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MELO3C007318.jh1.t1 (mRNA) Melon (Harukei-3) v1.41
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptidestart_codonstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.TCAAAACCCTTCACTTCCTCACAATATCTAACATTCTAAATCCTCCACTACTCATGGCCGGTCACAGAAGCGACTACATCACCGGCGCCGCCTACTCTCCCAGGGCTTCTGCCCGTCCCATTCCCAAGCGAGGACAGGTCAAATTGGGGATTATGGTGGGTCTTGCCCACACCGTTGCCTCTATCTTCTCACCCACCACTCGTCGGACCTAGACTACAAGGCGGCCAGCGGTGGCTCTCACACTGAACCGCCCGGCCCGACCCGGCTCACCCTTTTTTCCTTTTCTTTTTCCCCTTTTCATGAGTTTGATGATGGAAGAGAAGAAACGGCATGGAGAGATTGGAGAGTCTCGGAGCTGTTTTGGTCTCTTTTTGTAAAAACAATTTTTCTTTTTTCTTTTTTCTTTTTTCAATTAATGGGAAAAAAAAAGGGAGATTTCCTTCTCTATTTATGA TCAAAACCCTTCACTTCCTCACAATATCTAACATTCTAAATCCTCCACTACTCATGGCCGGTCACAGAAGCGACTACATCACCGGCGCCGCCTACTCTCCCAGGGCTTCTGCCCGTCCCATTCCCAAGCGAGGACAGGTCAAATTGGGGATTATGGTGGGTCTTGCCCACACCGTTGCCTCTATCTTCTCACCCACCACTCGTCGGACCTAGACTACAAGGCGGCCAGCGGTGGCTCTCACACTGAACCGCCCGGCCCGACCCGGCTCACCCTTTTTTCCTTTTCTTTTTCCCCTTTTCATGAGTTTGATGATGGAAGAGAAGAAACGGCATGGAGAGATTGGAGAGTCTCGGAGCTGTTTTGGTCTCTTTTTGTAAAAACAATTTTTCTTTTTTCTTTTTTCTTTTTTCAATTAATGGGAAAAAAAAAGGGAGATTTCCTTCTCTATTTATGA ATGGCCGGTCACAGAAGCGACTACATCACCGGCGCCGCCTACTCTCCCAGGGCTTCTGCCCGTCCCATTCCCAAGCGAGGACAGGTCAAATTGGGGATTATGGTGGGTCTTGCCCACACCGTTGCCTCTATCTTCTCACCCACCACTCGTCGGACCTAG MAGHRSDYITGAAYSPRASARPIPKRGQVKLGIMVGLAHTVASIFSPTTRRT Homology
BLAST of MELO3C007318.jh1.t1 vs. NCBI nr
Match: KAA0052718.1 (hypothetical protein E6C27_scaffold120G003310 [Cucumis melo var. makuwa]) HSP 1 Score: 106 bits (265), Expect = 1.28e-28 Identity = 52/52 (100.00%), Postives = 52/52 (100.00%), Query Frame = 0
BLAST of MELO3C007318.jh1.t1 vs. NCBI nr
Match: KGN49191.1 (hypothetical protein Csa_004352 [Cucumis sativus]) HSP 1 Score: 93.2 bits (230), Expect = 1.32e-23 Identity = 46/52 (88.46%), Postives = 47/52 (90.38%), Query Frame = 0
BLAST of MELO3C007318.jh1.t1 vs. NCBI nr
Match: XP_022977341.1 (uncharacterized protein LOC111477692 [Cucurbita maxima]) HSP 1 Score: 87.0 bits (214), Expect = 4.28e-20 Identity = 42/50 (84.00%), Postives = 45/50 (90.00%), Query Frame = 0
BLAST of MELO3C007318.jh1.t1 vs. NCBI nr
Match: KAG2689810.1 (hypothetical protein I3760_09G156900 [Carya illinoinensis] >KAG6696674.1 hypothetical protein I3842_09G159900 [Carya illinoinensis]) HSP 1 Score: 70.1 bits (170), Expect = 1.86e-14 Identity = 35/49 (71.43%), Postives = 39/49 (79.59%), Query Frame = 0
BLAST of MELO3C007318.jh1.t1 vs. NCBI nr
Match: KAG6642713.1 (hypothetical protein CIPAW_09G159600 [Carya illinoinensis] >KAG6696673.1 hypothetical protein I3842_09G159800 [Carya illinoinensis]) HSP 1 Score: 67.8 bits (164), Expect = 1.53e-13 Identity = 34/49 (69.39%), Postives = 38/49 (77.55%), Query Frame = 0
BLAST of MELO3C007318.jh1.t1 vs. ExPASy TrEMBL
Match: A0A5A7UBX7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold120G003310 PE=4 SV=1) HSP 1 Score: 106 bits (265), Expect = 6.22e-29 Identity = 52/52 (100.00%), Postives = 52/52 (100.00%), Query Frame = 0
BLAST of MELO3C007318.jh1.t1 vs. ExPASy TrEMBL
Match: A0A0A0KN78 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G516990 PE=4 SV=1) HSP 1 Score: 93.2 bits (230), Expect = 6.38e-24 Identity = 46/52 (88.46%), Postives = 47/52 (90.38%), Query Frame = 0
BLAST of MELO3C007318.jh1.t1 vs. ExPASy TrEMBL
Match: A0A6J1IJM3 (uncharacterized protein LOC111477692 OS=Cucurbita maxima OX=3661 GN=LOC111477692 PE=4 SV=1) HSP 1 Score: 87.0 bits (214), Expect = 2.07e-20 Identity = 42/50 (84.00%), Postives = 45/50 (90.00%), Query Frame = 0
BLAST of MELO3C007318.jh1.t1 vs. ExPASy TrEMBL
Match: A0A5J5VQ30 (Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=ES319_A05G172400v1 PE=4 SV=1) HSP 1 Score: 67.8 bits (164), Expect = 8.75e-14 Identity = 30/51 (58.82%), Postives = 40/51 (78.43%), Query Frame = 0
BLAST of MELO3C007318.jh1.t1 vs. ExPASy TrEMBL
Match: A0A5D2UXY7 (Uncharacterized protein OS=Gossypium mustelinum OX=34275 GN=E1A91_D05G178200v1 PE=4 SV=1) HSP 1 Score: 67.8 bits (164), Expect = 8.75e-14 Identity = 30/51 (58.82%), Postives = 40/51 (78.43%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following stop_codon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following start_codon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
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