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Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. TTGGGGTTAGGCTTCATTGCGCGCGTGTATAGCTTTAGAAGCGTGGGAGTTTATGGCGGGGCCAATTGCGGCTCAGCTCGGCTCGGCTTGAGCCAAAACAAATATTTGGTCGCTGCGGCTATGATTTCAGACATGGGCCTCCTTCAGCAACTGCCGGCTCATTCGGCGGTCTAATTGATGGAAATCCGATCGTATCTCTTTTTCTC mRNA sequence TTGGGGTTAGGCTTCATTGCGCGCGTGTATAGCTTTAGAAGCGTGGGAGTTTATGGCGGGGCCAATTGCGGCTCAGCTCGGCTCGGCTTGAGCCAAAACAAATATGGTCGCTGCGGCTATGATTTCAGACATGGGCCTCCTTCAGCAACTGCCGGCTCATTCGGCGGTCTAATTGATGGAAATCCGATCGTATCTCTTTTTCTC Coding sequence (CDS) TTGGGGTTAGGCTTCATTGCGCGCGTGTATAGCTTTAGAAGCGTGGGAGTTTATGGCGGGGCCAATTGCGGCTCAGCTCGGCTCGGCTTGAGCCAAAACAAATATGGTCGCTGCGGCTATGATTTCAGACATGGGCCTCCTTCAGCAACTGCCGGCTCATTCGGCGGTCTAATTGATGGAAATCCGATCGTATCTCTTTTTCTC Protein sequence LGLGFIARVYSFRSVGVYGGANCGSARLGLSQNKYGRCGYDFRHGPPSATAGSFGGLIDGNPIVSLFL
Homology
BLAST of MS016719.1 vs. NCBI nr
Match: KGN58779.1 (hypothetical protein Csa_000887 [Cucumis sativus]) HSP 1 Score: 74.7 bits (182), Expect = 3.4e-10 Identity = 41/71 (57.75%), Postives = 48/71 (67.61%), Query Frame = 0 Query: 1 LGLGFIARVYSFRSVGV---YGGANCGSARLGLSQNKY-GRCGYDFRHGPPSATAGSFGG 60 +G+G I RV SFRSV YG GS+R+ + +NKY GRCGYDF GP TAGSFG Sbjct: 1 MGVGLITRVNSFRSVESCIGYGWVGVGSSRICICKNKYFGRCGYDFGDGPRPETAGSFGT 60
Query: 61 LIDGNPIVSLF 68 LIDGN +VS F Sbjct: 61 LIDGNSVVSFF 71
BLAST of MS016719.1 vs. ExPASy TrEMBL
Match: A0A0A0LCV2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G731890 PE=4 SV=1) HSP 1 Score: 74.7 bits (182), Expect = 1.7e-10 Identity = 41/71 (57.75%), Postives = 48/71 (67.61%), Query Frame = 0 Query: 1 LGLGFIARVYSFRSVGV---YGGANCGSARLGLSQNKY-GRCGYDFRHGPPSATAGSFGG 60 +G+G I RV SFRSV YG GS+R+ + +NKY GRCGYDF GP TAGSFG Sbjct: 1 MGVGLITRVNSFRSVESCIGYGWVGVGSSRICICKNKYFGRCGYDFGDGPRPETAGSFGT 60
Query: 61 LIDGNPIVSLF 68 LIDGN +VS F Sbjct: 61 LIDGNSVVSFF 71
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
KGN58779.1 | 3.4e-10 | 57.75 | hypothetical protein Csa_000887 [Cucumis sativus] | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A0A0LCV2 | 1.7e-10 | 57.75 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G731890 PE=4 SV=1 | [more] |
Match Name | E-value | Identity | Description | |
Relationships
This mRNA is a part of the following gene feature(s):
Feature Name | Unique Name | Type |
MS016719 | MS016719 | gene |
The following CDS feature(s) are a part of this mRNA:
Feature Name | Unique Name | Type |
MS016719.1-cds | MS016719.1-cds-scaffold563:305328..305432 | CDS |
MS016719.1-cds | MS016719.1-cds-scaffold563:305435..305533 | CDS |
The following polypeptide feature(s) derives from this mRNA:
Feature Name | Unique Name | Type |
MS016719.1 | MS016719.1-protein | polypeptide |
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