MELO3C008562.1 (mRNA) Melon (DHL92) v4
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AGATCGAACAACACAAGACTTCGTGATGTAGTAGATGATCCACAACAAGTCCTTGATATATGTAATAATAATAAGAGGTACATGGAGAAGATACATAATATGTACGATCTACCTATTGTACCTCCACCAGTTCATAGGGGACGTGTTCGAGTGGAAGAAACTGAACTCGATGAAGTTTACCATAATGTAGAAGAAGTGCCTCCTACAACACAAACACAGAGCCAAACTGGTTATGGTAGTCTGATGACGATGATGCCAACATTTGGAGCAGGATATTGTGATTCTGAGTTCGGTACAGGATATTATGATGCAGGGGTCGGTCCATCTTATTCTTACATGCATGGACATGGACGTGGCTATGGGGAACATAACGAATATCTGTATCATGAAGCACCTACAGATGTATCAGATCGACAATAGTACCAACAAGAACCAAAGAACCAAGAGGACCAAGAACAACATAGAGTTCAGAGTCGACGTCGACAACCAACTTGAAATCGACGACGTCCGAGTTGTGGAACACATTGA AGATCGAACAACACAAGACTTCGTGATGTAGTAGATGATCCACAACAAGTCCTTGATATATGTAATAATAATAAGAGGTACATGGAGAAGATACATAATATGTACGATCTACCTATTGTACCTCCACCAGTTCATAGGGGACGTGTTCGAGTGGAAGAAACTGAACTCGATGAAGTTTACCATAATGTAGAAGAAGTGCCTCCTACAACACAAACACAGAGCCAAACTGGTTATGAGTTCGGTACAGGATATTATGATGCAGGGGTCGGTCCATCTTATTCTTACATGCATGGACATGGACGTGGCTATGGGGAACATAACGAATATCTGTATCATGAAGCACCTACAGATGTATCAGATCGACAATAGTACCAACAAGAACCAAAGAACCAAGAGGACCAAGAACAACATAGAGTTCAGAGTCGACGTCGACAACCAACTTGAAATCGACGACGTCCGAGTTGTGGAACACATTGA ATGGAGAAGATACATAATATGTACGATCTACCTATTGTACCTCCACCAGTTCATAGGGGACGTGTTCGAGTGGAAGAAACTGAACTCGATGAAGTTTACCATAATGTAGAAGAAGTGCCTCCTACAACACAAACACAGAGCCAAACTGGTTATGAGTTCGGTACAGGATATTATGATGCAGGGGTCGGTCCATCTTATTCTTACATGCATGGACATGGACGTGGCTATGGGGAACATAACGAATATCTGTATCATGAAGCACCTACAGATGTATCAGATCGACAATAG MEKIHNMYDLPIVPPPVHRGRVRVEETELDEVYHNVEEVPPTTQTQSQTGYEFGTGYYDAGVGPSYSYMHGHGRGYGEHNEYLYHEAPTDVSDRQ Homology
BLAST of MELO3C008562.1 vs. NCBI nr
Match: KAA0062642.1 (mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]) HSP 1 Score: 161.0 bits (406), Expect = 5.1e-36 Identity = 85/121 (70.25%), Postives = 87/121 (71.90%), Query Frame = 0
BLAST of MELO3C008562.1 vs. NCBI nr
Match: TYK23842.1 (serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa]) HSP 1 Score: 160.6 bits (405), Expect = 6.6e-36 Identity = 85/121 (70.25%), Postives = 87/121 (71.90%), Query Frame = 0
BLAST of MELO3C008562.1 vs. NCBI nr
Match: TYK01176.1 (GATA zinc finger domain-containing protein 10-like isoform X2 [Cucumis melo var. makuwa]) HSP 1 Score: 160.2 bits (404), Expect = 8.6e-36 Identity = 85/121 (70.25%), Postives = 87/121 (71.90%), Query Frame = 0
BLAST of MELO3C008562.1 vs. NCBI nr
Match: KAA0049532.1 (GATA zinc finger domain-containing protein 10-like isoform X2 [Cucumis melo var. makuwa] >TYK16210.1 GATA zinc finger domain-containing protein 10-like isoform X2 [Cucumis melo var. makuwa]) HSP 1 Score: 156.0 bits (393), Expect = 1.6e-34 Identity = 83/115 (72.17%), Postives = 83/115 (72.17%), Query Frame = 0
BLAST of MELO3C008562.1 vs. NCBI nr
Match: KAA0064245.1 (GATA zinc finger domain-containing protein 10-like isoform X2 [Cucumis melo var. makuwa] >TYK18615.1 GATA zinc finger domain-containing protein 10-like isoform X2 [Cucumis melo var. makuwa]) HSP 1 Score: 156.0 bits (393), Expect = 1.6e-34 Identity = 81/120 (67.50%), Postives = 87/120 (72.50%), Query Frame = 0
BLAST of MELO3C008562.1 vs. ExPASy TrEMBL
Match: A0A5A7V342 (Mediator of RNA polymerase II transcription subunit 12-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold79G001560 PE=4 SV=1) HSP 1 Score: 161.0 bits (406), Expect = 2.4e-36 Identity = 85/121 (70.25%), Postives = 87/121 (71.90%), Query Frame = 0
BLAST of MELO3C008562.1 vs. ExPASy TrEMBL
Match: A0A5D3DJV7 (Serine/threonine-protein phosphatase 7 long form-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold419G00060 PE=4 SV=1) HSP 1 Score: 160.6 bits (405), Expect = 3.2e-36 Identity = 85/121 (70.25%), Postives = 87/121 (71.90%), Query Frame = 0
BLAST of MELO3C008562.1 vs. ExPASy TrEMBL
Match: A0A5D3BSG8 (GATA zinc finger domain-containing protein 10-like isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold2044G00130 PE=4 SV=1) HSP 1 Score: 160.2 bits (404), Expect = 4.2e-36 Identity = 85/121 (70.25%), Postives = 87/121 (71.90%), Query Frame = 0
BLAST of MELO3C008562.1 vs. ExPASy TrEMBL
Match: A0A5D3CXX3 (GATA zinc finger domain-containing protein 10-like isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold209G001390 PE=4 SV=1) HSP 1 Score: 156.0 bits (393), Expect = 7.9e-35 Identity = 83/115 (72.17%), Postives = 83/115 (72.17%), Query Frame = 0
BLAST of MELO3C008562.1 vs. ExPASy TrEMBL
Match: A0A5A7VEC1 (GATA zinc finger domain-containing protein 10-like isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold119G001470 PE=4 SV=1) HSP 1 Score: 156.0 bits (393), Expect = 7.9e-35 Identity = 81/120 (67.50%), Postives = 87/120 (72.50%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
|