur assembly protein IscA, chloroplastic [Benincasa hispida])

HSP 1 Score: 307.4 bits (786), Expect = 7.6e-80
Identity = 154/172 (89.53%), Postives = 160/172 (93.02%), Query Frame = 0


Query: 1   MAFSSITMKCPPVLHLRALPKSSAPQNSISFHFSPTKFSRRKSLSIRSVSVP------GY 60
           MAFSSITMKC P+LHLRALP+SSAPQ+SISF +SPTKFSRRKSLSIRSVSVP      G 
Sbjct: 1   MAFSSITMKCTPILHLRALPQSSAPQSSISFRYSPTKFSRRKSLSIRSVSVPAAPATEGI 60

Query: 61  STAISLTDNALKHLNKMRSERNEDLCLRIGVRQGGCSGMSYTMEFENRANARPDDSIIEY 120
           + AISLTDNALKHLNKMRSERNEDLCLRIGVRQGGCSGMSYTMEFENRANARPDDSIIEY
Sbjct: 61  APAISLTDNALKHLNKMRSERNEDLCLRIGVRQGGCSGMSYTMEFENRANARPDDSIIEY 120

Query: 121 NGFQIVCDPKSLLFLFGMQLDYSDALIGGGFSFKNPNATQTCGCGKSFNAEM 167
           NGF IVCDPKSLLFLFGMQLDYSDALIGGGFSFKNPNATQTCGCGKSF AE+
Sbjct: 121 NGFVIVCDPKSLLFLFGMQLDYSDALIGGGFSFKNPNATQTCGCGKSFAAEV 172

[Close]

BLAST of PI0017593 vs. TAIR 10
Match: AT1G10500.1 (chloroplast-localized ISCA-like protein )

HSP 1 Score: 223.4 bits (568), Expect = 1.4e-58
Identity = 113/149 (75.84%), Postives = 122/149 (81.88%), Query Frame = 0


Query: 27  NSISF---HFSPTKFSRRKSLSIRSVSVP------GYSTAISLTDNALKHLNKMRSERNE 86
           NSISF    +     +RR  LS+RS SVP      G   AISL++NALKHL+KMRSER E
Sbjct: 32  NSISFPSLSYVNLNLNRRNRLSVRSASVPAAPAMEGLKPAISLSENALKHLSKMRSERGE 91

Query: 87  DLCLRIGVRQGGCSGMSYTMEFENRANARPDDSIIEYNGFQIVCDPKSLLFLFGMQLDYS 146
           DLCLRIGV+QGGCSGMSYTM+FENRANARPDDS IEY GF IVCDPKS+LFLFGMQLDYS
Sbjct: 92  DLCLRIGVKQGGCSGMSYTMDFENRANARPDDSTIEYQGFTIVCDPKSMLFLFGMQLDYS 151

Query: 147 DALIGGGFSFKNPNATQTCGCGKSFNAEM 167
           DALIGGGFSF NPNATQTCGCGKSF AEM
Sbjct: 152 DALIGGGFSFSNPNATQTCGCGKSFAAEM 180

[Close]

BLAST of PI0017593 vs. TAIR 10
Match: AT5G03905.1 (Iron-sulphur cluster biosynthesis family protein )

HSP 1 Score: 84.7 bits (208), Expect = 7.5e-17
Identity = 52/158 (32.91%), Postives = 76/158 (48.10%), Query Frame = 0


Query: 17  RALPKSSAP-------QNSISFHFSPTKFSRRKSLSIRSVSVPGYSTAISLTDNALKHLN 76
           R+L K  AP       +N    +FS     +  S S  S      +  + L+DN ++ + 
Sbjct: 3   RSLVKRVAPYLAGRIRENHRLLNFSSASAIKEASSSSSSQPESSSNDVVHLSDNCIRRMK 62

Query: 77  KMRSERNEDLCLRIGVRQGGCSGMSYTMEFENRANARPDDSIIEYNGFQIVCDPKSLLFL 136
           +++S   E   LR+GV  GGCSG  Y  E +NR N  PDD + E NG ++V D  S   +
Sbjct: 63  ELQSSEPEKKMLRLGVETGGCSGFQYKFELDNRTN--PDDRVFEKNGVKLVVDNVSYDLV 122

Query: 137 FGMQLDYSDALIGGGFSFK-NPNATQTCGCGKSFNAEM 167
            G  +DY + LI   F    NP+A   C C  SF  ++
Sbjct: 123 KGATIDYEEELIRAAFVVAVNPSAVGGCSCKSSFMVKL 158

[Close]

BLAST of PI0017593 vs. TAIR 10
Match: AT2G36260.1 (Iron-sulphur cluster biosynthesis family protein )

HSP 1 Score: 71.2 bits (173), Expect = 8.6e-13
Identity = 34/105 (32.38%), Postives = 61/105 (58.10%), Query Frame = 0


Query: 58  ISLTDNALKHLNKMRSERNEDLCLRIGVRQGGCSGMSYTMEFENRANARPDDSIIEYNGF 117
           ++L+D A   + ++   + +   LR+ V   GC+G+SY + +         D ++E  G 
Sbjct: 6   LALSDTAAARIRQLLQHQQKPF-LRLAVEAKGCNGLSYVLNYAQEKG--KFDEVVEEKGV 65

Query: 118 QIVCDPKSLLFLFGMQLDYSDALIGGGFSFKNPNATQTCGCGKSF 163
           +I+ DPK+++ + G ++D+ D  +   F F NPNAT+ CGCG+SF
Sbjct: 66  KILVDPKAVMHVIGTEMDFVDDKLRSEFVFVNPNATK-CGCGESF 106

The following BLAST results are available for this feature:

BLAST of PI0017593 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9XIK3	1.9e-57	75.84	Iron-sulfur assembly protein IscA, chloroplastic OS=Arabidopsis thaliana OX=3702...	[more]
P72731	1.1e-36	64.76	Uncharacterized protein slr1417 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) ...	[more]
P51217	1.1e-31	55.66	Uncharacterized protein ycf83 OS=Porphyra purpurea OX=2787 GN=ycf83 PE=3 SV=1	[more]
Q1XDR9	2.6e-30	55.66	Uncharacterized protein ycf83 OS=Pyropia yezoensis OX=2788 GN=ycf83 PE=3 SV=1	[more]
Q9MSA1	1.3e-29	54.21	Uncharacterized protein ycf83 OS=Galdieria sulphuraria OX=130081 GN=ycf83 PE=3 S...	[more]

BLAST of PI0017593 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GEF0	8.8e-82	91.28	iron-sulfur assembly protein IscA, chloroplastic-like OS=Cucurbita moschata OX=3...	[more]
A0A6J1ISS5	2.8e-80	90.12	iron-sulfur assembly protein IscA, chloroplastic-like OS=Cucurbita maxima OX=366...	[more]
A0A1S3B105	3.7e-80	90.70	iron-sulfur assembly protein IscA, chloroplastic OS=Cucumis melo OX=3656 GN=LOC1...	[more]
A0A0A0KJ66	5.0e-77	87.93	Fe-S_biosyn domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G486950...	[more]
A0A6J1BW61	1.6e-75	86.55	iron-sulfur assembly protein IscA, chloroplastic isoform X2 OS=Momordica charant...	[more]

BLAST of PI0017593 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022950286.1	1.8e-81	91.28	iron-sulfur assembly protein IscA, chloroplastic-like [Cucurbita moschata] >XP_0...	[more]
KAG7034403.1	5.3e-81	90.70	Iron-sulfur assembly protein IscA, chloroplastic [Cucurbita argyrosperma subsp. ...	[more]
XP_022977954.1	5.8e-80	90.12	iron-sulfur assembly protein IscA, chloroplastic-like [Cucurbita maxima]	[more]
XP_008440129.1	7.6e-80	90.70	PREDICTED: iron-sulfur assembly protein IscA, chloroplastic [Cucumis melo]	[more]
XP_038880838.1	7.6e-80	89.53	iron-sulfur assembly protein IscA, chloroplastic [Benincasa hispida]	[more]

BLAST of PI0017593 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G10500.1	1.4e-58	75.84	chloroplast-localized ISCA-like protein	[more]
AT5G03905.1	7.5e-17	32.91	Iron-sulphur cluster biosynthesis family protein	[more]
AT2G36260.1	8.6e-13	32.38	Iron-sulphur cluster biosynthesis family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000361	FeS cluster biogenesis	PFAM	PF01521	Fe-S_biosyn	coord: 58..160 e-value: 6.0E-23 score: 81.2
IPR016092	FeS cluster insertion protein	TIGRFAM	TIGR00049	TIGR00049	coord: 58..163 e-value: 7.4E-38 score: 127.0
IPR035903	HesB-like domain superfamily	GENE3D	2.60.300.12		coord: 57..165 e-value: 1.9E-36 score: 126.5
IPR035903	HesB-like domain superfamily	SUPERFAMILY	89360	HesB-like domain	coord: 57..153
None	No IPR available	PANTHER	PTHR47265:SF1	IRON-SULFUR ASSEMBLY PROTEIN ISCA, CHLOROPLASTIC	coord: 1..166
IPR031108	FeS assembly protein IscA, plant/cyanobacteria type	PANTHER	PTHR47265	IRON-SULFUR ASSEMBLY PROTEIN ISCA, CHLOROPLASTIC	coord: 1..166
IPR017870	FeS cluster insertion, C-terminal, conserved site	PROSITE	PS01152	HESB	coord: 145..162

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0017593.1	PI0017593.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016226	iron-sulfur cluster assembly
cellular_component	GO:0009570	chloroplast stroma
molecular_function	GO:0051536	iron-sulfur cluster binding
molecular_function	GO:0030674	protein-macromolecule adaptor activity